Animal-Genome cDNA 20110601C-000239


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000239
         (1907 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001028790.1| actin, cytoplasmic 2 [Bos taurus].                758   0.0  
Alignment   gi|NP_776404.2| actin, cytoplasmic 1 [Bos taurus].                   754   0.0  
Alignment   gi|NP_001029674.1| actin, aortic smooth muscle [Bos taurus].         724   0.0  
Alignment   gi|NP_001013610.1| actin, gamma-enteric smooth muscle [Bos taur...   724   0.0  
Alignment   gi|NP_001029757.1| actin, alpha cardiac muscle 1 [Bos taurus].       723   0.0  
Alignment   gi|XP_002696363.1| PREDICTED: beta actin-like [Bos taurus].          719   0.0  
Alignment   gi|XP_001249299.2| PREDICTED: beta actin [Bos taurus].               719   0.0  
Alignment   gi|NP_776650.1| actin, alpha skeletal muscle [Bos taurus].           719   0.0  
Alignment   gi|NP_001096808.1| beta-centractin [Bos taurus].                     429   e-120
Alignment   gi|NP_001180177.1| alpha-centractin [Bos taurus].                    425   e-119

>ref|NP_001028790.1| actin, cytoplasmic 2 [Bos taurus].
          Length = 375

 Score =  758 bits (1957), Expect = 0.0
 Identities = 375/375 (100%), Positives = 375/375 (100%)
 Frame = +2

Query: 98   MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|NP_776404.2| actin, cytoplasmic 1 [Bos taurus].
          Length = 375

 Score =  754 bits (1947), Expect = 0.0
 Identities = 371/375 (98%), Positives = 375/375 (100%)
 Frame = +2

Query: 98   MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            M+++IAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|NP_001029674.1| actin, aortic smooth muscle [Bos taurus].
          Length = 377

 Score =  724 bits (1870), Expect = 0.0
 Identities = 353/374 (94%), Positives = 363/374 (97%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            EE+  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_001013610.1| actin, gamma-enteric smooth muscle [Bos taurus].
          Length = 376

 Score =  724 bits (1868), Expect = 0.0
 Identities = 353/374 (94%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            EEE  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3    EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 63   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 122

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 123  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 182

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 183  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 242

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 243  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 302

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK E
Sbjct: 303  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPE 362

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 363  YDEAGPSIVHRKCF 376


>ref|NP_001029757.1| actin, alpha cardiac muscle 1 [Bos taurus].
          Length = 377

 Score =  723 bits (1865), Expect = 0.0
 Identities = 353/374 (94%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            +EE  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    DEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|XP_002696363.1| PREDICTED: beta actin-like [Bos taurus].
          Length = 376

 Score =  719 bits (1857), Expect = 0.0
 Identities = 347/374 (92%), Positives = 365/374 (97%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            ++E++ALV+DNGSGMCKAGF GDDAPRAVFPS+VGRPRHQGVMVGMGQKD YVGDEAQSK
Sbjct: 3    DDELSALVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGVMVGMGQKDCYVGDEAQSK 62

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAP+EHP+LLTEAPLNPK NREKMTQ
Sbjct: 63   RGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPDEHPILLTEAPLNPKINREKMTQ 122

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFE FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 123  IMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 182

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSFTTTAEREIVRD+KEKLCYVALDFEQEM + A+SSSLE+SYE
Sbjct: 183  GRDLTDYLMKILTERGYSFTTTAEREIVRDVKEKLCYVALDFEQEMVSTAASSSLERSYE 242

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPEA+FQPSFLG+ES GIHETTFNSIMKCDVDIRKDLYANTVLSG
Sbjct: 243  LPDGQVITIGNERFRCPEAIFQPSFLGIESSGIHETTFNSIMKCDVDIRKDLYANTVLSG 302

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            G+TMYPGIA+RMQKEI ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303  GSTMYPGIAERMQKEIVALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GP IVHRKCF
Sbjct: 363  YDEAGPPIVHRKCF 376


>ref|XP_001249299.2| PREDICTED: beta actin [Bos taurus].
          Length = 376

 Score =  719 bits (1857), Expect = 0.0
 Identities = 347/374 (92%), Positives = 365/374 (97%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            ++E++ALV+DNGSGMCKAGF GDDAPRAVFPS+VGRPRHQGVMVGMGQKD YVGDEAQSK
Sbjct: 3    DDELSALVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGVMVGMGQKDCYVGDEAQSK 62

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAP+EHP+LLTEAPLNPK NREKMTQ
Sbjct: 63   RGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPDEHPILLTEAPLNPKINREKMTQ 122

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFE FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 123  IMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 182

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSFTTTAEREIVRD+KEKLCYVALDFEQEM + A+SSSLE+SYE
Sbjct: 183  GRDLTDYLMKILTERGYSFTTTAEREIVRDVKEKLCYVALDFEQEMVSTAASSSLERSYE 242

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPEA+FQPSFLG+ES GIHETTFNSIMKCDVDIRKDLYANTVLSG
Sbjct: 243  LPDGQVITIGNERFRCPEAIFQPSFLGIESSGIHETTFNSIMKCDVDIRKDLYANTVLSG 302

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            G+TMYPGIA+RMQKEI ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303  GSTMYPGIAERMQKEIVALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GP IVHRKCF
Sbjct: 363  YDEAGPPIVHRKCF 376


>ref|NP_776650.1| actin, alpha skeletal muscle [Bos taurus].
          Length = 377

 Score =  719 bits (1855), Expect = 0.0
 Identities = 350/374 (93%), Positives = 361/374 (96%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            E+E  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN V+SG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL SLSTFQQMWI+KQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILRSLSTFQQMWITKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_001096808.1| beta-centractin [Bos taurus].
          Length = 376

 Score =  429 bits (1102), Expect = e-120
 Identities = 198/369 (53%), Positives = 275/369 (74%), Gaps = 1/369 (0%)
 Frame = +2

Query: 119  LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 298
            +VIDNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L +
Sbjct: 12   VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEHRGLLAI 71

Query: 299  KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 475
            +YP+EHG+V +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP  NREK  ++ FET
Sbjct: 72   RYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFET 131

Query: 476  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 655
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VP+YEG+A+PH+I+R+D+AGRD++
Sbjct: 132  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPVYEGFAMPHSIMRVDIAGRDVS 191

Query: 656  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 835
             YL  +L + G  F T+AE E+VR IKE+ CY++++ +++ A        +  Y LPDG 
Sbjct: 192  RYLRLLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKDEALETE----KVQYTLPDGS 247

Query: 836  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 1015
             + +G  RFR PE LFQP  +G ES G+HE    +I K D+D+R+ L+AN +LSGG+T++
Sbjct: 248  TLNVGPARFRAPELLFQPDLIGDESEGLHEVLVFAIHKSDMDLRRTLFANIMLSGGSTLF 307

Query: 1016 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 1195
             G  DR+  E+  LAP  +KIKI AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 308  KGFGDRLLSEVKKLAPKDVKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 367

Query: 1196 PSIVHRKCF 1222
               +HRK F
Sbjct: 368  SRAIHRKTF 376


>ref|NP_001180177.1| alpha-centractin [Bos taurus].
          Length = 376

 Score =  425 bits (1092), Expect = e-119
 Identities = 197/369 (53%), Positives = 276/369 (74%), Gaps = 1/369 (0%)
 Frame = +2

Query: 119  LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 298
            +VIDNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 12   VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 71

Query: 299  KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 475
            +YP+EHGIV +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP+ NRE+  ++ FET
Sbjct: 72   RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 131

Query: 476  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 655
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 132  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 191

Query: 656  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 835
             +L   L + GY F +++E EIV+ IKE+ CY++++ +++       +     Y LPDG 
Sbjct: 192  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 247

Query: 836  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 1015
             I IG  RFR PE LF+P  +G ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 248  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 307

Query: 1016 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 1195
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 308  KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 367

Query: 1196 PSIVHRKCF 1222
               +HRK F
Sbjct: 368  ARSIHRKTF 376


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 64,746,183
Number of extensions: 1735999
Number of successful extensions: 7073
Number of sequences better than 1.0e-05: 39
Number of HSP's gapped: 6967
Number of HSP's successfully gapped: 40
Length of query: 635
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 527
Effective length of database: 14,107,870
Effective search space: 7434847490
Effective search space used: 7434847490
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000239
         (1907 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_533132.2| PREDICTED: hypothetical protein XP_533132 [Cani...   752   0.0  
Alignment   gi|NP_001182774.1| actin, cytoplasmic 1 [Canis lupus familiaris].    752   0.0  
Alignment   gi|XP_861856.1| PREDICTED: similar to cytoplasmic beta-actin is...   741   0.0  
Alignment   gi|XP_534781.2| PREDICTED: similar to Actin, aortic smooth musc...   724   0.0  
Alignment   gi|XP_533002.2| PREDICTED: similar to Actin, gamma-enteric smoo...   724   0.0  
Alignment   gi|XP_535424.1| PREDICTED: similar to Actin, alpha cardiac (Alp...   723   0.0  
Alignment   gi|XP_544346.1| PREDICTED: similar to Actin, cytoplasmic 1 (Bet...   715   0.0  
Alignment   gi|NP_001003349.1| beta-actin-like [Canis lupus familiaris].         705   0.0  
Alignment   gi|XP_536888.2| PREDICTED: similar to cytoplasmic beta-actin is...   700   0.0  
Alignment   gi|XP_536230.2| PREDICTED: similar to cytoplasmic beta-actin [C...   684   0.0  

>ref|XP_533132.2| PREDICTED: hypothetical protein XP_533132 [Canis familiaris].
          Length = 375

 Score =  752 bits (1942), Expect = 0.0
 Identities = 372/375 (99%), Positives = 373/375 (99%)
 Frame = +2

Query: 98   MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNW+DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK N EKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWEDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKTNGEKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|NP_001182774.1| actin, cytoplasmic 1 [Canis lupus familiaris].
          Length = 375

 Score =  752 bits (1941), Expect = 0.0
 Identities = 370/375 (98%), Positives = 374/375 (99%)
 Frame = +2

Query: 98   MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            M+++IAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFL MESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLSMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|XP_861856.1| PREDICTED: similar to cytoplasmic beta-actin isoform 9 [Canis
            familiaris].
          Length = 376

 Score =  741 bits (1914), Expect = 0.0
 Identities = 368/376 (97%), Positives = 372/376 (98%), Gaps = 1/376 (0%)
 Frame = +2

Query: 98   MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            M+++IAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFL-GMESCGIHETTFNSIMKCDVDIRKDLYANTVL 994
            ELPDGQVITIGNERFRCPEALF   FL GMESCGIHETTFNSIMKCDVDIRKDLYANTVL
Sbjct: 241  ELPDGQVITIGNERFRCPEALFHFCFLPGMESCGIHETTFNSIMKCDVDIRKDLYANTVL 300

Query: 995  SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 1174
            SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 301  SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 360

Query: 1175 QEYDESGPSIVHRKCF 1222
            QEYDESGPSIVHRKCF
Sbjct: 361  QEYDESGPSIVHRKCF 376


>ref|XP_534781.2| PREDICTED: similar to Actin, aortic smooth muscle (Alpha-actin 2)
            [Canis familiaris].
          Length = 377

 Score =  724 bits (1870), Expect = 0.0
 Identities = 353/374 (94%), Positives = 363/374 (97%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            EE+  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|XP_533002.2| PREDICTED: similar to Actin, gamma-enteric smooth muscle (Smooth
            muscle gamma actin) (Alpha-actin 3) [Canis familiaris].
          Length = 376

 Score =  724 bits (1868), Expect = 0.0
 Identities = 353/374 (94%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            EEE  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3    EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 63   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 122

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 123  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 182

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 183  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 242

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 243  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 302

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK E
Sbjct: 303  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPE 362

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 363  YDEAGPSIVHRKCF 376


>ref|XP_535424.1| PREDICTED: similar to Actin, alpha cardiac (Alpha-cardiac actin)
            isoform 3 [Canis familiaris].
          Length = 377

 Score =  723 bits (1865), Expect = 0.0
 Identities = 353/374 (94%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            +EE  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    DEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|XP_544346.1| PREDICTED: similar to Actin, cytoplasmic 1 (Beta-actin 1) [Canis
            familiaris].
          Length = 376

 Score =  715 bits (1846), Expect = 0.0
 Identities = 344/374 (91%), Positives = 364/374 (97%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            ++E++ALV+DNGSGMCKAGF GDDAPRAVFPS+VGRPRHQGVMVGMGQKD YVGDEAQSK
Sbjct: 3    DDELSALVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGVMVGMGQKDCYVGDEAQSK 62

