Animal-Genome cDNA Clone 20030531/20030531C-0/20030531C-003703


Query

>20030531C-003703 (20030531C-003703) 20030531C-003703
AGTCTGTTGG CTGCGGCAGC AGGTAGCAAA GTGACCCTGA GGACTTGAGT
GCTCCGGTAG CCCCCGCGGC TGGAGAGTGA GCAGTTACCA TGGACGGGTT
CCGTATATTC ACTTCAGATA ATTACACAGA GGATGACTTG GGCTCAGGTG
ACTATGACTC CATAAAGGAA CCCTGTTTCC GGGAGGAAAA TGCCCATTTC
AACCGAATCT TTCTGCCCAC TGTCTACTCC ATCATCTTCT TAACTGGCAT
AGTGGGTAAT GGATTGGTCA TCCTGGTCAT GGGTTACCAG AAGAAACTGA
GAAGCATGAC GGACAAGTAC AGACTGCACC TGTCTGTGGC AGACCTTCTC
TTTGTCCTCA CACTTCCCTT CTGGGCAGTT GATGCCGTGG CAAACTGGTA
CTTTGGGAAG TTTCTGTGCA AGGCAGTCCA TGTCATCTAT ACTGTCAATC
TCTACAGCAG TGTGCTCATC CTGGCCTTCA TCAGTCTGGA CCGGTACCTG
GCTATCGTCC ATGCCACCAA CAGTCAGAGG CCAAGGAAGC TATTGGCTGA
AAAAGTGGTC TATGTCGGCG TCTGGATACC TGCCCTCCTG TTGACTATTC
CTGATTTCAT CTTTGCGAAT GTCAGGGAGG GGGATGGGAG GTACATCTGT
GACCGCTTCT ACCCCAATGA CCTGTGGTTA GTGGTGTTCC AGTTTCAGCA
CATCATGGTT GGCCTTATCC TGCCGGGTAT TGTCATCCTA TCTTGCTATT
GCATCATCAT CTCCAAGCTG TCCCACTCCA AGGGCTATCA GAAGCGCAAA
GCTCTCAAAA CCACCGTTAT CCTCATCCTG GCTTTCTTCG CCTGCTGGCT
GCCATACTAC ATCGGGATCA GCATCGACTC CTTCATCCTC CTGGAAATCA
TCCAGCAAGG GTGTGAGTTT GAGAGCACTG TGCACAAGTG GATTTCCATC
ACTGAGGCCC TTGCCTTTTT CCACTGTTGC CTGAATCCTA TCCTCTACGC
TTTCCTTGGA GCCAAATTTA AAACCTCTGC CCAGCACGCA CTCACCTCTG
TGAGCAGAGG GTCCAGCCTA AAGATCCTCT

Search to RefSeq (Human) database

Query= 20030531C-003703 (20030531C-003703) 20030531C-003703
         (1080 letters)

Database: RefSeq (Homo Sapiens/Amino Acid)
           19,244 sequences; 10,046,356 total letters

Searching..................................................done

                                                                               Score     E
            Sequences producing significant alignments:                        (bits)  Value

Alignment   gi|4503175|ref|NP_003458.1| (NM_003467) chemokine (C-X-C motif)...   631  0.0
Alignment   gi|5031627|ref|NP_005499.1| (NM_005508) chemokine (C-C motif) r...   233  1e-61
Alignment   gi|4504099|ref|NP_001495.1| (NM_001504) chemokine (C-X-C motif)...   224  1e-58
Alignment   gi|4502641|ref|NP_001829.1| (NM_001838) chemokine (C-C motif) r...   215  4e-56
Alignment   gi|4504681|ref|NP_000625.1| (NM_000634) interleukin 8 receptor ...   215  5e-56
Alignment   gi|14043042|ref|NP_112477.1| (NM_031200) chemokine (C-C motif) ...   213  2e-55
Alignment   gi|14043044|ref|NP_006632.2| (NM_006641) chemokine (C-C motif) ...   213  2e-55
Alignment   gi|4504683|ref|NP_001548.1| (NM_001557) interleukin 8 receptor ...   212  4e-55
Alignment   gi|14589869|ref|NP_116743.1| (NM_032966) Burkitt lymphoma recep...   207  1e-53
Alignment   gi|4502415|ref|NP_001707.1| (NM_001716) Burkitt lymphoma recept...   207  1e-53


>gi|4503175|ref|NP_003458.1| (NM_003467) chemokine (C-X-C motif)
            receptor 4; Neuropeptide Y receptor Y3; chemokine (C-X-C
            motif), receptor 4 (fusin) [Homo sapiens]
          Length = 352

 Score =  631 bits (1627), Expect = 0.0
 Identities = 310/330 (93%), Positives = 323/330 (96%)
 Frame = +3

Query: 90   MDGFRIFTSDNYTEDDLGSGDYDSIKEPCFREENAHFNRIFLPTVYSIIFLTGIVGNGLV 269
            M+G  I+TSDNYTE+ +GSGDYDS+KEPCFREENA+FN+IFLPT+YSIIFLTGIVGNGLV
Sbjct: 1    MEGISIYTSDNYTEE-MGSGDYDSMKEPCFREENANFNKIFLPTIYSIIFLTGIVGNGLV 59

Query: 270  ILVMGYQKKLRSMTDKYRLHLSVADLLFVLTLPFWAVDAVANWYFGKFLCKAVHVIYTVN 449
            ILVMGYQKKLRSMTDKYRLHLSVADLLFV+TLPFWAVDAVANWYFG FLCKAVHVIYTVN
Sbjct: 60   ILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIYTVN 119

Query: 450  LYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVRE 629
            LYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANV E
Sbjct: 120  LYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSE 179

Query: 630  GDGRYICDRFYPNDLWLVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGYQKRKALK 809
             D RYICDRFYPNDLW+VVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKG+QKRKALK
Sbjct: 180  ADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGHQKRKALK 239

Query: 810  TTVILILAFFACWLPYYIGISIDSFILLEIIQQGCEFESTVHKWISITEALAFFHCCLNP 989
            TTVILILAFFACWLPYYIGISIDSFILLEII+QGCEFE+TVHKWISITEALAFFHCCLNP
Sbjct: 240  TTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNP 299

Query: 990  ILYAFLGAKFKTSAQHALTSVSRGSSLKIL 1079
            ILYAFLGAKFKTSAQHALTSVSRGSSLKIL
Sbjct: 300  ILYAFLGAKFKTSAQHALTSVSRGSSLKIL 329



>gi|5031627|ref|NP_005499.1| (NM_005508) chemokine (C-C motif)
            receptor 4; chemokine (C-C) receptor 4 [Homo sapiens]
          Length = 360

 Score =  233 bits (595), Expect = 1e-61
 Identities = 117/292 (40%), Positives = 174/292 (59%), Gaps = 2/292 (0%)
 Frame = +3

