Animal-Genome cDNA 20110601C-000130


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000130
         (1214 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_776804.1| 40S ribosomal protein SA [Bos taurus].               555   e-158
Alignment   gi|XP_002695310.1| PREDICTED: ribosomal protein SA-like [Bos ta...   270   2e-72

>ref|NP_776804.1| 40S ribosomal protein SA [Bos taurus].
          Length = 295

 Score =  555 bits (1431), Expect = e-158
 Identities = 273/295 (92%), Positives = 274/295 (92%)
 Frame = +3

Query: 231  MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 410
            MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL
Sbjct: 1    MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60

Query: 411  AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 590
            AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPG FTNQIQAAFREPR
Sbjct: 61   AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGNFTNQIQAAFREPR 120

Query: 591  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 770
            LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR
Sbjct: 121  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180

Query: 771  EVLRMRGTISREHPWEVMPDLYFYRDPXXXXXXXXXXXXXXXXXXXFQGEWTAPAPEFTA 950
            EVLRMRGTISREHPWEVMPDLYFYRDP                   FQGEWTAPAPEFTA
Sbjct: 181  EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTA 240

Query: 951  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPTTEDWSAAPTAQATEWVGTTTEWS 1115
             QPEVADWSEGVQVPSVPIQQFPTEDWSAQP+TEDWSAAPTAQATEWVGTTTEWS
Sbjct: 241  AQPEVADWSEGVQVPSVPIQQFPTEDWSAQPSTEDWSAAPTAQATEWVGTTTEWS 295


>ref|XP_002695310.1| PREDICTED: ribosomal protein SA-like [Bos taurus].
          Length = 168

 Score =  270 bits (690), Expect = 2e-72
 Identities = 139/150 (92%), Positives = 142/150 (94%), Gaps = 2/150 (1%)
 Frame = +3

Query: 369 YIINLKRTWE--KLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFT 542
           Y +NL + +   KLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFT
Sbjct: 13  YGMNLDQRFNICKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFT 72

Query: 543 PGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCN 722
           PGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCN
Sbjct: 73  PGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCN 132

Query: 723 NKGAHSVGLMWWMLAREVLRMRGTISREHP 812
           NKGAHSVGLMWWMLAREVLRMRGTISR  P
Sbjct: 133 NKGAHSVGLMWWMLAREVLRMRGTISRFIP 162


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 47,987,499
Number of extensions: 1363323
Number of successful extensions: 4608
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 4587
Number of HSP's successfully gapped: 2
Length of query: 404
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 299
Effective length of database: 14,207,134
Effective search space: 4247933066
Effective search space used: 4247933066
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000130
         (1214 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_860784.1| PREDICTED: similar to 40S ribosomal protein SA ...   559   e-159
Alignment   gi|XP_860746.1| PREDICTED: similar to 40S ribosomal protein SA ...   559   e-159
Alignment   gi|XP_860712.1| PREDICTED: similar to 40S ribosomal protein SA ...   559   e-159
Alignment   gi|XP_534228.1| PREDICTED: similar to 40S ribosomal protein SA ...   559   e-159
Alignment   gi|XP_850029.1| PREDICTED: similar to 40S ribosomal protein SA ...   559   e-159
Alignment   gi|XP_533909.1| PREDICTED: similar to 40S ribosomal protein SA ...   559   e-159
Alignment   gi|XP_860584.1| PREDICTED: similar to 40S ribosomal protein SA ...   551   e-157
Alignment   gi|XP_860646.1| PREDICTED: similar to 40S ribosomal protein SA ...   549   e-156
Alignment   gi|XP_866616.1| PREDICTED: similar to 40S ribosomal protein SA ...   543   e-154
Alignment   gi|XP_866603.1| PREDICTED: similar to 40S ribosomal protein SA ...   543   e-154

>ref|XP_860784.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa
            laminin receptor) (Colon carcinoma laminin-binding
            protein) (NEM/1CHD4) (Multidrug resistance-associated
            protein MGr1-Ag) isoform 14 [Canis familiaris].
          Length = 295

 Score =  559 bits (1440), Expect = e-159
 Identities = 275/295 (93%), Positives = 275/295 (93%)
 Frame = +3

Query: 231  MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 410
            MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL
Sbjct: 1    MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60

Query: 411  AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 590
            AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR
Sbjct: 61   AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120

Query: 591  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 770
            LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR
Sbjct: 121  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180

Query: 771  EVLRMRGTISREHPWEVMPDLYFYRDPXXXXXXXXXXXXXXXXXXXFQGEWTAPAPEFTA 950
            EVLRMRGTISREHPWEVMPDLYFYRDP                   FQGEWTAPAPEFTA
Sbjct: 181  EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTA 240

Query: 951  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPTTEDWSAAPTAQATEWVGTTTEWS 1115
            TQPEVADWSEGVQVPSVPIQQFPTEDWSAQP TEDWSAAPTAQATEWVGTTTEWS
Sbjct: 241  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDWSAAPTAQATEWVGTTTEWS 295


>ref|XP_860746.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa
            laminin receptor) (Colon carcinoma laminin-binding
            protein) (NEM/1CHD4) (Multidrug resistance-associated
            protein MGr1-Ag) isoform 13 [Canis familiaris].
          Length = 295

 Score =  559 bits (1440), Expect = e-159
 Identities = 275/295 (93%), Positives = 275/295 (93%)
 Frame = +3

Query: 231  MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 410
            MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL
Sbjct: 1    MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60

Query: 411  AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 590
            AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR
Sbjct: 61   AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120

Query: 591  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 770
            LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR
Sbjct: 121  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180

Query: 771  EVLRMRGTISREHPWEVMPDLYFYRDPXXXXXXXXXXXXXXXXXXXFQGEWTAPAPEFTA 950
            EVLRMRGTISREHPWEVMPDLYFYRDP                   FQGEWTAPAPEFTA
Sbjct: 181  EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTA 240

Query: 951  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPTTEDWSAAPTAQATEWVGTTTEWS 1115
            TQPEVADWSEGVQVPSVPIQQFPTEDWSAQP TEDWSAAPTAQATEWVGTTTEWS
Sbjct: 241  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDWSAAPTAQATEWVGTTTEWS 295


>ref|XP_860712.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa
            laminin receptor) (Colon carcinoma laminin-binding
            protein) (NEM/1CHD4) (Multidrug resistance-associated
            protein MGr1-Ag) isoform 12 [Canis familiaris].
          Length = 295

 Score =  559 bits (1440), Expect = e-159
 Identities = 275/295 (93%), Positives = 275/295 (93%)
 Frame = +3

Query: 231  MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 410
            MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL
Sbjct: 1    MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60

Query: 411  AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 590
            AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR
Sbjct: 61   AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120

Query: 591  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 770
            LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR
Sbjct: 121  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180

Query: 771  EVLRMRGTISREHPWEVMPDLYFYRDPXXXXXXXXXXXXXXXXXXXFQGEWTAPAPEFTA 950
            EVLRMRGTISREHPWEVMPDLYFYRDP                   FQGEWTAPAPEFTA
Sbjct: 181  EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTA 240

Query: 951  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPTTEDWSAAPTAQATEWVGTTTEWS 1115
            TQPEVADWSEGVQVPSVPIQQFPTEDWSAQP TEDWSAAPTAQATEWVGTTTEWS
Sbjct: 241  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDWSAAPTAQATEWVGTTTEWS 295


>ref|XP_534228.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa
            laminin receptor) (Colon carcinoma laminin-binding
            protein) (NEM/1CHD4) (Multidrug resistance-associated
            protein MGr1-Ag) isoform 1 [Canis familiaris].
          Length = 295

 Score =  559 bits (1440), Expect = e-159
 Identities = 275/295 (93%), Positives = 275/295 (93%)
 Frame = +3

Query: 231  MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 410
            MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL
Sbjct: 1    MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60

Query: 411  AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 590
            AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR
Sbjct: 61   AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120

Query: 591  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 770
            LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR
Sbjct: 121  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180

Query: 771  EVLRMRGTISREHPWEVMPDLYFYRDPXXXXXXXXXXXXXXXXXXXFQGEWTAPAPEFTA 950
            EVLRMRGTISREHPWEVMPDLYFYRDP                   FQGEWTAPAPEFTA
Sbjct: 181  EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTA 240

Query: 951  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPTTEDWSAAPTAQATEWVGTTTEWS 1115
            TQPEVADWSEGVQVPSVPIQQFPTEDWSAQP TEDWSAAPTAQATEWVGTTTEWS
Sbjct: 241  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDWSAAPTAQATEWVGTTTEWS 295


>ref|XP_850029.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa
            laminin receptor) (Colon carcinoma laminin-binding
            protein) (NEM/1CHD4) (Multidrug resistance-associated
            protein MGr1-Ag) isoform 2 [Canis familiaris].
          Length = 295

 Score =  559 bits (1440), Expect = e-159
 Identities = 275/295 (93%), Positives = 275/295 (93%)
 Frame = +3

Query: 231  MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 410
            MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL
Sbjct: 1    MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60

Query: 411  AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 590
            AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR
Sbjct: 61   AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120

Query: 591  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 770
            LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR
Sbjct: 121  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180

Query: 771  EVLRMRGTISREHPWEVMPDLYFYRDPXXXXXXXXXXXXXXXXXXXFQGEWTAPAPEFTA 950
            EVLRMRGTISREHPWEVMPDLYFYRDP                   FQGEWTAPAPEFTA
Sbjct: 181  EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTA 240

Query: 951  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPTTEDWSAAPTAQATEWVGTTTEWS 1115
            TQPEVADWSEGVQVPSVPIQQFPTEDWSAQP TEDWSAAPTAQATEWVGTTTEWS
Sbjct: 241  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDWSAAPTAQATEWVGTTTEWS 295


>ref|XP_533909.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa
            laminin receptor) (Colon carcinoma laminin-binding
            protein) (NEM/1CHD4) (Multidrug resistance-associated
            protein MGr1-Ag) isoform 1 [Canis familiaris].
          Length = 295

 Score =  559 bits (1440), Expect = e-159
 Identities = 275/295 (93%), Positives = 275/295 (93%)
 Frame = +3

Query: 231  MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 410
            MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL
Sbjct: 1    MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60

Query: 411  AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 590
            AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR
Sbjct: 61   AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120

Query: 591  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 770
            LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR
Sbjct: 121  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180

Query: 771  EVLRMRGTISREHPWEVMPDLYFYRDPXXXXXXXXXXXXXXXXXXXFQGEWTAPAPEFTA 950
            EVLRMRGTISREHPWEVMPDLYFYRDP                   FQGEWTAPAPEFTA
Sbjct: 181  EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTA 240

Query: 951  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPTTEDWSAAPTAQATEWVGTTTEWS 1115
            TQPEVADWSEGVQVPSVPIQQFPTEDWSAQP TEDWSAAPTAQATEWVGTTTEWS
Sbjct: 241  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDWSAAPTAQATEWVGTTTEWS 295


>ref|XP_860584.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa
            laminin receptor) (Colon carcinoma laminin-binding
            protein) (NEM/1CHD4) (Multidrug resistance-associated
            protein MGr1-Ag) isoform 9 [Canis familiaris].
          Length = 276

 Score =  551 bits (1419), Expect = e-157
 Identities = 273/295 (92%), Positives = 274/295 (92%)
 Frame = +3

Query: 231  MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 410
            MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL
Sbjct: 1    MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60

Query: 411  AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 590
            AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR
Sbjct: 61   AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120

Query: 591  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 770
            LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR
Sbjct: 121  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180

Query: 771  EVLRMRGTISREHPWEVMPDLYFYRDPXXXXXXXXXXXXXXXXXXXFQGEWTAPAPEFTA 950
            EVLRMRGTISREHPWEVMPDLYFYRDP                    +GEWTAPAPEFTA
Sbjct: 181  EVLRMRGTISREHPWEVMPDLYFYRDPE-------------------EGEWTAPAPEFTA 221

Query: 951  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPTTEDWSAAPTAQATEWVGTTTEWS 1115
            TQPEVADWSEGVQVPSVPIQQFPTEDWSAQP TEDWSAAPTAQATEWVGTTTEWS
Sbjct: 222  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDWSAAPTAQATEWVGTTTEWS 276


>ref|XP_860646.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa
            laminin receptor) (Colon carcinoma laminin-binding
            protein) (NEM/1CHD4) (Multidrug resistance-associated
            protein MGr1-Ag) isoform 11 [Canis familiaris].
          Length = 310

 Score =  549 bits (1414), Expect = e-156
 Identities = 275/310 (88%), Positives = 275/310 (88%), Gaps = 15/310 (4%)
 Frame = +3

Query: 231  MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 410
            MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL
Sbjct: 1    MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60

Query: 411  AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 590
            AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR
Sbjct: 61   AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120

Query: 591  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 770
            LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR
Sbjct: 121  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180

Query: 771  EVLRMRGTISREHPWEVMPDLYFYRDPXXXXXXXXXXXXXXXXXXXFQGEWTAPAPEFTA 950
            EVLRMRGTISREHPWEVMPDLYFYRDP                   FQGEWTAPAPEFTA
Sbjct: 181  EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTA 240

Query: 951  TQPEVADWSEGVQVPSVPIQQFPT---------------EDWSAQPTTEDWSAAPTAQAT 1085
            TQPEVADWSEGVQVPSVPIQQFPT               EDWSAQP TEDWSAAPTAQAT
Sbjct: 241  TQPEVADWSEGVQVPSVPIQQFPTGIGLALRVCPLKCVFEDWSAQPATEDWSAAPTAQAT 300

Query: 1086 EWVGTTTEWS 1115
            EWVGTTTEWS
Sbjct: 301  EWVGTTTEWS 310


>ref|XP_866616.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa
            laminin receptor) (Colon carcinoma laminin-binding
            protein) (NEM/1CHD4) (Multidrug resistance-associated
            protein MGr1-Ag) isoform 5 [Canis familiaris].
          Length = 295

 Score =  543 bits (1400), Expect = e-154
 Identities = 270/295 (91%), Positives = 270/295 (91%)
 Frame = +3

Query: 231  MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 410
            MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL
Sbjct: 1    MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60

Query: 411  AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 590
            AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR
Sbjct: 61   AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120

Query: 591  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 770
            LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPL YVDIAIPCNNKG HSVGLMWWMLAR
Sbjct: 121  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLCYVDIAIPCNNKGVHSVGLMWWMLAR 180

Query: 771  EVLRMRGTISREHPWEVMPDLYFYRDPXXXXXXXXXXXXXXXXXXXFQGEWTAPAPEFTA 950
            EVL MRGTIS EHPWEVMPDLYFYRDP                   FQGEWTAPAPEFTA
Sbjct: 181  EVLLMRGTISCEHPWEVMPDLYFYRDPEEIEKEEQATAEKAVTKEEFQGEWTAPAPEFTA 240

Query: 951  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPTTEDWSAAPTAQATEWVGTTTEWS 1115
            TQPEVADWSEGVQVPSVPIQQFPTEDWSAQP TEDWSAAPTAQATEWVGTTTE S
Sbjct: 241  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDWSAAPTAQATEWVGTTTECS 295


>ref|XP_866603.1| PREDICTED: similar to 40S ribosomal protein SA (p40) (34/67 kDa
            laminin receptor) (Colon carcinoma laminin-binding
            protein) (NEM/1CHD4) (Multidrug resistance-associated
            protein MGr1-Ag) isoform 4 [Canis familiaris].
          Length = 295

 Score =  543 bits (1400), Expect = e-154
 Identities = 270/295 (91%), Positives = 270/295 (91%)
 Frame = +3

Query: 231  MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 410
            MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL
Sbjct: 1    MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60

Query: 411  AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 590
            AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR
Sbjct: 61   AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120

Query: 591  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 770
            LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPL YVDIAIPCNNKG HSVGLMWWMLAR
Sbjct: 121  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLCYVDIAIPCNNKGVHSVGLMWWMLAR 180

Query: 771  EVLRMRGTISREHPWEVMPDLYFYRDPXXXXXXXXXXXXXXXXXXXFQGEWTAPAPEFTA 950
            EVL MRGTIS EHPWEVMPDLYFYRDP                   FQGEWTAPAPEFTA
Sbjct: 181  EVLLMRGTISCEHPWEVMPDLYFYRDPEEIEKEEQATAEKAVTKEEFQGEWTAPAPEFTA 240

Query: 951  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPTTEDWSAAPTAQATEWVGTTTEWS 1115
            TQPEVADWSEGVQVPSVPIQQFPTEDWSAQP TEDWSAAPTAQATEWVGTTTE S
Sbjct: 241  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDWSAAPTAQATEWVGTTTECS 295


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 49,897,546
Number of extensions: 1378938
Number of successful extensions: 4905
Number of sequences better than 1.0e-05: 32
Number of HSP's gapped: 4811
Number of HSP's successfully gapped: 37
Length of query: 404
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 299
Effective length of database: 15,374,224
Effective search space: 4596892976
Effective search space used: 4596892976
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000130
         (1214 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_002286.2| 40S ribosomal protein SA [Homo sapiens].             556   e-158
Alignment   gi|NP_001012321.1| 40S ribosomal protein SA [Homo sapiens].          556   e-158

>ref|NP_002286.2| 40S ribosomal protein SA [Homo sapiens].
          Length = 295

 Score =  556 bits (1432), Expect = e-158
 Identities = 273/295 (92%), Positives = 274/295 (92%)
 Frame = +3

Query: 231  MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 410
            MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL
Sbjct: 1    MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60

Query: 411  AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 590
            AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR
Sbjct: 61   AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120

Query: 591  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 770
            LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR
Sbjct: 121  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180

Query: 771  EVLRMRGTISREHPWEVMPDLYFYRDPXXXXXXXXXXXXXXXXXXXFQGEWTAPAPEFTA 950
            EVLRMRGTISREHPWEVMPDLYFYRDP                   FQGEWTAPAPEFTA
Sbjct: 181  EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTA 240

Query: 951  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPTTEDWSAAPTAQATEWVGTTTEWS 1115
            TQPEVADWSEGVQVPSVPIQQFPTEDWSAQP TEDWSAAPTAQATEWVG TT+WS
Sbjct: 241  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDWSAAPTAQATEWVGATTDWS 295


>ref|NP_001012321.1| 40S ribosomal protein SA [Homo sapiens].
          Length = 295

 Score =  556 bits (1432), Expect = e-158
 Identities = 273/295 (92%), Positives = 274/295 (92%)
 Frame = +3

Query: 231  MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 410
            MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL
Sbjct: 1    MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60

Query: 411  AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 590
            AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR
Sbjct: 61   AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120

Query: 591  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 770
            LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR
Sbjct: 121  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180

Query: 771  EVLRMRGTISREHPWEVMPDLYFYRDPXXXXXXXXXXXXXXXXXXXFQGEWTAPAPEFTA 950
            EVLRMRGTISREHPWEVMPDLYFYRDP                   FQGEWTAPAPEFTA
Sbjct: 181  EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTA 240

Query: 951  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPTTEDWSAAPTAQATEWVGTTTEWS 1115
            TQPEVADWSEGVQVPSVPIQQFPTEDWSAQP TEDWSAAPTAQATEWVG TT+WS
Sbjct: 241  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDWSAAPTAQATEWVGATTDWS 295


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 49,009,272
Number of extensions: 1356626
Number of successful extensions: 4556
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 4529
Number of HSP's successfully gapped: 2
Length of query: 404
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 299
Effective length of database: 14,835,944
Effective search space: 4435947256
Effective search space used: 4435947256
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000130
         (1214 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003086186.1| PREDICTED: 40S ribosomal protein SA-like [Mu...   555   e-158
Alignment   gi|NP_035159.3| 40S ribosomal protein SA [Mus musculus].             555   e-158
Alignment   gi|XP_921694.1| PREDICTED: 40S ribosomal protein SA-like isofor...   527   e-150

