BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-003921
(625 letters)
Database: RefSeqSP
1040 sequences; 434,620 total letters
Searching...done
***** No hits found ******
Database: RefSeqSP
Posted date: Aug 1, 2006 7:14 PM
Number of letters in database: 434,620
Number of sequences in database: 1040
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 607,075
Number of Sequences: 1040
Number of extensions: 14503
Number of successful extensions: 25
Number of sequences better than 1.0e-05: 0
Number of HSP's better than 0.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 434,620
effective HSP length: 73
effective length of database: 358,700
effective search space used: 48065800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqBP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-003921
(625 letters)
Database: RefSeqBP
33,508 sequences; 16,112,626 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_851355.2| isocitrate dehydrogenase 1 (NADP+), soluble [Bo... 196 9e-51
Alignment gi|NP_786984.1| isocitrate dehydrogenase 2 (NADP+), mitochondri... 137 8e-33
>ref|NP_851355.2| isocitrate dehydrogenase 1 (NADP+), soluble [Bos taurus]
Length = 414
Score = 196 bits (499), Expect = 9e-51
Identities = 102/138 (73%), Positives = 110/138 (79%)
Frame = +3
Query: 198 MSQKIQGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLXIENRDATNDQVTKDA 377
MSQKIQGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDL IENRDATNDQVTKDA
Sbjct: 1 MSQKIQGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDA 60
Query: 378 AEAI*KYNVGVKCATFTPDYNKVEEFXLKQMWK*PYVTILNILGGACMKKTIFSQNKPQL 557
AEAI KYNVGVKCAT TPD +VEEF LKQMWK P TI NILGG ++ I +N P+L
Sbjct: 61 AEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRL 120
Query: 558 VISMGKAFFHCGNAFFEQ 611
V K +A+ +Q
Sbjct: 121 VSGWVKPIIIGRHAYGDQ 138
>ref|NP_786984.1| isocitrate dehydrogenase 2 (NADP+), mitochondrial [Bos taurus]
Length = 452
Score = 137 bits (344), Expect = 8e-33
Identities = 69/112 (61%), Positives = 83/112 (74%)
Frame = +3
Query: 225 VVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLXIENRDATNDQVTKDAAEAI*KYNV 404
VVEM GDEMTRIIW+ IKEKLI P+V++ L +DL + NRD TNDQVT D+A A KY+V
Sbjct: 50 VVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSV 109
Query: 405 GVKCATFTPDYNKVEEFXLKQMWK*PYVTILNILGGACMKKTIFSQNKPQLV 560
VKCAT TPD +VEEF LK+MWK P TI NILGG ++ I +N P+LV
Sbjct: 110 AVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLV 161
Database: RefSeqBP
Posted date: Aug 1, 2006 7:14 PM
Number of letters in database: 16,112,626
Number of sequences in database: 33,508
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,172,096
Number of Sequences: 33508
Number of extensions: 538427
Number of successful extensions: 1513
Number of sequences better than 1.0e-05: 2
Number of HSP's better than 0.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1513
length of database: 16,112,626
effective HSP length: 97
effective length of database: 12,862,350
effective search space used: 1414858500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqCP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-003921
(625 letters)
Database: RefSeqCP
33,732 sequences; 19,266,565 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_536047.2| PREDICTED: similar to Isocitrate dehydrogenase ... 195 3e-50
Alignment gi|XP_850187.1| PREDICTED: similar to Isocitrate dehydrogenase ... 195 3e-50
Alignment gi|XP_860853.1| PREDICTED: similar to Isocitrate dehydrogenase ... 195 3e-50