Query: 153  YDSIKEPCFREENAHFNRIFLPTVYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHL 332
            Y+SI +PC +E    F  +FLP +YS++F+ G++GN +V+LV+   K+LRSMTD Y L+L
Sbjct: 22   YESIPKPCTKEGIKAFGELFLPPLYSLVFVFGLLGNSVVVLVLFKYKRLRSMTDVYLLNL 81

Query: 333  SVADLLFVLTLPFWAVDAVANWYFGKFLCKAVHVIYTVNLYSSVLILAFISLDRYLAIVH 512
            +++DLLFV +LPFW   A   W FG  LCK +  +Y V  YS +  +  +S+DRYLAIVH
Sbjct: 82   AISDLLFVFSLPFWGYYAADQWVFGLGLCKMISWMYLVGFYSGIFFVMLMSIDRYLAIVH 141

Query: 513  ATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVREGDGRYICDRFYP--NDLWLVV 686
            A  S R R L    +  +  W  A+  ++P F+F+          C   Y   +  W V+
Sbjct: 142  AVFSLRARTLTYGVITSLATWSVAVFASLPGFLFSTCYTERNHTYCKTKYSLNSTTWKVL 201

Query: 687  FQFQHIMVGLILPGIVILSCYCIIISKLSHSKGYQKRKALKTTVILILAFFACWLPYYIG 866
               +  ++GL++P  ++L CY +II  L H K  +K KA+K    +++ F   W PY I
Sbjct: 202  SSLEINILGLVIPLGIMLFCYSMIIRTLQHCKNEKKNKAVKMIFAVVVLFLGFWTPYNIV 261

Query: 867  ISIDSFILLEIIQQGCEFESTVHKWISITEALAFFHCCLNPILYAFLGAKFK 1022
            + +++ + LE++Q  C FE  +   I  TE LAF HCCLNPI+Y FLG KF+
Sbjct: 262  LFLETLVELEVLQD-CTFERYLDYAIQATETLAFVHCCLNPIIYFFLGEKFR 312



>gi|4504099|ref|NP_001495.1| (NM_001504) chemokine (C-X-C motif)
            receptor 3; chemokine (C-X-C) receptor 3; IP10 receptor;
            Mig receptor; G protein-coupled receptor 9 [Homo sapiens]
          Length = 368

 Score =  224 bits (570), Expect = 1e-58
 Identities = 115/300 (38%), Positives = 173/300 (57%), Gaps = 4/300 (1%)
 Frame = +3

Query: 135  DLGSGDYDSI--KEPCFREENAHFNRIFLPTVYSIIFLTGIVGNGLVILVMGYQKKLRSM 308
            D G  + DS     PC ++ + +F+R FLP +YS++FL G++GNG V  V+  ++   S
Sbjct: 28   DYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVLLSRRTALSS 87

Query: 309  TDKYRLHLSVADLLFVLTLPFWAVDAVANWYFGKFLCKAVHVIYTVNLYSSVLILAFISL 488
            TD + LHL+VAD L VLTLP WAVDA   W FG  LCK    ++ +N Y+  L+LA IS
Sbjct: 88   TDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNINFYAGALLLACISF 147

Query: 489  DRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVREGD--GRYICDRFY 662
            DRYL IVHAT   R        +  + VW   LL  +PDFIF +    +      C   +
Sbjct: 148  DRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAHHDERLNATHCQYNF 207

Query: 663  PNDLWLVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGYQKRKALKTTVILILAFFA 842
            P  +     +   ++ G +LP +V+  CY  I++ L  S+G ++ +A++  V++++AF
Sbjct: 208  P-QVGRTALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFAL 266

Query: 843  CWLPYYIGISIDSFILLEIIQQGCEFESTVHKWISITEALAFFHCCLNPILYAFLGAKFK 1022
            CW PY++ + +D  + L  + + C  ES V    S+T  L + HCCLNP+LYAF+G KF+
Sbjct: 267  CWTPYHLVVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFR 326



>gi|4502641|ref|NP_001829.1| (NM_001838) chemokine (C-C motif)
            receptor 7 precursor; Epstein-Barr virus induced gene 1;
            lymphocyte-specific G protein-coupled peptide receptor;
            chemokine (C-C) receptor 7; C-C chemokine receptor type
            7; Epstein-Barr virus induced G-protein coupled receptor;
            MIP-3 beta receptor; EBV-induced G protein-coupled
            receptor 1 [Homo sapiens]
          Length = 378

 Score =  215 bits (548), Expect = 4e-56
 Identities = 109/309 (35%), Positives = 178/309 (57%), Gaps = 7/309 (2%)
 Frame = +3

Query: 117  DNYTEDDLGSG---DYDSIKEPCFREENAHFNRIFLPTVYSIIFLTGIVGNGLVILVMGY 287
            D  T+D +G     DY   +  C +++  +F   FLP +YSII   G++GNGLV+L   Y
Sbjct: 26   DEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWFLPIMYSIICFVGLLGNGLVVLTYIY 85

Query: 288  QKKLRSMTDKYRLHLSVADLLFVLTLPFWAVDAVANWYFGKFLCKAVHVIYTVNLYSSVL 467
             K+L++MTD Y L+L+VAD+LF+LTLPFWA  A  +W FG   CK +  IY ++ +S +L
Sbjct: 86   FKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAKSWVFGVHFCKLIFAIYKMSFFSGML 145

Query: 468  ILAFISLDRYLAIVHATNS--QRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVREGDGR 641
            +L  IS+DRY+AIV A ++   R R LL  K+  VG+WI A +L+IP+ ++++++
Sbjct: 146  LLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCVGIWILATVLSIPELLYSDLQRSSSE 205

Query: 642  YI--CDRFYPNDLWLVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGYQKRKALKTT 815
                C     +    +  Q   +++G ++P + +  CY +II  L  ++ +++ KA+K
Sbjct: 206  QAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMSFCYLVIIRTLLQARNFERNKAIKVI 265

Query: 816  VILILAFFACWLPYYIGISIDSFILLEIIQQGCEFESTVHKWISITEALAFFHCCLNPIL 995
            + +++ F    LPY   +   +     I    CE    ++    +T +LA   CC+NP L
Sbjct: 266  IAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCELSKQLNIAYDVTYSLACVRCCVNPFL 325

Query: 996  YAFLGAKFK 1022
            YAF+G KF+
Sbjct: 326  YAFIGVKFR 334



>gi|4504681|ref|NP_000625.1| (NM_000634) interleukin 8 receptor alpha;
            chemokine (C-X-C) receptor 1; high affinity interleukin-8
            receptor A; IL-8 receptor type 1; interleukin-8 receptor
            type 1; interleukin-8 receptor type A; IL-8 receptor
            [Homo sapiens]
          Length = 350

 Score =  215 bits (547), Expect = 5e-56
 Identities = 122/317 (38%), Positives = 176/317 (55%), Gaps = 11/317 (3%)
 Frame = +3

