BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-025018
(494 letters)
Database: RefSeqSP
1040 sequences; 434,620 total letters
Searching...done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001033712.1| guanine nucleotide-binding protein alpha q p... 86 7e-19
Alignment gi|NP_999477.1| alpha-stimulatory subunit of GTP-binding protei... 66 4e-13
>ref|NP_001033712.1| guanine nucleotide-binding protein alpha q polypeptide [Sus scrofa]
Length = 359
Score = 85.5 bits (210), Expect = 7e-19
Identities = 42/103 (40%), Positives = 62/103 (60%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
M C +S E K A + I++ LR D A RE+KLLLLG GESGKST +K M+IIH G
Sbjct: 7 MACCLSEEAKEARRINDEIERQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSG 66
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRENH 419
YS+E+ R + ++Y N + A++++ L I + + + H
Sbjct: 67 YSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAH 109
>ref|NP_999477.1| alpha-stimulatory subunit of GTP-binding protein [Sus scrofa]
Length = 397
Score = 66.2 bits (160), Expect = 4e-13
Identities = 38/106 (35%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Frame = +3
Query: 132 EDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDGYSEEECR 311
E+KA E +K I+K L++D + +LLLLGAGESGKSTIVK M+I+H +G++ +E
Sbjct: 15 EEKAQREANKKIEKQLQKDKQVYRATHRLLLLGAGESGKSTIVKQMRILHVNGFNGDEKA 74
Query: 312 QYRAVLYSNAIQSTMAIVKSPGNL--HIDFAHPFRENHPGHLITLM 443
+ +N ++ IV + NL ++ A+P + +++++M
Sbjct: 75 TKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVM 120
Database: RefSeqSP
Posted date: Aug 1, 2006 7:14 PM
Number of letters in database: 434,620
Number of sequences in database: 1040
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 383,082
Number of Sequences: 1040
Number of extensions: 8466
Number of successful extensions: 25
Number of sequences better than 1.0e-05: 2
Number of HSP's better than 0.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 434,620
effective HSP length: 70
effective length of database: 361,820
effective search space used: 34011080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqBP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-025018
(494 letters)
Database: RefSeqBP
33,508 sequences; 16,112,626 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001029849.1| hypothetical protein LOC539521 [Bos taurus] 161 2e-40
Alignment gi|NP_776749.1| adenylate cyclase-inhibiting G alpha protein [B... 160 3e-40
Alignment gi|NP_776750.1| guanine nucleotide binding protein (G protein),... 130 7e-31
Alignment gi|XP_870246.1| PREDICTED: similar to Guanine nucleotide-bindin... 126 9e-30
Alignment gi|NP_776751.1| guanine nucleotide binding protein (G protein),... 122 1e-28
Alignment gi|NP_851365.1| guanine nucleotide binding protein (G protein),... 108 2e-24
Alignment gi|XP_591161.2| PREDICTED: similar to Guanine nucleotide-bindin... 104 3e-23
Alignment gi|XP_589440.2| PREDICTED: similar to Guanine nucleotide-bindin... 102 1e-22
Alignment gi|NP_776748.1| guanine nucleotide binding protein (G protein),... 84 4e-17
Alignment gi|NP_776747.1| guanine nucleotide binding protein (G protein),... 82 3e-16
>ref|NP_001029849.1| hypothetical protein LOC539521 [Bos taurus]
Length = 354
Score = 161 bits (408), Expect = 2e-40
Identities = 81/116 (69%), Positives = 93/116 (80%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGCT+SAEDKAA ERSKMID+NLREDGEKAA+EVKLLLLGAGESGKSTIVK MKIIHEDG
Sbjct: 1 MGCTLSAEDKAAVERSKMIDRNLREDGEKAAKEVKLLLLGAGESGKSTIVKQMKIIHEDG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRENHPGHLITLMWRTEK 458
YSEEEC+QY+ V+YSN IQS +AI+++ G L IDF R + L L E+
Sbjct: 61 YSEEECKQYKVVVYSNTIQSIIAIIRAMGRLKIDFGEAARADDARQLFVLAGSAEE 116
>ref|NP_776749.1| adenylate cyclase-inhibiting G alpha protein [Bos taurus]
Length = 354
Score = 160 bits (406), Expect = 3e-40