Alignment gi|XP_860821.1| PREDICTED: similar to Isocitrate dehydrogenase ... 195 3e-50
Alignment gi|XP_860792.1| PREDICTED: similar to Isocitrate dehydrogenase ... 195 3e-50
Alignment gi|XP_536192.2| PREDICTED: similar to isocitrate dehydrogenase ... 137 1e-32
>ref|XP_536047.2| PREDICTED: similar to Isocitrate dehydrogenase [NADP] cytoplasmic
(Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
ICDH) (IDP) isoform 1 [Canis familiaris]
Length = 414
Score = 195 bits (495), Expect = 3e-50
Identities = 101/138 (73%), Positives = 110/138 (79%)
Frame = +3
Query: 198 MSQKIQGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLXIENRDATNDQVTKDA 377
MSQKI+GGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDL IENRDATNDQVTKDA
Sbjct: 1 MSQKIRGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDA 60
Query: 378 AEAI*KYNVGVKCATFTPDYNKVEEFXLKQMWK*PYVTILNILGGACMKKTIFSQNKPQL 557
AEAI KYNVGVKCAT TPD +VEEF LKQMWK P TI NILGG ++ I +N P+L
Sbjct: 61 AEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRL 120
Query: 558 VISMGKAFFHCGNAFFEQ 611
V K +A+ +Q
Sbjct: 121 VSGWVKPIIIGRHAYGDQ 138
>ref|XP_850187.1| PREDICTED: similar to Isocitrate dehydrogenase [NADP] cytoplasmic
(Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
ICDH) (IDP) isoform 2 [Canis familiaris]
Length = 414
Score = 195 bits (495), Expect = 3e-50
Identities = 101/138 (73%), Positives = 110/138 (79%)
Frame = +3
Query: 198 MSQKIQGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLXIENRDATNDQVTKDA 377
MSQKI+GGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDL IENRDATNDQVTKDA
Sbjct: 1 MSQKIRGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDA 60
Query: 378 AEAI*KYNVGVKCATFTPDYNKVEEFXLKQMWK*PYVTILNILGGACMKKTIFSQNKPQL 557
AEAI KYNVGVKCAT TPD +VEEF LKQMWK P TI NILGG ++ I +N P+L
Sbjct: 61 AEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRL 120
Query: 558 VISMGKAFFHCGNAFFEQ 611
V K +A+ +Q
Sbjct: 121 VSGWVKPIIIGRHAYGDQ 138
>ref|XP_860853.1| PREDICTED: similar to Isocitrate dehydrogenase [NADP] cytoplasmic
(Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
ICDH) (IDP) isoform 5 [Canis familiaris]
Length = 408
Score = 195 bits (495), Expect = 3e-50
Identities = 101/138 (73%), Positives = 110/138 (79%)
Frame = +3
Query: 198 MSQKIQGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLXIENRDATNDQVTKDA 377
MSQKI+GGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDL IENRDATNDQVTKDA
Sbjct: 1 MSQKIRGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDA 60
Query: 378 AEAI*KYNVGVKCATFTPDYNKVEEFXLKQMWK*PYVTILNILGGACMKKTIFSQNKPQL 557
AEAI KYNVGVKCAT TPD +VEEF LKQMWK P TI NILGG ++ I +N P+L
Sbjct: 61 AEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRL 120
Query: 558 VISMGKAFFHCGNAFFEQ 611
V K +A+ +Q
Sbjct: 121 VSGWVKPIIIGRHAYGDQ 138
>ref|XP_860821.1| PREDICTED: similar to Isocitrate dehydrogenase [NADP] cytoplasmic
(Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
ICDH) (IDP) isoform 4 [Canis familiaris]
Length = 415
Score = 195 bits (495), Expect = 3e-50
Identities = 101/138 (73%), Positives = 110/138 (79%)
Frame = +3
Query: 198 MSQKIQGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLXIENRDATNDQVTKDA 377
MSQKI+GGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDL IENRDATNDQVTKDA
Sbjct: 1 MSQKIRGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDA 60
Query: 378 AEAI*KYNVGVKCATFTPDYNKVEEFXLKQMWK*PYVTILNILGGACMKKTIFSQNKPQL 557
AEAI KYNVGVKCAT TPD +VEEF LKQMWK P TI NILGG ++ I +N P+L