>ref|XP_003086186.1| PREDICTED: 40S ribosomal protein SA-like [Mus musculus].
          Length = 295

 Score =  555 bits (1430), Expect = e-158
 Identities = 273/295 (92%), Positives = 273/295 (92%)
 Frame = +3

Query: 231  MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 410
            MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL
Sbjct: 1    MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60

Query: 411  AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 590
            AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR
Sbjct: 61   AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120

Query: 591  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 770
            LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR
Sbjct: 121  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180

Query: 771  EVLRMRGTISREHPWEVMPDLYFYRDPXXXXXXXXXXXXXXXXXXXFQGEWTAPAPEFTA 950
            EVLRMRGTISREHPWEVMPDLYFYRDP                   FQGEWTAPAPEFTA
Sbjct: 181  EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTA 240

Query: 951  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPTTEDWSAAPTAQATEWVGTTTEWS 1115
             QPEVADWSEGVQVPSVPIQQFPTEDWSAQP TEDWSAAPTAQATEWVG TTEWS
Sbjct: 241  AQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDWSAAPTAQATEWVGATTEWS 295


>ref|NP_035159.3| 40S ribosomal protein SA [Mus musculus].
          Length = 295

 Score =  555 bits (1430), Expect = e-158
 Identities = 273/295 (92%), Positives = 273/295 (92%)
 Frame = +3

Query: 231  MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 410
            MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL
Sbjct: 1    MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60

Query: 411  AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 590
            AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR
Sbjct: 61   AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120

Query: 591  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 770
            LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR
Sbjct: 121  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180

Query: 771  EVLRMRGTISREHPWEVMPDLYFYRDPXXXXXXXXXXXXXXXXXXXFQGEWTAPAPEFTA 950
            EVLRMRGTISREHPWEVMPDLYFYRDP                   FQGEWTAPAPEFTA
Sbjct: 181  EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTA 240

Query: 951  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPTTEDWSAAPTAQATEWVGTTTEWS 1115
             QPEVADWSEGVQVPSVPIQQFPTEDWSAQP TEDWSAAPTAQATEWVG TTEWS
Sbjct: 241  AQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDWSAAPTAQATEWVGATTEWS 295


>ref|XP_921694.1| PREDICTED: 40S ribosomal protein SA-like isoform 1 [Mus musculus].
          Length = 295

 Score =  527 bits (1357), Expect = e-150
 Identities = 260/295 (88%), Positives = 264/295 (89%)
 Frame = +3

Query: 231  MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 410
            MS AL+VLQMKEEDV KFLAAGTHLGGTNL+FQMEQYIYKRKSDGIYIINLKRTWEKLLL
Sbjct: 1    MSRALNVLQMKEEDVFKFLAAGTHLGGTNLEFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60

Query: 411  AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 590
            AARA+VAIENP DVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR
Sbjct: 61   AARAVVAIENPPDVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120

Query: 591  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 770
            LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVD+AIPCNNKGAHSVGLM WMLAR
Sbjct: 121  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDMAIPCNNKGAHSVGLMKWMLAR 180

Query: 771  EVLRMRGTISREHPWEVMPDLYFYRDPXXXXXXXXXXXXXXXXXXXFQGEWTAPAPEFTA 950
            EVL MRGTISREHPWEVMPDLYFYRDP                   FQGEWT PAPEFTA
Sbjct: 181  EVLCMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTTPAPEFTA 240

Query: 951  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPTTEDWSAAPTAQATEWVGTTTEWS 1115
             QPEVA WSEGVQ PSVPIQQFP EDWSAQP TEDWSAAPTAQATEWVG TTEWS
Sbjct: 241  AQPEVAHWSEGVQAPSVPIQQFPMEDWSAQPATEDWSAAPTAQATEWVGATTEWS 295


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 41,493,085
Number of extensions: 1144989
Number of successful extensions: 3808
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 3785
Number of HSP's successfully gapped: 3
Length of query: 404
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 300
Effective length of database: 12,493,815
Effective search space: 3748144500
Effective search space used: 3748144500
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000130
         (1214 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001032223.1| 40S ribosomal protein SA [Sus scrofa].            561   e-160

>ref|NP_001032223.1| 40S ribosomal protein SA [Sus scrofa].
          Length = 295

 Score =  561 bits (1445), Expect = e-160
 Identities = 276/295 (93%), Positives = 276/295 (93%)
 Frame = +3

Query: 231  MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 410
            MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL
Sbjct: 1    MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60

Query: 411  AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 590
            AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR
Sbjct: 61   AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120

Query: 591  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 770
            LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR
Sbjct: 121  LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180

Query: 771  EVLRMRGTISREHPWEVMPDLYFYRDPXXXXXXXXXXXXXXXXXXXFQGEWTAPAPEFTA 950
            EVLRMRGTISREHPWEVMPDLYFYRDP                   FQGEWTAPAPEFTA
Sbjct: 181  EVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTA 240

Query: 951  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPTTEDWSAAPTAQATEWVGTTTEWS 1115
            TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPTTEDWSAAPTAQATEWVGTTTEWS
Sbjct: 241  TQPEVADWSEGVQVPSVPIQQFPTEDWSAQPTTEDWSAAPTAQATEWVGTTTEWS 295


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 31,138,936
Number of extensions: 904112
Number of successful extensions: 3061
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 3044
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 11,343,932
Length adjustment: 101
Effective length of query: 303
Effective length of database: 8,829,335
Effective search space: 2675288505
Effective search space used: 2675288505
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000130
         (1214 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr06                                                        1624   0.0  
Sscrofa_Chr17                                                        1285   0.0  
Sscrofa_Chr01                                                        1187   0.0  
Sscrofa_Chr03                                                         940   0.0  
Sscrofa_Chr12                                                         932   0.0  
gb|GL894387.2| Sus scrofa unplaced genomic scaffold ChrUScaf2271      844   0.0  
Sscrofa_Chr14                                                         829   0.0  
Sscrofa_Chr09                                                         829   0.0  
Sscrofa_Chr02                                                         615   e-173
Sscrofa_Chr04                                                         599   e-168

>Sscrofa_Chr06 
||          Length = 157765593

 Score = 1624 bits (819), Expect = 0.0
 Identities = 979/1030 (95%), Gaps = 8/1030 (0%)
 Strand = Plus / Plus

                                                                             
Query: 153       cctttccgcgctgcccagaccggggtccatacggcgttgttcttgattcccgtcgtaact 212
                 |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 113006061 cctttccgcgctgctcagaccggggtccatagggcgttgttcttgattcccgtcgtaact 113006120

                                                                             
Query: 213       taaagggagactttcacaatgtccggagccctcgatgtcctgcaaatgaaagaggaggat 272
                 |||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 113006121 taaagggaaactttcacaatgtccagagccctcgatgtcttgcaaatgaaagaggaggat 113006180

                                                                             
Query: 273       gtcctcaagttccttgcagcaggaacccaccttggtggcaccaaccttgacttccaaatg 332
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 113006181 gtcctcaagttccttgcagcaggaacccaccttggtggcaccaaccttgacttccaaagg 113006240

                                                                             
Query: 333       gaacagtacatctacaaaaggaaaagtgatggcatctacatcataaatctgaagagaacc 392
                 ||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||
Sbjct: 113006241 gaacagtacatctacaaaaggaaaagtgatggcatctatgtcataaatctgcagagaacc 113006300

                                                                             
Query: 393       tgggagaaacttctgttggcggctcgtgccatcgttgccattgaaaacccagccgatgtc 452
                 |||||||| |||||||||| |||||||||| | |||||||||||||||||||| ||||||
Sbjct: 113006301 tgggagaagcttctgttggtggctcgtgccgttgttgccattgaaaacccagctgatgtc 113006360

                                                                             
Query: 453       agtgtcatatcctccaggaatactggccagcgagctgtgctgaagtttgctgctgccact 512
                 |||||||||||||||||||| ||||||||||||||||||||     |||||||||| |||
Sbjct: 113006361 agtgtcatatcctccaggaacactggccagcgagctgtgct-----ttgctgctgctact 113006415

                                                                             
Query: 513       ggagccactcctattgctggccgcttcactcctggaaccttcactaaccagatccaggca 572
                 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 113006416 ggagccactcctattgctggcctcttcactcctggaaccttcactaaccagatccaggca 113006475

                                                                             
Query: 573       gccttccgggagccaagacttctggtggttactgatcccagggctgaccaccagcctctc 632
                 |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 113006476 gccttccgggagccgagacttctggttgttactgatcccagggctgaccaccagcctctc 113006535

                                                                             
Query: 633       acagaggcctcttatgttaacctgcctaccattgctctgtgtaacacagactcacctctg 692
                 |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 113006536 acagaggcctcttacgttaacctgcctgccattgctctgtgtaacacagactcacctctg 113006595

                                                                             
Query: 693       cgttatgtggacattgccatcccgtgcaacaacaagggagctcactcagtgggtctgatg 752
                 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 113006596 cgttatgtggacattgccatcccgtgcaacaaaaagggagctctctcagtgggtctgatg 113006655

                                                                             
Query: 753       tggtggatgctcgcccgggaagttctgcgcatgcgtggcaccatctcccgggaacaccca 812
                 |||||||||||| ||| ||||||||||||||||||||||| || |||| | |||||||||
Sbjct: 113006656 tggtggatgctcacccaggaagttctgcgcatgcgtggcatcacctcctgtgaacaccca 113006715

                                                                             
Query: 813       tgggaagtcatgcctgacctctacttctacagagatcctgaagagattgaaaaggaagag 872
                 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 113006716 tgggaagtcatgcctgacctctccttctacagagatcctgaagagattgaaaaggaagag 113006775

                                                                             
Query: 873       caggccgcagctgagaaggctgtgaccaaggaggaatttcagggtgaatggactgcgcca 932
                 |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113006776 caggcttcagctgagaaggctgtgaccaaggaggaatttcagggtgaatggactgcgcca 113006835

                                                                             
Query: 933       gctcctgagttcactgccactcaacctgaggtggcagattggtccgaaggtgtgcaggtg 992
                 ||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 113006836 gctcctga--tcactgccactcaacctgaggtggcaaattggtccgaaggtgtgcaggtg 113006893

                                                                             
Query: 993       ccttctgtgcccatccagcaattccctactgaagattggagtgctcagcctaccactgaa 1052
                 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 113006894 ccttctgtgcccatccagcaattccctgctgaagattggagtgctcagcctaccactgaa 113006953

                                                                             
Query: 1053      gattggtctgcagctcccactgcgcaggccactgaatgggtaggaacaaccactgagtgg 1112
                 ||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||| |
Sbjct: 113006954 gattggtctgcagttcccactgtgcaggccactgaatgggtaggaacagccactgagttg 113007013

                                                                             
Query: 1113      tcttaagttcttccatgaactctt-attttctaaaaatagaagtgagttggatgtaaaat 1171
                 |||||||||||||||||||||||| | |||||||||||||||||| |||| || ||||||
Sbjct: 113007014 tcttaagttcttccatgaactcttaagtttctaaaaatagaagtgggttgaatataaaat 113007073

                           
Query: 1172      aaacattttc 1181
                 ||||| ||||
Sbjct: 113007074 aaacagtttc 113007083



 Score = 1624 bits (819), Expect = 0.0
 Identities = 979/1030 (95%), Gaps = 8/1030 (0%)
 Strand = Plus / Plus

                                                                             
Query: 153       cctttccgcgctgcccagaccggggtccatacggcgttgttcttgattcccgtcgtaact 212
                 |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 113111723 cctttccgcgctgctcagaccggggtccatagggcgttgttcttgattcccgtcgtaact 113111782

                                                                             
Query: 213       taaagggagactttcacaatgtccggagccctcgatgtcctgcaaatgaaagaggaggat 272
                 |||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 113111783 taaagggaaactttcacaatgtccagagccctcgatgtcttgcaaatgaaagaggaggat 113111842

                                                                             
Query: 273       gtcctcaagttccttgcagcaggaacccaccttggtggcaccaaccttgacttccaaatg 332
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 113111843 gtcctcaagttccttgcagcaggaacccaccttggtggcaccaaccttgacttccaaagg 113111902

                                                                             
Query: 333       gaacagtacatctacaaaaggaaaagtgatggcatctacatcataaatctgaagagaacc 392
                 ||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||
Sbjct: 113111903 gaacagtacatctacaaaaggaaaagtgatggcatctatgtcataaatctgcagagaacc 113111962

                                                                             
Query: 393       tgggagaaacttctgttggcggctcgtgccatcgttgccattgaaaacccagccgatgtc 452
                 |||||||| |||||||||| |||||||||| | |||||||||||||||||||| ||||||
Sbjct: 113111963 tgggagaagcttctgttggtggctcgtgccgttgttgccattgaaaacccagctgatgtc 113112022

                                                                             
Query: 453       agtgtcatatcctccaggaatactggccagcgagctgtgctgaagtttgctgctgccact 512
                 |||||||||||||||||||| ||||||||||||||||||||     |||||||||| |||
Sbjct: 113112023 agtgtcatatcctccaggaacactggccagcgagctgtgct-----ttgctgctgctact 113112077

                                                                             
Query: 513       ggagccactcctattgctggccgcttcactcctggaaccttcactaaccagatccaggca 572
                 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 113112078 ggagccactcctattgctggcctcttcactcctggaaccttcactaaccagatccaggca 113112137

                                                                             
Query: 573       gccttccgggagccaagacttctggtggttactgatcccagggctgaccaccagcctctc 632
                 |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 113112138 gccttccgggagccgagacttctggttgttactgatcccagggctgaccaccagcctctc 113112197

                                                                             
Query: 633       acagaggcctcttatgttaacctgcctaccattgctctgtgtaacacagactcacctctg 692
                 |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 113112198 acagaggcctcttacgttaacctgcctgccattgctctgtgtaacacagactcacctctg 113112257

                                                                             
Query: 693       cgttatgtggacattgccatcccgtgcaacaacaagggagctcactcagtgggtctgatg 752
                 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 113112258 cgttatgtggacattgccatcccgtgcaacaaaaagggagctctctcagtgggtctgatg 113112317

                                                                             
Query: 753       tggtggatgctcgcccgggaagttctgcgcatgcgtggcaccatctcccgggaacaccca 812
                 |||||||||||| ||| ||||||||||||||||||||||| || |||| | |||||||||
Sbjct: 113112318 tggtggatgctcacccaggaagttctgcgcatgcgtggcatcacctcctgtgaacaccca 113112377

                                                                             
Query: 813       tgggaagtcatgcctgacctctacttctacagagatcctgaagagattgaaaaggaagag 872
                 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 113112378 tgggaagtcatgcctgacctctccttctacagagatcctgaagagattgaaaaggaagag 113112437

                                                                             
Query: 873       caggccgcagctgagaaggctgtgaccaaggaggaatttcagggtgaatggactgcgcca 932
                 |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113112438 caggcttcagctgagaaggctgtgaccaaggaggaatttcagggtgaatggactgcgcca 113112497

                                                                             
Query: 933       gctcctgagttcactgccactcaacctgaggtggcagattggtccgaaggtgtgcaggtg 992
                 ||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 113112498 gctcctga--tcactgccactcaacctgaggtggcaaattggtccgaaggtgtgcaggtg 113112555

                                                                             
Query: 993       ccttctgtgcccatccagcaattccctactgaagattggagtgctcagcctaccactgaa 1052
                 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 113112556 ccttctgtgcccatccagcaattccctgctgaagattggagtgctcagcctaccactgaa 113112615

                                                                             
Query: 1053      gattggtctgcagctcccactgcgcaggccactgaatgggtaggaacaaccactgagtgg 1112
                 ||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||| |
Sbjct: 113112616 gattggtctgcagttcccactgtgcaggccactgaatgggtaggaacagccactgagttg 113112675

                                                                             
Query: 1113      tcttaagttcttccatgaactctt-attttctaaaaatagaagtgagttggatgtaaaat 1171
                 |||||||||||||||||||||||| | |||||||||||||||||| |||| || ||||||
Sbjct: 113112676 tcttaagttcttccatgaactcttaagtttctaaaaatagaagtgggttgaatataaaat 113112735

                           
Query: 1172      aaacattttc 1181
                 ||||| ||||
Sbjct: 113112736 aaacagtttc 113112745



 Score =  474 bits (239), Expect = e-131
 Identities = 616/745 (82%), Gaps = 35/745 (4%)
 Strand = Plus / Minus

                                                                             
Query: 239       agccctcgatgtcctgcaaatgaaagaggaggatgtcctcaagttccttgcagcaggaac 298
                 |||||| ||||||||||| || || || ||||||   ||||||| | |||||||||||| 
Sbjct: 134197925 agcccttgatgtcctgcatataaaggaagaggat---ctcaagtcctttgcagcaggaat 134197869

                                                                             
Query: 299       ccaccttggtggcaccaaccttgacttccaaatggaacagtacatctacaaaaggaaaag 358
                 |||| | ||||||||  |||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 134197868 ccacttaggtggcactgaccttgacttccaagtggaacagtacatctataaaaggaaaag 134197809

                                                                             
Query: 359       tgatggcatctacatcataaatctgaagagaacctgggagaaacttctgttggcggctcg 418
                 | ||||| ||||||||||||| ||||||||||||||| |||  ||||||||||| |||| 
Sbjct: 134197808 taatggcctctacatcataaacctgaagagaacctggaagatgcttctgttggcagctca 134197749

                                                                             
Query: 419       tgccatcgttgccattgaaaacccagccgatgtcagtgtcatatcctccaggaatactgg 478
                 || ||| | ||| || ||||||||||| ||| |||||||||||||||||||||| |||||
Sbjct: 134197748 tgtcattgctgctatggaaaacccagctgatatcagtgtcatatcctccaggaacactgg 134197689

                                                                             
Query: 479       ccagcgagctgtgctgaagtttgctgctgccactggagccactcctattgctggccgctt 538
                 |||  |||||||||||| ||||||||||||||                  |||||  |||
Sbjct: 134197688 ccaaggagctgtgctgacgtttgctgctgcca------------------ctggcttctt 134197647

                                                                             
Query: 539       cactcctggaaccttcactaaccagatccaggcagccttccgggagccaagacttctggt 598
                 | |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| 
Sbjct: 134197646 ccctcctggaaccttcgctaaccagatccaggcagctttccgggagccaagacttctgga 134197587

                                                                             
Query: 599       ggttactgatcccagggctgaccaccagcctctcacagaggcctcttatgttaacctgcc 658
                 ||||||  |||||||||||  ||||||| |||||  |||||||||||   ||  ||||||
Sbjct: 134197586 ggttaccaatcccagggcttcccaccagtctctcctagaggcctcttgcattcgcctgcc 134197527

                                                                             
Query: 659       taccattgctctgtgtaacacagactcacctctgcgttatgtggacattgccatcccgtg 718
                 | ||||||||| ||||||||||||||| ||||||||||||||||||||||| ||| | ||
Sbjct: 134197526 tgccattgctccgtgtaacacagactctcctctgcgttatgtggacattgctatctcatg 134197467

                                                                             
Query: 719       caacaacaagggagctcactcagtgggtc-tgatgtggtggatgctcgcccgggaagttc 777
                 |||||||||||||||        |||| | ||||      ||||||| || |||| ||||
Sbjct: 134197466 caacaacaagggagc-------atgggacatgat------gatgctcacctgggaggttc 134197420

                                                                             
Query: 778       tgcgcatgcgtggcaccatctcccgggaacacccatgggaagtcatgcctgacctctact 837
                 || ||||||   |  |||||||| | |||||||||  ||| ||||||||||| | || ||
Sbjct: 134197419 tgagcatgctctgtgccatctcctgtgaacacccacaggaggtcatgcctgatcgctgct 134197360