Identities = 82/116 (70%), Positives = 93/116 (80%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGCT+SAEDKAA ERSKMID+NLREDGEKAAREVKLLLLGAGESGKSTIVK MKIIHE G
Sbjct: 1 MGCTLSAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEAG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRENHPGHLITLMWRTEK 458
YSEEEC+QY+AV+YSN IQS +AI+++ G L IDF R + L L E+
Sbjct: 61 YSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDSARADDARQLFVLAGAAEE 116
>ref|NP_776750.1| guanine nucleotide binding protein (G protein), alpha activating
activity polypeptide O [Bos taurus]
Length = 354
Score = 130 bits (326), Expect = 7e-31
Identities = 65/101 (64%), Positives = 82/101 (81%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGCT+SAE++AA ERSK I+KNL+EDG AA++VKLLLLGAGESGKSTIVK MKIIHEDG
Sbjct: 1 MGCTLSAEERAALERSKAIEKNLKEDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRE 413
+S E+ +QY+ V+YSN IQS AIV++ L I++ R+
Sbjct: 61 FSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGIEYGDKERK 101
>ref|XP_870246.1| PREDICTED: similar to Guanine nucleotide-binding protein G(t),
alpha-3 subunit (Gustducin alpha-3 chain) isoform 2 [Bos
taurus]
Length = 354
Score = 126 bits (316), Expect = 9e-30
Identities = 60/98 (61%), Positives = 80/98 (81%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MG +S+E K +A+RSK ++K L+ED E+ AR VKLLLLGAGESGKSTIVK MKIIH++G
Sbjct: 1 MGIGISSESKESAKRSKELEKKLQEDAERDARTVKLLLLGAGESGKSTIVKQMKIIHKNG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHP 404
YSE+EC +++AV+YSN +QS +AIVK+ L ID+ +P
Sbjct: 61 YSEQECMEFKAVIYSNTLQSILAIVKAMATLEIDYVNP 98
>ref|NP_776751.1| guanine nucleotide binding protein (G protein), alpha transducing
activity polypeptide 2 [Bos taurus]
Length = 354
Score = 122 bits (307), Expect = 1e-28
Identities = 59/96 (61%), Positives = 76/96 (79%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MG SAEDK A+RSK ++K L+ED +K A+ VKLLLLGAGESGKSTIVK MKIIH+DG
Sbjct: 1 MGSGASAEDKELAKRSKELEKKLQEDADKEAKTVKLLLLGAGESGKSTIVKQMKIIHQDG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFA 398
YS EEC +Y+A++Y N +QS +AI+++ L ID+A
Sbjct: 61 YSPEECLEYKAIIYGNVLQSILAIIRAMPTLGIDYA 96
>ref|NP_851365.1| guanine nucleotide binding protein (G protein), alpha transducing
activity polypeptide 1 [Bos taurus]
Length = 350
Score = 108 bits (271), Expect = 2e-24
Identities = 56/102 (54%), Positives = 74/102 (72%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MG SAE+K S+ ++K L+ED EK AR VKLLLLGAGESGKSTIVK MKIIH+DG
Sbjct: 1 MGAGASAEEK----HSRELEKKLKEDAEKDARTVKLLLLGAGESGKSTIVKQMKIIHQDG 56
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFREN 416
YS EEC ++ A++Y N +QS +AIV++ L+I + R++
Sbjct: 57 YSLEECLEFIAIIYGNTLQSILAIVRAMTTLNIQYGDSARQD 98
>ref|XP_591161.2| PREDICTED: similar to Guanine nucleotide-binding protein G(z),
alpha subunit (G(x) alpha chain) (Gz-alpha) [Bos taurus]
Length = 333
Score = 104 bits (260), Expect = 3e-23
Identities = 53/117 (45%), Positives = 74/117 (63%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGC S+E+K AA RS+ ID++LR + ++ RE+KLLLLG SGKST+VK MKI+H G
Sbjct: 1 MGCRQSSEEKEAARRSRRIDRHLRSESQRQRREIKLLLLGTSNSGKSTVVKQMKILHSGG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRENHPGHLITLMWRTEKQ 461
++ E CR+Y+ ++ NAI S IV++ L IDF +P R L L E +
Sbjct: 61 FNLEACREYKPLIVYNAIDSLTRIVRALAALKIDFHNPDRAYDAVQLFALTGPAESK 117
>ref|XP_589440.2| PREDICTED: similar to Guanine nucleotide-binding protein G(i),
alpha-2 subunit (Adenylate cyclase-inhibiting G alpha
protein) isoform 1 [Bos taurus]
Length = 328
Score = 102 bits (255), Expect = 1e-22
Identities = 53/58 (91%), Positives = 54/58 (93%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHE 284
MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVK M + E
Sbjct: 1 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKQMNTLLE 58
>ref|NP_776748.1| guanine nucleotide binding protein (G protein), alpha 14 [Bos
taurus]
Length = 355
Score = 84.3 bits (207), Expect = 4e-17