Sbjct: 61 AEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRL 120
Query: 558 VISMGKAFFHCGNAFFEQ 611
V K +A+ +Q
Sbjct: 121 VSGWVKPIIIGRHAYGDQ 138
>ref|XP_860792.1| PREDICTED: similar to Isocitrate dehydrogenase [NADP] cytoplasmic
(Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
ICDH) (IDP) isoform 3 [Canis familiaris]
Length = 299
Score = 195 bits (495), Expect = 3e-50
Identities = 101/138 (73%), Positives = 110/138 (79%)
Frame = +3
Query: 198 MSQKIQGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLXIENRDATNDQVTKDA 377
MSQKI+GGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDL IENRDATNDQVTKDA
Sbjct: 1 MSQKIRGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDA 60
Query: 378 AEAI*KYNVGVKCATFTPDYNKVEEFXLKQMWK*PYVTILNILGGACMKKTIFSQNKPQL 557
AEAI KYNVGVKCAT TPD +VEEF LKQMWK P TI NILGG ++ I +N P+L
Sbjct: 61 AEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRL 120
Query: 558 VISMGKAFFHCGNAFFEQ 611
V K +A+ +Q
Sbjct: 121 VSGWVKPIIIGRHAYGDQ 138
>ref|XP_536192.2| PREDICTED: similar to isocitrate dehydrogenase 2 (NADP+),
mitochondrial [Canis familiaris]
Length = 517
Score = 137 bits (344), Expect = 1e-32
Identities = 69/112 (61%), Positives = 83/112 (74%)
Frame = +3
Query: 225 VVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLXIENRDATNDQVTKDAAEAI*KYNV 404
VVEM GDEMTRIIW+ IKEKLI P+V++ L +DL + NRD TNDQVT D+A A KY+V
Sbjct: 116 VVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSV 175
Query: 405 GVKCATFTPDYNKVEEFXLKQMWK*PYVTILNILGGACMKKTIFSQNKPQLV 560
VKCAT TPD +VEEF LK+MWK P TI NILGG ++ I +N P+LV
Sbjct: 176 AVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLV 227
Database: RefSeqCP
Posted date: Aug 1, 2006 9:25 PM
Number of letters in database: 19,266,565
Number of sequences in database: 33,732
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,014,171
Number of Sequences: 33732
Number of extensions: 631340
Number of successful extensions: 1917
Number of sequences better than 1.0e-05: 6
Number of HSP's better than 0.0 without gapping: 1777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1917
length of database: 19,266,565
effective HSP length: 98
effective length of database: 15,960,829
effective search space used: 1739730361
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqHP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-003921
(625 letters)
Database: RefSeqHP
39,411 sequences; 17,774,539 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_005887.2| isocitrate dehydrogenase 1 (NADP+), soluble [Ho... 191 4e-49
Alignment gi|NP_002159.2| isocitrate dehydrogenase 2 (NADP+), mitochondri... 135 3e-32
>ref|NP_005887.2| isocitrate dehydrogenase 1 (NADP+), soluble [Homo sapiens]
Length = 414
Score = 191 bits (485), Expect = 4e-49
Identities = 99/138 (71%), Positives = 109/138 (78%)
Frame = +3
Query: 198 MSQKIQGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLXIENRDATNDQVTKDA 377
MS+KI GGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDL IENRDATNDQVTKDA
Sbjct: 1 MSKKISGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDA 60
Query: 378 AEAI*KYNVGVKCATFTPDYNKVEEFXLKQMWK*PYVTILNILGGACMKKTIFSQNKPQL 557
AEAI K+NVGVKCAT TPD +VEEF LKQMWK P TI NILGG ++ I +N P+L
Sbjct: 61 AEAIKKHNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRL 120
Query: 558 VISMGKAFFHCGNAFFEQ 611
V K +A+ +Q
Sbjct: 121 VSGWVKPIIIGRHAYGDQ 138
>ref|NP_002159.2| isocitrate dehydrogenase 2 (NADP+), mitochondrial precursor [Homo
sapiens]
Length = 452