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAP+EHP+LLTEAPLNPK NREKMTQ
Sbjct: 63   RGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPDEHPILLTEAPLNPKINREKMTQ 122

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFE FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 123  IMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 182

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGY+FTTTAEREIVRD+KEKLCYVALDFEQEM +AA+SSSLE+SYE
Sbjct: 183  GRDLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMGSAAASSSLERSYE 242

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVIT+GNERFRCPE++FQPSFLG+ES GIHETTFNSIMKCDVDIRKDLYAN VLSG
Sbjct: 243  LPDGQVITLGNERFRCPESIFQPSFLGIESSGIHETTFNSIMKCDVDIRKDLYANIVLSG 302

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            G+TMYPGIADRMQKEI  LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303  GSTMYPGIADRMQKEIMTLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GP IVHRKCF
Sbjct: 363  YDEAGPPIVHRKCF 376


>ref|NP_001003349.1| beta-actin-like [Canis lupus familiaris].
          Length = 375

 Score =  705 bits (1819), Expect = 0.0
 Identities = 351/375 (93%), Positives = 357/375 (95%)
 Frame = +2

Query: 98   MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            M++EIAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV MGQKDSYVGDEAQS
Sbjct: 1    MDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVRMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE PVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEAPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE+               ASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEEALLRRPGLRAGDGHGASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCP+ALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPKALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAP+ MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPARMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|XP_536888.2| PREDICTED: similar to cytoplasmic beta-actin isoform 1 [Canis
            familiaris].
          Length = 361

 Score =  700 bits (1807), Expect = 0.0
 Identities = 352/375 (93%), Positives = 356/375 (94%)
 Frame = +2

Query: 98   MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            M+++IAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQ               F P   GMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQ-----------SSFCFLP---GMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 286

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 287  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 346

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 347  EYDESGPSIVHRKCF 361


>ref|XP_536230.2| PREDICTED: similar to cytoplasmic beta-actin [Canis familiaris].
          Length = 389

 Score =  684 bits (1766), Expect = 0.0
 Identities = 339/343 (98%), Positives = 339/343 (98%)
 Frame = +2

Query: 194  SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 373
            SIVGRPRH GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN
Sbjct: 47   SIVGRPRHPGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 106

Query: 374  ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 553
            EL VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV
Sbjct: 107  ELGVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 166

Query: 554  MDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 733
            MDS DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT AEREIVRDI
Sbjct: 167  MDSSDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTIAEREIVRDI 226

Query: 734  KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESC 913
            KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESC
Sbjct: 227  KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESC 286

Query: 914  GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 1093
            GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP
Sbjct: 287  GIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 346

Query: 1094 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 1222
            PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 347  PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 389


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 67,902,672
Number of extensions: 1804896
Number of successful extensions: 7222
Number of sequences better than 1.0e-05: 56
Number of HSP's gapped: 7121
Number of HSP's successfully gapped: 59
Length of query: 635
Length of database: 18,874,504
Length adjustment: 109
Effective length of query: 526
Effective length of database: 15,240,880
Effective search space: 8016702880
Effective search space used: 8016702880
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000239
         (1907 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001186883.1| actin, cytoplasmic 2 [Homo sapiens].              758   0.0  
Alignment   gi|NP_001605.1| actin, cytoplasmic 2 [Homo sapiens].                 758   0.0  
Alignment   gi|NP_001092.1| actin, cytoplasmic 1 [Homo sapiens].                 754   0.0  
Alignment   gi|NP_001604.1| actin, aortic smooth muscle [Homo sapiens].          724   0.0  
Alignment   gi|NP_001135417.1| actin, aortic smooth muscle [Homo sapiens].       724   0.0  
Alignment   gi|NP_001606.1| actin, gamma-enteric smooth muscle isoform 1 pr...   724   0.0  
Alignment   gi|NP_005150.1| actin, alpha cardiac muscle 1 proprotein [Homo ...   723   0.0  
Alignment   gi|NP_001091.1| actin, alpha skeletal muscle [Homo sapiens].         721   0.0  
Alignment   gi|NP_001017992.1| beta-actin-like protein 2 [Homo sapiens].         710   0.0  
Alignment   gi|NP_001077007.1| POTE ankyrin domain family member E [Homo sa...   699   0.0  

>ref|NP_001186883.1| actin, cytoplasmic 2 [Homo sapiens].
          Length = 375

 Score =  758 bits (1957), Expect = 0.0
 Identities = 375/375 (100%), Positives = 375/375 (100%)
 Frame = +2

Query: 98   MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|NP_001605.1| actin, cytoplasmic 2 [Homo sapiens].
          Length = 375

 Score =  758 bits (1957), Expect = 0.0
 Identities = 375/375 (100%), Positives = 375/375 (100%)
 Frame = +2

Query: 98   MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|NP_001092.1| actin, cytoplasmic 1 [Homo sapiens].
          Length = 375

 Score =  754 bits (1947), Expect = 0.0
 Identities = 371/375 (98%), Positives = 375/375 (100%)
 Frame = +2

Query: 98   MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            M+++IAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|NP_001604.1| actin, aortic smooth muscle [Homo sapiens].
          Length = 377

 Score =  724 bits (1870), Expect = 0.0
 Identities = 353/374 (94%), Positives = 363/374 (97%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            EE+  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_001135417.1| actin, aortic smooth muscle [Homo sapiens].
          Length = 377

 Score =  724 bits (1870), Expect = 0.0
 Identities = 353/374 (94%), Positives = 363/374 (97%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            EE+  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_001606.1| actin, gamma-enteric smooth muscle isoform 1 precursor [Homo
            sapiens].
          Length = 376

 Score =  724 bits (1868), Expect = 0.0
 Identities = 353/374 (94%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            EEE  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3    EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 63   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 122

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 123  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 182

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 183  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 242

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 243  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 302

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK E
Sbjct: 303  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPE 362

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 363  YDEAGPSIVHRKCF 376


>ref|NP_005150.1| actin, alpha cardiac muscle 1 proprotein [Homo sapiens].
          Length = 377

 Score =  723 bits (1865), Expect = 0.0
 Identities = 353/374 (94%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            +EE  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    DEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_001091.1| actin, alpha skeletal muscle [Homo sapiens].
          Length = 377

 Score =  721 bits (1860), Expect = 0.0
 Identities = 351/374 (93%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            E+E  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN V+SG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_001017992.1| beta-actin-like protein 2 [Homo sapiens].
          Length = 376

 Score =  710 bits (1832), Expect = 0.0
 Identities = 342/374 (91%), Positives = 361/374 (96%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            + E++ALV+DNGSGMCKAGF GDDAPRAVFPS++GRPRHQGVMVGMGQKD YVGDEAQSK
Sbjct: 3    DNELSALVVDNGSGMCKAGFGGDDAPRAVFPSMIGRPRHQGVMVGMGQKDCYVGDEAQSK 62

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RG+LTLKYPIEHG+VTNWDDMEKIW+HTFYNELRVAP+EHP+LLTEAPLNPK NREKMTQ
Sbjct: 63   RGVLTLKYPIEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINREKMTQ 122

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFE FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTH VPIYEGYALPHAILRLDLA
Sbjct: 123  IMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHIVPIYEGYALPHAILRLDLA 182

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGY+FTTTAEREIVRD+KEKLCYVALDFEQEM  AA+SSS E+SYE
Sbjct: 183  GRDLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVRAAASSSPERSYE 242

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPEA+FQPSFLG+ES GIHETTFNSIMKCDVDIRKDLYANTVLSG
Sbjct: 243  LPDGQVITIGNERFRCPEAIFQPSFLGIESSGIHETTFNSIMKCDVDIRKDLYANTVLSG 302

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            G+TMYPGIADRMQKEI  LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 303  GSTMYPGIADRMQKEIITLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GP IVHRKCF
Sbjct: 363  YDEAGPPIVHRKCF 376


>ref|NP_001077007.1| POTE ankyrin domain family member E [Homo sapiens].
          Length = 1075

 Score =  699 bits (1805), Expect = 0.0
 Identities = 343/377 (90%), Positives = 357/377 (94%)
 Frame = +2

Query: 92   IAMEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 271
            + M+++ A LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPR QG+M GM QK+SYVG EA
Sbjct: 699  LTMDDDTAVLVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRQQGMMGGMHQKESYVGKEA 758

Query: 272  QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 451
            QSKRGILTLKYP+EHGI+TNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 759  QSKRGILTLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 818

Query: 452  MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRL 631
            MTQIMFETFNTPAMYVAIQAV SLY SGRTTGIVMDSGDGVTHTVPIYEG ALPHA LRL
Sbjct: 819  MTQIMFETFNTPAMYVAIQAVPSLYTSGRTTGIVMDSGDGVTHTVPIYEGNALPHATLRL 878

Query: 632  DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 811
            DLAGR+L DYLMKILTERGY FTT AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK
Sbjct: 879  DLAGRELPDYLMKILTERGYRFTTMAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 938

Query: 812  SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTV 991
            SYELPDGQVITIGNERFRCPEALFQP FLGMESCGIHETTFNSIMK DVDIRKDLY NTV
Sbjct: 939  SYELPDGQVITIGNERFRCPEALFQPCFLGMESCGIHETTFNSIMKSDVDIRKDLYTNTV 998

Query: 992  LSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 1171
            LSGGTTMYPG+A RMQKEI ALAPS MKI+IIAPP+RKYSVW+GGSILASLSTFQQMWIS
Sbjct: 999  LSGGTTMYPGMAHRMQKEIAALAPSMMKIRIIAPPKRKYSVWVGGSILASLSTFQQMWIS 1058

Query: 1172 KQEYDESGPSIVHRKCF 1222
            KQEYDESGPSIVHRKCF
Sbjct: 1059 KQEYDESGPSIVHRKCF 1075


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 66,416,388
Number of extensions: 1765744
Number of successful extensions: 6938
Number of sequences better than 1.0e-05: 38
Number of HSP's gapped: 6838
Number of HSP's successfully gapped: 40
Length of query: 635
Length of database: 18,297,164
Length adjustment: 109
Effective length of query: 526
Effective length of database: 14,704,088
Effective search space: 7734350288
Effective search space used: 7734350288
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000239
         (1907 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_033739.1| actin, cytoplasmic 2 [Mus musculus].                 758   0.0  
Alignment   gi|NP_031419.1| actin, cytoplasmic 1 [Mus musculus].                 754   0.0  
Alignment   gi|XP_003084637.1| PREDICTED: actin, cytoplasmic 2-like [Mus mu...   740   0.0  
Alignment   gi|NP_031418.1| actin, aortic smooth muscle [Mus musculus].          724   0.0  
Alignment   gi|NP_033740.2| actin, gamma-enteric smooth muscle [Mus musculu...   724   0.0  
Alignment   gi|NP_033738.1| actin, alpha cardiac muscle 1 [Mus musculus].        723   0.0  
Alignment   gi|NP_033736.1| actin, alpha skeletal muscle [Mus musculus].         721   0.0  
Alignment   gi|NP_780706.1| beta-actin-like protein 2 [Mus musculus].            717   0.0  
Alignment   gi|NP_666219.1| beta-centractin [Mus musculus].                      430   e-120
Alignment   gi|NP_058556.1| alpha-centractin [Mus musculus].                     425   e-119

>ref|NP_033739.1| actin, cytoplasmic 2 [Mus musculus].
          Length = 375

 Score =  758 bits (1957), Expect = 0.0
 Identities = 375/375 (100%), Positives = 375/375 (100%)
 Frame = +2

Query: 98   MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|NP_031419.1| actin, cytoplasmic 1 [Mus musculus].
          Length = 375

 Score =  754 bits (1947), Expect = 0.0
 Identities = 371/375 (98%), Positives = 375/375 (100%)
 Frame = +2

Query: 98   MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            M+++IAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|XP_003084637.1| PREDICTED: actin, cytoplasmic 2-like [Mus musculus].
          Length = 389

 Score =  740 bits (1911), Expect = 0.0
 Identities = 374/391 (95%), Positives = 376/391 (96%), Gaps = 2/391 (0%)
 Frame = +2

Query: 98   MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDE--SGPSIVHRKCF*TDCEQMRSICCMS 1264
            EYDE  + PS        T  EQ+  ICCMS
Sbjct: 361  EYDEXQAPPSSTANASRWT--EQVPGICCMS 389