                                                                             
Query: 838       tctacagagatcctgaagagattgaaaaggaagagcaggccgcagctgagaaggctgtga 897
                 |||   |||||| ||||||| || ||||||| |||||||| ||||||||||| |||||||
Sbjct: 134197359 tcttgggagatcttgaagaggttaaaaaggaggagcaggcagcagctgagaaagctgtga 134197300

                                                                             
Query: 898       ccaaggaggaatttcagggtgaatggactgcgccagctcctgagttcactgccactcaac 957
                 |||||||||||||||||||| ||||||| || |||||| ||||||||||||| | ||| |
Sbjct: 134197299 ccaaggaggaatttcagggtaaatggacggctccagcttctgagttcactgctattcagc 134197240

                                          
Query: 958       ctgaggtggcagattggtccgaagg 982
                 ||||||||||||| ||||| |||||
Sbjct: 134197239 ctgaggtggcagactggtctgaagg 134197215



 Score =  333 bits (168), Expect = 1e-88
 Identities = 580/714 (81%), Gaps = 20/714 (2%)
 Strand = Plus / Plus

                                                                             
Query: 252       ctgcaaatgaaagaggaggatgtcctcaagttccttgcagcaggaacccaccttggtggc 311
                 ||||||||||| || | ||| |||||||| |||||| |||  | || |||||| | ||||
Sbjct: 111604905 ctgcaaatgaaggaaggggaagtcctcaaattccttacagaggaaatccacctagatggc 111604964

                                                                             
Query: 312       accaaccttgacttccaaatggaacagtacatctacaaaaggaaaagtgatggcatctac 371
                  |||||||  ||||||||||| |||||| |  | ||||| |||||| || ||||||||| 
Sbjct: 111604965 gccaacctcaacttccaaatgcaacagtcc--ccacaaagggaaaactggtggcatctat 111605022

                                                                             
Query: 372       atcataaatctgaagagaacctgggagaaacttctgttggcggctcgtgccatcgttgcc 431
                  || ||| ||| || |||| |||||||||  |||||   || ||| ||||||| | | ||
Sbjct: 111605023 gtcgtaagtctaaaaagaatctgggagaaggttctg---gcagcttgtgccattgatacc 111605079

                                                                             
Query: 432       attgaaaacccagccgatgtcagtgtcatatcctccaggaatactggccagcgagctgtg 491
                 ||||||||| |  | ||||||| |||||||||||| |||| |||||  |||| |||||||
Sbjct: 111605080 attgaaaactcgactgatgtcactgtcatatcctctaggagtactgaacagcaagctgtg 111605139

                                                                             
Query: 492       ctgaagtttgctgctgccactggagccactcctattgctggccgcttcactcctggaacc 551
                 || ||||||||||||||||||||||||||||||||||||  | |   |  ||||||||| 
Sbjct: 111605140 ctaaagtttgctgctgccactggagccactcctattgctcactgtgccgttcctggaact 111605199

                                                                             
Query: 552       ttcactaaccagatccaggcagccttccgggagccaagacttctggtggttactgatccc 611
                 |||||||  |||||||| |||| ||||| |||||  |||||||||| |||||||||||||
Sbjct: 111605200 ttcactaggcagatccaagcaggcttccaggagcagagacttctgg-ggttactgatccc 111605258

                                                                             
Query: 612       agggctgaccaccagcctctcacagaggcctcttatgttaacctgcctaccattgctctg 671
                 ||||||||||| ||||||||||           ||||||||||||| |||| ||||||||
Sbjct: 111605259 agggctgaccagcagcctctca-----------tatgttaacctgcttacctttgctctg 111605307

                                                                             
Query: 672       tgtaacacagactcacctctgcgttatgtggacattgccatcccgtgcaa--caacaagg 729
                  |||||||||||||| ||||| | | | ||||||||||||| || |||||  ||||||||
Sbjct: 111605308 agtaacacagactcaactctgtgctctatggacattgccattccctgcaattcaacaagg 111605367

                                                                             
Query: 730       gagctcactcagtgggtctgatgtggtggatgctcgcccgggaagttctgcgcatgcgtg 789
                  ||||||||||||||||||||||||||||||||  ||  |||||||||||| | || |||
Sbjct: 111605368 aagctcactcagtgggtctgatgtggtggatgccagct-gggaagttctgcccttgtgtg 111605426

                                                                             
Query: 790       gcaccatctcccgggaacacccatgggaagtcatgcctgacctctacttctacagagatc 849
                  || | ||||||| || ||||||  ||| ||||||||  | ||||||||| ||| ||| |
Sbjct: 111605427 acatcctctcccgtgagcacccacaggaggtcatgccccatctctacttccacacagacc 111605486

                                                                             
Query: 850       ctgaagagattgaaaaggaagagcaggccgcagctgagaaggctgtgaccaaggaggaat 909
                 | ||||||| |||| ||||||||||||| || ||| | ||  ||||||||||||||||||
Sbjct: 111605487 cggaagagactgaagaggaagagcaggctgccgctaaaaacactgtgaccaaggaggaat 111605546

                                                                       
Query: 910       ttcagggtgaatggactgcgccagctcctgagttcactgccactcaacctgagg 963
                 ||| |||| ||||||| |  | ||||||||| || ||||| ||| || ||||||
Sbjct: 111605547 ttcggggtaaatggacagttctagctcctgaatttactgctacttaaactgagg 111605600



 Score =  222 bits (112), Expect = 3e-55
 Identities = 112/112 (100%)
 Strand = Plus / Minus

                                                                          
Query: 38     gaacgcagctagctgcgagaattaatgtgaattgcaggacacattgatcatcgacacttc 97
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872658 gaacgcagctagctgcgagaattaatgtgaattgcaggacacattgatcatcgacacttc 872599

                                                                  
Query: 98     gaacgcacttgcggccccgggttcctcccggggctacgcctgtctgagcgtc 149
              ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872598 gaacgcacttgcggccccgggttcctcccggggctacgcctgtctgagcgtc 872547



 Score =  103 bits (52), Expect = 2e-19
 Identities = 152/180 (84%), Gaps = 4/180 (2%)
 Strand = Plus / Minus

                                                                             
Query: 451       tcagtgtcatatcctccaggaatactggccagcgagctgtgctgaagtttgctgctgcca 510
                 ||||||||| ||||||  |||| ||||||||| | ||||| |  ||||||||||||| ||
Sbjct: 138656572 tcagtgtcacatcctctgggaacactggccagagggctgttccaaagtttgctgctgtca 138656513

                                                                             
Query: 511       ctggagccactcctattgctggccgcttcactcctggaaccttcactaaccagatccagg 570
                 | ||||| || |||||||||| | || || ||||||| || |||||||||||| |||| |
Sbjct: 138656512 c-ggagctacccctattgctg-ctgcctctctcctggcacgttcactaaccaggtccaag 138656455

                                                                             
Query: 571       cagccttccgggagccaagacttctggtggttactgatcccagggctgaccaccagcctc 630
                 ||||||||| || |||| | ||| |||||||| ||||||||||||||| |||||||||||
Sbjct: 138656454 cagccttccagg-gccacgtctt-tggtggttcctgatcccagggctgcccaccagcctc 138656397


>Sscrofa_Chr17 
||          Length = 69701581

 Score = 1285 bits (648), Expect = 0.0
 Identities = 899/980 (91%), Gaps = 2/980 (0%)
 Strand = Plus / Minus

                                                                            
Query: 154      ctttccgcgctgcccagaccggggtccatacggcgttgttcttgattcccgtcgtaactt 213
                ||||| ||||| ||||||| ||||||||||||| |||||||  || |||| | |||||||
Sbjct: 35639978 ctttctgcgctacccagacaggggtccatacggtgttgttcccgactcccttggtaactt 35639919

                                                                            
Query: 214      aaagggagactttcacaatgtccggagccctcgatgtcctgcaaatgaaagaggaggatg 273
                ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||||||| 
Sbjct: 35639918 aaagggaaactttcacaatatctggagcccttgatgtcctgcaaatgaaagaggaggata 35639859

                                                                            
Query: 274      tcctcaagttccttgcagcaggaacccaccttggtggcaccaaccttgacttccaaatgg 333
                ||||||| ||||||||||||| |||||||||  ||||||||||||||||||||| ||| |
Sbjct: 35639858 tcctcaaattccttgcagcagaaacccacctaagtggcaccaaccttgacttcccaatag 35639799

                                                                            
Query: 334      aacagtacatctacaaaaggaaaagtgatggcatctacatcataaatctgaagagaacct 393
                |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 35639798 aacagtacatctaccaaaggaaaagtgatggcatctacatcataaatctgaagaaagcct 35639739

                                                                            
Query: 394      gggagaaacttctgttggcggctcgtgccatcgttgccattgaaaacccagccgatgtca 453
                |||||||| || |  |||| |||| |||||| ||||||| ||||||||||||  ||||||
Sbjct: 35639738 gggagaaattt-taatggctgctcatgccattgttgccagtgaaaacccagctaatgtca 35639680

                                                                            
Query: 454      gtgtcatatcctccaggaatactggccagcgagctgtgctgaagtttgctgctgccactg 513
                ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||
Sbjct: 35639679 gtgtcatatcctccaggaatactgctcagagagctgtgctgaagtttgctgctgccactg 35639620

                                                                            
Query: 514      gagccactcctattgctggccgcttcactcctggaaccttcactaaccagatccaggcag 573
                ||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||
Sbjct: 35639619 gagccactcctattgctggccgctttattcctggaaccctcactaaccagatccaggtag 35639560

                                                                            
Query: 574      ccttccgggagccaagacttctggtggttactgatcccagggctgaccaccagcctctca 633
                ||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 35639559 ccttctgggagccaagacttctggtggttactgatccaagggctgagcaccagcctctca 35639500

                                                                            
Query: 634      cagaggcctcttatgttaacctgcctaccattgctctgtgtaacacagactcacctctgc 693
                |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 35639499 cagaggcctcttatgttaacctgcctaccattgctctgtgtaacacagactctcctctgc 35639440

                                                                            
Query: 694      gttatgtggacattgccatcccgtgcaacaacaagggagctcactcagtgggtctgatgt 753
                 ||| ||||||||||| |||||||||||||||||| |||||  ||||||||||||||| |
Sbjct: 35639439 attacgtggacattgctatcccgtgcaacaacaagagagcttgctcagtgggtctgatat 35639380

                                                                            
Query: 754      ggtggatgctcgcccgggaagttctgcgcatgcgtggcaccatctcccgggaacacccat 813
                ||||| |||| |||||||||||||  |||||| |||||||||||||| | ||||||||| 
Sbjct: 35639379 ggtgggtgcttgcccgggaagttccacgcatgtgtggcaccatctcctgtgaacacccag 35639320

                                                                            
Query: 814      gggaagtcatgcctgacctctacttctacagagatcctgaagagattgaaaaggaagagc 873
                 ||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 35639319 aggaagtcatgcctgatctctacttcga-agagatcctgaagagattgaaaaggaagagc 35639261

                                                                            
Query: 874      aggccgcagctgagaaggctgtgaccaaggaggaatttcagggtgaatggactgcgccag 933
                |||| || |||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 35639260 aggcagctgctgagaaggatgtgaccaaggaggaatttcagggtgaatggactgctccag 35639201

                                                                            
Query: 934      ctcctgagttcactgccactcaacctgaggtggcagattggtccgaaggtgtgcaggtgc 993
                |||||||||||||||| |||||||||||||||||||||||||| |||||  |||||||||
Sbjct: 35639200 ctcctgagttcactgctactcaacctgaggtggcagattggtctgaaggcctgcaggtgc 35639141

                                                                            
Query: 994      cttctgtgcccatccagcaattccctactgaagattggagtgctcagcctaccactgaag 1053
                | ||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||
Sbjct: 35639140 cctctgtgcccatccagcagttccctactgaagactggagtgctcagcctgccactgaag 35639081

                                                                            
Query: 1054     attggtctgcagctcccactgcgcaggccactgaatgggtaggaacaaccactgagtggt 1113
                ||||||||| |||||||||| | ||||||||||||||||||||||  |||||||||||||
Sbjct: 35639080 attggtctgaagctcccacttctcaggccactgaatgggtaggaatgaccactgagtggt 35639021

                                    
Query: 1114     cttaagttcttccatgaact 1133
                ||||||||||||||| ||||
Sbjct: 35639020 cttaagttcttccataaact 35639001



 Score = 1285 bits (648), Expect = 0.0
 Identities = 899/980 (91%), Gaps = 2/980 (0%)
 Strand = Plus / Plus

                                                                            
Query: 154      ctttccgcgctgcccagaccggggtccatacggcgttgttcttgattcccgtcgtaactt 213
                ||||| ||||| ||||||| ||||||||||||| |||||||  || |||| | |||||||
Sbjct: 35825021 ctttctgcgctacccagacaggggtccatacggtgttgttcccgactcccttggtaactt 35825080

                                                                            
Query: 214      aaagggagactttcacaatgtccggagccctcgatgtcctgcaaatgaaagaggaggatg 273
                ||||||| ||||||||||| || |||||||| ||||||||||||||||||||||||||| 
Sbjct: 35825081 aaagggaaactttcacaatatctggagcccttgatgtcctgcaaatgaaagaggaggata 35825140

                                                                            
Query: 274      tcctcaagttccttgcagcaggaacccaccttggtggcaccaaccttgacttccaaatgg 333
                ||||||| ||||||||||||| |||||||||  ||||||||||||||||||||| ||| |
Sbjct: 35825141 tcctcaaattccttgcagcagaaacccacctaagtggcaccaaccttgacttcccaatag 35825200

                                                                            
Query: 334      aacagtacatctacaaaaggaaaagtgatggcatctacatcataaatctgaagagaacct 393
                |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 35825201 aacagtacatctaccaaaggaaaagtgatggcatctacatcataaatctgaagaaagcct 35825260

                                                                            
Query: 394      gggagaaacttctgttggcggctcgtgccatcgttgccattgaaaacccagccgatgtca 453
                |||||||| || |  |||| |||| |||||| ||||||| ||||||||||||  ||||||
Sbjct: 35825261 gggagaaattt-taatggctgctcatgccattgttgccagtgaaaacccagctaatgtca 35825319

                                                                            
Query: 454      gtgtcatatcctccaggaatactggccagcgagctgtgctgaagtttgctgctgccactg 513
                ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||
Sbjct: 35825320 gtgtcatatcctccaggaatactgctcagagagctgtgctgaagtttgctgctgccactg 35825379

                                                                            
Query: 514      gagccactcctattgctggccgcttcactcctggaaccttcactaaccagatccaggcag 573
                ||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||
Sbjct: 35825380 gagccactcctattgctggccgctttattcctggaaccctcactaaccagatccaggtag 35825439

                                                                            
Query: 574      ccttccgggagccaagacttctggtggttactgatcccagggctgaccaccagcctctca 633
                ||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 35825440 ccttctgggagccaagacttctggtggttactgatccaagggctgagcaccagcctctca 35825499

                                                                            
Query: 634      cagaggcctcttatgttaacctgcctaccattgctctgtgtaacacagactcacctctgc 693
                |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 35825500 cagaggcctcttatgttaacctgcctaccattgctctgtgtaacacagactctcctctgc 35825559

                                                                            
Query: 694      gttatgtggacattgccatcccgtgcaacaacaagggagctcactcagtgggtctgatgt 753
                 ||| ||||||||||| |||||||||||||||||| |||||  ||||||||||||||| |
Sbjct: 35825560 attacgtggacattgctatcccgtgcaacaacaagagagcttgctcagtgggtctgatat 35825619

                                                                            
Query: 754      ggtggatgctcgcccgggaagttctgcgcatgcgtggcaccatctcccgggaacacccat 813
                ||||| |||| |||||||||||||  |||||| |||||||||||||| | ||||||||| 
Sbjct: 35825620 ggtgggtgcttgcccgggaagttccacgcatgtgtggcaccatctcctgtgaacacccag 35825679

                                                                            
Query: 814      gggaagtcatgcctgacctctacttctacagagatcctgaagagattgaaaaggaagagc 873
                 ||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 35825680 aggaagtcatgcctgatctctacttcga-agagatcctgaagagattgaaaaggaagagc 35825738

                                                                            
Query: 874      aggccgcagctgagaaggctgtgaccaaggaggaatttcagggtgaatggactgcgccag 933
                |||| || |||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 35825739 aggcagctgctgagaaggatgtgaccaaggaggaatttcagggtgaatggactgctccag 35825798

                                                                            
Query: 934      ctcctgagttcactgccactcaacctgaggtggcagattggtccgaaggtgtgcaggtgc 993
                |||||||||||||||| |||||||||||||||||||||||||| |||||  |||||||||
Sbjct: 35825799 ctcctgagttcactgctactcaacctgaggtggcagattggtctgaaggcctgcaggtgc 35825858

                                                                            
Query: 994      cttctgtgcccatccagcaattccctactgaagattggagtgctcagcctaccactgaag 1053
                | ||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||
Sbjct: 35825859 cctctgtgcccatccagcagttccctactgaagactggagtgctcagcctgccactgaag 35825918

                                                                            
Query: 1054     attggtctgcagctcccactgcgcaggccactgaatgggtaggaacaaccactgagtggt 1113
                ||||||||| |||||||||| | ||||||||||||||||||||||  |||||||||||||
Sbjct: 35825919 attggtctgaagctcccacttctcaggccactgaatgggtaggaatgaccactgagtggt 35825978

                                    
Query: 1114     cttaagttcttccatgaact 1133
                ||||||||||||||| ||||
Sbjct: 35825979 cttaagttcttccataaact 35825998



 Score =  555 bits (280), Expect = e-155
 Identities = 730/877 (83%), Gaps = 6/877 (0%)
 Strand = Plus / Plus

                                                                            
Query: 199      ttcccgtcgtaacttaaagggagactttcacaatgtccggagccctcgatgtcctgcaaa 258
                ||||| || |||||| |||||| |||||||||||||  || ||||   ||||||||||||
Sbjct: 23694315 ttcccatcataactttaagggaaactttcacaatgttgggggccccaaatgtcctgcaaa 23694374

                                                                            
Query: 259      tgaaagaggaggatgtcctcaagttccttgcagcaggaacccaccttggtggcaccaacc 318
                 ||    ||| ||||||||||| |||||| |||||||||||||| | |||||||||| | 
Sbjct: 23694375 gga----ggaagatgtcctcaaattccttacagcaggaacccacttaggtggcaccagct 23694430

                                                                            
Query: 319      ttgacttccaaatggaacagtacatctacaaaaggaaaagtgatggcatctacatcataa 378
                |||| ||||||||||||||||  |||||| |||||| |||||||||||||| |||| |||
Sbjct: 23694431 ttgatttccaaatggaacagtttatctaccaaaggagaagtgatggcatctgcatcttaa 23694490

                                                                            
Query: 379      atctgaagagaacctgggagaaacttctgttggcggctcgtgccatcgttgccattgaaa 438
                |||||  | |||  |||||| | ||| || |||| ||| ||||| | || ||||||||||
Sbjct: 23694491 atctggcgggaatgtgggaggagcttttgatggcagcttgtgcccttgtggccattgaaa 23694550

                                                                            
Query: 439      acccagccgatgtcagtgtcatatcctccaggaatactggccagcgagctgtgctgaagt 498
                ||| ||   ||||||||| | |||| || ||||||  || || || | ||| |||| | |
Sbjct: 23694551 acctaggtaatgtcagtgacctatcgtctaggaatcgtgacccgctaactgggctgca-t 23694609