Identities = 40/93 (43%), Positives = 61/93 (65%)
Frame = +3
Query: 117 CTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDGYS 296
C +SAE+K + S I++ LR D + A RE+KLLLLG GESGKST +K M+IIH GYS
Sbjct: 5 CCLSAEEKESQRISAEIERQLRRDKKDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYS 64
Query: 297 EEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDF 395
+E+ + + ++Y N + A++++ L I +
Sbjct: 65 DEDRKGFTKLVYQNIFTAMQAMIRAMDTLKIQY 97
>ref|NP_776747.1| guanine nucleotide binding protein (G protein), alpha 11 (Gq class)
[Bos taurus]
Length = 353
Score = 81.6 bits (200), Expect = 3e-16
Identities = 42/93 (45%), Positives = 58/93 (62%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
M C +S E K + + I+K LR D A RE+KLLLLG GESGKST +K M+IIH G
Sbjct: 1 MACCLSDEVKESKRINAEIEKQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGAG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHI 389
YSEE+ R + ++Y N + A++++ L I
Sbjct: 61 YSEEDKRGFTKLVYQNIFTAMQAMIRAMETLKI 93
Database: RefSeqBP
Posted date: Aug 1, 2006 7:14 PM
Number of letters in database: 16,112,626
Number of sequences in database: 33,508
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,649,187
Number of Sequences: 33508
Number of extensions: 323415
Number of successful extensions: 1124
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 16,112,626
effective HSP length: 94
effective length of database: 12,962,874
effective search space used: 907401180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqHP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-025018
(494 letters)
Database: RefSeqHP
39,411 sequences; 17,774,539 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_002061.1| guanine nucleotide binding protein (G protein),... 182 1e-46
Alignment gi|NP_002060.4| guanine nucleotide binding protein (G protein),... 160 4e-40
Alignment gi|NP_006487.1| guanine nucleotide binding protein (G protein),... 160 5e-40
Alignment gi|NP_066268.1| guanine nucleotide binding protein, alpha activ... 130 7e-31
Alignment gi|NP_620073.1| guanine nucleotide binding protein, alpha activ... 130 7e-31
Alignment gi|NP_005263.1| guanine nucleotide binding protein, alpha trans... 124 5e-29
Alignment gi|NP_653082.1| guanine nucleotide binding protein, alpha trans... 108 2e-24
Alignment gi|NP_000163.2| guanine nucleotide binding protein, alpha trans... 108 2e-24
Alignment gi|NP_002064.1| guanine nucleotide binding protein, alpha z pol... 104 3e-23
Alignment gi|NP_002063.2| guanine nucleotide binding protein (G protein),... 86 2e-17
>ref|NP_002061.1| guanine nucleotide binding protein (G protein), alpha inhibiting
activity polypeptide 2 [Homo sapiens]
Length = 355
Score = 182 bits (462), Expect = 1e-46
Identities = 95/117 (81%), Positives = 99/117 (84%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVK MKIIHEDG
Sbjct: 1 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEDG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRENHPGHLITLMWRTEKQ 461
YSEEECRQYRAV+YSN IQS MAIVK+ GNL IDFA P R + L L E+Q
Sbjct: 61 YSEEECRQYRAVVYSNTIQSIMAIVKAMGNLQIDFADPSRADDARQLFALSCTAEEQ 117
>ref|NP_002060.4| guanine nucleotide binding protein (G protein), alpha inhibiting
activity polypeptide 1 [Homo sapiens]
Length = 354
Score = 160 bits (406), Expect = 4e-40
Identities = 82/116 (70%), Positives = 93/116 (80%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGCT+SAEDKAA ERSKMID+NLREDGEKAAREVKLLLLGAGESGKSTIVK MKIIHE G
Sbjct: 1 MGCTLSAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEAG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRENHPGHLITLMWRTEK 458
YSEEEC+QY+AV+YSN IQS +AI+++ G L IDF R + L L E+
Sbjct: 61 YSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDSARADDARQLFVLAGAAEE 116
>ref|NP_006487.1| guanine nucleotide binding protein (G protein), alpha inhibiting
activity polypeptide 3 [Homo sapiens]
Length = 354
Score = 160 bits (405), Expect = 5e-40