>ref|NP_031418.1| actin, aortic smooth muscle [Mus musculus].
          Length = 377

 Score =  724 bits (1870), Expect = 0.0
 Identities = 353/374 (94%), Positives = 363/374 (97%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            EE+  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_033740.2| actin, gamma-enteric smooth muscle [Mus musculus].
          Length = 376

 Score =  724 bits (1868), Expect = 0.0
 Identities = 353/374 (94%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            EEE  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3    EEETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 63   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 122

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 123  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 182

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 183  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 242

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 243  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 302

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK E
Sbjct: 303  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPE 362

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 363  YDEAGPSIVHRKCF 376


>ref|NP_033738.1| actin, alpha cardiac muscle 1 [Mus musculus].
          Length = 377

 Score =  723 bits (1865), Expect = 0.0
 Identities = 353/374 (94%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            +EE  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    DEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_033736.1| actin, alpha skeletal muscle [Mus musculus].
          Length = 377

 Score =  721 bits (1860), Expect = 0.0
 Identities = 351/374 (93%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            E+E  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN V+SG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_780706.1| beta-actin-like protein 2 [Mus musculus].
          Length = 376

 Score =  717 bits (1850), Expect = 0.0
 Identities = 346/375 (92%), Positives = 365/375 (97%)
 Frame = +2

Query: 98   MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            +++E+ ALV+DNGSGMCKAGF GDDAPRAVFPS+VGRPRHQGVMVGMGQKD YVGDEAQS
Sbjct: 2    VDDELTALVVDNGSGMCKAGFGGDDAPRAVFPSMVGRPRHQGVMVGMGQKDCYVGDEAQS 61

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHG+VTNWDDMEKIW+HTFYNELRVAP+EHP+LLTEAPLNPK NREKMT
Sbjct: 62   KRGILTLKYPIEHGVVTNWDDMEKIWYHTFYNELRVAPDEHPILLTEAPLNPKINREKMT 121

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFE FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 122  QIMFEAFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 181

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGY+FTTTAEREIVRD+KEKLCYVALDFEQEM TAA+SSSLE+SY
Sbjct: 182  AGRDLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVTAAASSSLERSY 241

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEA+FQPSFLG+ES GIHETTFNSIMKCDVDIRKDL+ANTVLS
Sbjct: 242  ELPDGQVITIGNERFRCPEAIFQPSFLGIESRGIHETTFNSIMKCDVDIRKDLFANTVLS 301

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GG+TMYPGIADRMQKEI  LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 302  GGSTMYPGIADRMQKEIVTLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDE+GP IVHRKCF
Sbjct: 362  EYDEAGPPIVHRKCF 376


>ref|NP_666219.1| beta-centractin [Mus musculus].
          Length = 376

 Score =  430 bits (1105), Expect = e-120
 Identities = 200/369 (54%), Positives = 276/369 (74%), Gaps = 1/369 (0%)
 Frame = +2

Query: 119  LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 298
            +VIDNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+LT+
Sbjct: 12   VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEHRGLLTI 71

Query: 299  KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 475
            +YP+EHG+V +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP  NREK  ++ FET
Sbjct: 72   RYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKNREKAAEVFFET 131

Query: 476  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 655
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 132  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDIAGRDVS 191

Query: 656  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 835
             YL  +L + G  F T+AE E+VR IKE+ CY++++ +++ A        +  Y LPDG 
Sbjct: 192  RYLRLLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKDEALETE----KVQYTLPDGS 247

Query: 836  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 1015
             + +G  RFR PE LFQP  +G ES G+HE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 248  TLDVGPARFRAPELLFQPDLVGDESEGLHEVLAFAIHKSDMDLRRTLFSNIVLSGGSTLF 307

Query: 1016 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 1195
             G  DR+  E+  LAP  +KIKI AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 308  KGFGDRLLSEVKKLAPKDVKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 367

Query: 1196 PSIVHRKCF 1222
               +HRK F
Sbjct: 368  SRAIHRKTF 376


>ref|NP_058556.1| alpha-centractin [Mus musculus].
          Length = 376

 Score =  425 bits (1092), Expect = e-119
 Identities = 197/369 (53%), Positives = 276/369 (74%), Gaps = 1/369 (0%)
 Frame = +2

Query: 119  LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 298
            +VIDNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 12   VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 71

Query: 299  KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 475
            +YP+EHGIV +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP+ NRE+  ++ FET
Sbjct: 72   RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 131

Query: 476  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 655
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 132  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 191

Query: 656  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 835
             +L   L + GY F +++E EIV+ IKE+ CY++++ +++       +     Y LPDG 
Sbjct: 192  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 247

Query: 836  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 1015
             I IG  RFR PE LF+P  +G ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 248  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 307

Query: 1016 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 1195
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 308  KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 367

Query: 1196 PSIVHRKCF 1222
               +HRK F
Sbjct: 368  ARSIHRKTF 376


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 56,205,828
Number of extensions: 1474508
Number of successful extensions: 5689
Number of sequences better than 1.0e-05: 30
Number of HSP's gapped: 5591
Number of HSP's successfully gapped: 31
Length of query: 635
Length of database: 15,617,559
Length adjustment: 108
Effective length of query: 527
Effective length of database: 12,373,671
Effective search space: 6520924617
Effective search space used: 6520924617
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000239
         (1907 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003357976.1| PREDICTED: actin, cytoplasmic 2 [Sus scrofa].     758   0.0  
Alignment   gi|XP_003124328.1| PREDICTED: actin, cytoplasmic 1 [Sus scrofa].     754   0.0  
Alignment   gi|NP_001158122.1| actin, aortic smooth muscle [Sus scrofa].         724   0.0  
Alignment   gi|NP_001163988.1| actin, alpha cardiac muscle 1 [Sus scrofa].       723   0.0  
Alignment   gi|NP_001161267.1| actin, alpha skeletal muscle [Sus scrofa].        721   0.0  
Alignment   gi|XP_003121682.1| PREDICTED: actin, alpha cardiac muscle 1-lik...   721   0.0  
Alignment   gi|XP_003353462.1| PREDICTED: actin, alpha cardiac muscle 1-lik...   612   e-175
Alignment   gi|XP_003354819.1| PREDICTED: actin, gamma-enteric smooth muscl...   472   e-133
Alignment   gi|XP_003125076.2| PREDICTED: actin, gamma-enteric smooth muscl...   433   e-121
Alignment   gi|XP_001928912.1| PREDICTED: alpha-centractin [Sus scrofa].         425   e-119

>ref|XP_003357976.1| PREDICTED: actin, cytoplasmic 2 [Sus scrofa].
          Length = 375

 Score =  758 bits (1957), Expect = 0.0
 Identities = 375/375 (100%), Positives = 375/375 (100%)
 Frame = +2

Query: 98   MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|XP_003124328.1| PREDICTED: actin, cytoplasmic 1 [Sus scrofa].
          Length = 375

 Score =  754 bits (1947), Expect = 0.0
 Identities = 371/375 (98%), Positives = 375/375 (100%)
 Frame = +2

Query: 98   MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 277
            M+++IAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 1    MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 278  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 457
            KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61   KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120

Query: 458  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 637
            QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 121  QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180

Query: 638  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 817
            AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
Sbjct: 181  AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY 240

Query: 818  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 997
            ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
Sbjct: 241  ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS 300

Query: 998  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 1177
            GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360

Query: 1178 EYDESGPSIVHRKCF 1222
            EYDESGPSIVHRKCF
Sbjct: 361  EYDESGPSIVHRKCF 375


>ref|NP_001158122.1| actin, aortic smooth muscle [Sus scrofa].
          Length = 377

 Score =  724 bits (1870), Expect = 0.0
 Identities = 353/374 (94%), Positives = 363/374 (97%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            EE+  ALV DNGSG+CKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_001163988.1| actin, alpha cardiac muscle 1 [Sus scrofa].
          Length = 377

 Score =  723 bits (1865), Expect = 0.0
 Identities = 353/374 (94%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            +EE  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    DEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|NP_001161267.1| actin, alpha skeletal muscle [Sus scrofa].
          Length = 377

 Score =  721 bits (1860), Expect = 0.0
 Identities = 351/374 (93%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            E+E  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN V+SG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|XP_003121682.1| PREDICTED: actin, alpha cardiac muscle 1-like isoform 1 [Sus scrofa].
          Length = 377

 Score =  721 bits (1860), Expect = 0.0
 Identities = 352/374 (94%), Positives = 362/374 (96%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            +EE  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 4    DEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 63

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
            RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 64   RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 123

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 124  IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 183

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLC+VALDFE EMATAASSSSLEKSYE
Sbjct: 184  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCHVALDFENEMATAASSSSLEKSYE 243

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 244  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 303

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 304  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 363

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 364  YDEAGPSIVHRKCF 377


>ref|XP_003353462.1| PREDICTED: actin, alpha cardiac muscle 1-like isoform 2 [Sus scrofa].
          Length = 334

 Score =  612 bits (1578), Expect = e-175
 Identities = 310/374 (82%), Positives = 319/374 (85%)
 Frame = +2

Query: 101  EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 280
            +EE  ALV DNGSG+ KAGFAGDDAPRAVFPSIVGRPRHQ                    
Sbjct: 4    DEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQ-------------------- 43

Query: 281  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 460
                                   IWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQ
Sbjct: 44   -----------------------IWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQ 80

Query: 461  IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 640
            IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLA
Sbjct: 81   IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLA 140

Query: 641  GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 820
            GRDLTDYLMKILTERGYSF TTAEREIVRDIKEKLC+VALDFE EMATAASSSSLEKSYE
Sbjct: 141  GRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCHVALDFENEMATAASSSSLEKSYE 200

Query: 821  LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSG 1000
            LPDGQVITIGNERFRCPE LFQPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSG
Sbjct: 201  LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 260

Query: 1001 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 1180
            GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE
Sbjct: 261  GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 320

Query: 1181 YDESGPSIVHRKCF 1222
            YDE+GPSIVHRKCF
Sbjct: 321  YDEAGPSIVHRKCF 334


>ref|XP_003354819.1| PREDICTED: actin, gamma-enteric smooth muscle-like [Sus scrofa].
          Length = 313

 Score =  472 bits (1215), Expect = e-133
 Identities = 231/247 (93%), Positives = 239/247 (96%)
 Frame = +2

Query: 344  EKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSL 523
            E+IWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSL
Sbjct: 36   EQIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSL 95

Query: 524  YASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 703
            YASGRTTGIV+DSGDGVTH VPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSF T
Sbjct: 96   YASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVT 155

Query: 704  TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 883
            TAEREIVRDIKEKLCYVALDFE EMATAASSSSLEKSYELPDGQVITIGNERFRCPE LF
Sbjct: 156  TAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLF 215

Query: 884  QPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 1063
            QPSF+GMES GIHETT+NSIMKCD+DIRKDLYAN VLSGGTTMYPGIADRMQKEITALAP
Sbjct: 216  QPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAP 275

Query: 1064 STMKIKI 1084
            STMKIK+
Sbjct: 276  STMKIKV 282


>ref|XP_003125076.2| PREDICTED: actin, gamma-enteric smooth muscle-like [Sus scrofa].
          Length = 268

 Score =  433 bits (1113), Expect = e-121
 Identities = 212/225 (94%), Positives = 218/225 (96%)
 Frame = +2

Query: 548  IVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 727
            IV+DSGDGVTH VPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSF TTAEREIVR
Sbjct: 44   IVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVR 103

Query: 728  DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 907
            DIKEKLCYVALDFE EMATAASSSSLEKSYELPDGQVITIGNERFRCPE LFQPSF+GME
Sbjct: 104  DIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGME 163

Query: 908  SCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 1087
            S GIHETT+NSIMKCD+DIRKDLYAN VLSGGTTMYPGIADRMQKEITALAPSTMKIKII
Sbjct: 164  SAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 223

Query: 1088 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 1222
            APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPSIVHRKCF
Sbjct: 224  APPERKYSVWIGGSILASLSTFQQMWISKPEYDEAGPSIVHRKCF 268


>ref|XP_001928912.1| PREDICTED: alpha-centractin [Sus scrofa].
          Length = 376

 Score =  425 bits (1092), Expect = e-119
 Identities = 197/369 (53%), Positives = 276/369 (74%), Gaps = 1/369 (0%)
 Frame = +2

Query: 119  LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 298
            +VIDNGSG+ KAGFAGD  P+  FP+ VGRP+H  VM G  + D ++G +A+  RG+L++
Sbjct: 12   VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEEHRGLLSI 71