                                                                            
Query: 499      ttgctgctgccactggagccactcctattgctggccgcttcactcctggaaccttcacta 558
                ||||||||||| ||||||||||||||| ||||||  || |||||||||||   | |||||
Sbjct: 23694610 ttgctgctgcctctggagccactcctactgctgggtgcatcactcctggactatccacta 23694669

                                                                            
Query: 559      accagatccaggcagccttccgggagccaagacttctggtggttactgatcccagggctg 618
                |||||||||||||||||| | ||||||| ||||| |  ||||||||||||||||||||||
Sbjct: 23694670 accagatccaggcagcctcctgggagcccagactcccagtggttactgatcccagggctg 23694729

                                                                            
Query: 619      accaccagcctctcacagaggcctcttatgttaacctgcctaccattgctctgtgtaaca 678
                 |||||| |||||| |||||  |||||||||| ||||| |     |||||||||||||| 
Sbjct: 23694730 cccaccaacctctctcagagttctcttatgttcacctgaccgatgttgctctgtgtaact 23694789

                                                                            
Query: 679      cagactcacctctgcgttatgtggacattgccatcccgtgcaacaacaagggagctcact 738
                ||||| | ||||  | |||||||||  ||| ||||| ||||||||||||| | |||||||
Sbjct: 23694790 cagaccctcctccacattatgtggatgttgtcatcctgtgcaacaacaagagggctcact 23694849

                                                                            
Query: 739      cagtgggtctgatgtggtggatgctcgcccgggaagttctgcgcatgcgtggcaccatct 798
                ||||||||||| | |||||||||||| ||| |||||||||| ||||| ||||||||||||
Sbjct: 23694850 cagtgggtctggtatggtggatgctcacccaggaagttctgagcatgtgtggcaccatct 23694909

                                                                            
Query: 799      cccgggaacacccatgggaagtcatgcctgacctctacttctacagagatcctgaagaga 858
                |||  |||||| ||||| | ||||||||||| ||||||||||||||||||||| || |||
Sbjct: 23694910 cccatgaacactcatggaaggtcatgcctgatctctacttctacagagatcctaaaaaga 23694969

                                                                            
Query: 859      ttgaaaaggaagagcaggccgcagctgagaaggctgtgaccaaggaggaatttcagggtg 918
                ||| ||||||||||||||  || |||||||| |   |||| |||||||||||||||||||
Sbjct: 23694970 ttggaaaggaagagcaggaggctgctgagaaagtgatgactaaggaggaatttcagggtg 23695029

                                                                            
Query: 919      aatggactgcgccagctcctgagttcactgccactcaacctgaggtggcagattggtccg 978
                |||||||  | ||| ||||||||||||||||  | || |||||||| ||||| ||| | |
Sbjct: 23695030 aatggaccactcca-ctcctgagttcactgctgcccagcctgaggttgcagactggcctg 23695088

                                                                            
Query: 979      aaggtgtgcaggtgccttctgtgcccatccagcaattccctactgaagattggagtgctc 1038
                 |||||||||||||||  |||||||||||||||| ||||| |||||  |||||||  |||
Sbjct: 23695089 caggtgtgcaggtgccccctgtgcccatccagcatttccccactgacaattggagccctc 23695148

                                                     
Query: 1039     agcctaccactgaagattggtctgcagctcccactgc 1075
                ||||| |||| ||||| |||||||| |||||||||||
Sbjct: 23695149 agcctgccaccgaagactggtctgctgctcccactgc 23695185



 Score =  107 bits (54), Expect = 1e-20
 Identities = 105/122 (86%)
 Strand = Plus / Plus

                                                                            
Query: 451      tcagtgtcatatcctccaggaatactggccagcgagctgtgctgaagtttgctgctgcca 510
                ||||||||| | || ||||||| ||||||| ||||||| ||| ||||||||||   ||  
Sbjct: 55065239 tcagtgtcacacccaccaggaagactggccggcgagctatgccgaagtttgctctggctg 55065298

                                                                            
Query: 511      ctggagccactcctattgctggccgcttcactcctggaaccttcactaaccagatccagg 570
                ||||||||||||||||| ||||| ||||| ||||| |||||||| |||||||||||||||
Sbjct: 55065299 ctggagccactcctatttctggctgcttcgctcctagaaccttcgctaaccagatccagg 55065358

                  
Query: 571      ca 572
                ||
Sbjct: 55065359 ca 55065360



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                           
Query: 888     aaggctgtgaccaaggaggaatttcagggtgaatggactgcgccagctcctgagttcact 947
               ||||||||| ||| ||||||||||||||| | |||||| || |||||||||||||| |||
Sbjct: 4629093 aaggctgtgcccagggaggaatttcagggaggatggacggctccagctcctgagtttact 4629034

                 
Query: 948     gc 949
               ||
Sbjct: 4629033 gc 4629032



 Score = 61.9 bits (31), Expect = 8e-07
 Identities = 64/75 (85%)
 Strand = Plus / Minus

                                                                           
Query: 568     aggcagccttccgggagccaagacttctggtggttactgatcccagggctgaccaccagc 627
               |||||||||||||  |||  |||  ||||| |||| ||||||||||  ||||||||||||
Sbjct: 4629380 aggcagccttccgaaagctgagatgtctgggggttgctgatcccagcactgaccaccagc 4629321

                              
Query: 628     ctctcacagaggcct 642
               |||||| ||||||||
Sbjct: 4629320 ctctcatagaggcct 4629306


>Sscrofa_Chr01 
||          Length = 315321322

 Score = 1187 bits (599), Expect = 0.0
 Identities = 878/965 (90%), Gaps = 12/965 (1%)
 Strand = Plus / Minus

                                                                             
Query: 174       ggggtccatacggcgttgttcttgattcccgtcgtaacttaaagggagactttcacaatg 233
                 ||||||||||| |||||||||||||||||| || | ||||||||||| ||||| ||||||
Sbjct: 263614268 ggggtccatacagcgttgttcttgattcccatcatgacttaaagggaaactttgacaatg 263614209

                                                                             
Query: 234       tccggagccctcgatgtcctgcaaatgaaagaggaggatgtcctcaagttccttgcagca 293
                 || |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 263614208 tctggagcccttgatgtcctgcaaatgaaagaggaggatgtcctcaaattccttgcagca 263614149

                                                                             
Query: 294       ggaacccaccttggtggcaccaaccttgacttccaaatggaacagtacatctacaaaagg 353
                  |||||||||| |||| ||||||||||||||||||||||| |||||  || || | ||||
Sbjct: 263614148 agaacccacctaggtgtcaccaaccttgacttccaaatggcacagtctatgtaaagaagg 263614089

                                                                             
Query: 354       aaaagtgatggcatctacatcataaatctgaagagaacctgggagaaacttctgttggcg 413
                 ||||| ||| ||||||| ||||||| ||||||||||||||||||||| |||||||||| |
Sbjct: 263614088 aaaagggatagcatctatatcataa-tctgaagagaacctgggagaa-cttctgttggtg 263614031

                                                                             
Query: 414       gctcgtgccatcgttgccattgaaaacccagccgatgtcagtgtcatatcctccaggaat 473
                 ||||||||||| ||||||| |||| | ||||| |||||||||||||||||||||||||||
Sbjct: 263614030 gctcgtgccattgttgccactgaagatccagctgatgtcagtgtcatatcctccaggaat 263613971

                                                                             
Query: 474       actggccagcgagctgtgctgaagtttgctgctgccactgg-agccactcctattgctgg 532
                 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 263613970 actggccatcgagctgtgctgaagtttgctgctgccactgggagccactcctattgctgg 263613911

                                                                             
Query: 533       ccgcttcactcctggaaccttcactaaccagatccaggcagccttccgggagccaagact 592
                 ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 263613910 ccgcttcactcctggaaacttcactaaccagatccaggcagccttctgggagccaaga-t 263613852

                                                                             
Query: 593       tctggtggttactgatcccagggctgaccaccagcctctcacagaggcctcttatgttaa 652
                 ||||||||| ||||||||||||||||||||||||| ||||||||| | ||||||||||||
Sbjct: 263613851 tctggtggtgactgatcccagggctgaccaccagcatctcacagaagtctcttatgttaa 263613792

                                                                             
Query: 653       cctgcctaccattgctctgtgtaacacagactcacctctgcgttatgtggacattgccat 712
                 |||||||||||||||||||||||||| |||||| ||||||| ||||| |||||| |||||
Sbjct: 263613791 cctgcctaccattgctctgtgtaacaaagactctcctctgcattatgcggacatagccat 263613732

                                                                             
Query: 713       cccgtgcaacaacaagggagctcactcagtgggtctgatgtggtggatgctcgcccggga 772
                 ||| || |||||| ||| |||||||||||||| |||||| ||| ||||||| ||||||||
Sbjct: 263613731 cccatgaaacaacgaggaagctcactcagtgg-tctgatctggcggatgcttgcccggga 263613673

                                                                             
Query: 773       agttctgcgcatgcgtggcaccatctcccgggaacacccatgggaagtcatgcctgacct 832
                 |||||||||||||| |||||||||||| || |||||||  ||||||||||||||| |  |
Sbjct: 263613672 agttctgcgcatgcctggcaccatctctcgtgaacaccagtgggaagtcatgcctcattt 263613613

                                                                             
Query: 833       ctacttctacagagatcctgaagagattgaaaaggaagagcaggccgcagctgagaaggc 892
                  |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 263613612 ttacttctacagagatcctgaagagattgaaaaggaagagcaggcagctgctgagaaggc 263613553

                                                                             
Query: 893       tgtgaccaaggaggaatttcagggtgaatggactgcgccagctcctgagttcactgccac 952
                 |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||
Sbjct: 263613552 tgtgaccaaggaggaatttcagggtgaatggactgctccagctcctgagttcattgctac 263613493

                                                                             
Query: 953       tcaacctgaggtggcagattggtccgaaggtgtgcaggtgccttctgtgcccatccagca 1012
                 |||||||||| ||||||||||||||  ||| |||||||||||||||||||||||||| ||
Sbjct: 263613492 tcaacctgagatggcagattggtccagaggcgtgcaggtgccttctgtgcccatccatca 263613433

                                                                             
Query: 1013      attccctactgaagattggagtgctcagcctaccactgaagattggtctgcagctcccac 1072
                  || ||||||||||| ||||||||||||||||||||       |||||||||||||||||
Sbjct: 263613432 gttacctactgaagactggagtgctcagcctaccac-------tggtctgcagctcccac 263613380

                                                                             
Query: 1073      tgcgcaggccactgaatgggtaggaacaaccactgagtggtcttaagttcttccatgaac 1132
                 ||| |||||||||||||| ||||||||| | |||||||| ||||||||||||||||  ||
Sbjct: 263613379 tgctcaggccactgaatgcgtaggaacagctactgagtgatcttaagttcttccatagac 263613320

                      
Query: 1133      tctta 1137
                 |||||
Sbjct: 263613319 tctta 263613315



 Score = 1136 bits (573), Expect = 0.0
 Identities = 856/951 (90%), Gaps = 12/951 (1%)
 Strand = Plus / Minus

                                                                             
Query: 177       gtccatacggcgttgttcttgattcccgtcgtaacttaaagggagactttcacaatgtcc 236
                 ||||||| ||| ||||||||| |||| || || ||||||||||| ||||||||| |||| 
Sbjct: 172599884 gtccatatggctttgttcttggttcctgttgtgacttaaagggaaactttcacattgtct 172599825

                                                                             
Query: 237       ggagccctcgatgtcctgcaaatgaaagaggaggatgtcctcaagttccttgcagcagga 296
                 |||||||| |||||| || |||||||| |||||||||||||| | ||| |||||||||||
Sbjct: 172599824 ggagcccttgatgtcttgtaaatgaaaaaggaggatgtcctctaattctttgcagcagga 172599765

                                                                             
Query: 297       acccaccttggtggcaccaaccttgacttccaaatggaacagtacatctacaaaaggaaa 356
                 ||||||   ||||||||||  |||||||||| ||||||||| ||||||||||||||||||
Sbjct: 172599764 acccactgaggtggcaccaggcttgacttcccaatggaacattacatctacaaaaggaaa 172599705

                                                                             
Query: 357       agtgatggcatctacatcataaatctgaagagaacctgggagaaacttctgttggcggct 416
                 || ||||||||||||||||||||||||||||||||| ||||||||||||||| |  ||||
Sbjct: 172599704 agcgatggcatctacatcataaatctgaagagaacccgggagaaacttctgtggatggct 172599645

                                                                             
Query: 417       cgtgccatcgttgccattgaaaacccagccgatgtcagtgtcatatcctccaggaatact 476
                 |||| | | |||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 172599644 cgtgacgttgttgccattgaaaacccagctgatgtcagtgtcacatcctccaggaatact 172599585

                                                                             
Query: 477       ggccagcgagctgtgctgaagtttgctgctgccactggagccactcctattgctggccgc 536
                 |||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 172599584 ggccagtgagctatactgaagtttgctgctgccactggagccactcctattgctggccac 172599525

                                                                             
Query: 537       ttcactcctggaaccttcactaaccagatccaggcagccttccgggagccaagacttctg 596
                 ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 172599524 ttcactcctggaaacttcactaaccagatccaggcagccttctgggagccaagacttctg 172599465

                                                                             
Query: 597       gtggttactgatcccagggctgaccaccagcctctcacagaggcctcttatgttaacctg 656
                 ||||||||| |||| || ||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 172599464 gtggttacttatccaagagctgaccaccaacctctcacagaggcctcttatattaacctg 172599405

                                                                             
Query: 657       cctaccattgctctgtgtaacacagactcacctctgcgttatgtggacattgccatcccg 716
                 ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |
Sbjct: 172599404 cctaccattgctctgtgtaacacagactcgcctctgcgttatgtggacaatgccatcctg 172599345

                                                                             
Query: 717       tgcaacaacaagggagctcactcagtgggtctgatgtggtggatgctcgcccgggaagtt 776
                 |||||||||||| |||||||||||||||||||||||||||| ||||| |||| ||     
Sbjct: 172599344 tgcaacaacaagagagctcactcagtgggtctgatgtggtgaatgcttgcccagg----- 172599290

                                                                             
Query: 777       ctgcgcatgcgtggcaccatctcccgggaacacccatgggaagtcatgcctgacctctac 836
                       ||| |||||||||||||||| ||||||||||||||||||||||||||  |||||
Sbjct: 172599289 ------atgtgtggcaccatctcccgtgaacacccatgggaagtcatgcctgatttctac 172599236

                                                                             
Query: 837       ttctacagagatcctgaagagattgaaaaggaagagcaggccgcagctgagaaggctgtg 896
                 |||||||||||||||||||||||||||||||| ||| |||| || ||||||| |||||||
Sbjct: 172599235 ttctacagagatcctgaagagattgaaaaggaggaggaggcagcggctgagatggctgtg 172599176

                                                                             
Query: 897       accaaggaggaatttcagggtgaatggactgcgccagctcctgagttcactgccactcaa 956
                 |||||||||||| |||||||||||| || ||| |||| ||||||||||||||| ||||||
Sbjct: 172599175 accaaggaggaacttcagggtgaatagaatgctccaggtcctgagttcactgctactcaa 172599116

                                                                             
Query: 957       cctgaggtggcagattggtccgaaggtgtgcaggtgccttctgtgcccatccagcaattc 1016
                 ||||||||||||||||||||| ||||  ||||||||||||||| | || ||||||| |||
Sbjct: 172599115 cctgaggtggcagattggtccaaaggcatgcaggtgccttctgggtccttccagcagttc 172599056

                                                                             
Query: 1017      cctactgaagattggagtgctcagcctaccactgaagattggtctgcagctcccactgcg 1076
                 ||||||||||| |||||||||||||||  ||| |||||||| |||||||||||||||   
Sbjct: 172599055 cctactgaagactggagtgctcagcct-gcaccgaagattgctctgcagctcccactttt 172598997

                                                                    
Query: 1077      caggccactgaatgggtaggaacaaccactgagtggtcttaagttcttcca 1127
                 |||||||||||||||||||||| |||||||||||||||  |||||||||||
Sbjct: 172598996 caggccactgaatgggtaggaaaaaccactgagtggtccaaagttcttcca 172598946



 Score =  159 bits (80), Expect = 4e-36
 Identities = 184/216 (85%), Gaps = 2/216 (0%)
 Strand = Plus / Minus

                                                                             
Query: 257       aatgaaagaggaggatgtcctcaagttccttgcagcaggaacccaccttggtggcaccaa 316
                 |||||| ||||||||||||||||| |||||| || |||||||||||   ||||| |||||
Sbjct: 150365707 aatgaaggaggaggatgtcctcaaattccttacatcaggaacccactcaggtggtaccaa 150365648

                                                                             
Query: 317       ccttgacttccaaatggaacagtacatctacaaaaggaaaagtgatggcatctacatcat 376
                 |||||| |||||||||||||||| ||||||||||||||||| ||||||| | ||| ||||
Sbjct: 150365647 ccttgatttccaaatggaacagt-catctacaaaaggaaaaatgatggcct-tacctcat 150365590

                                                                             
Query: 377       aaatctgaagagaacctgggagaaacttctgttggcggctcgtgccatcgttgccattga 436
                  | | ||||||||||||||||||| ||||||   || |||| |||||| ||||||||| |
Sbjct: 150365589 tactttgaagagaacctgggagaagcttctgccagctgctcctgccattgttgccattta 150365530

                                                     
Query: 437       aaacccagccgatgtcagtgtcatatcctccaggaa 472
                 |||||  || || ||||| |||  ||||||||||||
Sbjct: 150365529 aaaccttgctgaggtcagggtcccatcctccaggaa 150365494



 Score =  143 bits (72), Expect = 3e-31
 Identities = 150/176 (85%)
 Strand = Plus / Plus

                                                                            
Query: 210      acttaaagggagactttcacaatgtccggagccctcgatgtcctgcaaatgaaagaggag 269
                ||||||||||| |||||  ||||||| |||||||| ||||||||||| || || ||||||
Sbjct: 35664465 acttaaagggaaacttttgcaatgtcaggagcccttgatgtcctgcatataaaggaggag 35664524

                                                                            
Query: 270      gatgtcctcaagttccttgcagcaggaacccaccttggtggcaccaaccttgacttccaa 329
                ||||  || ||  |||||||||||||||||| | |  ||||||||| |||||||||||||
Sbjct: 35664525 gatgctcttaaactccttgcagcaggaacccccttaagtggcaccagccttgacttccaa 35664584

                                                                        
Query: 330      atggaacagtacatctacaaaaggaaaagtgatggcatctacatcataaatctgaa 385
                 | |||||| |||| | ||||||||||| |||||||||||| || |||||||||||
Sbjct: 35664585 gtagaacagaacatttgcaaaaggaaaaatgatggcatctatattataaatctgaa 35664640



 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 210/264 (79%), Gaps = 2/264 (0%)
 Strand = Plus / Plus

                                                                             
Query: 324       ttccaaatggaacagtacatctacaaaaggaaaagtgatggcatctacatcataaatctg 383
                 |||||||||||||| ||||||  | |||||||||||||||||| | | ||| ||| ||| 
Sbjct: 131820792 ttccaaatggaacactacatcagccaaaggaaaagtgatggcaccgatatcttaagtcta 131820851

                                                                             
Query: 384       aagagaacctgggagaaacttctgttggcggctcgtgccatcgttgccattgaaaaccca 443
                 ||||||||||  |||||  ||||  |||| | || ||| || | | ||||| ||||||| 
Sbjct: 131820852 aagagaacctcagagaagattctcctggcagttcctgctattgctaccatttaaaacccc 131820911