Identities = 80/116 (68%), Positives = 93/116 (80%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGCT+SAEDKAA ERSKMID+NLREDGEKAA+EVKLLLLGAGESGKSTIVK MKIIHEDG
Sbjct: 1 MGCTLSAEDKAAVERSKMIDRNLREDGEKAAKEVKLLLLGAGESGKSTIVKQMKIIHEDG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRENHPGHLITLMWRTEK 458
YSE+EC+QY+ V+YSN IQS +AI+++ G L IDF R + L L E+
Sbjct: 61 YSEDECKQYKVVVYSNTIQSIIAIIRAMGRLKIDFGEAARADDARQLFVLAGSAEE 116
>ref|NP_066268.1| guanine nucleotide binding protein, alpha activating polypeptide O
[Homo sapiens]
Length = 354
Score = 130 bits (326), Expect = 7e-31
Identities = 65/101 (64%), Positives = 82/101 (81%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGCT+SAE++AA ERSK I+KNL+EDG AA++VKLLLLGAGESGKSTIVK MKIIHEDG
Sbjct: 1 MGCTLSAEERAALERSKAIEKNLKEDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRE 413
+S E+ +QY+ V+YSN IQS AIV++ L I++ R+
Sbjct: 61 FSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGIEYGDKERK 101
>ref|NP_620073.1| guanine nucleotide binding protein, alpha activating polypeptide O
[Homo sapiens]
Length = 354
Score = 130 bits (326), Expect = 7e-31
Identities = 65/101 (64%), Positives = 82/101 (81%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGCT+SAE++AA ERSK I+KNL+EDG AA++VKLLLLGAGESGKSTIVK MKIIHEDG
Sbjct: 1 MGCTLSAEERAALERSKAIEKNLKEDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRE 413
+S E+ +QY+ V+YSN IQS AIV++ L I++ R+
Sbjct: 61 FSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGIEYGDKERK 101
>ref|NP_005263.1| guanine nucleotide binding protein, alpha transducing activity
polypeptide 2 [Homo sapiens]
Length = 354
Score = 124 bits (310), Expect = 5e-29
Identities = 59/98 (60%), Positives = 77/98 (78%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MG SAEDK A+RSK ++K L+ED +K A+ VKLLLLGAGESGKSTIVK MKIIH+DG
Sbjct: 1 MGSGASAEDKELAKRSKELEKKLQEDADKEAKTVKLLLLGAGESGKSTIVKQMKIIHQDG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHP 404
YS EEC +++A++Y N +QS +AI+++ L ID+A P
Sbjct: 61 YSPEECLEFKAIIYGNVLQSILAIIRAMTTLGIDYAEP 98
>ref|NP_653082.1| guanine nucleotide binding protein, alpha transducing activity
polypeptide 1 [Homo sapiens]
Length = 350
Score = 108 bits (271), Expect = 2e-24
Identities = 56/102 (54%), Positives = 74/102 (72%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MG SAE+K S+ ++K L+ED EK AR VKLLLLGAGESGKSTIVK MKIIH+DG
Sbjct: 1 MGAGASAEEK----HSRELEKKLKEDAEKDARTVKLLLLGAGESGKSTIVKQMKIIHQDG 56
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFREN 416
YS EEC ++ A++Y N +QS +AIV++ L+I + R++
Sbjct: 57 YSLEECLEFIAIIYGNTLQSILAIVRAMTTLNIQYGDSARQD 98
>ref|NP_000163.2| guanine nucleotide binding protein, alpha transducing activity
polypeptide 1 [Homo sapiens]
Length = 350
Score = 108 bits (271), Expect = 2e-24
Identities = 56/102 (54%), Positives = 74/102 (72%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MG SAE+K S+ ++K L+ED EK AR VKLLLLGAGESGKSTIVK MKIIH+DG
Sbjct: 1 MGAGASAEEK----HSRELEKKLKEDAEKDARTVKLLLLGAGESGKSTIVKQMKIIHQDG 56
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFREN 416
YS EEC ++ A++Y N +QS +AIV++ L+I + R++
Sbjct: 57 YSLEECLEFIAIIYGNTLQSILAIVRAMTTLNIQYGDSARQD 98
>ref|NP_002064.1| guanine nucleotide binding protein, alpha z polypeptide [Homo
sapiens]
Length = 355
Score = 104 bits (260), Expect = 3e-23
Identities = 53/117 (45%), Positives = 74/117 (63%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGC S+E+K AA RS+ ID++LR + ++ RE+KLLLLG SGKSTIVK MKIIH G
Sbjct: 1 MGCRQSSEEKEAARRSRRIDRHLRSESQRQRREIKLLLLGTSNSGKSTIVKQMKIIHSGG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRENHPGHLITLMWRTEKQ 461
++ E C++Y+ ++ NAI S I+++ L IDF +P R L L E +
Sbjct: 61 FNLEACKEYKPLIIYNAIDSLTRIIRALAALRIDFHNPDRAYDAVQLFALTGPAESK 117
>ref|NP_002063.2| guanine nucleotide binding protein (G protein), q polypeptide [Homo
sapiens]
Length = 359
Score = 85.5 bits (210), Expect = 2e-17