Query: 132  DDL---GSGDYDSIKEPCFREENAHFNRIFLPTVYSIIFLTGIVGNGLVILVMGYQKKLR 302
            DDL   G    D    PC  E     N+  +   Y+++FL  ++GN LV+LV+ Y +  R
Sbjct: 13   DDLNFTGMPPADEDYSPCMLETET-LNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGR 71

Query: 303  SMTDKYRLHLSVADLLFVLTLPFWAVDAVANWYFGKFLCKAVHVIYTVNLYSSVLILAFI 482
            S+TD Y L+L++ADLLF LTLP WA   V  W FG FLCK V ++  VN YS +L+LA I
Sbjct: 72   SVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACI 131

Query: 483  SLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANV-REGDGRYICDRF 659
            S+DRYLAIVHAT +   ++ L  K V +G W  ++ L++P F+F       +   +C
Sbjct: 132  SVDRYLAIVHATRTLTQKRHLV-KFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEV 190

Query: 660  YPNDL--WLVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGYQKRKALKTTVILILA 833
              ND   W +V +      G I+P  V+L CY   +  L  +   QK +A++    ++L
Sbjct: 191  LGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQKHRAMRVIFAVVLI 250

Query: 834  FFACWLPYYIGISIDSFILLEIIQQGCEFESTVHKWISITEALAFFHCCLNPILYAFLGA 1013
            F  CWLPY + +  D+ +  ++IQ+ CE  + + + +  TE L F H CLNPI+YAF+G
Sbjct: 251  FLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQ 310

Query: 1014 KF-----KTSAQHALTS 1049
             F     K  A H L S
Sbjct: 311  NFRHGFLKILAMHGLVS 327



>gi|14043042|ref|NP_112477.1| (NM_031200) chemokine (C-C motif)
            receptor 9 isoform A [Homo sapiens]
          Length = 369

 Score =  213 bits (542), Expect = 2e-55
 Identities = 112/312 (35%), Positives = 177/312 (55%), Gaps = 15/312 (4%)
 Frame = +3

Query: 132  DDLGSGDYDSIKEP---------CFREENAHFNRIFLPTVYSIIFLTGIVGNGLVILVMG 284
            DD GS    S+++          C +     F   FLP +Y ++F+ G +GN LVILV
Sbjct: 15   DDYGSESTSSMEDYVNFNFTDFYCEKNNVRQFASHFLPPLYWLVFIVGALGNSLVILVYW 74

Query: 285  YQKKLRSMTDKYRLHLSVADLLFVLTLPFWAVDAVANWYFGKFLCKAVHVIYTVNLYSSV 464
            Y  ++++MTD + L+L++ADLLF++TLPFWA+ A   W F  F+CK V+ +Y +N YS V
Sbjct: 75   YCTRVKTMTDMFLLNLAIADLLFLVTLPFWAIAAADQWKFQTFMCKVVNSMYKMNFYSCV 134

Query: 465  LILAFISLDRYLAIVHA--TNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVREGDG 638
            L++  IS+DRY+AI  A   ++ R ++LL  K+V   +W+ A  L IP+ +++ ++E  G
Sbjct: 135  LLIMCISVDRYIAIAQAMRAHTWREKRLLYSKMVCFTIWVLAAALCIPEILYSQIKEESG 194

Query: 639  RYICDRFYPND----LWLVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGYQKRKAL 806
              IC   YP+D    L   V   + +++G  LP +V+  CY III  L  +K   K KAL
Sbjct: 195  IAICTMVYPSDESTKLKSAVLTLK-VILGFFLPFVVMACCYTIIIHTLIQAKKSSKHKAL 253

Query: 807  KTTVILILAFFACWLPYYIGISIDSFILLEIIQQGCEFESTVHKWISITEALAFFHCCLN 986
            K T+ ++  F     PY   + + +     +    C   + +     +T+ +AFFH CLN
Sbjct: 254  KVTITVLTVFVLSQFPYNCILLVQTIDAYAMFISNCAVSTNIDICFQVTQTIAFFHSCLN 313

Query: 987  PILYAFLGAKFK 1022
            P+LY F+G +F+
Sbjct: 314  PVLYVFVGERFR 325



>gi|14043044|ref|NP_006632.2| (NM_006641) chemokine (C-C motif)
            receptor 9 isoform B [Homo sapiens]
          Length = 357

 Score =  213 bits (542), Expect = 2e-55
 Identities = 112/312 (35%), Positives = 177/312 (55%), Gaps = 15/312 (4%)
 Frame = +3

Query: 132  DDLGSGDYDSIKEP---------CFREENAHFNRIFLPTVYSIIFLTGIVGNGLVILVMG 284
            DD GS    S+++          C +     F   FLP +Y ++F+ G +GN LVILV
Sbjct: 3    DDYGSESTSSMEDYVNFNFTDFYCEKNNVRQFASHFLPPLYWLVFIVGALGNSLVILVYW 62

Query: 285  YQKKLRSMTDKYRLHLSVADLLFVLTLPFWAVDAVANWYFGKFLCKAVHVIYTVNLYSSV 464
            Y  ++++MTD + L+L++ADLLF++TLPFWA+ A   W F  F+CK V+ +Y +N YS V
Sbjct: 63   YCTRVKTMTDMFLLNLAIADLLFLVTLPFWAIAAADQWKFQTFMCKVVNSMYKMNFYSCV 122

Query: 465  LILAFISLDRYLAIVHA--TNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVREGDG 638
            L++  IS+DRY+AI  A   ++ R ++LL  K+V   +W+ A  L IP+ +++ ++E  G
Sbjct: 123  LLIMCISVDRYIAIAQAMRAHTWREKRLLYSKMVCFTIWVLAAALCIPEILYSQIKEESG 182

Query: 639  RYICDRFYPND----LWLVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGYQKRKAL 806
              IC   YP+D    L   V   + +++G  LP +V+  CY III  L  +K   K KAL
Sbjct: 183  IAICTMVYPSDESTKLKSAVLTLK-VILGFFLPFVVMACCYTIIIHTLIQAKKSSKHKAL 241

Query: 807  KTTVILILAFFACWLPYYIGISIDSFILLEIIQQGCEFESTVHKWISITEALAFFHCCLN 986
            K T+ ++  F     PY   + + +     +    C   + +     +T+ +AFFH CLN
Sbjct: 242  KVTITVLTVFVLSQFPYNCILLVQTIDAYAMFISNCAVSTNIDICFQVTQTIAFFHSCLN 301

Query: 987  PILYAFLGAKFK 1022
            P+LY F+G +F+
Sbjct: 302  PVLYVFVGERFR 313



>gi|4504683|ref|NP_001548.1| (NM_001557) interleukin 8 receptor beta;
            chemokine (CXC) receptor 2; high affinity interleukin-8
            receptor B; GRO/MGSA receptor; interleukin 8 receptor B;
            interleukin 8 receptor; CXCR2 gene for IL8 receptor type
            B; interleukin 8 receptor type 2 [Homo sapiens]
          Length = 360