Query: 299  KYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 475
            +YP+EHGIV +W+DME+IW + +  ++L+   EEHPVLLTEAPLNP+ NRE+  ++ FET
Sbjct: 72   RYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNRERAAEVFFET 131

Query: 476  FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 655
            FN PA+++++QAVLSLYA+GRTTG+V+DSGDGVTH VPIYEG+A+PH+I+R+D+AGRD++
Sbjct: 132  FNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIAGRDVS 191

Query: 656  DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 835
             +L   L + GY F +++E EIV+ IKE+ CY++++ +++       +     Y LPDG 
Sbjct: 192  RFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKA----QYYLPDGS 247

Query: 836  VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 1015
             I IG  RFR PE LF+P  +G ES GIHE    +I K D+D+R+ L++N VLSGG+T++
Sbjct: 248  TIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLF 307

Query: 1016 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 1195
             G  DR+  E+  LAP  +KI+I AP ER YS WIGGSILASL TF++MW+SK+EY+E G
Sbjct: 308  KGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDG 367

Query: 1196 PSIVHRKCF 1222
               +HRK F
Sbjct: 368  ARSIHRKTF 376


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 41,729,952
Number of extensions: 1114911
Number of successful extensions: 4580
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 4517
Number of HSP's successfully gapped: 32
Length of query: 635
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 530
Effective length of database: 8,729,747
Effective search space: 4626765910
Effective search space used: 4626765910
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000239
         (1907 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr12                                                        1405   0.0  
Sscrofa_Chr13                                                         955   0.0  
Sscrofa_Chr03                                                         775   0.0  
Sscrofa_Chr16                                                         565   e-158
Sscrofa_Chr01                                                         486   e-134
Sscrofa_Chr14                                                         416   e-113
Sscrofa_Chr10                                                         238   9e-60
gb|GL894474.1| Sus scrofa unplaced genomic scaffold chrU_scaffol...    80   5e-12

>Sscrofa_Chr12 
||          Length = 63588571

 Score = 1405 bits (709), Expect = 0.0
 Identities = 800/829 (96%), Gaps = 1/829 (0%)
 Strand = Plus / Plus

                                                                           
Query: 1080    agatcatcgcgcctcccgagcgcaagtactcggtgtggatcgggggctccatcctggcct 1139
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165151 agatcatcgcgcctcccgagcgcaagtactcggtgtggatcgggggctccatcctggcct 1165210

                                                                           
Query: 1140    cgctgtccaccttccagcagatgtggatcagcaagcaggagtacgacgagtcgggcccgt 1199
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165211 cgctgtccaccttccagcagatgtggatcagcaagcaggagtacgacgagtcgggcccgt 1165270

                                                                           
Query: 1200    ccatcgtccaccgcaaatgcttctagacggactgcgagcagatgcgtagcatttgctgca 1259
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165271 ccatcgtccaccgcaaatgcttctagacggactgcgagcagatgcgtagcatttgctgca 1165330

                                                                           
Query: 1260    tgagctaatccagaaataaagtttgccctggcaaatgtacacacctcatgccagcctcct 1319
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165331 tgagctaatccagaaataaagtttgccctggcaaatgtacacacctcatgccagcctcct 1165390

                                                                           
Query: 1320    gaaactggaataagcctttgaaaagaaatttgtccttgaagcttgtatctggtatcagca 1379
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165391 gaaactggaataagcctttgaaaagaaatttgtccttgaagcttgtatctggtatcagca 1165450

                                                                           
Query: 1380    ctggattgtagaccttgttgctgattttgaccttgtactcgagttaactcttcccttggt 1439
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165451 ctggattgtagaccttgttgctgattttgaccttgtactcgagttaactcttcccttggt 1165510

                                                                           
Query: 1440    ctctgtttaataccctgtgcatatctttgatttaaacccctagttacacacacgcggctc 1499
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165511 ctctgtttaataccctgtgcatatctttgatttaaacccctagttacacacacgcggctc 1165570

                                                                           
Query: 1500    tgtcacctcgtggctgaggtgagaacctgtttatcgtggaagagaaatccgttggctggt 1559
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165571 tgtcacctcgtggctgaggtgagaacctgtttatcgtggaagagaaatccgttggctggt 1165630

                                                                           
Query: 1560    tgagaatctgagacggagtctctccgatctgtgcagggtattcatgtgtccgagctccta 1619
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165631 tgagaatctgagacggagtctctccgatctgtgcagggtattcatgtgtccgagctccta 1165690

                                                                           
Query: 1620    ttccaggatttctctcgaggctgggcagagtcctgaaccagttgtcatttctgtcttgcc 1679
               ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 1165691 ttccaggatttctctcgaggctggcaagagtcctgaaccagttgtcatttctgtcttgcc 1165750

                                                                           
Query: 1680    ggtctgacggggttgggaaggtccgagccttgagacccactgtcctttcttccccgatgt 1739
               |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 1165751 ggtctgacggggttgggaaggtccgagccttaggacccactgtcctttcttccccgatgt 1165810

                                                                           
Query: 1740    ttgcccgacaaaaaaccgaggagtgttaacttgctctgagttggaagcgattgcattcac 1799
               ||||||| || ||||||| ||  |||||||||||  ||||||||||||| ||||||||||
Sbjct: 1165811 ttgcccgccagaaaaccgtgggttgttaacttgccttgagttggaagcgtttgcattcac 1165870

                                                                           
Query: 1800    agctgtaaattaaatcatccttgt-agtcaggtacggttattgtacgccattctcagttc 1858
               | ||||||||| | |||||||| | | | | ||| |||| |||||||| ||||||| |||
Sbjct: 1165871 acctgtaaatttattcatccttttaatttatgtaaggtttttgtacgcaattctcaattc 1165930

                                                                
Query: 1859    cataatagacgaccaccgattttggttttctactgtcacgtgagaacgt 1907
               | ||| ||| ||| || ||||||||||||||||||||||||||||||||
Sbjct: 1165931 cttaagagatgacaacagattttggttttctactgtcacgtgagaacgt 1165979



 Score =  870 bits (439), Expect = 0.0
 Identities = 442/443 (99%)
 Strand = Plus / Plus

                                                                           
Query: 458     cagatcatgttcgagaccttcaacacgccggccatgtacgtggccatccaggccgtgctg 517
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164343 cagatcatgttcgagaccttcaacacgccggccatgtacgtggccatccaggccgtgctg 1164402

                                                                           
Query: 518     tccctgtacgcctctggccgcaccactggcattgtcatggactctggggatggggtcacc 577
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164403 tccctgtacgcctctggccgcaccactggcattgtcatggactctggggatggggtcacc 1164462

                                                                           
Query: 578     cacacggtgcccatctacgaggggtacgccctgccccacgccatcctgcgtctggacctg 637
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164463 cacacggtgcccatctacgaggggtacgccctgccccacgccatcctgcgtctggacctg 1164522

                                                                           
Query: 638     gctggccgggacctgaccgactacctcatgaagatcctcacggagcggggctacagcttc 697
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164523 gctggccgggacctgaccgactacctcatgaagatcctcacggagcggggctacagcttc 1164582

                                                                           
Query: 698     accaccacggccgagcgggagatcgtgcgggacatcaaggagaagctctgctacgtcgcc 757
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164583 accaccacggccgagcgggagatcgtgcgggacatcaaggagaagctctgctacgtcgcc 1164642

                                                                           
Query: 758     ctggacttcgagcaggagatggccaccgccgcgtcctcctcctccctggagaagagctac 817
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164643 ctggacttcgagcaggagatggccaccgccgcgtcctcctcctccctggagaagagctac 1164702

                                                                           
Query: 818     gagctgcccgacggccaggtcatcaccatcggcaacgagcgcttccggtgtccagaggcg 877
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164703 gagctgcccgacggccaggtcatcaccatcggcaacgagcgcttccggtgtccagaggcg 1164762

                                      
Query: 878     ctcttccagccctccttcctggg 900
               |||||||||||||||||| ||||
Sbjct: 1164763 ctcttccagccctccttcttggg 1164785



 Score =  720 bits (363), Expect = 0.0
 Identities = 363/363 (100%)
 Strand = Plus / Plus

                                                                           
Query: 98      atggaagaagagatcgccgcgctggtcatcgacaatggctccggcatgtgcaaagctggc 157
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163693 atggaagaagagatcgccgcgctggtcatcgacaatggctccggcatgtgcaaagctggc 1163752

                                                                           
Query: 158     tttgctggggatgacgccccccgggccgtgttcccgtccatcgtcgggcgtccccgacac 217
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163753 tttgctggggatgacgccccccgggccgtgttcccgtccatcgtcgggcgtccccgacac 1163812

                                                                           
Query: 218     cagggtgtcatggtgggcatgggccagaaggacagctacgtgggcgacgaggctcagagc 277
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163813 cagggtgtcatggtgggcatgggccagaaggacagctacgtgggcgacgaggctcagagc 1163872

                                                                           
Query: 278     aagcggggcatcctgaccctcaagtaccccatcgaacacggcatcgtcaccaactgggac 337
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163873 aagcggggcatcctgaccctcaagtaccccatcgaacacggcatcgtcaccaactgggac 1163932

                                                                           
Query: 338     gacatggagaagatctggcatcacaccttctacaacgagctgcgcgtggcccccgaggag 397
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163933 gacatggagaagatctggcatcacaccttctacaacgagctgcgcgtggcccccgaggag 1163992

                                                                           
Query: 398     caccccgtgctgctcacggaggcccccctgaaccccaaggccaaccgtgagaagatgact 457
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163993 caccccgtgctgctcacggaggcccccctgaaccccaaggccaaccgtgagaagatgact 1164052

                  
Query: 458     cag 460
               |||
Sbjct: 1164053 cag 1164055



 Score =  363 bits (183), Expect = 2e-97
 Identities = 183/183 (100%)
 Strand = Plus / Plus

                                                                           
Query: 899     ggcatggagtcctgcggcatccacgagaccaccttcaactcgatcatgaagtgcgacgtg 958
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164879 ggcatggagtcctgcggcatccacgagaccaccttcaactcgatcatgaagtgcgacgtg 1164938

                                                                           
Query: 959     gacatcaggaaggacctctacgccaacacggtgctgtctggcgggaccaccatgtacccc 1018
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164939 gacatcaggaaggacctctacgccaacacggtgctgtctggcgggaccaccatgtacccc 1164998

                                                                           
Query: 1019    ggcatcgccgacaggatgcagaaggagatcacggccctggcgcccagcaccatgaagatc 1078
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1164999 ggcatcgccgacaggatgcagaaggagatcacggccctggcgcccagcaccatgaagatc 1165058

                  
Query: 1079    aag 1081
               |||
Sbjct: 1165059 aag 1165061


>Sscrofa_Chr13 
||          Length = 218635234

 Score =  955 bits (482), Expect = 0.0
 Identities = 1351/1632 (82%), Gaps = 39/1632 (2%)
 Strand = Plus / Minus

                                                                             
Query: 123       tcatcgacaatggctccggcatgtgcaaagctggctttgctggggatgacgccccccggg 182
                 ||||||||| || ||| ||||||||||| |||||||||||||||| |||||||||  |||
Sbjct: 154029254 tcatcgacagtgactctggcatgtgcaacgctggctttgctgggg-tgacgcccctgggg 154029196

                                                                             
Query: 183       ccgtgttcccgtccatcgtcgggcgtccccgacaccagggtgtcatggtgggcatgggcc 242
                 | |||||||| ||||||   |||| ||||||| |||||||  ||||||  |||||||| |
Sbjct: 154029195 ctgtgttcccatccatcactgggcatccccgaaaccagggcatcatgg--ggcatggggc 154029138

                                                                             
Query: 243       agaaggacagctacgtgggcgacgaggctcagagcaagcggggcatcctgaccctcaagt 302
                 ||||||||||||| |||   ||| |||| |||| ||| |  |||||||||||||||||||
Sbjct: 154029137 agaaggacagctatgtgcatgacaaggcccagaacaatcatggcatcctgaccctcaagt 154029078

                                                                             
Query: 303       accccatcgaacacggcatcgtcaccaactgggacgacatggagaagatctggcatcaca 362
                 || |||  || | | |||| |||||||||||||| |||||||||||||||||||| ||||
Sbjct: 154029077 actccactgagcccagcattgtcaccaactgggatgacatggagaagatctggcaccaca 154029018