                                                                             
Query: 444       gccgatgtcagtgtcatatcctccaggaatactggccagcgagctgtgctgaagtttgct 503
                  | || ||||| | |||||||||||||   | |||||| | | ||||| | |||||||||
Sbjct: 131820912 actgaggtcagggccatatcctccaggtgcagtggcca-ccatctgtgttaaagtttgct 131820970

                                                                             
Query: 504       gctgccactggagccactcctattgctggccgcttcactcctggaaccttcactaaccag 563
                 |||| |||| |||||||| ||  | || || |||||||  ||| ||||||| |||| |||
Sbjct: 131820971 gctgtcactagagccactactcct-cttgcggcttcacatctgcaaccttccctaagcag 131821029

                                         
Query: 564       atccaggcagccttccgggagcca 587
                 ||||| | ||||||||||||||||
Sbjct: 131821030 atccaagtagccttccgggagcca 131821053



 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 210/264 (79%), Gaps = 2/264 (0%)
 Strand = Plus / Minus

                                                                             
Query: 324       ttccaaatggaacagtacatctacaaaaggaaaagtgatggcatctacatcataaatctg 383
                 |||||||||||||| ||||||  | |||||||||||||||||| | | ||| ||| ||| 
Sbjct: 131893995 ttccaaatggaacactacatcagccaaaggaaaagtgatggcaccgatatcttaagtcta 131893936

                                                                             
Query: 384       aagagaacctgggagaaacttctgttggcggctcgtgccatcgttgccattgaaaaccca 443
                 ||||||||||  |||||  ||||  |||| | || ||| || | | ||||| ||||||| 
Sbjct: 131893935 aagagaacctcagagaagattctcctggcagttcctgctattgctaccatttaaaacccc 131893876

                                                                             
Query: 444       gccgatgtcagtgtcatatcctccaggaatactggccagcgagctgtgctgaagtttgct 503
                  | || ||||| | |||||||||||||   | |||||| | | ||||| | |||||||||
Sbjct: 131893875 actgaggtcagggccatatcctccaggtgcagtggcca-ccatctgtgttaaagtttgct 131893817

                                                                             
Query: 504       gctgccactggagccactcctattgctggccgcttcactcctggaaccttcactaaccag 563
                 |||| |||| |||||||| ||  | || || |||||||  ||| ||||||| |||| |||
Sbjct: 131893816 gctgtcactagagccactactcct-cttgcggcttcacatctgcaaccttccctaagcag 131893758

                                         
Query: 564       atccaggcagccttccgggagcca 587
                 ||||| | ||||||||||||||||
Sbjct: 131893757 atccaagtagccttccgggagcca 131893734



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                               
Query: 549       accttcactaaccagatccaggcagccttccgggagccaagacttc 594
                 |||||| ||||||||||||||||| ||||||||||| |||||||||
Sbjct: 150365454 accttccctaaccagatccaggcatccttccgggagtcaagacttc 150365409


>Sscrofa_Chr03 
||          Length = 144787322

 Score =  940 bits (474), Expect = 0.0
 Identities = 735/817 (89%), Gaps = 10/817 (1%)
 Strand = Plus / Plus

                                                                            
Query: 166      cccagaccggggtccatacggcgttgttcttgattcccgtcgtaacttaaagggagactt 225
                ||||||| ||||||||||| ||||||| ||||||||||   |||||||||||||| ||| 
Sbjct: 38173001 cccagacaggggtccatacagcgttgtccttgattcccactgtaacttaaagggaaactg 38173060

                                                                            
Query: 226      tcacaatgtccggagccctcgatgtcctgcaaatgaaagaggaggatgtcctcaagttcc 285
                ||||||||||| |||||||| | ||||||||||||||||||||||| |||||||| ||| 
Sbjct: 38173061 tcacaatgtccagagccctcaaagtcctgcaaatgaaagaggaggaggtcctcaaattct 38173120

                                                                            
Query: 286      ttgcagcaggaacccaccttggtggcaccaaccttgacttccaaatggaacagtacatct 345
                ||||||||||||||||||| |||| ||||    |||||||||||||||||||||||||||
Sbjct: 38173121 ttgcagcaggaacccacctaggtgacacc----ttgacttccaaatggaacagtacatct 38173176

                                                                            
Query: 346      acaaaaggaaaagtgatggcatctacatcataaatctgaagagaacctgggagaaacttc 405
                ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 38173177 acaaaaggaaaagtgatggcatctacagcataaatctgaagagaacctgggagaagcttc 38173236

                                                                            
Query: 406      tgttggcggctcgtgccatcgttgccattgaaaacccagccgatgtcagtgtcatatcct 465
                 |||||| |||| |||||| ||||||||||| |||||||| |||||||||||||||||||
Sbjct: 38173237 ggttggcagctcctgccattgttgccattgagaacccagctgatgtcagtgtcatatcct 38173296

                                                                            
Query: 466      ccaggaatactggccagcgagctgtgctgaagtttgctgctgccactggagccactccta 525
                ||||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||||
Sbjct: 38173297 ccaggaatactggccagcgagctgtgctgaagtttgctgctgccactagcgtcacgccta 38173356

                                                                            
Query: 526      ttgctggccgcttcactcctggaaccttcactaaccagatccaggcagccttccgggagc 585
                 |||||||| ||||||||||||||||||||||||||||| || ||||||||| | |||||
Sbjct: 38173357 gtgctggcctcttcactcctggaaccttcactaaccaga-cccggcagcctt-ctggagc 38173414

                                                                            
Query: 586      caagacttctggtggttactgatcccagggctgaccaccagcctctcacagaggcctctt 645
                |||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||
Sbjct: 38173415 caagacttctggtggttactgaccccagggctgaccaccagcatctcacaga-gcctctt 38173473

                                                                            
Query: 646      atgttaacctgcctaccattgctctgtgtaacacagactcacctctgcgttatgtggaca 705
                   ||||||||||||||||||||||||| ||| ||||||| ||||| | ||| |||||||
Sbjct: 38173474 tcattaacctgcctaccattgctctgtgcaacgcagactctcctctacattacgtggaca 38173533

                                                                            
Query: 706      ttgccatcccgtgcaacaacaagggagctcactcagtgggtctgatgtggtggatgctcg 765
                ||||||  || ||   ||  ||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 38173534 ttgccagtccatg---cagtaagggagctcactcagtgggtctgatggggtggatgctca 38173590

                                                                            
Query: 766      cccgggaagttctgcgcatgcgtggcaccatctcccgggaacacccatgggaagtcatgc 825
                ||  ||||| |||||   ||| |||||||||||| |  |||||||||||||| |||||||
Sbjct: 38173591 cctaggaagatctgcatgtgcctggcaccatctctcatgaacacccatgggaggtcatgc 38173650

                                                                            
Query: 826      ctgacctctacttctacagagatcctgaagagattgaaaaggaagagcaggccgcagctg 885
                |||| |||| ||||||||||||||||||||||| |||||||||||||||||| ||||| |
Sbjct: 38173651 ctgatctctgcttctacagagatcctgaagagactgaaaaggaagagcaggcagcagccg 38173710

                                                                            
Query: 886      agaaggctgtgaccaaggaggaatttcagggtgaatggactgcgccagctcctgagttca 945
                |||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||
Sbjct: 38173711 agaaggctgtgaccaaggaggaatttcagggtgaatggtctgctccacctcctgagttca 38173770

                                                     
Query: 946      ctgccactcaacctgaggtggcagattggtccgaagg 982
                |||| |||||||||||||||||||| |||||| ||||
Sbjct: 38173771 ctgctactcaacctgaggtggcagactggtccaaagg 38173807



 Score =  932 bits (470), Expect = 0.0
 Identities = 767/864 (88%), Gaps = 19/864 (2%)
 Strand = Plus / Minus

                                                                             
Query: 154       ctttccgcgctgcccagaccggggtccatacggcgttgttcttgattcccgtcgtaactt 213
                 ||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||
Sbjct: 139808191 ctttccgcgctgcccagactggggtccacacggcgttgttcttgattcccgtggtaactt 139808132

                                                                             
Query: 214       aaa-gggagactttcacaatgtccggagccctcgatgtcctgcaaatgaaagaggaggat 272
                 ||| |||| |||||| ||||||| | |||||||||||||| |||||     | |||||||
Sbjct: 139808131 aaaagggaaactttcgcaatgtctgcagccctcgatgtccagcaaa-----gcggaggat 139808077

                                                                             
Query: 273       gtcctcaagttccttgcagcaggaacccaccttggtggcaccaaccttgacttccaaatg 332
                 |||  || |||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 139808076 gtctgcaggttccttgcagcaggaacccaccttgctggcaccaaccttgacttccacatg 139808017

                                                                             
Query: 333       gaacagtacatctacaaaaggaaaagtgatggcatctacatcataaatctgaagagaacc 392
                 ||||||||| || |||||||||||||||||||||| ||||||| ||||| ||||||||||
Sbjct: 139808016 gaacagtacctccacaaaaggaaaagtgatggcatttacatcagaaatcggaagagaacc 139807957

                                                                             
Query: 393       tgggagaaacttctgttggcggctcgtgccatcgttgccattgaaaacccagccgatgtc 452
                 |||||||| ||||||||||| |||| |||||| |||||||| | | ||||||| || |||
Sbjct: 139807956 tgggagaagcttctgttggcagctcttgccattgttgccatggcagacccagctgaggtc 139807897

                                                                             
Query: 453       agtgtcatatcctccaggaatactggccagcgagctgtgctgaagtttgctgctgccact 512
                 |||||||  ||||| |||||||  |||||| | |||||||||||||||||||||||||||
Sbjct: 139807896 agtgtcacctcctctaggaatatcggccagtgggctgtgctgaagtttgctgctgccact 139807837

                                                                             
Query: 513       ggagccactcctattgctggccgcttcactcctggaaccttcactaaccagatccaggca 572
                 |||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 139807836 ggagcccctcctattgctggctgcttcactcctggaaccttccctaaccagatccaggca 139807777

                                                                             
Query: 573       gccttccgggagccaagacttctggtggttactgatcccagggctga-ccaccagcctct 631
                 |||||| |||||||||||||||||||||| || |||||||||||||| || || ||||||
Sbjct: 139807776 gccttctgggagccaagacttctggtggtgaccgatcccagggctgacccccccgcctct 139807717

                                                                             
Query: 632       cacagaggcctcttatgttaacctgcctaccattgctctgtgtaacacagactcacctct 691
                 |||||||||||| | ||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 139807716 cacagaggcctcctgtgttaacctgcgtaccattgctctgtgtaacacagactcgcctct 139807657

                                                                             
Query: 692       gcgttatgtggacattgccatcccgtgcaacaacaagggagctcactcagtgggtctgat 751
                 ||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| |||
Sbjct: 139807656 gcgttatgtggacatcgccatcccgagcaaccacaagggagctcactcagtgggtccgat 139807597

                                                                             
Query: 752       gtggtggatgctcgcccgggaagttctgcgcatgcgtggcaccatctcccgggaacaccc 811
                 ||||| |||||||||| ||||||||||||||||||||||| ||||| |||| |||| |||
Sbjct: 139807596 gtggtagatgctcgcctgggaagttctgcgcatgcgtggcgccatcacccgtgaaccccc 139807537

                                                                             
Query: 812       atgggaagtca---tgcctgacctctacttctacagagatcctgaagagattgaaaagga 868
                  ||||||| ||    ||||||||||| || ||||||||| ||||||||||||||| ||||
Sbjct: 139807536 gtgggaagccaggtggcctgacctctcctgctacagagaccctgaagagattgaagagga 139807477

                                                                             
Query: 869       agagcaggccgcagctgagaaggctgtgaccaaggaggaatttcagggtgaatggactgc 928
                 ||||||||| |  || ||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 139807476 agagcaggcagtggcggagaaggctgtgaccaaggaggaatttcagggtgaatggactgt 139807417

                                                                             
Query: 929       gccagctcctgagttcactgccactcaacctgaggtggcagattggtccgaaggtgtgca 988
                 |||||||| |  |||| |||| |||||||||         ||| |||| ||||| |||||
Sbjct: 139807416 gccagctcttcggttccctgctactcaacct---------gatgggtctgaaggcgtgca 139807366

                                         
Query: 989       ggtgccttctgtgcccatccagca 1012
                 |||||| |||||||||||||||||
Sbjct: 139807365 ggtgccctctgtgcccatccagca 139807342



 Score =  129 bits (65), Expect = 4e-27
 Identities = 77/81 (95%)
 Strand = Plus / Minus

                                                                             
Query: 1057      ggtctgcagctcccactgcgcaggccactgaatgggtaggaacaaccactgagtggtctt 1116
                 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| 
Sbjct: 139807324 ggtctgcagctcccactgctcaggccactgaatgggtaggaacaaccactgagtggtctg 139807265

                                      
Query: 1117      aagttcttccatgaactctta 1137
                 |||||||||||  ||||||||
Sbjct: 139807264 aagttcttccacaaactctta 139807244



 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                            
Query: 1047     actgaagattggtctgcagctcccactgcgcaggccactgaatgggtaggaacaaccact 1106
                |||||||| |||||||||||| ||||||| ||||| |||||||||||||||| || ||||
Sbjct: 38173850 actgaagactggtctgcagctgccactgctcaggctactgaatgggtaggaataatcact 38173909

                            
Query: 1107     gagtggtcttaa 1118
                ||| ||||||||
Sbjct: 38173910 gaggggtcttaa 38173921


>Sscrofa_Chr12 
||          Length = 63588571

 Score =  932 bits (470), Expect = 0.0
 Identities = 767/864 (88%), Gaps = 19/864 (2%)
 Strand = Plus / Minus

                                                                            
Query: 154      ctttccgcgctgcccagaccggggtccatacggcgttgttcttgattcccgtcgtaactt 213
                ||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||
Sbjct: 54882901 ctttccgcgctgcccagactggggtccacacggcgttgttcttgattcccgtggtaactt 54882842

                                                                            
Query: 214      aaa-gggagactttcacaatgtccggagccctcgatgtcctgcaaatgaaagaggaggat 272
                ||| |||| |||||| ||||||| | |||||||||||||| |||||     | |||||||
Sbjct: 54882841 aaaagggaaactttcgcaatgtctgcagccctcgatgtccagcaaa-----gcggaggat 54882787

                                                                            
Query: 273      gtcctcaagttccttgcagcaggaacccaccttggtggcaccaaccttgacttccaaatg 332
                |||  || |||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 54882786 gtctgcaggttccttgcagcaggaacccaccttgctggcaccaaccttgacttccacatg 54882727

                                                                            
Query: 333      gaacagtacatctacaaaaggaaaagtgatggcatctacatcataaatctgaagagaacc 392
                ||||||||| || |||||||||||||||||||||| ||||||| ||||| ||||||||||
Sbjct: 54882726 gaacagtacctccacaaaaggaaaagtgatggcatttacatcagaaatcggaagagaacc 54882667

                                                                            
Query: 393      tgggagaaacttctgttggcggctcgtgccatcgttgccattgaaaacccagccgatgtc 452
                |||||||| ||||||||||| |||| |||||| |||||||| | | ||||||| || |||
Sbjct: 54882666 tgggagaagcttctgttggcagctcttgccattgttgccatggcagacccagctgaggtc 54882607

                                                                            
Query: 453      agtgtcatatcctccaggaatactggccagcgagctgtgctgaagtttgctgctgccact 512
                |||||||  ||||| |||||||  |||||| | |||||||||||||||||||||||||||
Sbjct: 54882606 agtgtcacctcctctaggaatatcggccagtgggctgtgctgaagtttgctgctgccact 54882547

                                                                            
Query: 513      ggagccactcctattgctggccgcttcactcctggaaccttcactaaccagatccaggca 572
                |||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 54882546 ggagcccctcctattgctggctgcttcactcctggaaccttccctaaccagatccaggca 54882487

                                                                            
Query: 573      gccttccgggagccaagacttctggtggttactgatcccagggctga-ccaccagcctct 631
                |||||| |||||||||||||||||||||| || |||||||||||||| || || ||||||
Sbjct: 54882486 gccttctgggagccaagacttctggtggtgaccgatcccagggctgacccccccgcctct 54882427

                                                                            
Query: 632      cacagaggcctcttatgttaacctgcctaccattgctctgtgtaacacagactcacctct 691
                |||||||||||| | ||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 54882426 cacagaggcctcctgtgttaacctgcgtaccattgctctgtgtaacacagactcgcctct 54882367

                                                                            
Query: 692      gcgttatgtggacattgccatcccgtgcaacaacaagggagctcactcagtgggtctgat 751
                ||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| |||
Sbjct: 54882366 gcgttatgtggacatcgccatcccgagcaaccacaagggagctcactcagtgggtccgat 54882307

                                                                            
Query: 752      gtggtggatgctcgcccgggaagttctgcgcatgcgtggcaccatctcccgggaacaccc 811
                ||||| |||||||||| ||||||||||||||||||||||| ||||| |||| |||| |||
Sbjct: 54882306 gtggtagatgctcgcctgggaagttctgcgcatgcgtggcgccatcacccgtgaaccccc 54882247

                                                                            
Query: 812      atgggaagtca---tgcctgacctctacttctacagagatcctgaagagattgaaaagga 868
                 ||||||| ||    ||||||||||| || ||||||||| ||||||||||||||| ||||
Sbjct: 54882246 gtgggaagccaggtggcctgacctctcctgctacagagaccctgaagagattgaagagga 54882187

                                                                            
Query: 869      agagcaggccgcagctgagaaggctgtgaccaaggaggaatttcagggtgaatggactgc 928
                ||||||||| |  || ||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 54882186 agagcaggcagtggcggagaaggctgtgaccaaggaggaatttcagggtgaatggactgt 54882127

                                                                            
Query: 929      gccagctcctgagttcactgccactcaacctgaggtggcagattggtccgaaggtgtgca 988
                |||||||| |  |||| |||| |||||||||         ||| |||| ||||| |||||
Sbjct: 54882126 gccagctcttcggttccctgctactcaacct---------gatgggtctgaaggcgtgca 54882076

                                        
Query: 989      ggtgccttctgtgcccatccagca 1012
                |||||| |||||||||||||||||
Sbjct: 54882075 ggtgccctctgtgcccatccagca 54882052



 Score =  129 bits (65), Expect = 4e-27
 Identities = 77/81 (95%)
 Strand = Plus / Minus

                                                                            
Query: 1057     ggtctgcagctcccactgcgcaggccactgaatgggtaggaacaaccactgagtggtctt 1116
                ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| 
Sbjct: 54882034 ggtctgcagctcccactgctcaggccactgaatgggtaggaacaaccactgagtggtctg 54881975

                                     
Query: 1117     aagttcttccatgaactctta 1137
                |||||||||||  ||||||||
Sbjct: 54881974 aagttcttccacaaactctta 54881954


>gb|GL894387.2| Sus scrofa unplaced genomic scaffold ChrUScaf2271
          Length = 78668

 Score =  844 bits (426), Expect = 0.0
 Identities = 626/686 (91%), Gaps = 5/686 (0%)
 Strand = Plus / Plus

                                                                        
Query: 174  ggggtccatacggcgttgttcttgattcccgtcgtaacttaaagggagactttcacaatg 233
            ||||||||||| |||||||||||||||||| || | ||||||||||| ||||| ||||||
Sbjct: 7529 ggggtccatacagcgttgttcttgattcccatcatgacttaaagggaaactttgacaatg 7588

                                                                        
Query: 234  tccggagccctcgatgtcctgcaaatgaaagaggaggatgtcctcaagttccttgcagca 293
            || |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 7589 tctggagcccttgatgtcctgcaaatgaaagaggaggatgtcctcaaattccttgcagca 7648