 Score =  212 bits (539), Expect = 4e-55
 Identities = 113/311 (36%), Positives = 178/311 (56%), Gaps = 9/311 (2%)
 Frame = +3

Query: 117  DNYTEDDLGSGDYDSIKEPCFRE------ENAHFNRIFLPTVYSIIFLTGIVGNGLVILV 278
            D +  +DL +  Y S   P   +      E+   N+ F+  +Y+++FL  ++GN LV+LV
Sbjct: 13   DFWKGEDLSNYSYSSTLPPFLLDAAPCEPESLEINKYFVVIIYALVFLLSLLGNSLVMLV 72

Query: 279  MGYQKKLRSMTDKYRLHLSVADLLFVLTLPFWAVDAVANWYFGKFLCKAVHVIYTVNLYS 458
            + Y +  RS+TD Y L+L++ADLLF LTLP WA   V  W FG FLCK V ++  VN YS
Sbjct: 73   ILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLKEVNFYS 132

Query: 459  SVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIF-ANVREGD 635
             +L+LA IS+DRYLAIVHAT +   ++ L  K + + +W  +LLL +P  +F   V   +
Sbjct: 133  GILLLACISVDRYLAIVHATRTLTQKRYLV-KFICLSIWGLSLLLALPVLLFRRTVYSSN 191

Query: 636  GRYICDRFYPNDL--WLVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGYQKRKALK 809
                C     N+   W ++ +      G I+P +++L CY   +  L  +   QK +A++
Sbjct: 192  VSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFKAHMGQKHRAMR 251

Query: 810  TTVILILAFFACWLPYYIGISIDSFILLEIIQQGCEFESTVHKWISITEALAFFHCCLNP 989
                ++L F  CWLPY + +  D+ +  ++IQ+ CE  + + + +  TE L   H CLNP
Sbjct: 252  VIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATEILGILHSCLNP 311

Query: 990  ILYAFLGAKFK 1022
            ++YAF+G KF+
Sbjct: 312  LIYAFIGQKFR 322



>gi|14589869|ref|NP_116743.1| (NM_032966) Burkitt lymphoma receptor 1
            isoform 2; Burkitt lymphoma receptor 1, GTP-binding
            protein; C-X-C chemokine receptor type 5;
            monocyte-derived receptor 15; Burkitt lymphoma receptor
            1, GTP binding protein [Homo sapiens]
          Length = 327

 Score =  207 bits (526), Expect = 1e-53
 Identities = 104/295 (35%), Positives = 169/295 (57%), Gaps = 8/295 (2%)
 Frame = +3

Query: 192  AHFNRIFLPTVYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVLTLPF 371
            A F  +F+P  YS+IFL G++GN LV++++   ++ RS T+ +  HL+VADLL V  LPF
Sbjct: 2    ASFKAVFVPVAYSLIFLLGVIGNVLVLVILERHRQTRSSTETFLFHLAVADLLLVFILPF 61

Query: 372  WAVDAVANWYFGKFLCKAVHVIYTVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAE 551
               +    W  G FLCK V  ++ VN Y S L+LA I++DRYLAIVHA ++ R R+LL+
Sbjct: 62   AVAEGSVGWVLGTFLCKTVIALHKVNFYCSSLLLACIAVDRYLAIVHAVHAYRHRRLLSI 121

Query: 552  KVVYVGVWIPALLLTIPDFIFANVREGDGR-------YICDRFYPNDLWLVVFQFQHIMV 710
             +    +W+   LL +P+ +FA V +G          +  +       W    +F + +
Sbjct: 122  HITCGTIWLVGFLLALPEILFAKVSQGHHNNSLPRCTFSQENQAETHAWF-TSRFLYHVA 180

Query: 711  GLILPGIVILSCYCIIISKLSHS-KGYQKRKALKTTVILILAFFACWLPYYIGISIDSFI 887
            G +LP +V+  CY  ++ +L  + +  Q++KA++  +++   FF CW PY+I I +D+
Sbjct: 181  GFLLPMLVMGWCYVGVVHRLRQAQRRPQRQKAVRVAILVTSIFFLCWSPYHIVIFLDTLA 240

Query: 888  LLEIIQQGCEFESTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSV 1052
             L+ +   C+   ++   I++ E L   HCCLNP+LY F G KF++     LT +
Sbjct: 241  RLKAVDNTCKLNGSLPVAITMCEFLGLAHCCLNPMLYTFAGVKFRSDLSRLLTKL 295



>gi|4502415|ref|NP_001707.1| (NM_001716) Burkitt lymphoma receptor 1
            isoform 1; Burkitt lymphoma receptor 1, GTP-binding
            protein; C-X-C chemokine receptor type 5;
            monocyte-derived receptor 15; Burkitt lymphoma receptor
            1, GTP binding protein [Homo sapiens]
          Length = 372

 Score =  207 bits (526), Expect = 1e-53
 Identities = 104/295 (35%), Positives = 169/295 (57%), Gaps = 8/295 (2%)
 Frame = +3

Query: 192  AHFNRIFLPTVYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVLTLPF 371
            A F  +F+P  YS+IFL G++GN LV++++   ++ RS T+ +  HL+VADLL V  LPF
Sbjct: 47   ASFKAVFVPVAYSLIFLLGVIGNVLVLVILERHRQTRSSTETFLFHLAVADLLLVFILPF 106

Query: 372  WAVDAVANWYFGKFLCKAVHVIYTVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAE 551
               +    W  G FLCK V  ++ VN Y S L+LA I++DRYLAIVHA ++ R R+LL+
Sbjct: 107  AVAEGSVGWVLGTFLCKTVIALHKVNFYCSSLLLACIAVDRYLAIVHAVHAYRHRRLLSI 166

Query: 552  KVVYVGVWIPALLLTIPDFIFANVREGDGR-------YICDRFYPNDLWLVVFQFQHIMV 710
             +    +W+   LL +P+ +FA V +G          +  +       W    +F + +
Sbjct: 167  HITCGTIWLVGFLLALPEILFAKVSQGHHNNSLPRCTFSQENQAETHAWF-TSRFLYHVA 225

Query: 711  GLILPGIVILSCYCIIISKLSHS-KGYQKRKALKTTVILILAFFACWLPYYIGISIDSFI 887
            G +LP +V+  CY  ++ +L  + +  Q++KA++  +++   FF CW PY+I I +D+
Sbjct: 226  GFLLPMLVMGWCYVGVVHRLRQAQRRPQRQKAVRVAILVTSIFFLCWSPYHIVIFLDTLA 285

Query: 888  LLEIIQQGCEFESTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSV 1052
             L+ +   C+   ++   I++ E L   HCCLNP+LY F G KF++     LT +
Sbjct: 286  RLKAVDNTCKLNGSLPVAITMCEFLGLAHCCLNPMLYTFAGVKFRSDLSRLLTKL 340