Identities = 42/103 (40%), Positives = 62/103 (60%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
M C +S E K A + I++ LR D A RE+KLLLLG GESGKST +K M+IIH G
Sbjct: 7 MACCLSEEAKEARRINDEIERQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSG 66
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRENH 419
YS+E+ R + ++Y N + A++++ L I + + + H
Sbjct: 67 YSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAH 109
Database: RefSeqHP
Posted date: Aug 2, 2006 12:57 AM
Number of letters in database: 17,774,539
Number of sequences in database: 39,411
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,633,085
Number of Sequences: 39411
Number of extensions: 376910
Number of successful extensions: 1297
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1292
length of database: 17,774,539
effective HSP length: 94
effective length of database: 14,069,905
effective search space used: 984893350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqCP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-025018
(494 letters)
Database: RefSeqCP
33,732 sequences; 19,266,565 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001003364.1| guanine nucleotide binding protein (G protei... 180 7e-46
Alignment gi|XP_863244.1| PREDICTED: similar to Guanine nucleotide-bindin... 131 4e-31
Alignment gi|XP_863225.1| PREDICTED: similar to Guanine nucleotide-bindin... 130 8e-31
Alignment gi|XP_863201.1| PREDICTED: similar to guanine nucleotide bindin... 130 8e-31
Alignment gi|XP_863178.1| PREDICTED: similar to guanine nucleotide bindin... 130 8e-31
Alignment gi|XP_851125.1| PREDICTED: similar to Guanine nucleotide-bindin... 130 8e-31
Alignment gi|XP_547240.2| PREDICTED: similar to Guanine nucleotide-bindin... 127 4e-30
Alignment gi|XP_849666.1| PREDICTED: similar to Guanine nucleotide-bindin... 124 3e-29
Alignment gi|NP_001003068.1| rod photoreceptor transducin alpha 1 subunit... 108 2e-24
Alignment gi|XP_848605.1| PREDICTED: similar to Guanine nucleotide-bindin... 104 5e-23
>ref|NP_001003364.1| guanine nucleotide binding protein (G protein), alpha inhibiting
activity polypeptide 2 [Canis familiaris]
Length = 355
Score = 180 bits (456), Expect = 7e-46
Identities = 94/117 (80%), Positives = 98/117 (83%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVK MKIIHEDG
Sbjct: 1 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEDG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRENHPGHLITLMWRTEKQ 461
YSEEECRQYRAV+YSN IQS MAIVK+ GNL IDF P R + L L E+Q
Sbjct: 61 YSEEECRQYRAVVYSNTIQSIMAIVKAMGNLQIDFDDPSRADDARQLFALSCTAEEQ 117
>ref|XP_863244.1| PREDICTED: similar to Guanine nucleotide-binding protein G(o),
alpha subunit 2 isoform 5 [Canis familiaris]
Length = 353
Score = 131 bits (329), Expect = 4e-31
Identities = 66/108 (61%), Positives = 85/108 (78%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGCT+SAE++AA ERSK I+KNL+EDG AA++VKLLLLGAGESGKSTIVK MKIIHEDG
Sbjct: 1 MGCTLSAEERAALERSKAIEKNLKEDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRENHPGHLI 434
+S E+ +QY+ V+YSN IQS AIV++ L I++ R++ L+
Sbjct: 61 FSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGIEYGDKERKHSARQLL 108
>ref|XP_863225.1| PREDICTED: similar to Guanine nucleotide-binding protein G(o),
alpha subunit 2 isoform 4 [Canis familiaris]
Length = 360
Score = 130 bits (326), Expect = 8e-31
Identities = 65/101 (64%), Positives = 82/101 (81%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGCT+SAE++AA ERSK I+KNL+EDG AA++VKLLLLGAGESGKSTIVK MKIIHEDG
Sbjct: 1 MGCTLSAEERAALERSKAIEKNLKEDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRE 413
+S E+ +QY+ V+YSN IQS AIV++ L I++ R+
Sbjct: 61 FSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGIEYGDKERK 101
>ref|XP_863201.1| PREDICTED: similar to guanine nucleotide binding protein, alpha
activating polypeptide O isoform 3 [Canis familiaris]
Length = 354
Score = 130 bits (326), Expect = 8e-31