                                                                             
Query: 363       ccttctacaacgagctgcgcgtggcccccgaggagcaccccgtgctgctcacggaggccc 422
                 |||   |||| |||||||| |||||||| ||||||||||  |||||    ||  ||||||
Sbjct: 154029017 cct---acaatgagctgcgtgtggcccctgaggagcaccttgtgctaacgacaaaggccc 154028961

                                                                             
Query: 423       ccctgaaccccaaggccaaccgtgagaagatgactcagatcatgttcgagaccttcaaca 482
                 || ||||| |||||| |||| |||||| ||| |||||| ||||||| ||||  |||||||
Sbjct: 154028960 cc-tgaactccaaggacaactgtgagacgataactcagttcatgttggagattttcaaca 154028902

                                                                             
Query: 483       cgccggccatgtacgtggccatccaggccgt-gctgtccctgtacgcctctggccgcacc 541
                 | || ||||| |  ||||||||||||||| | ||||||||||||| |||||||| |||| 
Sbjct: 154028901 ctccagccatatgtgtggccatccaggccattgctgtccctgtacacctctggctgcac- 154028843

                                                                             
Query: 542       actggcattgtcatggactctggggatggggtcacccacacggtgcccatctacgagggg 601
                   | ||| ||||||||||||||||||  |||| ||||||| |||||||||||| || |||
Sbjct: 154028842 --ttgcactgtcatggactctggggacagggttacccacatggtgcccatctatgaaggg 154028785

                                                                             
Query: 602       tacgccctgccccacgccatcctgcgtctggacctggctggccgggacctgaccgactac 661
                 || | |||| | || || ||||||| |||||||||||||||||| | ||||||| |||||
Sbjct: 154028784 tatggcctgtctcaggctatcctgcatctggacctggctggccgagtcctgacccactac 154028725

                                                                             
Query: 662       ctcatgaagatcctcacggagcggggctacagcttcaccaccacggccgagcgggagatc 721
                  |||| |||||||||| ||| |||||||  || ||||||||||| |  ||| ||||||||
Sbjct: 154028724 ttcataaagatcctcatggaccggggctgaaggttcaccaccacagaggagtgggagatc 154028665

                                                                             
Query: 722       gtgcgggacatcaaggagaagctctgctacgtcgccctggacttcgagcaggagatggcc 781
                  || | |||||||||||||| |||||||  ||| ||||||||||| |||||||||| |||
Sbjct: 154028664 atgggtgacatcaaggagaaactctgctgtgtcaccctggacttcaagcaggagatagcc 154028605

                                                                             
Query: 782       accgccgcgtcctcctcctccctggagaagagctacgagctgcccgacggccaggtcatc 841
                 ||| ||  ||||||||||||| ||||||| ||||||  ||| ||||| | |||||| |||
Sbjct: 154028604 accaccatgtcctcctcctccatggagaaaagctacaggcttcccgaagaccaggtgatc 154028545

                                                                             
Query: 842       accatcggcaacgagcgcttccggtgtccagaggcgctcttccagccctccttcctgggc 901
                 |||||  ||||| || | ||| ||||||||||   |||||||||| |||| |||||||| 
Sbjct: 154028544 accataagcaacaagtggttcaggtgtccagacatgctcttccagtcctctttcctgggt 154028485

                                                                             
Query: 902       atggagtcctgcggcatccacgagaccaccttcaactcgatcatgaagtgcgacgtggac 961
                 ||||||| ||| ||||||||| |||||||||||||||  ||||||||||| |||   |||
Sbjct: 154028484 atggagttctgtggcatccacaagaccaccttcaactgcatcatgaagtgtgacagcgac 154028425

                                                                             
Query: 962       atcaggaaggacctctacgccaacacggtgctgtctggcgggaccaccatgtaccccggc 1021
                 |||| ||||| ||| || |||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 154028424 atcaagaagggcctgtatgccaacacagtgctgtctggtgggaccaccatgtaccctggc 154028365

                                                                             
Query: 1022      atcgccgacaggatgcagaaggagatcacggccctggcgcccagcaccatgaagatcaag 1081
                 ||| || |||||| ||   |||||||||| || ||||  |||| ||  ||||||||||||
Sbjct: 154028364 atccccaacaggacgc---aggagatcacagctctggtccccaccatgatgaagatcaag 154028308

                                                                             
Query: 1082      atcatcgcgcctcccgagcgcaagtactcggtgtggatcgggggctccatcctggcctcg 1141
                 ||||| || |||||| || ||| |||||| | |||||||||||| |||| ||||||||| 
Sbjct: 154028307 atcatggctcctccctagtgcatgtactctgcgtggatcgggggttccaccctggcctca 154028248

                                                                             
Query: 1142      ctgtccaccttccagcagatgtggatcagcaagcaggagtacgacgagtcgggcccgtcc 1201
                 || ||  ||||||||||||||| ||||||| |||||||||  ||| | || |||| ||||
Sbjct: 154028247 ctatctgccttccagcagatgt-gatcagccagcaggagtgggacaattcaggccagtcc 154028189

                                                                             
Query: 1202      atcgtccaccgcaaatgcttctagacggactgc-----gagcagatgcgtagcatttgct 1256
                 ||| |||||| ||||| |||||| | |||||||     |||||||||| || || |  ||
Sbjct: 154028188 atcatccaccacaaatacttctaaaaggactgcaagctgagcagatgcctaacagtcact 154028129

                                                                             
Query: 1257      gcatgagctaatccagaaata-aagtttgccctggcaaatgtacacacctcatgccagcc 1315
                 ||||| | |||||||||| || || || ||||||||||||||||| ||||  ||||| ||
Sbjct: 154028128 gcatgggttaatccagaagtataaattagccctggcaaatgtacataccttgtgccatcc 154028069

                                                                             
Query: 1316      tcctgaaactggaataagcctttgaaaagaaatttgtccttgaagcttgtatctggtatc 1375
                 |||||||||| ||||||||| ||||||||||||||||||||||| ||| |||||| ||||
Sbjct: 154028068 tcctgaaactagaataagcccttgaaaagaaatttgtccttgaaacttatatctgatatc 154028009

                                                                             
Query: 1376      agcactggattgtag-accttgttgctgattttgaccttgtactcgagttaactcttccc 1434
                 ||||||||||||||| | ||| ||||||||||||||||||||  | ||||||||||||| 
Sbjct: 154028008 agcactggattgtagaatcttattgctgattttgaccttgtatgctagttaactcttcct 154027949

                                                                             
Query: 1435      ttggtctctgtttaataccctgtgcatatctttgatttaaacccctagttacacacacgc 1494
                 ||||| | | ||||||||||||||||||||||||||||||||   ||             
Sbjct: 154027948 ttggtatgtatttaataccctgtgcatatctttgatttaaacatata------------- 154027902

                                                                             
Query: 1495      ggctctgtcacctcgtggctgaggtgagaacctgtttatcgtggaagagaaatccgttgg 1554
                  |||||||||||| ||||||||||| ||||| ||||||   ||  |||||| ||| ||||
Sbjct: 154027901 -gctctgtcaccttgtggctgaggtaagaacatgttta---tgacagagaactccattgg 154027846

                                                                             
Query: 1555      ctggttgagaatctgagacggagtctctccgatctgtgcagggtattcatgtgtccgagc 1614
                 ||||||||||||| || || |||||| |||||||||||||||||||| |||  ||| | |
Sbjct: 154027845 ctggttgagaatccgaaactgagtctttccgatctgtgcagggtattaatgcttcccacc 154027786

                                                                             
Query: 1615      tcctattccaggatttctctcgaggctgggcagagtcctgaaccagttgtcatttctgtc 1674
                 |||||||||||  ||||||| |||||||| |||||||||||||||| |||||||||||||
Sbjct: 154027785 tcctattccagtgtttctctggaggctggccagagtcctgaaccaggtgtcatttctgtc 154027726

                                                                             
Query: 1675      ttgccggtctgacggggttgggaaggtccgagccttgagacccactgtcctttcttcccc 1734
                  ||| |||  || |||||||||||||||  || |||   ||||||| ||||||||| |||
Sbjct: 154027725 atgctggttggatggggttgggaaggtctaagtcttagaacccactttcctttcttaccc 154027666

                             
Query: 1735      gatgtttgcccg 1746
                  |||||| ||||
Sbjct: 154027665 aatgttttcccg 154027654



 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                           
Query: 1338    tgaaaagaaatttgtccttgaagcttgtatctggtatcagcactggattgtagaccttgt 1397
               |||||||||| |||||||||||| || |||||| |||||||||||||||||| | |||||
Sbjct: 6367991 tgaaaagaaacttgtccttgaagtttctatctgatatcagcactggattgtaaaacttgt 6367932

                               
Query: 1398    tgctgattttgacctt 1413
               ||||| ||||||||||
Sbjct: 6367931 tgctggttttgacctt 6367916



 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                           
Query: 1338    tgaaaagaaatttgtccttgaagcttgtatctggtatcagcactggattgtagaccttgt 1397
               |||||||||| |||||||||||| || |||||| |||||||||||||||||| | |||||
Sbjct: 6497644 tgaaaagaaacttgtccttgaagtttctatctgatatcagcactggattgtaaaacttgt 6497703

                               
Query: 1398    tgctgattttgacctt 1413
               ||||| ||||||||||
Sbjct: 6497704 tgctggttttgacctt 6497719



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 201/251 (80%), Gaps = 3/251 (1%)
 Strand = Plus / Minus

                                                                           
Query: 1100    cgcaagtactcggtgtggatcgggggctccatcctggcctcgctgtccaccttccagcag 1159
               |||||||||| || ||||||| ||| ||||||||||||||| |||||||| |||||||  
Sbjct: 6368287 cgcaagtacttggggtggatcaggg-ctccatcctggcctctctgtccactttccagcca 6368229

                                                                           
Query: 1160    atgtggatcagcaagcaggagtacgacgagtcgggcccgtccatcgtccaccgcaaatgc 1219
                 |  ||||   || |||||||| ||| ||| |||||| |||| | || |||||| ||||
Sbjct: 6368228 gcggagatcgttaatcaggagtatgacaagttgggcccctccagcctcaaccgcacatgc 6368169

                                                                           
Query: 1220    ttctagacggactgcgagcagatgcgtagcatttgctgcatgagctaatccagaaata-a 1278
               ||||| || |||||| ||||||||| ||||| ||| || ||||  | || || || || |
Sbjct: 6368168 ttctaaactgactgccagcagatgcatagcacttgatgtatgaattcattcaaaagtata 6368109

                                                                           
Query: 1279    agtttgccctggcaaatgtacacacctcatg-ccagcctcctgaaactggaataagcctt 1337
               | |||||||||| ||| || ||||||||| |   | |||| ||||||| ||||||||| |
Sbjct: 6368108 aatttgccctggaaaaagtgcacacctcaagtgtaacctcatgaaactagaataagccat 6368049

                          
Query: 1338    tgaaaagaaat 1348
               |||||||||||
Sbjct: 6368048 tgaaaagaaat 6368038


>Sscrofa_Chr03 
||          Length = 144787322

 Score =  775 bits (391), Expect = 0.0
 Identities = 430/443 (97%)
 Strand = Plus / Minus

                                                                           
Query: 458     cagatcatgttcgagaccttcaacacgccggccatgtacgtggccatccaggccgtgctg 517
               |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 4730915 cagatcatgttcgagaccttcaacaccccagccatgtacgtggccatccaggccgtgctg 4730856

                                                                           
Query: 518     tccctgtacgcctctggccgcaccactggcattgtcatggactctggggatggggtcacc 577
               |||||||||||||||||||||||||||||||| || |||||||| || || |||||||||
Sbjct: 4730855 tccctgtacgcctctggccgcaccactggcatcgtgatggactccggagacggggtcacc 4730796

                                                                           
Query: 578     cacacggtgcccatctacgaggggtacgccctgccccacgccatcctgcgtctggacctg 637
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4730795 cacacggtgcccatctacgaggggtacgccctgccccacgccatcctgcgtctggacctg 4730736

                                                                           
Query: 638     gctggccgggacctgaccgactacctcatgaagatcctcacggagcggggctacagcttc 697
               |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4730735 gctggccgggacctgaccgactacctcatgaagatcctgacggagcggggctacagcttc 4730676

                                                                           
Query: 698     accaccacggccgagcgggagatcgtgcgggacatcaaggagaagctctgctacgtcgcc 757
               ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4730675 accaccacggccgagcgggagatcgtgcgggacatcaaggagaagctgtgctacgtcgcc 4730616