  Database: RefSeq (Homo Sapiens/Amino Acid)
    Posted date:  Jul 1, 2003  6:07 AM
  Number of letters in database: 10,046,356
  Number of sequences in database:  19,244

Lambda     K      H
   0.318    0.135    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24001322
Number of Sequences: 19244
Number of extensions: 646274
Number of successful extensions: 2846
Number of sequences better than 10.0: 319
Number of HSP's better than 10.0 without gapping: 1628
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 387
Number of HSP's gapped (non-prelim): 1975
length of query: 360
length of database: 10,046,356
effective HSP length: 47
effective length of query: 312
effective length of database: 9,141,888
effective search space: 2852269056
effective search space used: 2852269056
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)

Search to RefSeq (Mouse) database

Query= 20030531C-003703 (20030531C-003703) 20030531C-003703
         (1080 letters)

Database: RefSeq (Mus Musculus/Amino Acid)
           15,330 sequences; 7,155,815 total letters

Searching..................................................done

                                                                               Score     E
            Sequences producing significant alignments:                        (bits)  Value

Alignment   gi|6753460|ref|NP_034041.1| (NM_009911) chemokine (C-X-C motif)...   595  e-170
Alignment   gi|6753458|ref|NP_034040.1| (NM_009910) chemokine (C-X-C motif)...   225  3e-59
Alignment   gi|6671772|ref|NP_031745.1| (NM_007719) chemokine (C-C motif) r...   220  1e-57
Alignment   gi|6857773|ref|NP_034046.1| (NM_009916) chemokine (C-C motif) r...   218  5e-57
Alignment   gi|6753318|ref|NP_033965.1| (NM_009835) chemokine (C-C motif) r...   213  1e-55
Alignment   gi|6753462|ref|NP_034043.1| (NM_009913) chemokine (C-C motif) r...   208  3e-54
Alignment   gi|6753456|ref|NP_034039.1| (NM_009909) interleukin 8 receptor ...   202  2e-52
Alignment   gi|31542483|ref|NP_067622.2| (NM_021609) D6 beta-chemokine rece...   202  3e-52
Alignment   gi|6680790|ref|NP_031577.1| (NM_007551) Burkitt lymphoma recept...   202  3e-52
Alignment   gi|6671774|ref|NP_031746.1| (NM_007720) chemokine (C-C motif) r...   200  9e-52


>gi|6753460|ref|NP_034041.1| (NM_009911) chemokine (C-X-C motif)
            receptor 4; chemokine (C-X-C) receptor 4;
            leukocyte-expressed seven-transmembrane-domain [Mus
            musculus]
          Length = 359

 Score =  595 bits (1534), Expect = e-170
 Identities = 292/330 (88%), Positives = 313/330 (94%), Gaps = 5/330 (1%)
 Frame = +3

Query: 105  IFTSDNYTEDDLGSGDYDSIKEPCFREENAHFNRIFLPTVYSIIFLTGIVGNGLVILVMG 284
            I+TSDNY+E+ +GSGDYDS KEPCFR+EN HFNRIFLPT+Y IIFLTGIVGNGLVILVMG
Sbjct: 8    IYTSDNYSEE-VGSGDYDSNKEPCFRDENVHFNRIFLPTIYFIIFLTGIVGNGLVILVMG 66

Query: 285  YQKKLRSMTDKYRLHLSVADLLFVLTLPFWAVDAVANWYFGKFLCKAVHVIYTVNLYSSV 464
            YQKKLRSMTDKYRLHLSVADLLFV+TLPFWAVDA+A+WYFGKFLCKAVH+IYTVNLYSSV
Sbjct: 67   YQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAMADWYFGKFLCKAVHIIYTVNLYSSV 126

Query: 465  LILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANV-----RE 629
            LILAFISLDRYLAIVHATNSQRPRKLLAEK VYVGVWIPALLLTIPDFIFA+V      +
Sbjct: 127  LILAFISLDRYLAIVHATNSQRPRKLLAEKAVYVGVWIPALLLTIPDFIFADVSQGDISQ 186

Query: 630  GDGRYICDRFYPNDLWLVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGYQKRKALK 809
            GD RYICDR YP+ LW+VVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKG+QKRKALK
Sbjct: 187  GDDRYICDRLYPDSLWMVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGHQKRKALK 246

Query: 810  TTVILILAFFACWLPYYIGISIDSFILLEIIQQGCEFESTVHKWISITEALAFFHCCLNP 989
            TTVILILAFFACWLPYY+GISIDSFILL +I+QGC+FES VHKWISITEALAFFHCCLNP
Sbjct: 247  TTVILILAFFACWLPYYVGISIDSFILLGVIKQGCDFESIVHKWISITEALAFFHCCLNP 306

Query: 990  ILYAFLGAKFKTSAQHALTSVSRGSSLKIL 1079
            ILYAFLGAKFK+SAQHAL S+SRGSSLKIL
Sbjct: 307  ILYAFLGAKFKSSAQHALNSMSRGSSLKIL 336



>gi|6753458|ref|NP_034040.1| (NM_009910) chemokine (C-X-C motif)
            receptor 3; chemokine (C-X-C) receptor 3 [Mus musculus]
          Length = 367

 Score =  225 bits (574), Expect = 3e-59
 Identities = 119/321 (37%), Positives = 183/321 (56%), Gaps = 4/321 (1%)
 Frame = +3

Query: 108  FTSDNYTED-DLGSGDYD-SIKEPCFREENAHFNRIFLPTVYSIIFLTGIVGNGLVILVM 281
            F  +N T   D G  + D S   PC ++ + +F+R FLP +YS++FL G++GNG V  V+
Sbjct: 18   FLLENSTSPYDYGENESDFSDSPPCPQDFSLNFDRTFLPALYSLLFLLGLLGNGAVAAVL 77

Query: 282  GYQKKLRSMTDKYRLHLSVADLLFVLTLPFWAVDAVANWYFGKFLCKAVHVIYTVNLYSS 461
              Q+   S TD + LHL+VAD+L VLTLP WAVDA   W FG  LCK    ++ +N Y+
Sbjct: 78   LSQRTALSSTDTFLLHLAVADVLLVLTLPLWAVDAAVQWVFGPGLCKVAGALFNINFYAG 137

Query: 462  VLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIF--ANVREGD 635
              +LA IS DRYL+IVHAT   R    +   +  + VW   LL  +PDFI+  AN  +
Sbjct: 138  AFLLACISFDRYLSIVHATQIYRRDPRVRVALTCIVVWGLCLLFALPDFIYLSANYDQRL 197

Query: 636  GRYICDRFYPNDLWLVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGYQKRKALKTT 815
                C   +P  +     +   ++ G +LP +V+  CY  I++ L  S+G ++ +A++
Sbjct: 198  NATHCQYNFP-QVGRTALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRFRAMRLV 256