Identities = 65/101 (64%), Positives = 82/101 (81%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGCT+SAE++AA ERSK I+KNL+EDG AA++VKLLLLGAGESGKSTIVK MKIIHEDG
Sbjct: 1 MGCTLSAEERAALERSKAIEKNLKEDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRE 413
+S E+ +QY+ V+YSN IQS AIV++ L I++ R+
Sbjct: 61 FSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGIEYGDKERK 101
>ref|XP_863178.1| PREDICTED: similar to guanine nucleotide binding protein, alpha
activating polypeptide O isoform 2 [Canis familiaris]
Length = 354
Score = 130 bits (326), Expect = 8e-31
Identities = 65/101 (64%), Positives = 82/101 (81%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGCT+SAE++AA ERSK I+KNL+EDG AA++VKLLLLGAGESGKSTIVK MKIIHEDG
Sbjct: 1 MGCTLSAEERAALERSKAIEKNLKEDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRE 413
+S E+ +QY+ V+YSN IQS AIV++ L I++ R+
Sbjct: 61 FSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGIEYGDKERK 101
>ref|XP_851125.1| PREDICTED: similar to Guanine nucleotide-binding protein G(o),
alpha subunit 2 isoform 1 [Canis familiaris]
Length = 354
Score = 130 bits (326), Expect = 8e-31
Identities = 65/101 (64%), Positives = 82/101 (81%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGCT+SAE++AA ERSK I+KNL+EDG AA++VKLLLLGAGESGKSTIVK MKIIHEDG
Sbjct: 1 MGCTLSAEERAALERSKAIEKNLKEDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRE 413
+S E+ +QY+ V+YSN IQS AIV++ L I++ R+
Sbjct: 61 FSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGIEYGDKERK 101
>ref|XP_547240.2| PREDICTED: similar to Guanine nucleotide-binding protein G(t),
alpha-2 subunit (Transducin alpha-2 chain) [Canis
familiaris]
Length = 354
Score = 127 bits (320), Expect = 4e-30
Identities = 61/98 (62%), Positives = 78/98 (79%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MG VSAEDK A+RSK ++K L+ED +K A+ VKLLLLGAGESGKSTIVK MKIIH+DG
Sbjct: 1 MGSGVSAEDKELAKRSKELEKKLQEDADKEAKTVKLLLLGAGESGKSTIVKQMKIIHQDG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHP 404
YS EEC +Y+A++Y N +QS +AI+++ L ID+A P
Sbjct: 61 YSPEECLEYKAIIYGNVLQSILAIIRAMSTLGIDYAEP 98
>ref|XP_849666.1| PREDICTED: similar to Guanine nucleotide-binding protein G(t),
alpha-3 subunit (Gustducin alpha-3 chain) isoform 3
[Canis familiaris]
Length = 354
Score = 124 bits (312), Expect = 3e-29
Identities = 60/98 (61%), Positives = 80/98 (81%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MG +S+E K +A+RSK ++K L+ED E+ AR VKLLLLGAGESGKSTIVK MKIIH++G
Sbjct: 1 MGSGISSESKESAKRSKELEKKLQEDAERDARTVKLLLLGAGESGKSTIVKQMKIIHKNG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHP 404
YSE+EC +++AV+YSN +QS +AIVK+ L ID+ +P
Sbjct: 61 YSEQECMEFKAVIYSNTLQSILAIVKAMTTLGIDYVNP 98
>ref|NP_001003068.1| rod photoreceptor transducin alpha 1 subunit [Canis familiaris]
Length = 350
Score = 108 bits (271), Expect = 2e-24
Identities = 56/102 (54%), Positives = 74/102 (72%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MG SAE+K S+ ++K L+ED EK AR VKLLLLGAGESGKSTIVK MKIIH+DG
Sbjct: 1 MGAGASAEEK----HSRELEKKLKEDAEKDARTVKLLLLGAGESGKSTIVKQMKIIHQDG 56
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFREN 416
YS EEC ++ A++Y N +QS +AIV++ L+I + R++
Sbjct: 57 YSLEECLEFIAIIYGNTLQSILAIVRAMTTLNIQYGDSARQD 98
>ref|XP_848605.1| PREDICTED: similar to Guanine nucleotide-binding protein G(z),
alpha subunit (G(x) alpha chain) (Gz-alpha) [Canis
familiaris]
Length = 355
Score = 104 bits (259), Expect = 5e-23
Identities = 53/117 (45%), Positives = 74/117 (63%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGC S+E+K AA RS+ ID++LR + ++ RE+KLLLLG SGKSTIVK MKIIH G
Sbjct: 1 MGCRQSSEEKEAARRSRRIDRHLRSESQRQRREIKLLLLGTSNSGKSTIVKQMKIIHSGG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRENHPGHLITLMWRTEKQ 461
++ E C++Y+ ++ NAI S I+++ L IDF +P R L L E +
Sbjct: 61 FNLEACKEYKPLIIYNAIDSLTRIIRALAALKIDFHNPDRAYDAVQLFALTGPAESK 117
Database: RefSeqCP
Posted date: Aug 1, 2006 9:25 PM