Score = 135 bits (340), Expect = 3e-32
Identities = 68/112 (60%), Positives = 83/112 (74%)
Frame = +3
Query: 225 VVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLXIENRDATNDQVTKDAAEAI*KYNV 404
VVEM GDEMTRIIW+ IKEKLI P+V++ L +DL + NRD T+DQVT D+A A KY+V
Sbjct: 50 VVEMDGDEMTRIIWQFIKEKLILPHVDIQLKYFDLGLPNRDQTDDQVTIDSALATQKYSV 109
Query: 405 GVKCATFTPDYNKVEEFXLKQMWK*PYVTILNILGGACMKKTIFSQNKPQLV 560
VKCAT TPD +VEEF LK+MWK P TI NILGG ++ I +N P+LV
Sbjct: 110 AVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLV 161
Database: RefSeqHP
Posted date: Aug 2, 2006 12:57 AM
Number of letters in database: 17,774,539
Number of sequences in database: 39,411
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,982,299
Number of Sequences: 39411
Number of extensions: 620199
Number of successful extensions: 1922
Number of sequences better than 1.0e-05: 2
Number of HSP's better than 0.0 without gapping: 1713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1922
length of database: 17,774,539
effective HSP length: 97
effective length of database: 13,951,672
effective search space used: 1534683920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqMP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-003921
(625 letters)
Database: RefSeqMP
45,328 sequences; 21,768,885 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_034627.2| isocitrate dehydrogenase 1 (NADP+), soluble [Mu... 192 2e-49
Alignment gi|NP_766599.1| isocitrate dehydrogenase 2 (NADP+), mitochondri... 137 1e-32
>ref|NP_034627.2| isocitrate dehydrogenase 1 (NADP+), soluble [Mus musculus]
Length = 414
Score = 192 bits (488), Expect = 2e-49
Identities = 99/138 (71%), Positives = 109/138 (78%)
Frame = +3
Query: 198 MSQKIQGGSVVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLXIENRDATNDQVTKDA 377
MS+KIQGGSVVEMQGDEMTRIIWELIKEKLI PYVELDLHSYDL IENRDATNDQVTKDA
Sbjct: 1 MSRKIQGGSVVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDA 60
Query: 378 AEAI*KYNVGVKCATFTPDYNKVEEFXLKQMWK*PYVTILNILGGACMKKTIFSQNKPQL 557
AEA+ KYNVGVKCAT TPD +VEEF LKQMWK P TI NILGG ++ I +N P+L
Sbjct: 61 AEALKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRL 120
Query: 558 VISMGKAFFHCGNAFFEQ 611
V K +A+ +Q
Sbjct: 121 VTGWVKPIIIGRHAYGDQ 138
>ref|NP_766599.1| isocitrate dehydrogenase 2 (NADP+), mitochondrial [Mus musculus]
Length = 452
Score = 137 bits (344), Expect = 1e-32
Identities = 69/112 (61%), Positives = 83/112 (74%)
Frame = +3
Query: 225 VVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLXIENRDATNDQVTKDAAEAI*KYNV 404
VVEM GDEMTRIIW+ IKEKLI P+V++ L +DL + NRD TNDQVT D+A A KY+V
Sbjct: 50 VVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSV 109
Query: 405 GVKCATFTPDYNKVEEFXLKQMWK*PYVTILNILGGACMKKTIFSQNKPQLV 560
VKCAT TPD +VEEF LK+MWK P TI NILGG ++ I +N P+LV
Sbjct: 110 AVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLV 161
Database: RefSeqMP
Posted date: Aug 2, 2006 12:58 AM
Number of letters in database: 21,768,885
Number of sequences in database: 45,328
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,872,453
Number of Sequences: 45328
Number of extensions: 724560
Number of successful extensions: 2031
Number of sequences better than 1.0e-05: 2
Number of HSP's better than 0.0 without gapping: 1857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2028
length of database: 21,768,885
effective HSP length: 99
effective length of database: 17,281,413
effective search space used: 1866392604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)