                                                                           
Query: 758     ctggacttcgagcaggagatggccaccgccgcgtcctcctcctccctggagaagagctac 817
               |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4730615 ctggacttcgagcaggagatggccactgccgcgtcctcctcctccctggagaagagctac 4730556

                                                                           
Query: 818     gagctgcccgacggccaggtcatcaccatcggcaacgagcgcttccggtgtccagaggcg 877
               ||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||
Sbjct: 4730555 gagctgcccgacggccaggtcatcaccatcggcaacgagcgcttccgctgccccgaggcg 4730496

                                      
Query: 878     ctcttccagccctccttcctggg 900
               |||||||||||||||||||||||
Sbjct: 4730495 ctcttccagccctccttcctggg 4730473



 Score =  363 bits (183), Expect = 2e-97
 Identities = 225/239 (94%)
 Strand = Plus / Minus

                                                                           
Query: 218     cagggtgtcatggtgggcatgggccagaaggacagctacgtgggcgacgaggctcagagc 277
               ||||| || ||||||||||||||||||||||||  ||||||||| |||||||| ||||||
Sbjct: 4731602 cagggcgtgatggtgggcatgggccagaaggactcctacgtgggggacgaggcccagagc 4731543

                                                                           
Query: 278     aagcggggcatcctgaccctcaagtaccccatcgaacacggcatcgtcaccaactgggac 337
               ||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4731542 aagagaggcatcctgaccctcaagtaccccatcgagcacggcatcgtcaccaactgggac 4731483

                                                                           
Query: 338     gacatggagaagatctggcatcacaccttctacaacgagctgcgcgtggcccccgaggag 397
               |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 4731482 gacatggagaagatctggcaccacaccttctacaacgagctgcgtgtggcccccgaggag 4731423

                                                                          
Query: 398     caccccgtgctgctcacggaggcccccctgaaccccaaggccaaccgtgagaagatgac 456
               |||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4731422 caccccgtgctgctgaccgaggcccccctgaaccccaaagccaaccgtgagaagatgac 4731364



 Score =  268 bits (135), Expect = 1e-68
 Identities = 171/183 (93%)
 Strand = Plus / Minus

                                                                           
Query: 899     ggcatggagtcctgcggcatccacgagaccaccttcaactcgatcatgaagtgcgacgtg 958
               |||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||| 
Sbjct: 4730376 ggcatggaatcctgcggcatccacgaaactaccttcaactccatcatgaagtgcgacgtc 4730317

                                                                           
Query: 959     gacatcaggaaggacctctacgccaacacggtgctgtctggcgggaccaccatgtacccc 1018
               |||||| | ||||||||||||||||||||||||||||| || || |||||||||||||| 
Sbjct: 4730316 gacatccgcaaggacctctacgccaacacggtgctgtcgggtggcaccaccatgtaccca 4730257

                                                                           
Query: 1019    ggcatcgccgacaggatgcagaaggagatcacggccctggcgcccagcaccatgaagatc 1078
               |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4730256 ggcatcgccgacaggatgcagaaggagatcacggccctggcgcccagcacgatgaagatc 4730197

                  
Query: 1079    aag 1081
               |||
Sbjct: 4730196 aag 4730194



 Score =  258 bits (130), Expect = 1e-65
 Identities = 148/154 (96%)
 Strand = Plus / Minus

                                                                           
Query: 1080    agatcatcgcgcctcccgagcgcaagtactcggtgtggatcgggggctccatcctggcct 1139
               |||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 4730065 agatcatcgcgcctccagagcgcaagtactccgtgtggatcggcggctccatcctggcct 4730006

                                                                           
Query: 1140    cgctgtccaccttccagcagatgtggatcagcaagcaggagtacgacgagtcgggcccgt 1199
               |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 4730005 cgctgtccaccttccagcagatgtggatcagcaagcaggagtacgacgagtccggcccct 4729946

                                                 
Query: 1200    ccatcgtccaccgcaaatgcttctagacggactg 1233
               |||||||||||||||||||||||||| |||||||
Sbjct: 4729945 ccatcgtccaccgcaaatgcttctaggcggactg 4729912



 Score =  192 bits (97), Expect = 5e-46
 Identities = 157/177 (88%)
 Strand = Plus / Minus

                                                                            
Query: 719      atcgtgcgggacatcaaggagaagctctgctacgtcgccctggacttcgagcaggagatg 778
                |||||||| ||||||||||||||||| ||||| || ||||||||||| ||| | ||||||
Sbjct: 72256562 atcgtgcgagacatcaaggagaagctgtgctatgtggccctggactttgagaacgagatg 72256503

                                                                            
Query: 779      gccaccgccgcgtcctcctcctccctggagaagagctacgagctgcccgacggccaggtc 838
                ||||| || || ||||| |||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 72256502 gccacggcagcctcctcttcctccctggagaagagctatgagctgccggacggacaggtc 72256443

                                                                         
Query: 839      atcaccatcggcaacgagcgcttccggtgtccagaggcgctcttccagccctccttc 895
                |||||||||||||| ||||||||||| || || ||| | ||||||||||||||||||
Sbjct: 72256442 atcaccatcggcaatgagcgcttccgctgcccggagaccctcttccagccctccttc 72256386



 Score =  125 bits (63), Expect = 1e-25
 Identities = 126/147 (85%)
 Strand = Plus / Minus

                                                                            
Query: 545      ggcattgtcatggactctggggatggggtcacccacacggtgcccatctacgaggggtac 604
                ||||| ||| |||| || |||||||| ||||||||||  || || ||||| ||||| |||
Sbjct: 72257787 ggcatcgtcctggattccggggatggcgtcacccacaatgtccctatctatgagggatac 72257728

                                                                            
Query: 605      gccctgccccacgccatcctgcgtctggacctggctggccgggacctgaccgactacctc 664
                || ||||||||||||||| |||| ||||| ||||||||||| ||||| || |||||||||
Sbjct: 72257727 gcactgccccacgccatcatgcgcctggatctggctggccgcgacctcacggactacctc 72257668

                                           
Query: 665      atgaagatcctcacggagcggggctac 691
                |||||||||||||| ||| | ||||||
Sbjct: 72257667 atgaagatcctcacagagagaggctac 72257641



 Score =  123 bits (62), Expect = 4e-25
 Identities = 113/130 (86%)
 Strand = Plus / Minus

                                                                            
Query: 1097     gagcgcaagtactcggtgtggatcgggggctccatcctggcctcgctgtccaccttccag 1156
                ||||| ||||||||||| |||||||| ||||| ||||||||||| || ||||||||||||
Sbjct: 72252078 gagcggaagtactcggtctggatcggaggctctatcctggcctctctctccaccttccag 72252019

                                                                            
Query: 1157     cagatgtggatcagcaagcaggagtacgacgagtcgggcccgtccatcgtccaccgcaaa 1216
                |||||||||||||||||||  ||||| |||||| | || || ||||| |||||| | || 
Sbjct: 72252018 cagatgtggatcagcaagccagagtatgacgaggcagggccttccattgtccacaggaag 72251959

                          
Query: 1217     tgcttctaga 1226
                ||||||||||
Sbjct: 72251958 tgcttctaga 72251949



 Score =  113 bits (57), Expect = 4e-22
 Identities = 120/141 (85%)
 Strand = Plus / Minus

                                                                            
Query: 941      atcatgaagtgcgacgtggacatcaggaaggacctctacgccaacacggtgctgtctggc 1000
                ||||||||||| ||| | |||||| | || ||| | ||||||||||  || || ||||| 
Sbjct: 72255302 atcatgaagtgtgacattgacatccgcaaagacttatacgccaacaacgtcctctctggg 72255243

                                                                            
Query: 1001     gggaccaccatgtaccccggcatcgccgacaggatgcagaaggagatcacggccctggcg 1060
                || ||||| ||||| || ||||| |||||||||||||||||||||||||| |||||||| 
Sbjct: 72255242 ggtaccactatgtatcctggcattgccgacaggatgcagaaggagatcacagccctggcc 72255183

                                     
Query: 1061     cccagcaccatgaagatcaag 1081
                ||||| |||||||||||||||
Sbjct: 72255182 cccagtaccatgaagatcaag 72255162



 Score =  113 bits (57), Expect = 4e-22
 Identities = 96/109 (88%)
 Strand = Plus / Minus

                                                                            
Query: 348      agatctggcatcacaccttctacaacgagctgcgcgtggcccccgaggagcaccccgtgc 407
                |||||||||| ||| ||||||||||||||||||| || || || ||||||||||||   |
Sbjct: 72310107 agatctggcaccactccttctacaacgagctgcgggtagcacctgaggagcaccccaccc 72310048

                                                                 
Query: 408      tgctcacggaggcccccctgaaccccaaggccaaccgtgagaagatgac 456
                ||||||||||||||||||| || |||||||||||| | |||||||||||
Sbjct: 72310047 tgctcacggaggcccccctaaatcccaaggccaacagggagaagatgac 72309999



 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                           
Query: 126     tcgacaatggctccggcatgtgcaaagctggctttgctggggatgacgccccccgggccg 185
               ||||||| ||||||||||||||||| || |||||||| || || || || ||||||||||
Sbjct: 4731826 tcgacaacggctccggcatgtgcaaggccggctttgcgggcgacgatgctccccgggccg 4731767

                                                   
Query: 186     tgttcccgtccatcgtcgggcgtccccgacaccagg 221
               | ||||| |||||||| ||||| |||||||||||||
Sbjct: 4731766 tcttcccctccatcgtggggcgcccccgacaccagg 4731731


>Sscrofa_Chr16 
||          Length = 86898991

 Score =  565 bits (285), Expect = e-158
 Identities = 558/649 (85%)
 Strand = Plus / Minus

                                                                            
Query: 131      aatggctccggcatgtgcaaagctggctttgctggggatgacgccccccgggccgtgttc 190
                |||||||| || |||||||| || ||||||| ||| || || ||||||||||| ||||||
Sbjct: 38871140 aatggctcagggatgtgcaaggcaggctttggtggtgacgatgccccccgggctgtgttc 38871081

                                                                            
Query: 191      ccgtccatcgtcgggcgtccccgacaccagggtgtcatggtgggcatgggccagaaggac 250
                || ||| | || ||||||||||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 38871080 ccctccgtggtagggcgtccccggcaccagggcgtcatggtaggcatgggccagaaggac 38871021

                                                                            
Query: 251      agctacgtgggcgacgaggctcagagcaagcggggcatcctgaccctcaagtaccccatc 310
                 |||| ||||| || || || ||||||||| |||||||||||||||| ||||| ||||| 
Sbjct: 38871020 tgctatgtgggggatgaagcccagagcaagaggggcatcctgaccctgaagtatcccatt 38870961

                                                                            
Query: 311      gaacacggcatcgtcaccaactgggacgacatggagaagatctggcatcacaccttctac 370
                || || ||  | |||||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 38870960 gagcatggagtggtcaccaactgggatgacatggagaagatctggcaccacactttctac 38870901

                                                                            
Query: 371      aacgagctgcgcgtggcccccgaggagcaccccgtgctgctcacggaggcccccctgaac 430
                || ||||| || ||||| || || ||||||||| | || ||||| ||||||||||| |||
Sbjct: 38870900 aatgagctccgtgtggcaccagatgagcaccccatcctcctcaccgaggcccccctcaac 38870841

                                                                            
Query: 431      cccaaggccaaccgtgagaagatgactcagatcatgttcgagaccttcaacacgccggcc 490
                ||||||  |||||| ||||| ||||||||||||||||||||| | |||||||| || |||
Sbjct: 38870840 cccaagatcaaccgagagaaaatgactcagatcatgttcgaggctttcaacacacctgcc 38870781

                                                                            
Query: 491      atgtacgtggccatccaggccgtgctgtccctgtacgcctctggccgcaccactggcatt 550
                ||||| ||||| |||||||| ||| | ||||| || ||||| ||||| ||||||||||| 
Sbjct: 38870780 atgtatgtggctatccaggctgtgttatccctctatgcctcgggccggaccactggcatc 38870721

                                                                            
Query: 551      gtcatggactctggggatggggtcacccacacggtgcccatctacgaggggtacgccctg 610
                || ||||| ||||||||||||||||| ||||| ||||||||||| || || |||||||||
Sbjct: 38870720 gtgatggattctggggatggggtcactcacacagtgcccatctatgaaggctacgccctg 38870661