Number of letters in database: 19,266,565
Number of sequences in database: 33,732
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,260,022
Number of Sequences: 33732
Number of extensions: 380444
Number of successful extensions: 1382
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 1315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 19,266,565
effective HSP length: 95
effective length of database: 16,062,025
effective search space used: 1108279725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqMP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-025018
(494 letters)
Database: RefSeqMP
45,328 sequences; 21,768,885 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_032164.2| guanine nucleotide binding protein, alpha inhib... 182 2e-46
Alignment gi|NP_034435.1| guanine nucleotide binding protein, alpha inhib... 160 5e-40
Alignment gi|NP_034436.1| guanine nucleotide binding protein, alpha inhib... 160 6e-40
Alignment gi|NP_034438.1| guanine nucleotide binding protein, alpha o [Mu... 130 9e-31
Alignment gi|NP_032167.1| guanine nucleotide binding protein, alpha trans... 124 4e-29
Alignment gi|XP_144196.2| PREDICTED: guanine nucleotide binding protein, ... 123 8e-29
Alignment gi|XP_909761.1| PREDICTED: similar to Guanine nucleotide-bindin... 123 8e-29
Alignment gi|XP_988487.1| PREDICTED: similar to Guanine nucleotide-bindin... 123 8e-29
Alignment gi|XP_917413.2| PREDICTED: similar to Guanine nucleotide-bindin... 109 2e-24
Alignment gi|NP_032166.1| guanine nucleotide binding protein, alpha trans... 108 2e-24
>ref|NP_032164.2| guanine nucleotide binding protein, alpha inhibiting 2 [Mus
musculus]
Length = 355
Score = 182 bits (461), Expect = 2e-46
Identities = 95/117 (81%), Positives = 99/117 (84%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVK MKIIHEDG
Sbjct: 1 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEDG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRENHPGHLITLMWRTEKQ 461
YSEEECRQYRAV+YSN IQS MAIVK+ GNL IDFA P R + L L E+Q
Sbjct: 61 YSEEECRQYRAVVYSNTIQSIMAIVKAMGNLQIDFADPQRADDARQLFALSCAAEEQ 117
>ref|NP_034435.1| guanine nucleotide binding protein, alpha inhibiting 1 [Mus
musculus]
Length = 354
Score = 160 bits (406), Expect = 5e-40
Identities = 82/116 (70%), Positives = 93/116 (80%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGCT+SAEDKAA ERSKMID+NLREDGEKAAREVKLLLLGAGESGKSTIVK MKIIHE G
Sbjct: 1 MGCTLSAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEAG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRENHPGHLITLMWRTEK 458
YSEEEC+QY+AV+YSN IQS +AI+++ G L IDF R + L L E+
Sbjct: 61 YSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDSARADDARQLFVLAGAAEE 116
>ref|NP_034436.1| guanine nucleotide binding protein, alpha inhibiting 3 [Mus
musculus]
Length = 354
Score = 160 bits (405), Expect = 6e-40
Identities = 80/116 (68%), Positives = 93/116 (80%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGCT+SAEDKAA ERSKMID+NLREDGEKAA+EVKLLLLGAGESGKSTIVK MKIIHEDG
Sbjct: 1 MGCTLSAEDKAAVERSKMIDRNLREDGEKAAKEVKLLLLGAGESGKSTIVKQMKIIHEDG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRENHPGHLITLMWRTEK 458
YSE+EC+QY+ V+YSN IQS +AI+++ G L IDF R + L L E+
Sbjct: 61 YSEDECKQYKVVVYSNTIQSIIAIIRAMGRLKIDFGESARADDARQLFVLAGSAEE 116
>ref|NP_034438.1| guanine nucleotide binding protein, alpha o [Mus musculus]
Length = 354
Score = 130 bits (326), Expect = 9e-31
Identities = 66/115 (57%), Positives = 87/115 (75%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MGCT+SAE++AA ERSK I+KNL+EDG AA++VKLLLLGAGESGKSTIVK MKIIHEDG
Sbjct: 1 MGCTLSAEERAALERSKAIEKNLKEDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFRENHPGHLITLMWRTE 455
+S E+ +QY+ V+YSN IQS AIV++ L +++ R+ + ++ R E
Sbjct: 61 FSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGVEYGDKERKTDSKMVCDVVSRME 115
>ref|NP_032167.1| guanine nucleotide binding protein, alpha transducing 2 [Mus
musculus]