Query: 816  VILILAFFACWLPYYIGISIDSFILLEIIQQGCEFESTVHKWISITEALAFFHCCLNPIL 995
            V+++ AF  CW PY++ + +D  + + ++ + C  ES V    S+T  + + HCCLNP+L
Sbjct: 257  VVVVAAFAVCWTPYHLVVLVDILMDVGVLARNCGRESHVDVAKSVTSGMGYMHCCLNPLL 316

Query: 996  YAFLGAKFKTSAQHALTSVSR 1058
            YAF+G KF+       T + R
Sbjct: 317  YAFVGVKFREQMWMLFTRLGR 337



>gi|6671772|ref|NP_031745.1| (NM_007719) chemokine (C-C motif)
            receptor 7; chemokine (C-C) receptor 7 [Mus musculus]
          Length = 378

 Score =  220 bits (560), Expect = 1e-57
 Identities = 113/313 (36%), Positives = 181/313 (57%), Gaps = 7/313 (2%)
 Frame = +3

Query: 108  FTSDNYTEDDLGSG---DYDSIKEPCFREENAHFNRIFLPTVYSIIFLTGIVGNGLVILV 278
            F  D  T+D +G     DY   +  CF+++  +F   FLP +YS+I   G++GNGLVIL
Sbjct: 23   FCQDEVTDDYIGENTTVDYTLYESVCFKKDVRNFKAWFLPLMYSVICFVGLLGNGLVILT 82

Query: 279  MGYQKKLRSMTDKYRLHLSVADLLFVLTLPFWAVDAVANWYFGKFLCKAVHVIYTVNLYS 458
              Y K+L++MTD Y L+L+VAD+LF+L LPFWA     +W FG +LCK +  IY ++ +S
Sbjct: 83   YIYFKRLKTMTDTYLLNLAVADILFLLILPFWAYSEAKSWIFGVYLCKGIFGIYKLSFFS 142

Query: 459  SVLILAFISLDRYLAIVHAT--NSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVRE- 629
             +L+L  IS+DRY+AIV A   +  R R LL  K+  VG+W+ AL L+IP+ +++ +++
Sbjct: 143  GMLLLLCISIDRYVAIVQAVSRHRHRARVLLISKLSCVGIWMLALFLSIPELLYSGLQKN 202

Query: 630  -GDGRYICDRFYPNDLWLVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGYQKRKAL 806
             G+    C         L+  Q   ++ G ++P + +  CY III  L  ++ +++ KA+
Sbjct: 203  SGEDTLRCSLVSAQVEALITIQVAQMVFGFLVPMLAMSFCYLIIIRTLLQARNFERNKAI 262

Query: 807  KTTVILILAFFACWLPYYIGISIDSFILLEIIQQGCEFESTVHKWISITEALAFFHCCLN 986
            K  + +++ F    LPY   +   +     I    CE    ++    +T +LA   CC+N
Sbjct: 263  KVIIAVVVVFIVFQLPYNGVVLAQTVANFNITNSSCETSKQLNIAYDVTYSLASVRCCVN 322

Query: 987  PILYAFLGAKFKT 1025
            P LYAF+G KF++
Sbjct: 323  PFLYAFIGVKFRS 335



>gi|6857773|ref|NP_034046.1| (NM_009916) chemokine (C-C motif)
            receptor 4; chemokine (C-C) receptor 4; CC CKR-4;
            leukocyte-expressed seven-transmembrane-domain receptor
            [Mus musculus]
          Length = 360

 Score =  218 bits (554), Expect = 5e-57
 Identities = 109/292 (37%), Positives = 170/292 (57%), Gaps = 2/292 (0%)
 Frame = +3

Query: 153  YDSIKEPCFREENAHFNRIFLPTVYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHL 332
            Y+S+ +PC +E    F  +FLP +YS++FL G+ GN +V+LV+   K+L+SMTD Y L+L
Sbjct: 22   YESMPKPCTKEGIKAFGEVFLPPLYSLVFLLGLFGNSVVVLVLFKYKRLKSMTDVYLLNL 81

Query: 333  SVADLLFVLTLPFWAVDAVANWYFGKFLCKAVHVIYTVNLYSSVLILAFISLDRYLAIVH 512
            +++DLLFVL+LPFW   A   W FG  LCK V  +Y V  YS +  +  +S+DRYLAIVH
Sbjct: 82   AISDLLFVLSLPFWGYYAADQWVFGLGLCKIVSWMYLVGFYSGIFFIMLMSIDRYLAIVH 141

Query: 513  ATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVREGDGRYICDRFYP--NDLWLVV 686
            A  S + R L    +  +  W  A+  ++P  +F+          C   Y   +  W V+
Sbjct: 142  AVFSLKARTLTYGVITSLITWSVAVFASLPGLLFSTCYTEHNHTYCKTQYSVNSTTWKVL 201

Query: 687  FQFQHIMVGLILPGIVILSCYCIIISKLSHSKGYQKRKALKTTVILILAFFACWLPYYIG 866
               +  ++GL++P  ++L  Y +II  L H K  +K +A++    +++ F   W PY +
Sbjct: 202  SSLEINVLGLLIPLGIMLFWYSMIIRTLQHCKNEKKNRAVRMIFGVVVLFLGFWTPYNVV 261

Query: 867  ISIDSFILLEIIQQGCEFESTVHKWISITEALAFFHCCLNPILYAFLGAKFK 1022
            + +++ + LE++Q  C  E  +   I  TE L F HCCLNP++Y FLG KF+
Sbjct: 262  LFLETLVELEVLQD-CTLERYLDYAIQATETLGFIHCCLNPVIYFFLGEKFR 312



>gi|6753318|ref|NP_033965.1| (NM_009835) chemokine (C-C motif)
            receptor 6 [Mus musculus]
          Length = 367

 Score =  213 bits (542), Expect = 1e-55
 Identities = 114/316 (36%), Positives = 179/316 (56%), Gaps = 15/316 (4%)
 Frame = +3

Query: 120  NYTEDDLGSGDYDSIKE--------PCFREENAHFNRIFLPTVYSIIFLTGIVGNGLVIL 275
            N TE   G+ DYD+ +         PC  EE  +F ++F+P  YS+I + G++GN +V++
Sbjct: 2    NSTESYFGTDDYDNTEYYSIPPDHGPCSLEEVRNFTKVFVPIAYSLICVFGLLGNIMVVM 61

Query: 276  VMGYQKKLRSMTDKYRLHLSVADLLFVLTLPFWAVDAVAN-WYFGKFLCKAVHVIYTVNL 452
               + KK RSMTD Y L++++ D+LFVLTLPFWAV    N W F   LCK +   Y VN
Sbjct: 62   TFAFYKKARSMTDVYLLNMAITDILFVLTLPFWAVTHATNTWVFSDALCKLMKGTYAVNF 121