                                                                            
Query: 611      ccccacgccatcctgcgtctggacctggctggccgggacctgaccgactacctcatgaag 670
                ||||| |||||||| |||||||||||||||||| | |||||||| |||||||||||||||
Sbjct: 38870660 ccccatgccatcctccgtctggacctggctggcagagacctgactgactacctcatgaag 38870601

                                                                            
Query: 671      atcctcacggagcggggctacagcttcaccaccacggccgagcgggagatcgtgcgggac 730
                ||||| ||||| || ||||||| ||| |||||||| |||||||||||||| || || || 
Sbjct: 38870600 atcctgacggaacgaggctacaactttaccaccacagccgagcgggagattgtccgcgat 38870541

                                                                 
Query: 731      atcaaggagaagctctgctacgtcgccctggacttcgagcaggagatgg 779
                 |||| |||||||| |||||||| |||||||||||||| || |||||||
Sbjct: 38870540 gtcaaagagaagctgtgctacgtggccctggacttcgaacaagagatgg 38870492


>Sscrofa_Chr01 
||          Length = 315321322

 Score =  486 bits (245), Expect = e-134
 Identities = 436/498 (87%), Gaps = 5/498 (1%)
 Strand = Plus / Plus

                                                                             
Query: 1408      gaccttgtactcgagttaactcttcccttggtctctgtttaataccctgtgcatatcttt 1467
                 ||||||||| || ||||||||||||||||||| | ||||||||||||| |||||||||| 
Sbjct: 248571679 gaccttgtattcaagttaactcttcccttggtatatgtttaataccctctgcatatctt- 248571737

                                                                             
Query: 1468      gatttaaacccctagttacacacacgcggctctgtcacctcgtggctgaggtgagaacct 1527
                 ||||||||||||||||| ||     || |||||||||||| ||||||||||||||||| |
Sbjct: 248571738 gatttaaacccctagttgcat----gctgctctgtcaccttgtggctgaggtgagaacat 248571793

                                                                             
Query: 1528      gtttatcgtggaagagaaatccgttggctggttgagaatctgagacggagtctctccgat 1587
                 ||||||  ||||||||||||| |||||||||||||||||||||||| |||||||||| ||
Sbjct: 248571794 gtttattatggaagagaaatctgttggctggttgagaatctgagactgagtctctccaat 248571853

                                                                             
Query: 1588      ctgtgcagggtattcatgtgtccgagctcctattccaggatttctctcgaggctgggcag 1647
                 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||
Sbjct: 248571854 ctgtgcagggtattcatgtgtccaagctcctattccaggatttctctcgaggctggcaag 248571913

                                                                             
Query: 1648      agtcctgaaccagttgtcatttctgtcttgccggtctgacggggttgggaaggtccgagc 1707
                 |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 248571914 agtcctgaaccagttgtcatttctgtcttgccagtctgacggggttgggaaggtctgagc 248571973

                                                                             
Query: 1708      cttgagacccactgtcctttcttccccgatgtttgcccgacaaaaaaccgaggagtgtta 1767
                 |||  ||||||||||||||||||   | |||||| |||| || ||||||| ||  |||||
Sbjct: 248571974 cttaggacccactgtcctttcttaggcaatgttttcccgccagaaaaccgtgggttgtta 248572033

                                                                             
Query: 1768      acttgctctgagttggaagcgattgcattcacagctgtaaattaaatcatccttgtagtc 1827
                 ||||||  ||||||||||  | ||||||||||| ||||||||  | ||| ||||  | | 
Sbjct: 248572034 acttgccttgagttggaaaagtttgcattcacacctgtaaatgtattcaccctttaattt 248572093

                                                                             
Query: 1828      aggtacggttattgtacgccattctcagttccataatagacgaccaccgattttggtttt 1887
                 | ||| |||| |||||||| ||||||| |||  ||| ||| ||| || ||||||||||||
Sbjct: 248572094 atgtaaggtttttgtacgcaattctcaattctttaagagatgacaacagattttggtttt 248572153

                                   
Query: 1888      ctactgtcacgtgagaac 1905
                 ||||||||||||||||||
Sbjct: 248572154 ctactgtcacgtgagaac 248572171



 Score =  319 bits (161), Expect = 3e-84
 Identities = 284/325 (87%)
 Strand = Plus / Plus

                                                                             
Query: 219       agggtgtcatggtgggcatgggccagaaggacagctacgtgggcgacgaggctcagagca 278
                 |||| ||||||||||| ||||| ||||||||   ||||||||| |||||||| |||||||
Sbjct: 152414261 agggggtcatggtgggtatgggtcagaaggattcctacgtgggtgacgaggcccagagca 152414320

                                                                             
Query: 279       agcggggcatcctgaccctcaagtaccccatcgaacacggcatcgtcaccaactgggacg 338
                 |||| || || |||||||||||||| ||||| || || |||||| ||||||||||||| |
Sbjct: 152414321 agcgaggtattctgaccctcaagtatcccattgagcatggcatcatcaccaactgggatg 152414380

                                                                             
Query: 339       acatggagaagatctggcatcacaccttctacaacgagctgcgcgtggcccccgaggagc 398
                 ||||||||||||||||||| |||||||||||||||||||| || || |||||||||||||
Sbjct: 152414381 acatggagaagatctggcaccacaccttctacaacgagctccgtgtagcccccgaggagc 152414440

                                                                             
Query: 399       accccgtgctgctcacggaggcccccctgaaccccaaggccaaccgtgagaagatgactc 458
                 ||||    |||||||| ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 152414441 accctactctgctcactgaggcccccctgaaccccaaggccaaccgcgagaagatgaccc 152414500

                                                                             
Query: 459       agatcatgttcgagaccttcaacacgccggccatgtacgtggccatccaggccgtgctgt 518
                 |||||||||| || ||||||||    || |||||||| |||||||||||||| |||||||
Sbjct: 152414501 agatcatgtttgaaaccttcaatgtccctgccatgtatgtggccatccaggcggtgctgt 152414560

                                          
Query: 519       ccctgtacgcctctggccgcaccac 543
                 |||| || || |||||||| |||||
Sbjct: 152414561 ccctctatgcttctggccgtaccac 152414585



 Score =  135 bits (68), Expect = 1e-28
 Identities = 113/128 (88%)
 Strand = Plus / Plus

                                                                             
Query: 1097      gagcgcaagtactcggtgtggatcgggggctccatcctggcctcgctgtccaccttccag 1156
                 ||||| |||||||| || ||||| ||||||||||||||||| ||  ||||||||||||| 
Sbjct: 152417305 gagcgtaagtactctgtctggattgggggctccatcctggcatccttgtccaccttccaa 152417364

                                                                             
Query: 1157      cagatgtggatcagcaagcaggagtacgacgagtcgggcccgtccatcgtccaccgcaaa 1216
                 ||||||||||| |||||||| ||||| || ||| | ||||| ||||||||||||||||||
Sbjct: 152417365 cagatgtggattagcaagcaagagtatgatgaggcaggcccatccatcgtccaccgcaaa 152417424

                         
Query: 1217      tgcttcta 1224
                 ||||||||
Sbjct: 152417425 tgcttcta 152417432



 Score =  127 bits (64), Expect = 2e-26
 Identities = 142/168 (84%)
 Strand = Plus / Plus

                                                                             
Query: 728       gacatcaaggagaagctctgctacgtcgccctggacttcgagcaggagatggccaccgcc 787
                 ||||| || |||||||| ||||| || |||||||| || ||| | |||||||| || || 
Sbjct: 152415603 gacattaaagagaagctgtgctatgttgccctggattttgagaatgagatggctacagct 152415662

                                                                             
Query: 788       gcgtcctcctcctccctggagaagagctacgagctgcccgacggccaggtcatcaccatc 847
                 || || ||||||||| ||||||||||||| || ||||| || |||||||||||||| || 
Sbjct: 152415663 gcttcttcctcctccttggagaagagctatgaactgcctgatggccaggtcatcactatt 152415722

                                                                 
Query: 848       ggcaacgagcgcttccggtgtccagaggcgctcttccagccctccttc 895
                 ||||| ||||||||||| || || ||| ||||||||||||||||||||
Sbjct: 152415723 ggcaatgagcgcttccgctgccctgagacgctcttccagccctccttc 152415770



 Score =  117 bits (59), Expect = 2e-23
 Identities = 116/135 (85%)
 Strand = Plus / Plus

                                                                             
Query: 557       gactctggggatggggtcacccacacggtgcccatctacgaggggtacgccctgccccac 616
                 |||||||||||||| || |||||||  || ||||| |||||||| || ||| |||| || 
Sbjct: 152415248 gactctggggatggcgtaacccacaacgtccccatttacgagggctatgccttgccacat 152415307

                                                                             
Query: 617       gccatcctgcgtctggacctggctggccgggacctgaccgactacctcatgaagatcctc 676
                 |||||| |||||||||| |||||||| ||||| || || |||||||||||||||||||||
Sbjct: 152415308 gccatcatgcgtctggatctggctggtcgggatctcactgactacctcatgaagatcctc 152415367

                                
Query: 677       acggagcggggctac 691
                 || ||||| ||||||
Sbjct: 152415368 actgagcgtggctac 152415382



 Score =  111 bits (56), Expect = 1e-21
 Identities = 131/157 (83%), Gaps = 8/157 (5%)
 Strand = Plus / Minus

                                                                             
Query: 627       gtctggacctggctggccgggacctgaccgactacctcatgaagatcctcacggagcggg 686
                 |||||||||||||||||| ||||||||| |||||||||| |||||| |||| |||||   
Sbjct: 248571681 gtctggacctggctggccaggacctgactgactacctcaagaagattctcaaggagc--- 248571625

                                                                             
Query: 687       gctacagcttcaccaccacggccgagcgggagatcgtgcgggacatcaaggagaagctct 746
                      ||||||||  |||| |||||| ||||||| || || ||| ||||| |||||||||
Sbjct: 248571624 -----agcttcactgccacagccgagggggagattgttcgtgacttcaagaagaagctct 248571570

                                                      
Query: 747       gctacgtcgccctggacttcgagcaggagatggccac 783
                 ||||||| || |||||||| ||||||||| |||||||
Sbjct: 248571569 gctacgttgctctggacttggagcaggaggtggccac 248571533



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 74/87 (85%)
 Strand = Plus / Plus

                                                                             
Query: 995       tctggcgggaccaccatgtaccccggcatcgccgacaggatgcagaaggagatcacggcc 1054
                 ||||| || |||||||||||||| || || || ||  | ||||| ||||| ||||| |||
Sbjct: 152416649 tctggaggtaccaccatgtacccaggtattgctgatcgcatgcaaaaggaaatcactgcc 152416708

                                            
Query: 1055      ctggcgcccagcaccatgaagatcaag 1081
                 ||||| |||||||||||||||||||||
Sbjct: 152416709 ctggctcccagcaccatgaagatcaag 152416735


>Sscrofa_Chr14 
||          Length = 153851969

 Score =  416 bits (210), Expect = e-113
 Identities = 297/326 (91%)
 Strand = Plus / Plus

                                                                            
Query: 218      cagggtgtcatggtgggcatgggccagaaggacagctacgtgggcgacgaggctcagagc 277
                ||||| ||||||||||| ||||| ||||| ||   |||||||||||||||||||||||||
Sbjct: 65237534 cagggcgtcatggtgggtatgggtcagaaagattcctacgtgggcgacgaggctcagagc 65237593

                                                                            
Query: 278      aagcggggcatcctgaccctcaagtaccccatcgaacacggcatcgtcaccaactgggac 337
                ||| | || |||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 65237594 aagagaggtatcctgaccctcaagtaccccatcgagcacggcatcatcaccaactgggac 65237653

                                                                            
Query: 338      gacatggagaagatctggcatcacaccttctacaacgagctgcgcgtggcccccgaggag 397
                |||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||
Sbjct: 65237654 gacatggagaagatctggcaccacaccttctacaacgagctccgggtggcccccgaggag 65237713

                                                                            
Query: 398      caccccgtgctgctcacggaggcccccctgaaccccaaggccaaccgtgagaagatgact 457
                ||||||   |||||||| ||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 65237714 caccccaccctgctcaccgaggcccccctcaaccccaaggccaaccgcgagaagatgact 65237773

                                                                            
Query: 458      cagatcatgttcgagaccttcaacacgccggccatgtacgtggccatccaggccgtgctg 517
                ||||||||||| ||||||||||||  ||| ||||||||||||||||||||||| ||||||
Sbjct: 65237774 cagatcatgtttgagaccttcaacgtgcccgccatgtacgtggccatccaggcagtgctg 65237833