                                                                        
Query: 294  ggaacccaccttggtggcaccaaccttgacttccaaatggaacagtacatctacaaaagg 353
             |||||||||| |||| ||||||||||||||||||||||| |||||  || || | ||||
Sbjct: 7649 agaacccacctaggtgtcaccaaccttgacttccaaatggcacagtctatgtaaagaagg 7708

                                                                        
Query: 354  aaaagtgatggcatctacatcataaatctgaagagaacctgggagaaacttctgttggcg 413
            ||||| ||| ||||||| ||||| ||||||||||||||||||||| |||||||||||| |
Sbjct: 7709 aaaagggatagcatctatatcat-aatctgaagagaacctgggag-aacttctgttggtg 7766

                                                                        
Query: 414  gctcgtgccatcgttgccattgaaaacccagccgatgtcagtgtcatatcctccaggaat 473
            ||||||||||| ||||||| |||| | ||||| |||||||||||||||||||||||||||
Sbjct: 7767 gctcgtgccattgttgccactgaagatccagctgatgtcagtgtcatatcctccaggaat 7826

                                                                        
Query: 474  actggccagcgagctgtgctgaagtttgctgctgccact-ggagccactcctattgctgg 532
            |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 7827 actggccatcgagctgtgctgaagtttgctgctgccactgggagccactcctattgctgg 7886

                                                                        
Query: 533  ccgcttcactcctggaaccttcactaaccagatccaggcagccttccgggagccaagact 592
            ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 7887 ccgcttcactcctggaaacttcactaaccagatccaggcagccttctgggagccaaga-t 7945

                                                                        
Query: 593  tctggtggttactgatcccagggctgaccaccagcctctcacagaggcctcttatgttaa 652
            ||||||||| ||||||||||||||||||||||||| ||||||||| | ||||||||||||
Sbjct: 7946 tctggtggtgactgatcccagggctgaccaccagcatctcacagaagtctcttatgttaa 8005

                                                                        
Query: 653  cctgcctaccattgctctgtgtaacacagactcacctctgcgttatgtggacattgccat 712
            |||||||||||||||||||||||||| |||||| ||||||| ||||| |||||| |||||
Sbjct: 8006 cctgcctaccattgctctgtgtaacaaagactctcctctgcattatgcggacatagccat 8065

                                                                        
Query: 713  cccgtgcaacaacaagggagctcactcagtgggtctgatgtggtggatgctcgcccggga 772
            ||| || |||||| ||| |||||||||||| |||||||| ||| ||||||| ||||||||
Sbjct: 8066 cccatgaaacaacgaggaagctcactcagt-ggtctgatctggcggatgcttgcccggga 8124

                                                                        
Query: 773  agttctgcgcatgcgtggcaccatctcccgggaacacccatgggaagtcatgcctgacct 832
            |||||||||||||| |||||||||||| || |||||||  ||||||||||||||| |  |
Sbjct: 8125 agttctgcgcatgcctggcaccatctctcgtgaacaccagtgggaagtcatgcctcattt 8184

                                      
Query: 833  ctacttctacagagatcctgaagaga 858
             |||||||||||||||||||||||||
Sbjct: 8185 ttacttctacagagatcctgaagaga 8210



 Score =  200 bits (101), Expect = 1e-48
 Identities = 165/187 (88%), Gaps = 7/187 (3%)
 Strand = Plus / Plus

                                                                        
Query: 951  actcaacctgaggtggcagattggtccgaaggtgtgcaggtgccttctgtgcccatccag 1010
            |||||||||||| ||||||||||||||  ||| |||||||||||||||||||||||||| 
Sbjct: 8316 actcaacctgagatggcagattggtccagaggcgtgcaggtgccttctgtgcccatccat 8375

                                                                        
Query: 1011 caattccctactgaagattggagtgctcagcctaccactgaagattggtctgcagctccc 1070
            || || ||||||||||| ||||||||||||||||||||       |||||||||||||||
Sbjct: 8376 cagttacctactgaagactggagtgctcagcctaccac-------tggtctgcagctccc 8428

                                                                        
Query: 1071 actgcgcaggccactgaatgggtaggaacaaccactgagtggtcttaagttcttccatga 1130
            ||||| |||||||||||||| ||||||||| | |||||||| ||||||||||||||||  
Sbjct: 8429 actgctcaggccactgaatgcgtaggaacagctactgagtgatcttaagttcttccatag 8488

                   
Query: 1131 actctta 1137
            |||||||
Sbjct: 8489 actctta 8495


>Sscrofa_Chr14 
||          Length = 153851969

 Score =  829 bits (418), Expect = 0.0
 Identities = 797/924 (86%), Gaps = 17/924 (1%)
 Strand = Plus / Minus

                                                                             
Query: 176       ggtccatacggcgttgttcttgattcccgtcgtaacttaaagggagactttcacaatgtc 235
                 ||||||||| | |||||||| |||||||   ||||||||||| || ||||||||||||||
Sbjct: 101040270 ggtccatacagtgttgttctggattcccactgtaacttaaagagaaactttcacaatgtc 101040211

                                                                             
Query: 236       cggagccctcgatgtcctgcaaatgaaagaggaggatgtcctcaagttccttgcagcagg 295
                 ||||    | || ||||||||||||||  |||||||||||||||| ||||||||||||||
Sbjct: 101040210 cggatgttt-gaggtcctgcaaatgaagtaggaggatgtcctcaaattccttgcagcagg 101040152

                                                                             
Query: 296       aacccaccttggtggcaccaaccttgacttccaaatggaacagtacatctacaaaaggaa 355
                 ||||||| | |||||||||||||| ||||||||||||||||| |||| ||||||||||||
Sbjct: 101040151 aacccacttaggtggcaccaacctagacttccaaatggaacaatacagctacaaaaggaa 101040092

                                                                             
Query: 356       aagtgatggcatctacatcataaatctgaagagaacctgggagaaacttctgttggcggc 415
                 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | 
Sbjct: 101040091 aagtgatggcatctacatcataaatctgaagagaacctgggagaaccttctgttggcagt 101040032

                                                                             
Query: 416       tcgtgccatcgttgccattgaaaacccagccgatgtcagtgtcatatcctccaggaatac 475
                 ||||||||| |||| ||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct: 101040031 tcgtgccattgttgtcattgaaaacccagctgatgtcagtgtcatatcttcaaggaatac 101039972

                                                                             
Query: 476       tggccagcgagctgtgctgaagtttgctgctgccactggagccactcctattgctggccg 535
                 | |||| | ||||||||||||||||||| |||||||| |||||||| |||||||||||| 
Sbjct: 101039971 tagccaccaagctgtgctgaagtttgctactgccactagagccacttctattgctggcca 101039912

                                                                             
Query: 536       cttcactcctggaaccttcactaaccagatccaggcagccttccgggagccaagacttct 595
                  |||||||| |||| ||||||||||||||||| || ||| ||| ||||||||||||||||
Sbjct: 101039911 tttcactcccggaaacttcactaaccagatccgggtagcattctgggagccaagacttct 101039852

                                                                             
Query: 596       ggtggttactgatcccagggctgaccaccagcctctcacagaggcctcttatgttaacct 655
                 |||| ||||||||| |||||||||  |||||||||||||||||||||||||| |||||||
Sbjct: 101039851 ggtgtttactgatctcagggctgattaccagcctctcacagaggcctcttatattaacct 101039792

                                                                             
Query: 656       gcctaccattgctctgtgtaacacagactcacctctgcgttatgtggacattgccatccc 715
                  ||  | | |||||||||||| |||||||| ||||||  |||||||||||||||||||  
Sbjct: 101039791 acccccaactgctctgtgtaatacagactctcctctgtattatgtggacattgccatcta 101039732

                                                                             
Query: 716       gtgcaacaacaagggagctcactcagtgggtctgatgtggtggatgctcgcccgggaagt 775
                  ||||||||||||||| |||||||||||||||||||||||||| |||| |||| ||||| 
Sbjct: 101039731 atgcaacaacaagggaactcactcagtgggtctgatgtggtgggtgctggcccaggaaga 101039672

                                                                             
Query: 776       tctgcgcatgcgtggcaccatctcccgggaacacccatgggaagtcatgcctgacctcta 835
                 ||||| | ||| |||||||||||||   ||||| |||  ||| ||||||||||| |||||
Sbjct: 101039671 tctgcacttgcatggcaccatctcctatgaaca-ccacaggaggtcatgcctgatctcta 101039613

                                                                             
Query: 836       cttctacagagatcctgaagagattgaaaaggaagagcaggccgcagctgagaaggctgt 895
                 || || |||| ||||| |||||| ||||||||||||||| || |||||||          
Sbjct: 101039612 ctgctgcagatatcctaaagagactgaaaaggaagagcatgcagcagctg---------- 101039563

                                                                             
Query: 896       gaccaaggaggaatttcagggtgaatggactgcgccagctcctgagttcactgccactca 955
                      |||||||| |||||||| || ||||| | ||| ||| |||||||||  | |||||
Sbjct: 101039562 -----aggaggaacttcagggtaaacggactactccatctcatgagttcaccactactca 101039508

                                                                             
Query: 956       acctgaggtggcagattggtccgaaggtgtgcaggtgccttctgtgcccatccagcaatt 1015
                 |||| | |  ||||| |||||| ||||  |||| ||||| ||||||||||||||||| ||
Sbjct: 101039507 acctaaagcagcagactggtccaaaggcatgcaagtgccctctgtgcccatccagcagtt 101039448

                                                                             
Query: 1016      ccctactgaagattggagtgctcagcctaccactgaagattggtctgcagctcccactgc 1075
                 |||||||||||| ||||||||||||||| |||||||| | | ||||| ||||||||||||
Sbjct: 101039447 ccctactgaagactggagtgctcagcctgccactgaaaactagtctgtagctcccactgc 101039388

                                         
Query: 1076      gcaggccactgaatgggtaggaac 1099
                  |||||||||||||||||||||||
Sbjct: 101039387 tcaggccactgaatgggtaggaac 101039364



 Score =  739 bits (373), Expect = 0.0
 Identities = 654/746 (87%), Gaps = 15/746 (2%)
 Strand = Plus / Plus

                                                                            
Query: 376      taaatctgaagagaacctgggagaaacttctgttggcggctcgtgccatcgttgccattg 435
                ||||||| | |||||||||||||||||||| ||    |||||||||||| ||||||||||
Sbjct: 77017853 taaatctaaggagaacctgggagaaacttcggt----ggctcgtgccattgttgccattg 77017908

                                                                            
Query: 436      aaaacccagccgatgtcagtgtcatatcctccaggaatactggccagcgagctgtgctga 495
                |||||||||  | ||||| ||||||||||||||||||||||| | ||| |||||||||||
Sbjct: 77017909 aaaacccagttgttgtcaatgtcatatcctccaggaatactgactagcaagctgtgctga 77017968

                                                                            
Query: 496      agtttgctgctgccactggagccactcctattgctggccgcttcactcctggaaccttca 555
                ||||||||||||||||||||||   |||| | ||||||| |||||||||||||||| |||
Sbjct: 77017969 agtttgctgctgccactggagctgttcctgtcgctggccacttcactcctggaaccatca 77018028

                                                                            
Query: 556      ctaaccagatccaggcagccttccgggagccaagacttctggtggttactgatcccaggg 615
                ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 77018029 ctaaccagatccaggcagccttctgggatccaagacttctggtggttactgatcccaggg 77018088

                                                                            
Query: 616      ctgaccaccagcctctcacagaggcctcttatgttaacctgcctaccattgctctgtgta 675
                 ||||| || |||||||||||||    |||| |||||||||||| ||||| |||||||||
Sbjct: 77018089 gtgaccgccggcctctcacagagaga-cttacgttaacctgccttccattcctctgtgta 77018147

                                                                            
Query: 676      acacagactcacctctgcgttatgtggacattgccatcccgtgcaacaacaagggagctc 735
                |||||||||       || ||||||| ||| |  |||||| ||||||||||| |||||||
Sbjct: 77018148 acacagact-------gcattatgtgaacactttcatcccctgcaacaacaaaggagctc 77018200

                                                                            
Query: 736      actcagtgggtctgatgtggtggatgctcgcccgggaagttctgcgcatgcgtggcacca 795
                |||||||||||||||||||||||||||| |||| ||||||| ||| ||| | ||||||||
Sbjct: 77018201 actcagtgggtctgatgtggtggatgctagcccaggaagttgtgcacattcatggcacca 77018260

                                                                            
Query: 796      tctcccgggaacacccatgggaagtcatgcctgacctctacttctacagagatcctgaag 855
                 |||||   ||||| ||  ||| || |||||| | ||||   ||| ||||||||| ||||
Sbjct: 77018261 cctcccataaacactcacaggaggttatgcctcatctct---tctccagagatccagaag 77018317

                                                                            
Query: 856      agattgaaaaggaagagcaggccgcagctgagaaggctgtgaccaaggaggaatttcagg 915
                |||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 77018318 agattgaaaagggagagcaggcagcagctgagaagactgtgaccaaggaggaatttcagg 77018377

                                                                            
Query: 916      gtgaatggactgcgccagctcctgagttcactgccactcaacctgaggtggcagattggt 975
                |||||  |||||| |||||||||| ||||||||  |||||||||||||||||||| ||||
Sbjct: 77018378 gtgaactgactgctccagctcctgtgttcactggtactcaacctgaggtggcagactggt 77018437

                                                                            
Query: 976      ccgaaggtgtgcaggtgccttctgtgcccatccagcaattccctactgaagattggagtg 1035
                | |||||  ||||| |||| ||||||||||||||||| |||||||||||||| |||||||
Sbjct: 77018438 ctgaaggcatgcagttgccctctgtgcccatccagcagttccctactgaagactggagtg 77018497

                                                                            
Query: 1036     ctcagcctaccactgaagattggtctgcagctcccactgcgcaggccactgaatgggtag 1095
                |||||||  |||||||||| |||||||||||||||| ||| |||||||||||||||||||
Sbjct: 77018498 ctcagcccgccactgaagactggtctgcagctcccattgctcaggccactgaatgggtag 77018557

                                          
Query: 1096     gaacaaccactgagtggtcttaagtt 1121
                ||||||||||||||||||||||||||
Sbjct: 77018558 gaacaaccactgagtggtcttaagtt 77018583



 Score =  335 bits (169), Expect = 3e-89
 Identities = 220/237 (92%)
 Strand = Plus / Plus

                                                                            
Query: 153      cctttccgcgctgcccagaccggggtccatacggcgttgttcttgattcccgtcgtaact 212
                ||||||| |||||||||||  |||||||||| ||| ||||| ||||||||| | ||||||
Sbjct: 77017365 cctttccacgctgcccagaaaggggtccatatggcattgtttttgattcccattgtaact 77017424

                                                                            
Query: 213      taaagggagactttcacaatgtccggagccctcgatgtcctgcaaatgaaagaggaggat 272
                |||||||| |||||||||||||| |||||||| ||||||||||||| |||||||||| ||
Sbjct: 77017425 taaagggaaactttcacaatgtctggagcccttgatgtcctgcaaaggaaagaggagaat 77017484

                                                                            
Query: 273      gtcctcaagttccttgcagcaggaacccaccttggtggcaccaaccttgacttccaaatg 332
                |||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 77017485 gtcctcaaattccttgcagcaggaacccacctaggtggtaccaaccttgacttccaaatg 77017544

                                                                         
Query: 333      gaacagtacatctacaaaaggaaaagtgatggcatctacatcataaatctgaagaga 389
                ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77017545 gaatagtacatctacaaaaggaaaagtgatggcatctacatcataaatctgaagaga 77017601


>Sscrofa_Chr09 
||          Length = 153670197

 Score =  829 bits (418), Expect = 0.0
 Identities = 802/930 (86%)
 Strand = Plus / Minus

                                                                            
Query: 192      ttcttgattcccgtcgtaacttaaagggagactttcacaatgtccggagccctcgatgtc 251
                |||| ||||||| || | ||||||||||| | ||||||||| || |||| | | ||||||
Sbjct: 39274007 ttctggattcccatctttacttaaagggaaattttcacaatctctggaggcattgatgtc 39273948

                                                                            
Query: 252      ctgcaaatgaaagaggaggatgtcctcaagttccttgcagcaggaacccaccttggtggc 311
                || |||||||| ||||||||||||||||||  | ||||||||||||||||| | |||| |
Sbjct: 39273947 ctacaaatgaaggaggaggatgtcctcaagaactttgcagcaggaacccacttaggtgac 39273888

                                                                            
Query: 312      accaaccttgacttccaaatggaacagtacatctacaaaaggaaaagtgatggcatctac 371
                |||||||| || ||||||||||||||||||||||||| ||||||||||| |||||||| |
Sbjct: 39273887 accaacctggatttccaaatggaacagtacatctacagaaggaaaagtggtggcatctgc 39273828

                                                                            
Query: 372      atcataaatctgaagagaacctgggagaaacttctgttggcggctcgtgccatcgttgcc 431
                ||||||||||||||||||| ||||||||  ||||| ||||| ||| ||||||| | ||| 
Sbjct: 39273827 atcataaatctgaagagaatctgggagaggcttcttttggcagcttgtgccattgctgct 39273768

                                                                            
Query: 432      attgaaaacccagccgatgtcagtgtcatatcctccaggaatactggccagcgagctgtg 491
                |||||||||||||| ||||||| ||||| |||||   |||||||| |||   ||||||||
Sbjct: 39273767 attgaaaacccagctgatgtcattgtcacatcctttgggaatacttgcccatgagctgtg 39273708

                                                                            
Query: 492      ctgaagtttgctgctgccactggagccactcctattgctggccgcttcactcctggaacc 551
                ||| || || |||||||||| |||||||||||||||| | |  ||||||||| ||||| |
Sbjct: 39273707 ctggagctttctgctgccacaggagccactcctattgattgttgcttcactcttggaaac 39273648

                                                                            
Query: 552      ttcactaaccagatccaggcagccttccgggagccaagacttctggtggttactgatccc 611
                ||||||||||||||||||||||  ||| |||||||||||||||||||||||| |||||||
Sbjct: 39273647 ttcactaaccagatccaggcagttttctgggagccaagacttctggtggttattgatccc 39273588

                                                                            
Query: 612      agggctgaccaccagcctctcacagaggcctcttatgttaacctgcctaccattgctctg 671
                ||||||||| ||||||||||| ||||||||||||||||| |||| |||| ||||||||| 
Sbjct: 39273587 agggctgactaccagcctctcccagaggcctcttatgttcacctacctaacattgctcta 39273528

                                                                            
Query: 672      tgtaacacagactcacctctgcgttatgtggacattgccatcccgtgcaacaacaaggga 731
                 ||||||||||||   |||||| ||||||||||||  |||||| ||||||||||||||||
Sbjct: 39273527 cgtaacacagactgttctctgcattatgtggacatcaccatcctgtgcaacaacaaggga 39273468

                                                                            
Query: 732      gctcactcagtgggtctgatgtggtggatgctcgcccgggaagttctgcgcatgcgtggc 791
                ||||||| ||||||||||||||||  | ||||| || ||||||||||| ||||| |||||
Sbjct: 39273467 gctcacttagtgggtctgatgtggcagctgctcacctgggaagttctgtgcatgtgtggc 39273408

                                                                            
Query: 792      accatctcccgggaacacccatgggaagtcatgcctgacctctacttctacagagatcct 851
                ||||||||| | |||||| ||||||| |||||||||||||| ||||||| |||| |||||
Sbjct: 39273407 accatctccagtgaacactcatgggaggtcatgcctgacctttacttctgcagaaatcct 39273348