Query: 453  YSSVLILAFISLDRYLAIVHATNS--QRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVR 626
               +L+LA IS+DRY+AIV AT S   R R L   KV+ V VW  +++++ P FIF
Sbjct: 122  NCGMLLLACISMDRYIAIVQATKSFRVRSRTLTHSKVICVAVWFISIIISSPTFIFNKKY 181

Query: 627  EGDGRYICDRFYPN----DLWLVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGYQK 794
            E   R +C+  Y +      W ++     +  G   P + ++ CY  II  L  ++  ++
Sbjct: 182  ELQDRDVCEPRYRSVSEPITWKLLGMGLELFFGFFTPLLFMVFCYLFIIKTLVQAQNSKR 241

Query: 795  RKALKTTVILILAFFACWLPYYIGISIDSFILLEIIQQGCEFESTVHKWISITEALAFFH 974
             +A++  + ++L F AC +P+ + + + + +    + + C  E  +    ++ E LAF H
Sbjct: 242  HRAIRVVIAVVLVFLACQIPHNMVLLVTA-VNTGKVGRSCSTEKVLAYTRNVAEVLAFLH 300

Query: 975  CCLNPILYAFLGAKFK 1022
            CCLNP+LYAF+G KF+
Sbjct: 301  CCLNPVLYAFIGQKFR 316



>gi|6753462|ref|NP_034043.1| (NM_009913) chemokine (C-C motif)
            receptor 9; chemokine (C-C) receptor 10 [Mus musculus]
          Length = 369

 Score =  208 bits (530), Expect = 3e-54
 Identities = 107/289 (37%), Positives = 165/289 (57%), Gaps = 6/289 (2%)
 Frame = +3

Query: 174  CFREENAHFNRIFLPTVYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLF 353
            C +     F   FLP +Y ++F+ G +GN LVILV  Y  ++++MTD + L+L++ADLLF
Sbjct: 38   CKKNNVRQFASHFLPPLYWLVFIVGTLGNSLVILVYWYCTRVKTMTDMFLLNLAIADLLF 97

Query: 354  VLTLPFWAVDAVANWYFGKFLCKAVHVIYTVNLYSSVLILAFISLDRYLAIVHATNSQ-- 527
            + TLPFWA+ A   W F  F+CK V+ +Y +N YS VL++  IS+DRY+AIV A  +Q
Sbjct: 98   LATLPFWAIAAAGQWMFQTFMCKVVNSMYKMNFYSCVLLIMCISVDRYIAIVQAMKAQVW 157

Query: 528  RPRKLLAEKVVYVGVWIPALLLTIPDFIFANVREGDGRYICDRFYPND----LWLVVFQF 695
            R ++LL  K+V + +W+ A +L  P+ +++ V    G   C   YP D    L   V
Sbjct: 158  RQKRLLYSKMVCITIWVMAAVLCTPEILYSQVSGESGIATCTMVYPKDKNAKLKSAVLIL 217

Query: 696  QHIMVGLILPGIVILSCYCIIISKLSHSKGYQKRKALKTTVILILAFFACWLPYYIGISI 875
            + + +G  LP +V+  CY III  L  +K   K KALK T+ ++  F     PY   + +
Sbjct: 218  K-VTLGFFLPFMVMAFCYTIIIHTLVQAKKSSKHKALKVTITVLTVFIMSQFPYNSILVV 276

Query: 876  DSFILLEIIQQGCEFESTVHKWISITEALAFFHCCLNPILYAFLGAKFK 1022
             +     +    C   + +     +T+ +AFFH CLNP+LY F+G +F+
Sbjct: 277  QAVDAYAMFISNCTISTNIDICFQVTQTIAFFHSCLNPVLYVFVGERFR 325



>gi|6753456|ref|NP_034039.1| (NM_009909) interleukin 8 receptor beta;
            chemokine (C-X-C) receptor 2; IL-8 receptor alpha chain;
            interleukin-8 receptor type B [Mus musculus]
          Length = 359

 Score =  202 bits (515), Expect = 2e-52
 Identities = 115/320 (35%), Positives = 173/320 (53%), Gaps = 15/320 (4%)
 Frame = +3

Query: 108  FTSDNYTEDDLGSGDYDSIKE------------PCFREENAHFNRIFLPTVYSIIFLTGI 251
            F  D +  +D  SGD D                PC   EN   N   +  +Y ++ L  +
Sbjct: 4    FKVDKFNIEDFFSGDLDIFNYSSGMPSILPDAVPC-HSENLEINSYAVVVIYVLVTLLSL 62

Query: 252  VGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVLTLPFWAVDAVANWYFGKFLCKAVH 431
            VGN LV+LV+ Y +   S+TD Y L+L++ADL F LTLP WA   V  W FG  LCK
Sbjct: 63   VGNSLVMLVILYNRSTCSVTDVYLLNLAIADLFFALTLPVWAASKVNGWTFGSTLCKIFS 122

Query: 432  VIYTVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFI 611
             +  V  YSSVL+LA IS+DRYLAIVHAT++   ++ L  K V + +W+ +++L +P  I
Sbjct: 123  YVKEVTFYSSVLLLACISMDRYLAIVHATSTLIQKRHLV-KFVCIAMWLLSVILALPILI 181

Query: 612  FAN-VREGDGRYICDRFYPNDL--WLVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSK 782
              N V+      +C     N+     VV +      G ++P +++L CY   +  L  +
Sbjct: 182  LRNPVKVNLSTLVCYEDVGNNTSRLRVVLRILPQTFGFLVPLLIMLFCYGFTLRTLFKAH 241

Query: 783  GYQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIQQGCEFESTVHKWISITEAL 962
              QK +A++    ++L F  CWLPY + +  D+ +  ++I++ CE    + K ++ TE L
Sbjct: 242  MGQKHRAMRVIFAVVLVFLLCWLPYNLVLFTDTLMRTKLIKETCERRDDIDKALNATEIL 301

Query: 963  AFFHCCLNPILYAFLGAKFK 1022
             F H CLNPI+YAF+G KF+
Sbjct: 302  GFLHSCLNPIIYAFIGQKFR 321



>gi|31542483|ref|NP_067622.2| (NM_021609) D6 beta-chemokine receptor
            [Mus musculus]
          Length = 378

 Score =  202 bits (513), Expect = 3e-52
 Identities = 100/298 (33%), Positives = 170/298 (56%), Gaps = 7/298 (2%)
 Frame = +3

Query: 150  DYDSIKEP----CFREENAHFNRIFLPTVYSIIFLTGIVGNGLVILVMGYQKKLRSMTDK 317
            DYD + +     C ++E   F R+FLP VYS+IF+ G+ GN L+++V+ +    R   +
Sbjct: 23   DYDYLDDMTILVCRKDEVLSFGRVFLPVVYSLIFVLGLAGNLLLLVVLLHSAPRRRTMEL 82