Length = 354
Score = 124 bits (312), Expect = 4e-29
Identities = 59/98 (60%), Positives = 77/98 (78%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MG +SAEDK A RSK ++K L+ED +K A+ VKLLLLGAGESGKSTIVK MKIIH+DG
Sbjct: 1 MGSGISAEDKELARRSKELEKKLQEDADKEAKTVKLLLLGAGESGKSTIVKQMKIIHQDG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHP 404
YS EEC ++++V+Y N +QS +AI+++ L ID+A P
Sbjct: 61 YSPEECLEFKSVIYGNVLQSILAIIRAMSTLGIDYAEP 98
>ref|XP_144196.2| PREDICTED: guanine nucleotide binding protein, alpha transducing 3
[Mus musculus]
Length = 354
Score = 123 bits (309), Expect = 8e-29
Identities = 59/98 (60%), Positives = 79/98 (80%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MG +S+E K +A RSK ++K L+ED E+ AR VKLLLLGAGESGKSTIVK MKIIH++G
Sbjct: 1 MGSGISSESKESARRSKELEKKLQEDAERDARTVKLLLLGAGESGKSTIVKQMKIIHKNG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHP 404
YS++EC +++AV+YSN +QS +AIVK+ L ID+ +P
Sbjct: 61 YSKQECMEFKAVIYSNTLQSILAIVKAMATLGIDYVNP 98
>ref|XP_909761.1| PREDICTED: similar to Guanine nucleotide-binding protein G(t),
alpha-3 subunit (Gustducin alpha-3 chain) [Mus musculus]
Length = 354
Score = 123 bits (309), Expect = 8e-29
Identities = 59/98 (60%), Positives = 79/98 (80%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MG +S+E K +A RSK ++K L+ED E+ AR VKLLLLGAGESGKSTIVK MKIIH++G
Sbjct: 1 MGSGISSESKESARRSKELEKKLQEDAERDARTVKLLLLGAGESGKSTIVKQMKIIHKNG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHP 404
YS++EC +++AV+YSN +QS +AIVK+ L ID+ +P
Sbjct: 61 YSKQECMEFKAVIYSNTLQSILAIVKAMATLGIDYVNP 98
>ref|XP_988487.1| PREDICTED: similar to Guanine nucleotide-binding protein G(t),
alpha-3 subunit (Gustducin alpha-3 chain) [Mus musculus]
Length = 354
Score = 123 bits (309), Expect = 8e-29
Identities = 59/98 (60%), Positives = 79/98 (80%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MG +S+E K +A RSK ++K L+ED E+ AR VKLLLLGAGESGKSTIVK MKIIH++G
Sbjct: 1 MGSGISSESKESARRSKELEKKLQEDAERDARTVKLLLLGAGESGKSTIVKQMKIIHKNG 60
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHP 404
YS++EC +++AV+YSN +QS +AIVK+ L ID+ +P
Sbjct: 61 YSKQECMEFKAVIYSNTLQSILAIVKAMATLGIDYVNP 98
>ref|XP_917413.2| PREDICTED: similar to Guanine nucleotide-binding protein G(i),
alpha-2 subunit (Adenylate cyclase-inhibiting G alpha
protein) [Mus musculus]
Length = 118
Score = 109 bits (272), Expect = 2e-24
Identities = 56/78 (71%), Positives = 60/78 (76%)
Frame = +3
Query: 228 GAGESGKSTIVKHMKIIHEDGYSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPF 407
GAGESGKSTIVK MKIIHEDGYSEEECRQYRAV+YSN IQS MAIVK+ GNL IDFA P
Sbjct: 4 GAGESGKSTIVKQMKIIHEDGYSEEECRQYRAVVYSNTIQSIMAIVKAMGNLQIDFADPQ 63
Query: 408 RENHPGHLITLMWRTEKQ 461
R + L L E+Q
Sbjct: 64 RADDARQLFALSCAAEEQ 81
>ref|NP_032166.1| guanine nucleotide binding protein, alpha transducing 1 [Mus
musculus]
Length = 350
Score = 108 bits (271), Expect = 2e-24
Identities = 56/102 (54%), Positives = 74/102 (72%)
Frame = +3
Query: 111 MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKHMKIIHEDG 290
MG SAE+K S+ ++K L+ED EK AR VKLLLLGAGESGKSTIVK MKIIH+DG
Sbjct: 1 MGAGASAEEK----HSRELEKKLKEDAEKDARTVKLLLLGAGESGKSTIVKQMKIIHQDG 56
Query: 291 YSEEECRQYRAVLYSNAIQSTMAIVKSPGNLHIDFAHPFREN 416
YS EEC ++ A++Y N +QS +AIV++ L+I + R++
Sbjct: 57 YSLEECLEFIAIIYGNTLQSILAIVRAMTTLNIQYGDSARQD 98
Database: RefSeqMP
Posted date: Aug 2, 2006 12:58 AM
Number of letters in database: 21,768,885
Number of sequences in database: 45,328
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,580,649
Number of Sequences: 45328
Number of extensions: 430674
Number of successful extensions: 1461
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 1377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1451
length of database: 21,768,885
effective HSP length: 95
effective length of database: 17,462,725
effective search space used: 1204928025
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)