                                                                            
Query: 852      gaagagattgaaaaggaagagcaggccgcagctgagaaggctgtgaccaaggaggaattt 911
                || ||||||||||| |||||||| || ||||||| ||||||||  |||||||||||||||
Sbjct: 39273347 gaggagattgaaaaagaagagcaagcagcagctgggaaggctgcaaccaaggaggaattt 39273288

                                                                            
Query: 912      cagggtgaatggactgcgccagctcctgagttcactgccactcaacctgaggtggcagat 971
                ||||||||||||||||  |||||||||||||||||||| || |||| ||| || ||||| 
Sbjct: 39273287 cagggtgaatggactggtccagctcctgagttcactgctacgcaacatgatgttgcagac 39273228

                                                                            
Query: 972      tggtccgaaggtgtgcaggtgccttctgtgcccatccagcaattccctactgaagattgg 1031
                || ||| ||||   ||||||||| ||| ||||||||||||| |||| ||| ||||  | |
Sbjct: 39273227 tgttccaaaggcacgcaggtgccctctttgcccatccagcagttccttaccgaagcctag 39273168

                                                                            
Query: 1032     agtgctcagcctaccactgaagattggtctgcagctcccactgcgcaggccactgaatgg 1091
                |||||||||||| ||||||||   |||||   |||   | |||| |||||||| ||||||
Sbjct: 39273167 agtgctcagcctgccactgaaatctggtccatagcggtccctgctcaggccaccgaatgg 39273108

                                              
Query: 1092     gtaggaacaaccactgagtggtcttaagtt 1121
                |||||||||||||||||||| |||||||||
Sbjct: 39273107 gtaggaacaaccactgagtgctcttaagtt 39273078



 Score =  581 bits (293), Expect = e-163
 Identities = 543/625 (86%), Gaps = 1/625 (0%)
 Strand = Plus / Plus

                                                                            
Query: 495      aagtttgctgctgccactggagccactcctattgctggccgcttcactcctggaaccttc 554
                |||||| ||||| |||| |||||||| ||| |||||||| ||||||||||||||||||||
Sbjct: 32883095 aagttttctgctaccaccggagccacccctgttgctggctgcttcactcctggaaccttc 32883154

                                                                            
Query: 555      actaaccagatccaggcagccttccgggagccaagacttctggtggttactgatcccagg 614
                |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 32883155 actaaccagatccaggcagccttccgggagccaagacttctggtggttactgttcccagg 32883214

                                                                            
Query: 615      gctgaccaccagcctctcacagaggcctcttatgttaacctgcctaccattgctctgtgt 674
                | ||||||||||||||||  |||| ||||||||||| |||||||| |||  ||  |||||
Sbjct: 32883215 gatgaccaccagcctctcctagagacctcttatgttcacctgcctcccacggccatgtgt 32883274

                                                                            
Query: 675      aacacagactcacctctgcgttatgtggacattgccatcccgtgcaacaacaagggagct 734
                ||||||||||| |||||| || ||||||||||  |||||| |||||||| ||||||||||
Sbjct: 32883275 aacacagactctcctctgtgtcatgtggacatcaccatcctgtgcaacagcaagggagct 32883334

                                                                            
Query: 735      cactcagtgggtctgatgtggtggatgctcgcccgggaagttctgcgcatgcgtggcacc 794
                ||||  | |||||||||||||  |||||||||| ||||||||||| ||||| ||||||||
Sbjct: 32883335 cactttgagggtctgatgtggcagatgctcgcctgggaagttctgtgcatgtgtggcacc 32883394

                                                                            
Query: 795      atctcccgggaacacccatgggaagtcatgcctgacctctacttctacagagatcctgaa 854
                | |||| | |||||| ||||||| |||||||||||| ||| ||||| |||||||||||||
Sbjct: 32883395 acctccagtgaacactcatgggaggtcatgcctgacttctccttctgcagagatcctgaa 32883454

                                                                            
Query: 855      gagattgaaaaggaagagcaggccgcagctgagaaggctgtgaccaaggaggaatttcag 914
                ||||||| ||| |||||| |||| ||||||| ||| ||||||||||||||| ||||||||
Sbjct: 32883455 gagattgcaaacgaagagaaggcagcagctgggaaagctgtgaccaaggagtaatttcag 32883514

                                                                            
Query: 915      ggtgaatggactgcgccagctcctgagttcactgccactcaacctgaggtggcagattgg 974
                ||| ||||||| || || |||||||| ||||||||   | ||||||| |||| ||| || 
Sbjct: 32883515 ggtaaatggacggctcccgctcctgaattcactgctctttaacctgaagtgggagactga 32883574

                                                                            
Query: 975      tccgaaggtgtgcaggtgccttctgtgcccatccagcaattccctactgaagattggagt 1034
                || |||||  |||||||||| |||||||||||||||||  ||||| ||||||| ||||||
Sbjct: 32883575 tctgaaggcatgcaggtgccctctgtgcccatccagcaggtccct-ctgaagactggagt 32883633

                                                                            
Query: 1035     gctcagcctaccactgaagattggtctgcagctcccactgcgcaggccactgaatgggta 1094
                ||||||||| |||||||||| | | ||| ||||||| |||| ||  ||||||| |||| |
Sbjct: 32883634 gctcagcctgccactgaagacttgcctgaagctccccctgcccaaaccactgactgggga 32883693

                                         
Query: 1095     ggaacaaccactgagtggtcttaag 1119
                | |||||||||||||  ||||||||
Sbjct: 32883694 gaaacaaccactgagcagtcttaag 32883718



 Score =  133 bits (67), Expect = 2e-28
 Identities = 137/160 (85%), Gaps = 4/160 (2%)
 Strand = Plus / Plus

                                                                            
Query: 257      aatgaaagaggaggatgtcctcaagttccttgcagcaggaacccaccttggtggcaccaa 316
                |||||| ||||||||||||||||| | |||| ||||||||||| || |  |||||| |||
Sbjct: 32882874 aatgaaggaggaggatgtcctcaaatcccttccagcaggaacctacttaagtggcagcaa 32882933

                                                                            
Query: 317      ccttgacttccaaatggaacagtacatctacaaaaggaaaagtgatg----gcatctaca 372
                | ||| ||||||| |||||||||| ||||||||||||||||||||||    | |||||||
Sbjct: 32882934 ctttggcttccaagtggaacagtatatctacaaaaggaaaagtgatggtatgtatctaca 32882993

                                                        
Query: 373      tcataaatctgaagagaacctgggagaaacttctgttggc 412
                ||| ||||||| || |||||||| |||| |||||||||||
Sbjct: 32882994 tcaaaaatctggagtgaacctggcagaagcttctgttggc 32883033



 Score =  109 bits (55), Expect = 4e-21
 Identities = 319/402 (79%), Gaps = 15/402 (3%)
 Strand = Plus / Plus

                                                                            
Query: 316      accttgacttccaaatggaacagtacatctacaaaaggaaaagtgatggcatct-acatc 374
                ||||||||||||||||| || ||| ||||||||||||||| || |||||||||| |||||
Sbjct: 75449755 accttgacttccaaatgaaagagtccatctacaaaaggaacagagatggcatctcacatc 75449814

                                                                            
Query: 375      ataaatctgaagagaacctgggagaaacttctgttggcggctcgtgccatcgttgccatt 434
                || |||||||||  |||||||||||||||| |       |||| | |||  |||||||| 
Sbjct: 75449815 atcaatctgaaggaaacctgggagaaactttt-------gctcataccactgttgccatg 75449867

                                                                            
Query: 435      gaaaacccagccgatgtcagtgtcatatcctccaggaatactggccagcgagctgtgctg 494
                || ||||  |  |||||||    |||||| ||||||||||||| |||  |||||| ||||
Sbjct: 75449868 gacaacctggatgatgtca-caccatatcttccaggaatactgaccaaagagctgggctg 75449926

                                                                            
Query: 495      aagtttgctgctgccactggagccactcctattgctggccgcttcactcctggaaccttc 554
                | ||||||||||||  ||  ||| ||||   ||||| || | |||| |||||||| ||||
Sbjct: 75449927 atgtttgctgctgc--ctcaagctactcggcttgcttgctgtttcattcctggaaacttc 75449984

                                                                            
Query: 555      actaaccagatccaggcagccttccgggagccaagacttctggtggttactgatcccagg 614
                | |    ||||||||||||||||  ||||||    ||||| ||||||| |||| ||||||
Sbjct: 75449985 aatcgttagatccaggcagccttttgggagctgctacttcaggtggttgctgaccccagg 75450044

                                                                            
Query: 615      gctgaccaccagcctctcacagaggcctcttatgttaacctgcctaccattgc-tctgtg 673
                 |||||||||||||| | |||  ||| ||||| ||||||||||||||   ||| ||| ||
Sbjct: 75450045 actgaccaccagcctgtaacattggcatcttaggttaacctgcctac---tgcttctctg 75450101

                                                          
Query: 674      taacacagactcacctctgcgttatgtggacattgccatccc 715
                 |||||||| ||  ||||| | | ||||||||||||||||||
Sbjct: 75450102 aaacacagattcttctctgtgctgtgtggacattgccatccc 75450143


>Sscrofa_Chr02 
||          Length = 162569375

 Score =  615 bits (310), Expect = e-173
 Identities = 768/914 (84%), Gaps = 5/914 (0%)
 Strand = Plus / Plus

                                                                            
Query: 208      taacttaaagggagactttcacaatgtccggagccctcgatgtcctgcaaatgaaagagg 267
                |||||| |||||| ||||||||| | | | ||| ||  |||||||| |||||||| ||||
Sbjct: 88651635 taactttaagggaaactttcacagtattcagagtccctgatgtcctacaaatgaaggagg 88651694

                                                                            
Query: 268      aggatgtcctcaagttccttgcagcaggaacccaccttggtggcaccaaccttgacttcc 327
                ||||||| || || ||||||||||||||||||||| | |   ||| |||| |||||||||
Sbjct: 88651695 aggatgttcttaaattccttgcagcaggaacccacttagacagcatcaacgttgacttcc 88651754

                                                                            
Query: 328      aaatggaacagtacatctacaaaaggaaaagtgatggcatctacatcataaatctgaaga 387
                |||||||| |||||||||||||||||||| |||  ||||||||| |||||||||||||||
Sbjct: 88651755 aaatggaatagtacatctacaaaaggaaacgtggcggcatctacctcataaatctgaaga 88651814

                                                                            
Query: 388      gaacctgggagaaacttctgttggcggctcgtgccatcgttgccattgaaaacccagccg 447
                ||||||||||||| ||||    ||| |||| |||||| | ||| | ||||||| ||||  
Sbjct: 88651815 gaacctgggagaagcttccca-ggcagctcatgccattggtgctactgaaaacacagctc 88651873

                                                                            
Query: 448      atgtcagtgtcatatcctccaggaatactggccagcgagctgtgctga-agtttgctgct 506
                ||| |||| | | ||||||||| ||||||||||   || | ||||||  |||||||||||
Sbjct: 88651874 atgccagttttacatcctccagaaatactggcctatgaaccgtgctgccagtttgctgct 88651933

                                                                            
Query: 507      gccactggagccactcctattgctggccgcttcactcctggaaccttcactaaccagatc 566
                 ||| |  ||||||||||||  ||||| | ||||||||||||||||||||||||||||||
Sbjct: 88651934 cccaataaagccactcctatcactggctgtttcactcctggaaccttcactaaccagatc 88651993

                                                                            
Query: 567      caggcagccttccgggagccaagacttctggtggttactgatcccagggctgaccaccag 626
                ||||||||||||||||||||||||||| ||||||| ||||||| |||||||| |||||| 
Sbjct: 88651994 caggcagccttccgggagccaagacttgtggtggtcactgatctcagggctgcccaccaa 88652053

                                                                            
Query: 627      cctctcacagaggcctcttatgttaacctgcctaccattgctctgtgtaacacagactca 686
                |||||||||||| ||||||| ||| |||||||| ||| |||||   ||||||||||| | 
Sbjct: 88652054 cctctcacagagacctcttaagttgacctgcctgccactgctccacgtaacacagaccct 88652113

                                                                            
Query: 687      cctctgcgttatgtggacattgccatcccgtgcaacaacaagggagctcactcagtgggt 746
                 || |||||| |||| ||| |||||||||  | ||||  ||||||||||||||||| |||
Sbjct: 88652114 tctgtgcgttgtgtgaacactgccatcccaggtaacagtaagggagctcactcagtaggt 88652173

                                                                            
Query: 747      ctgatgtggtggatgctcgcccgggaagttctgcgcatgcgtggcaccatctcccg-gga 805
                ||| ||||||||| |||| ||| | |||||| |||||||| ||||| ||| | | | | |
Sbjct: 88652174 ctggtgtggtggaggctcacccagaaagttcagcgcatgcatggcatcattttctgtgaa 88652233

                                                                            
Query: 806      acacccatgggaagtcatgcctgacctctacttctacagagatcctgaagagattgaaaa 865
                ||||||| |||| ||||||||||| ||| ||||  |||||||||||||||||| ||||||
Sbjct: 88652234 acacccaagggaggtcatgcctgatctccacttagacagagatcctgaagagactgaaaa 88652293

                                                                            
Query: 866      ggaagagcaggccgcagctgagaaggctgtgaccaaggaggaatttcagggtgaatggac 925
                |||||||||||| | |||||||||||||||||||||||||| |||| ||||||||  |||
Sbjct: 88652294 ggaagagcaggcagaagctgagaaggctgtgaccaaggaggtattttagggtgaacagac 88652353

                                                                            
Query: 926      tgcgccagctcctgagttcactgccactcaacctgaggtggcagattggtccgaaggtgt 985
                  | |||||||||||||| |||||  ||||||||||||||||||| ||||| ||||||||
Sbjct: 88652354 -actccagctcctgagttgactgctcctcaacctgaggtggcagactggtctgaaggtgt 88652412

                                                                            
Query: 986      gcaggtgccttctgtgcccatccagcaattccctactgaagattggagtgctcagcctac 1045
                 ||||| || | ||||||||| | ||| |||||||| |||| |  || |||||||||| |
Sbjct: 88652413 tcaggtaccctatgtgcccattcggcagttccctaccgaaggtgtgattgctcagcctgc 88652472

                                                                            
Query: 1046     cactgaagattggtctgcagctcccactgcgcaggccactgaatgggtaggaacaaccac 1105
                |||||||||   | ||||||| ||| |||| |||||| ||||| | | ||||||||||| 
Sbjct: 88652473 cactgaagaaaagcctgcagcaccccctgctcaggccgctgaaagag-aggaacaaccaa 88652531

                              
Query: 1106     tgagtggtcttaag 1119
                ||| ||||||||||
Sbjct: 88652532 tgaatggtcttaag 88652545



 Score =  607 bits (306), Expect = e-171
 Identities = 519/587 (88%), Gaps = 6/587 (1%)
 Strand = Plus / Plus

                                                                            
Query: 290      agcaggaacccaccttggtggcaccaaccttgacttccaaatgga--acagtacatctac 347
                ||||||||||||| | ||||| |||||||| ||||||||||||||  |||||||||||||
Sbjct: 47865884 agcaggaacccacttaggtggaaccaacctggacttccaaatggagaacagtacatctac 47865943

                                                                            
Query: 348      aaaaggaaaagtgatggcatctacatcataaatctgaagagaacctgggagaaacttctg 407
                |||||||||||||| |||||||||||||||||||||||||||||| || |||| ||||||
Sbjct: 47865944 aaaaggaaaagtgagggcatctacatcataaatctgaagagaacccggaagaagcttctg 47866003

                                                                            
Query: 408      ttggcggctcgtgccatcgttgccattgaaaacccagccgatgtcagtgtcatatcctcc 467
                ||||| |||| |||||| | ||||||| ||||| |||| ||||||| || ||||||||||
Sbjct: 47866004 ttggcagctcctgccattgctgccattaaaaactcagctgatgtcaatgacatatcctcc 47866063

                                                                            
Query: 468      aggaatactggccagcgagctgtgctgaagtttgctgctgccactggagccactcctatt 527
                 ||||| |||||||| |||||||||| ||||||||| ||||||||||||||||| |||||
Sbjct: 47866064 tggaatgctggccagtgagctgtgctaaagtttgctcctgccactggagccacttctatt 47866123

                                                                            
Query: 528      gctggccgcttcactcctggaaccttcactaaccagatccaggcagccttccgggagcca 587
                |||||| | |||||||||| ||  ||| ||||||||||||| |||| ||||  |||||||
Sbjct: 47866124 gctggctgtttcactcctgcaaggttccctaaccagatccaagcaggcttctaggagcca 47866183

                                                                            
Query: 588      agacttctggtggttactgatcccagggctgaccaccagcctctcacagaggcctcttat 647
                |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 47866184 agacttctggtggttaatgatcccagggctgaccaccagcctctcacagaggcctcttag 47866243

                                                                            
Query: 648      gttaacctgcctaccattgctctgtgtaacacagactcacctctgcgttatgtggacatt 707
                ||| ||   ||||||| |||||||||||||||||| |  |||||||||||||||||||| 
Sbjct: 47866244 gttcactcacctaccactgctctgtgtaacacagagtttcctctgcgttatgtggacatc 47866303

                                                                            
Query: 708      gccatcccgtgcaacaacaagggagctcactcagtgggtctgatgtggtggatgctcgcc 767
                ||||||| |||   |||||||||||||||||||||||||||||||  || |||||| |||
Sbjct: 47866304 gccatcctgtg---caacaagggagctcactcagtgggtctgatgctgt-gatgcttgcc 47866359

                                                                            
Query: 768      cgggaagttctgcgcatgcgtggcaccatctcccgggaacacccatgggaagtcatgcct 827
                ||||| ||||||| ||||| || ||||||||||   |||||||||||||| |||||  ||
Sbjct: 47866360 cgggaggttctgcccatgcatgacaccatctcctatgaacacccatgggaggtcatttct 47866419

                                                               
Query: 828      gacctctacttctacagagatcctgaagagattgaaaaggaagagca 874
                ||||||||||||||||||| || ||||| |||| |||||||||||||
Sbjct: 47866420 gacctctacttctacagagttcgtgaagtgattaaaaaggaagagca 47866466



 Score =  176 bits (89), Expect = 2e-41
 Identities = 215/256 (83%), Gaps = 7/256 (2%)
 Strand = Plus / Plus

                                                                            
Query: 862      aaaaggaagagcaggccgcagctgagaaggctgtgaccaaggaggaatttcagggtgaat 921
                |||||||||||||||  |||||   ||||||||||||||||||||||||||||| |||||
Sbjct: 47866649 aaaaggaagagcaggtggcagccaggaaggctgtgaccaaggaggaatttcaggatgaat 47866708

                                                                            
Query: 922      ggactgcgccagctcctgagttcactgccactcaacctgaggtggcagattggtccgaag 981
                ||| |||      ||||||||||||||| |||||||||||||| ||||  |||||| |||
Sbjct: 47866709 ggattgc------tcctgagttcactgctactcaacctgaggtcgcaggctggtccaaag 47866762

                                                                            
Query: 982      gtgtgcaggtgccttctgtgcccatccagcaattccctactgaagattggagtgctcagc 1041
                |  |||||| ||| || ||| |||  ||||| ||||  |||||| | || ||||||||| 
Sbjct: 47866763 gcatgcaggcgccctccgtgtccactcagcagttcctcactgaaaactg-agtgctcagt 47866821

                                                                            
Query: 1042     ctaccactgaagattggtctgcagctcccactgcgcaggccactgaatgggtaggaacaa 1101
                | ||  ||||| | |||||||||||||||||||| |||||||| ||||||| ||||||||
Sbjct: 47866822 ccactgctgaaaactggtctgcagctcccactgctcaggccacagaatgggcaggaacaa 47866881