Query: 318  YRLHLSVADLLFVLTLPFWAVDAVANWYFGKFLCKAVHVIYTVNLYSSVLILAFISLDRY 497
            Y L+L+V++LLFV+T+PFWA+    +W FG FLCK +  +Y++N Y  +  +  +SLD+Y
Sbjct: 83   YLLNLAVSNLLFVVTMPFWAISVAWHWVFGSFLCKVISTLYSINFYCGIFFITCMSLDKY 142

Query: 498  LAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVREG-DGRYICDRFYPN-- 668
            L IVHA    RP+      ++ V VWI +L +++P+ +F  + +  DG + C   +
Sbjct: 143  LEIVHAQPLHRPKAQFRNLLLIVMVWITSLAISVPEMVFVQIHQTLDGVWHCYADFGGHA 202

Query: 669  DLWLVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGYQKRKALKTTVILILAFFACW 848
             +W +  +FQ  ++G +LP + ++  Y  I   L   +   + +AL+    L++ FF  W
Sbjct: 203  TIWKLYLRFQLNLLGFLLPLLAMIFFYSRIGCVLVRLRPPGQGRALRMAAALVIVFFMLW 262

Query: 849  LPYYIGISIDSFILLEIIQQGCEFESTVHKWISITEALAFFHCCLNPILYAFLGAKFK 1022
             PY + + + S + L +    CE    +   + +TE+LAF HCC  P+LYAF   +F+
Sbjct: 263  FPYNLTLFLHSLLDLHVF-GNCEISHRLDYTLQVTESLAFSHCCFTPVLYAFCSHRFR 319



>gi|6680790|ref|NP_031577.1| (NM_007551) Burkitt lymphoma receptor 1
            [Mus musculus]
          Length = 374

 Score =  202 bits (513), Expect = 3e-52
 Identities = 103/293 (35%), Positives = 165/293 (56%), Gaps = 8/293 (2%)
 Frame = +3

Query: 198  FNRIFLPTVYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVLTLPFWA 377
            F  +F+P  YS+IFL G++GN LV++++   +  RS T+ +  HL+VADLL V  LPF
Sbjct: 51   FKAVFMPVAYSLIFLLGMMGNILVLVILERHRHTRSSTETFLFHLAVADLLLVFILPFAV 110

Query: 378  VDAVANWYFGKFLCKAVHVIYTVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKV 557
             +    W  G FLCK V  ++ +N Y S L++A I++DRYLAIVHA ++ R R+LL+  +
Sbjct: 111  AEGSVGWVLGTFLCKTVIALHKINFYCSSLLVACIAVDRYLAIVHAVHAYRRRRLLSIHI 170

Query: 558  VYVGVWIPALLLTIPDFIFANV---REGDGRYICDRFYPND----LWLVVFQFQHIMVGL 716
                +W+   L  +P+ +FA V      D    C     N+     W    +F + + G
Sbjct: 171  TCTAIWLAGFLFALPELLFAKVGQPHNNDSLPQCTFSQENEAETRAWF-TSRFLYHIGGF 229

Query: 717  ILPGIVILSCYCIIISKLSHS-KGYQKRKALKTTVILILAFFACWLPYYIGISIDSFILL 893
            +LP +V+  CY  ++ +L  + +  Q++KA++  +++   FF CW PY+I I +D+   L
Sbjct: 230  LLPMLVMGWCYVGVVHRLLQAQRRPQRQKAVRVAILVTSIFFLCWSPYHIVIFLDTLERL 289

Query: 894  EIIQQGCEFESTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSV 1052
            + +   CE    +   I++ E L   HCCLNP+LY F G KF++     LT +
Sbjct: 290  KAVNSSCELSGYLSVAITLCEFLGLAHCCLNPMLYTFAGVKFRSDLSRLLTKL 342



>gi|6671774|ref|NP_031746.1| (NM_007720) chemokine (C-C motif)
            receptor 8; chemokine (C-C) receptor 8 [Mus musculus]
          Length = 353

 Score =  200 bits (509), Expect = 9e-52
 Identities = 107/306 (34%), Positives = 174/306 (55%), Gaps = 5/306 (1%)
 Frame = +3

Query: 120  NYT-EDDLGSGDY--DSIKEPCFREENAHFNRIFLPTVYSIIFLTGIVGNGLVILVMGYQ 290
            +YT E ++   DY  D    PC  E     + ++L  +Y ++F+ G++GN LVILV+
Sbjct: 2    DYTMEPNVTMTDYYPDFFTAPCDAEFLLRGSMLYLAILYCVLFVLGLLGNSLVILVLVGC 61

Query: 291  KKLRSMTDKYRLHLSVADLLFVLTLPFWAVDAVANWYFGKFLCKAVHVIYTVNLYSSVLI 470
            KKLRS+TD Y L+L+ +DLLFVL++PF   + +  W FG  +CK V  +Y +  +SS+
Sbjct: 62   KKLRSITDIYLLNLAASDLLFVLSIPFQTHNLLDQWVFGTAMCKVVSGLYYIGFFSSMFF 121

Query: 471  LAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVREGDGRYIC 650
            +  +S+DRYLAIVHA  + + R       + + VW+ A+  TIP  +F  V   DG   C
Sbjct: 122  ITLMSVDRYLAIVHAVYAIKVRTASVGTALSLTVWLAAVTATIPLMVFYQVASEDGMLQC 181

Query: 651  DRFYPND--LWLVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGYQKRKALKTTVIL 824
             +FY      W +   F+   +GL+LP  ++L CY  I+ +L     + + +A+K  + +
Sbjct: 182  FQFYEEQSLRWKLFTHFEINALGLLLPFAILLFCYVRILQQLRGCLNHNRTRAIKLVLTV 241

Query: 825  ILAFFACWLPYYIGISIDSFILLEIIQQGCEFESTVHKWISITEALAFFHCCLNPILYAF 1004
            ++     W+P+ + + + S   L I+  GC     +   I +TE ++F HCC+NP++YAF
Sbjct: 242  VIVSLLFWVPFNVALFLTSLHDLHIL-DGCATRQRLALAIHVTEVISFTHCCVNPVIYAF 300

Query: 1005 LGAKFK 1022
            +G KFK
Sbjct: 301  IGEKFK 306


  Database: RefSeq (Mus Musculus/Amino Acid)
    Posted date:  Jul 1, 2003  6:07 AM
  Number of letters in database: 7,155,815
  Number of sequences in database:  15,330

Lambda     K      H
   0.318    0.135    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17054580
Number of Sequences: 15330
Number of extensions: 452395
Number of successful extensions: 2238
Number of sequences better than 10.0: 391
Number of HSP's better than 10.0 without gapping: 1623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1816
length of query: 360
length of database: 7,155,815
effective HSP length: 47
effective length of query: 312
effective length of database: 6,435,305
effective search space: 2007815160
effective search space used: 2007815160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)