                                
Query: 1102     ccactgagtggtctta 1117
                ||||||||||||||||
Sbjct: 47866882 ccactgagtggtctta 47866897



 Score =  161 bits (81), Expect = 1e-36
 Identities = 147/169 (86%)
 Strand = Plus / Plus

                                                                             
Query: 232       tgtccggagccctcgatgtcctgcaaatgaaagaggaggatgtcctcaagttccttgcag 291
                 ||||| ||||||| ||||||||||||| ||||| ||||||||||||||| |||||||  |
Sbjct: 143664528 tgtccagagcccttgatgtcctgcaaaggaaaggggaggatgtcctcaaattccttgtgg 143664587

                                                                             
Query: 292       caggaacccaccttggtggcaccaaccttgacttccaaatggaacagtacatctacaaaa 351
                  |||||| ||| |  || |||||| |||||||||||||||||||||||| ||  ||| ||
Sbjct: 143664588 aaggaactcacttcagtagcaccagccttgacttccaaatggaacagtatattcacacaa 143664647

                                                                  
Query: 352       ggaaaagtgatggcatctacatcataaatctgaagagaacctgggagaa 400
                 ||| || |||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 143664648 ggagaaatgatggtatctgcatcataaatctgaagagaacctgggagaa 143664696



 Score =  137 bits (69), Expect = 2e-29
 Identities = 313/391 (80%), Gaps = 10/391 (2%)
 Strand = Plus / Plus

                                                                            
Query: 205      tcgtaacttaaagggagactttcacaatgtccggagccctcgatgtcctgcaaatgaaag 264
                |||||| ||||||| | | |||||||||||||  | |||| |||||||||||||||||||
Sbjct: 37349735 tcgtaagttaaaggaaaattttcacaatgtccaaatcccttgatgtcctgcaaatgaaag 37349794

                                                                            
Query: 265      aggaggatgtcctcaagttccttgcagcaggaacccaccttggtggcaccaaccttgact 324
                || |||||||| |||| || ||||||||| ||||||   | | | ||| ||  |||||||
Sbjct: 37349795 agaaggatgtcttcaactttcttgcagcaagaaccc---tagatagcatcagtcttgact 37349851

                                                                            
Query: 325      tccaaatggaacagtacatctacaaaaggaaaagtgatggcatctacatcataaatctga 384
                 |||||     ||||||||||||||||| ||||||||||||||  |  | | | | |  |
Sbjct: 37349852 accaaa-----cagtacatctacaaaagaaaaagtgatggcattaaacttacacacccaa 37349906

                                                                            
Query: 385      agagaacctgggagaaacttctgttggcggctcgtgccatcgttgccattgaaaacccag 444
                |||| || |||||||| | |||| || | |||| |||||| ||||||  |||||||   |
Sbjct: 37349907 agaggac-tgggagaagcctctgctgacagctcttgccattgttgcctctgaaaacag-g 37349964

                                                                            
Query: 445      ccgatgtcagtgtcatatcctccaggaatactggccagcgagctgtgctgaagtttgctg 504
                 | |  |  ||||  ||||||||| || |||||| ||| |  ||||||||| ||||||||
Sbjct: 37349965 acaacattggtgttgtatcctccaagattactggtcagtgcactgtgctgaggtttgctg 37350024

                                                                            
Query: 505      ctgccactggagccactcctattgctggccgcttcactcctggaaccttcactaaccaga 564
                |||||||||||||||||||||| |||||| ||||||||||||||||| || ||||  || 
Sbjct: 37350025 ctgccactggagccactcctatcgctggctgcttcactcctggaaccctccctaatgagt 37350084

                                               
Query: 565      tccaggcagccttccgggagccaagacttct 595
                |||| ||| ||||| ||||||||||||||||
Sbjct: 37350085 tccaagcaaccttctgggagccaagacttct 37350115



 Score = 97.6 bits (49), Expect = 1e-17
 Identities = 82/93 (88%)
 Strand = Plus / Plus

                                                                            
Query: 207      gtaacttaaagggagactttcacaatgtccggagccctcgatgtcctgcaaatgaaagag 266
                |||||||||||||| |||||||||||||| ||| |||| ||||||||  | || || |||
Sbjct: 47865532 gtaacttaaagggaaactttcacaatgtctggaacccttgatgtcctttatataaaggag 47865591

                                                 
Query: 267      gaggatgtcctcaagttccttgcagcaggaacc 299
                |||||||||||||| ||||||| ||||||||||
Sbjct: 47865592 gaggatgtcctcaaattccttgtagcaggaacc 47865624



 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 77/88 (87%), Gaps = 1/88 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1035     gctcagcctaccactgaagattggtctgcagctcccactgcgcaggccactgaatgggta 1094
                |||||||| |||||||  || ||| |||||||||||||||| ||||||||||||  ||||
Sbjct: 37350518 gctcagcccaccactggggactgggctgcagctcccactgctcaggccactgaacaggta 37350577

                                            
Query: 1095     gg-aacaaccactgagtggtcttaagtt 1121
                || ||  |||||||||||||||||||||
Sbjct: 37350578 ggaaatgaccactgagtggtcttaagtt 37350605



 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 64/72 (88%), Gaps = 2/72 (2%)
 Strand = Plus / Minus

                                                                            
Query: 338      gtacatctacaaaaggaaa--agtgatggcatctacatcataaatctgaagagaacctgg 395
                |||||||| | ||||||||  ||||||||||||| ||||||||| |||||||| ||||||
Sbjct: 40361799 gtacatctgccaaaggaaataagtgatggcatctccatcataaacctgaagaggacctgg 40361740

                            
Query: 396      gagaaacttctg 407
                 |||||||||||
Sbjct: 40361739 cagaaacttctg 40361728



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 74/86 (86%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                             
Query: 605       tgatcccagggctgaccaccagcctctcacagaggcctcttatgttaacctgcctaccat 664
                 |||||||||||| ||||||||| ||||||||| ||| ||||||||||||||| || |  |
Sbjct: 134479377 tgatcccagggccgaccaccagtctctcacag-ggcatcttatgttaacctgtctgcagt 134479319

                                           
Query: 665       tgctctgtgtaacacagactcacctc 690
                  |||||| | ||||||||||| ||||
Sbjct: 134479318 ggctctgggcaacacagactctcctc 134479293



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 74/86 (86%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                             
Query: 605       tgatcccagggctgaccaccagcctctcacagaggcctcttatgttaacctgcctaccat 664
                 |||||||||||| ||||||||| ||||||||| ||| ||||||||||||||| || |  |
Sbjct: 134502836 tgatcccagggccgaccaccagtctctcacag-ggcatcttatgttaacctgtctgcagt 134502778

                                           
Query: 665       tgctctgtgtaacacagactcacctc 690
                  |||||| | ||||||||||| ||||
Sbjct: 134502777 ggctctgggcaacacagactctcctc 134502752



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 131/163 (80%), Gaps = 2/163 (1%)
 Strand = Plus / Minus

                                                                            
Query: 544      ctggaaccttcactaaccagatccaggcagccttccgggagccaagacttctggtggtta 603
                |||||||||| ||||| ||||| |||| || ||||| ||| | | | ||||||||| |||
Sbjct: 40361569 ctggaacctttactaatcagattcaggaaggcttccaggaactacgtcttctggtgttta 40361510

                                                                            
Query: 604      ctgatcccagggctgaccaccagcctctcacagaggcctcttatgttaacctgcctacca 663
                 ||||||||| ||  ||||| |||||||  | |||   |||||||| |||||| || || 
Sbjct: 40361509 ttgatcccagagcctaccactagcctcttccggagctgtcttatgtgaacctgtctgcct 40361450

                                                           
Query: 664      ttgctctgtgtaacacagactcacctctgcgttatgtggacat 706
                ||||||||||||  |||||||| |||||||  ||||| |||||
Sbjct: 40361449 ttgctctgtgta--acagactctcctctgcactatgttgacat 40361409



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 95/114 (83%), Gaps = 2/114 (1%)
 Strand = Plus / Minus

                                                                            
Query: 837      ttctacagagatcctgaa-gagattgaaaaggaagagcaggccgcagctgagaaggctgt 895
                ||||||||| |||||||| ||||||| |||||||| |||||| |  ||||  |||| |||
Sbjct: 40361298 ttctacaga-atcctgaaagagattgtaaaggaagtgcaggctgatgctggaaaggatgt 40361240

                                                                      
Query: 896      gaccaaggaggaatttcagggtgaatggactgcgccagctcctgagttcactgc 949
                |||| ||||||||||||| |||||    || || |||||||||||||| |||||
Sbjct: 40361239 gacccaggaggaatttcaaggtgagcataccgctccagctcctgagtttactgc 40361186


>Sscrofa_Chr04 
||          Length = 143465943

 Score =  599 bits (302), Expect = e-168
 Identities = 755/899 (83%), Gaps = 14/899 (1%)
 Strand = Plus / Plus

                                                                            
Query: 224      tttcacaatgtccggagccctcgatgtcctgcaaatgaaagaggaggatgtcctcaagtt 283
                |||||||||||| |||||||| | ||| ||| |||||||| ||||||||||| |||| ||
Sbjct: 35717278 tttcacaatgtctggagcccttgctgttctgaaaatgaaaaaggaggatgtcttcaaatt 35717337

                                                                            
Query: 284      ccttgcagcaggaacccaccttggtggcaccaaccttgacttccaaatggaacagtacat 343
                || |||||||||||||||| | | |||| |||| ||||||| ||||||||||||||||||
Sbjct: 35717338 ccctgcagcaggaacccacttagttggccccaatcttgactgccaaatggaacagtacat 35717397

                                                                            
Query: 344      ctacaaaaggaaaagtgatggcatctacatcataaatctgaagagaacctgggagaaact 403
                ||||| | || ||||||||||||||| |||  |||||||||||||| | ||| |||| ||
Sbjct: 35717398 ctacagatgggaaagtgatggcatctgcattgtaaatctgaagagaccatggaagaagct 35717457

                                                                            
Query: 404      tctgttggcggctcgtgccatcgttgccattgaaaacccagccgatgtcagtgtcatatc 463
                ||||||||| | ||||||||| | || ||||||||||||| | |||||||||| |||| |
Sbjct: 35717458 tctgttggcagttcgtgccattgctgtcattgaaaacccacctgatgtcagtgccatacc 35717517

                                                                            
Query: 464      ctccaggaatactggccagcga--gctgtgctgaagtttgctgctgccactggagccact 521
                || ||||||||||| |||||||   |||||||||| ||||||||||| ||||||||||||
Sbjct: 35717518 cttcaggaatactgaccagcgaatactgtgctgaa-tttgctgctgctactggagccact 35717576

                                                                            
Query: 522      cctattgctggccgcttcactcctggaaccttcactaaccagatccaggcagccttccgg 581
                ||||| |||| | |||||||||||||||||||  |  ||||||||||||||||| |    
Sbjct: 35717577 cctatggctgtctgcttcactcctggaacctttgccgaccagatccaggcagccct---- 35717632

                                                                            
Query: 582      gagccaagacttctggtggttactgatcccagggctgaccaccagcctctcacagaggcc 641
                   |||| ||||| ||||||||||| ||||||  |||||||| ||| |||||||||||| 
Sbjct: 35717633 ---ccaaaacttcgggtggttactggtcccagatctgaccacaagcttctcacagaggct 35717689

                                                                            
Query: 642      tcttatgttaacctgcctaccattgctctgtgtaacacagactcacctctgcgttatgtg 701
                 || |||||||||  |||||  |||||||||||||||||||| | |||||| ||||||||
Sbjct: 35717690 gctcatgttaaccctcctactgttgctctgtgtaacacagaccctcctctgtgttatgtg 35717749

                                                                            
Query: 702      gacattgccatcccgtgcaacaacaagggagctcactcagtgggtctgatgtggtggatg 761
                |||||||||||||   |||||||  |||| ||||||||||||||||||||||||| ||||
Sbjct: 35717750 gacattgccatcctacgcaacaa-tagggggctcactcagtgggtctgatgtggtagatg 35717808

                                                                            
Query: 762      ctcgcccgggaagttctgcgcatgcgtggcaccatctcccgggaacacccatgggaagtc 821
                || | |||||  || ||   ||||| ||||||||||||| | |||||| ||  ||| | |
Sbjct: 35717809 cttggccgggtggtcctatacatgcctggcaccatctcctgtgaacactcacaggaggcc 35717868

                                                                            
Query: 822      atgcctgacctctacttctacagagatcctgaagagattgaaaaggaagagcaggccgca 881
                |||||||| |||||||||||||||||||||||||||||||||||||| || ||||  |||
Sbjct: 35717869 atgcctgatctctacttctacagagatcctgaagagattgaaaaggaggaacagg-agca 35717927

                                                                            
Query: 882      gctgagaaggctgtgaccaaggaggaatttcagggtgaatggactgcgccagctcctgag 941
                |||||| |||  ||||||||||||||||||||||||||||| |  || ||||||| ||||
Sbjct: 35717928 gctgagcaggtggtgaccaaggaggaatttcagggtgaatgcatggctccagctcttgag 35717987

                                                                            
Query: 942      ttcactgccactcaacctgaggtggcagattggtcc-gaaggtgtgcaggtgccttctgt 1000
                |||||||  ||||||| |||| ||||| | ||| || |||||  |||||||| | |||||
Sbjct: 35717988 ttcactgttactcaacatgagatggcaaactgggcctgaaggcatgcaggtgtcctctgt 35718047

                                                                            
Query: 1001     gcccatccagcaattccctactgaagattggagtgctcagcctaccactgaagattggtc 1060
                |||| ||||| || ||||| |||| || |||||  |||| ||| ||||| ||||    ||
Sbjct: 35718048 gcccctccagaaactccctcctgaggactggagaactcaacctgccactaaaga-ccatc 35718106

                                                                           
Query: 1061     tgcagctcccactgcgcaggccactgaatgggtaggaacaaccactgagtggtcttaag 1119
                ||||||||| ||||| ||| || ||||||||| | ||||||  ||||||||||||||||
Sbjct: 35718107 tgcagctcctactgctcagacctctgaatggggaagaacaagaactgagtggtcttaag 35718165



 Score =  204 bits (103), Expect = 8e-50
 Identities = 423/524 (80%), Gaps = 18/524 (3%)
 Strand = Plus / Minus

                                                                             
Query: 210       acttaaagggagactttcacaatgtccggagccctcgatgtcctgcaaatgaaagaggag 269
                 ||||||||||||| ||| ||||| ||| ||||||| |||||  ||||||||||   | ||
Sbjct: 115143147 acttaaagggagatttt-acaatatccagagcccttgatgttatgcaaatgaa---gaag 115143092

                                                                             
Query: 270       gatgtcctcaagttccttgcagcaggaacccaccttggtggcaccaaccttgacttccaa 329
                 ||||||||||  ||||||   |||||||||||| | | |||||||| | |||||||||||
Sbjct: 115143091 gatgtcctcagattccttaaggcaggaacccacttagatggcaccagctttgacttccaa 115143032

                                                                             
Query: 330       atggaacagtacatctacaaaaggaaaagtgatggcatctacatcataaatctgaagaga 389
                 || ||||       |||||||||| |||||||| |||||||||||||||||||| |||||
Sbjct: 115143031 atagaaccc-----ctacaaaaggtaaagtgatagcatctacatcataaatctggagaga 115142977

                                                                             
Query: 390       acctgggagaaacttctgttggcggctcgtgccatcgttgccattgaaaacccagccgat 449
                 || |||  ||| |||||| ||||   ||||||||| ||||||||| |   |||||| |||
Sbjct: 115142976 acttggcggaagcttctgctggccattcgtgccattgttgccattcatttcccagctgat 115142917

                                                                             
Query: 450       gtcagtgtcatatcctccaggaatactggccagcgagctgtgctgaagtttgctgctgcc 509
                 |||       ||||||||  |||||||  | ||| |||||||||| | ||||||||||||
Sbjct: 115142916 gtct------tatcctccgtgaatactctc-agccagctgtgctgcactttgctgctgcc 115142864

                                                                             
Query: 510       actggagccactcctattgctggccgcttcactcctggaaccttcactaaccagatccag 569
                 |||||||||||||||  || ||| | ||||||||| |||| | |||||| |||| |  ||
Sbjct: 115142863 actggagccactcctgctg-tgggcacttcactcccggaagcctcactacccagttgtag 115142805

                                                                             
Query: 570       gcagccttccgggagccaagacttctggtggttactgatcccagggctgaccaccagcct 629
                 ||||||| | ||||| ||||||||  ||||||| |||||| ||||||||| |||||||||
Sbjct: 115142804 gcagcct-cagggagtcaagactttcggtggttcctgatctcagggctgagcaccagcct 115142746

                                                                             
Query: 630       ctcacagaggcctcttatgttaacctgcctaccattgctctgtgtaacacagactcacct 689
                 | |||||| || ||||||||||| ||||||||||   |||    |||||||||||| || 
Sbjct: 115142745 cccacagaagcatcttatgttaatctgcctaccagccctccccataacacagactctccg 115142686

                                                             
Query: 690       ctgcgttatgtggacattgccatcccgtgcaacaacaagggagc 733
                 ||| |||||||||| ||||||| ||  |||  ||||||||||||
Sbjct: 115142685 ctgtgttatgtggatattgccacccaatgctgcaacaagggagc 115142642



 Score =  137 bits (69), Expect = 2e-29
 Identities = 231/284 (81%), Gaps = 2/284 (0%)
 Strand = Plus / Minus

                                                                             
Query: 836       cttctacagagatcctgaagagattgaaaaggaagagcaggccgcagctgagaaggctgt 895
                 ||||||||| ||||| ||||||||||| ||||| | ||| || || ||||||| ||||||
Sbjct: 115142578 cttctacagggatcccgaagagattgacaaggatgggcaagcggccgctgagacggctgt 115142519

                                                                             
Query: 896       gaccaaggaggaatttcagggtgaatggactgcgccagctcctgagttcactgccactca 955
                 ||| ||||||  |||||||| || ||||||  | |||||||| |||||||||||||||||
Sbjct: 115142518 gactaaggagagatttcaggctgtatggaccactccagctcccgagttcactgccactca 115142459

                                                                             
Query: 956       acctgaggtggcagattggtccgaaggtgtgcaggtgccttctgtgcccatccagcaatt 1015
                 |||||| ||  |||| || |||||||| |||| || ||| |||||||   ||||||| ||
Sbjct: 115142458 acctgaagtcacagactgatccgaaggcgtgcgggcgccctctgtgcgtgtccagcagtt 115142399

                                                                             
Query: 1016      ccctactgaagattggagtgctcagcctaccactgaagattggtctgcagctcccactgc 1075
                 ||| ||||| | |  ||| |||||||| ||| |||| || ||||||||||  ||||| ||
Sbjct: 115142398 ccccactgacggtcagagggctcagcccacccctgaggactggtctgcag--cccaccgc 115142341

                                                             
Query: 1076      gcaggccactgaatgggtaggaacaaccactgagtggtcttaag 1119
                  ||| || |   | ||||| |||||||||| |||||||||||||
Sbjct: 115142340 tcagacccccacaagggtaagaacaaccaccgagtggtcttaag 115142297



 Score = 77.8 bits (39), Expect = 1e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                                
Query: 1057      ggtctgcagctcccactgcgcaggccactgaatgggtaggaacaacc 1103
                 ||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 136355360 ggtctgcagctcccactgctcaggccactgagtgggtaggaacaacc 136355314


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 34,795,148
Number of extensions: 506
Number of successful extensions: 506
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 418
Number of HSP's successfully gapped: 150
Length of query: 1214
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1193
Effective length of database: 2,808,413,156
Effective search space: 3350436895108
Effective search space used: 3350436895108
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)