                                          
Query: 518      tccctgtacgcctctggccgcaccac 543
                ||||| |||||||| ||||| |||||
Sbjct: 65237834 tccctctacgcctccggccgtaccac 65237859



 Score =  266 bits (134), Expect = 4e-68
 Identities = 173/186 (93%)
 Strand = Plus / Plus

                                                                            
Query: 710      gagcgggagatcgtgcgggacatcaaggagaagctctgctacgtcgccctggacttcgag 769
                ||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 65238245 gagcgcgagatcgtgcgcgacatcaaggagaagctatgctacgtggccctggacttcgag 65238304

                                                                            
Query: 770      caggagatggccaccgccgcgtcctcctcctccctggagaagagctacgagctgcccgac 829
                 | ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 65238305 aacgagatggccaccgccgcctcctcctcctccctggagaagagctacgagctgccagac 65238364

                                                                            
Query: 830      ggccaggtcatcaccatcggcaacgagcgcttccggtgtccagaggcgctcttccagccc 889
                ||||||||||||||||||||||||||||||||||| || || ||  ||||||||||||||
Sbjct: 65238365 ggccaggtcatcaccatcggcaacgagcgcttccgctgcccggaaacgctcttccagccc 65238424

                      
Query: 890      tccttc 895
                ||||||
Sbjct: 65238425 tccttc 65238430



 Score =  208 bits (105), Expect = 8e-51
 Identities = 135/145 (93%)
 Strand = Plus / Plus

                                                                            
Query: 1080     agatcatcgcgcctcccgagcgcaagtactcggtgtggatcgggggctccatcctggcct 1139
                |||||||||| || || |||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 65238792 agatcatcgccccgccggagcgcaagtactccgtgtggatcggcggctccatcctggcct 65238851

                                                                            
Query: 1140     cgctgtccaccttccagcagatgtggatcagcaagcaggagtacgacgagtcgggcccgt 1199
                |||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| |
Sbjct: 65238852 cgctgtccaccttccagcagatgtggatcaccaagcaggagtacgacgaggccggcccat 65238911

                                         
Query: 1200     ccatcgtccaccgcaaatgcttcta 1224
                | |||||||||||||||||||||||
Sbjct: 65238912 ctatcgtccaccgcaaatgcttcta 65238936



 Score =  208 bits (105), Expect = 8e-51
 Identities = 168/189 (88%)
 Strand = Plus / Minus

                                                                             
Query: 707       gccgagcgggagatcgtgcgggacatcaaggagaagctctgctacgtcgccctggacttc 766
                 |||||||| ||||| || |||||||||||||||||||| ||||| || ||||||||||| 
Sbjct: 109858839 gccgagcgtgagattgtccgggacatcaaggagaagctgtgctatgtagccctggacttt 109858780

                                                                             
Query: 767       gagcaggagatggccaccgccgcgtcctcctcctccctggagaagagctacgagctgccc 826
                 ||  | ||||||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 109858779 gaaaatgagatggccactgccgcgtcctcctcctccctggagaagagctacgagctgcct 109858720

                                                                             
Query: 827       gacggccaggtcatcaccatcggcaacgagcgcttccggtgtccagaggcgctcttccag 886
                 ||||| ||||| ||||||||||| |||||||||||||| || || ||| | || ||||||
Sbjct: 109858719 gacgggcaggtgatcaccatcgggaacgagcgcttccgctgcccggagaccctgttccag 109858660

                          
Query: 887       ccctccttc 895
                 |||||||||
Sbjct: 109858659 ccctccttc 109858651



 Score =  174 bits (88), Expect = 1e-40
 Identities = 148/168 (88%)
 Strand = Plus / Minus

                                                                             
Query: 914       ggcatccacgagaccaccttcaactcgatcatgaagtgcgacgtggacatcaggaaggac 973
                 |||||||| |||||||||| ||||   ||||||||||||||| | |||||||||||||||
Sbjct: 109857385 ggcatccatgagaccacctacaacagcatcatgaagtgcgacattgacatcaggaaggac 109857326

                                                                             
Query: 974       ctctacgccaacacggtgctgtctggcgggaccaccatgtaccccggcatcgccgacagg 1033
                 ||||| || ||||  || || ||||| || |||||||||||||||||||| |||||| | 
Sbjct: 109857325 ctctatgctaacaacgtcctctctgggggcaccaccatgtaccccggcattgccgaccgc 109857266

                                                                 
Query: 1034      atgcagaaggagatcacggccctggcgcccagcaccatgaagatcaag 1081
                 ||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 109857265 atgcagaaggagatcacagccctggcacccagcaccatgaagatcaag 109857218



 Score =  172 bits (87), Expect = 5e-40
 Identities = 132/147 (89%)
 Strand = Plus / Minus

                                                                             
Query: 545       ggcattgtcatggactctggggatggggtcacccacacggtgcccatctacgaggggtac 604
                 ||||||||  |||||||||| ||||| ||||||||||  |||||||| |||||||| |||
Sbjct: 109860451 ggcattgtgctggactctggagatggtgtcacccacaacgtgcccatttacgagggctac 109860392

                                                                             
Query: 605       gccctgccccacgccatcctgcgtctggacctggctggccgggacctgaccgactacctc 664
                 |||||||||||||||||| |||||||||||||||| ||||| || || ||||||||||||
Sbjct: 109860391 gccctgccccacgccatcatgcgtctggacctggcgggccgagatctcaccgactacctc 109860332

                                            
Query: 665       atgaagatcctcacggagcggggctac 691
                 ||||||||||| |||||||| ||||||
Sbjct: 109860331 atgaagatcctgacggagcgtggctac 109860305



 Score =  161 bits (81), Expect = 2e-36
 Identities = 129/145 (88%)
 Strand = Plus / Minus

                                                                             
Query: 1080      agatcatcgcgcctcccgagcgcaagtactcggtgtggatcgggggctccatcctggcct 1139
                 ||||||| || ||||| |||||||| ||||| || ||||| || ||||||||||||||||
Sbjct: 109853150 agatcattgcccctcctgagcgcaaatactccgtctggattggtggctccatcctggcct 109853091

                                                                             
Query: 1140      cgctgtccaccttccagcagatgtggatcagcaagcaggagtacgacgagtcgggcccgt 1199
                 | ||||||||||||||||| |||||||||||||| ||||||||||||||  | || ||||
Sbjct: 109853090 ctctgtccaccttccagcaaatgtggatcagcaaacaggagtacgacgaagccgggccgt 109853031

                                          
Query: 1200      ccatcgtccaccgcaaatgcttcta 1224
                 |||| ||||||||||||||||||||
Sbjct: 109853030 ccattgtccaccgcaaatgcttcta 109853006



 Score =  143 bits (72), Expect = 4e-31
 Identities = 144/168 (85%)
 Strand = Plus / Plus

                                                                            
Query: 914      ggcatccacgagaccaccttcaactcgatcatgaagtgcgacgtggacatcaggaaggac 973
                |||||||| ||||| |||| ||||   ||||||||||||||| | || ||||||||||||
Sbjct: 65238543 ggcatccatgagactacctacaacagcatcatgaagtgcgacatcgatatcaggaaggac 65238602

                                                                            
Query: 974      ctctacgccaacacggtgctgtctggcgggaccaccatgtaccccggcatcgccgacagg 1033
                || ||||||||||  ||  |||| || || |||||||||||||| |||||||| ||| | 
Sbjct: 65238603 ctgtacgccaacaatgtcatgtcagggggcaccaccatgtacccgggcatcgctgaccgc 65238662

                                                                
Query: 1034     atgcagaaggagatcacggccctggcgcccagcaccatgaagatcaag 1081
                ||||||||||||||||| || ||||| |||||||||||||||||||||
Sbjct: 65238663 atgcagaaggagatcaccgctctggcccccagcaccatgaagatcaag 65238710



 Score =  125 bits (63), Expect = 1e-25
 Identities = 117/135 (86%)
 Strand = Plus / Plus

                                                                            
Query: 557      gactctggggatggggtcacccacacggtgcccatctacgaggggtacgccctgccccac 616
                |||||||| || || ||||||||||  ||||||||||| ||||| ||||| ||||| |||
Sbjct: 65237995 gactctggcgacggcgtcacccacaacgtgcccatctatgagggctacgcgctgccacac 65238054

                                                                            
Query: 617      gccatcctgcgtctggacctggctggccgggacctgaccgactacctcatgaagatcctc 676
                |||||| |||| ||||||||||| ||||| || || ||||||||||| ||||||||||||
Sbjct: 65238055 gccatcatgcgcctggacctggccggccgcgatctcaccgactacctgatgaagatcctc 65238114

                               
Query: 677      acggagcggggctac 691
                || ||||| ||||||
Sbjct: 65238115 accgagcgtggctac 65238129



 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 101/119 (84%)
 Strand = Plus / Minus

                                                                             
Query: 227       atggtgggcatgggccagaaggacagctacgtgggcgacgaggctcagagcaagcggggc 286
                 |||||||| ||||| || || |||||||||||||| ||||| || || |||||  | || 
Sbjct: 109866042 atggtgggaatgggacaaaaagacagctacgtgggtgacgaagcccaaagcaaaagagga 109865983

                                                                            
Query: 287       atcctgaccctcaagtaccccatcgaacacggcatcgtcaccaactgggacgacatgga 345
                 ||||||||| | |||||||| || |||||||||||| ||||||||||||| ||||||||
Sbjct: 109865982 atcctgaccttgaagtacccaatagaacacggcatcatcaccaactgggatgacatgga 109865924



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 92/109 (84%)
 Strand = Plus / Minus

                                                                             
Query: 348       agatctggcatcacaccttctacaacgagctgcgcgtggcccccgaggagcaccccgtgc 407
                 |||||||||| ||| | |||||||| ||||| || || ||||| || ||||| ||    |
Sbjct: 109863454 agatctggcaccactctttctacaatgagcttcgtgttgccccagaagagcatccgaccc 109863395

                                                                  
Query: 408       tgctcacggaggcccccctgaaccccaaggccaaccgtgagaagatgac 456
                 ||||||| ||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 109863394 tgctcaccgaggcacccctgaaccccaaggccaaccgggagaagatgac 109863346



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                             
Query: 555       tggactctggggatggggtcacccacacggtgcccatctacgaggggtacgccctgcccc 614
                 |||| ||||||||||| ||||||||| | |||||||| |||||||| | |||| ||||||
Sbjct: 123340269 tggattctggggatggcgtcacccacgccgtgcccatttacgagggcttcgccatgcccc 123340210

                   
Query: 615       ac 616
                 ||
Sbjct: 123340209 ac 123340208


>Sscrofa_Chr10 
||          Length = 79102373

 Score =  238 bits (120), Expect = 9e-60
 Identities = 223/254 (87%), Gaps = 5/254 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1493     gcggctctgtcacctcgtggctgaggtgagaacctgtttatcgtggaagagaaatccgtt 1552
                ||||||||||||||| | ||| ||||||||||| | |   || ||||||| ||||| |||
Sbjct: 10092137 gcggctctgtcaccttggggccgaggtgagaacgtat---tcatggaagacaaatctgtt 10092193

                                                                            
Query: 1553     ggctggttgagaatctgagacggagtctctccgatctgtgcagggtattcatgtgtccga 1612
                || |||||||||||||||||| |||||||||| ||| |||||||||||||||| |||| |
Sbjct: 10092194 ggttggttgagaatctgagaccgagtctctcc-atccgtgcagggtattcatgggtccaa 10092252

                                                                            
Query: 1613     gctcctattccaggatttctctcgaggctgggcagagtcctgaaccagttgtcatttctg 1672
                |||||||||||||||||||||||||||||||  ||||||| ||||| |||||||||||||
Sbjct: 10092253 gctcctattccaggatttctctcgaggctggcaagagtcccgaacccgttgtcatttctg 10092312

                                                                            
Query: 1673     tcttgccggtctgacggggttgggaaggtccgagccttgagacccactgtcctttcttcc 1732
                |||||||  ||| ||||||||||||||| || |||| | ||| ||||||||||||||| |
Sbjct: 10092313 tcttgcccatctaacggggttgggaaggaccaagcc-tcagaaccactgtcctttcttac 10092371

                              
Query: 1733     ccgatgtttgcccg 1746
                ||||||||| ||||
Sbjct: 10092372 ccgatgttttcccg 10092385


>gb|GL894474.1| Sus scrofa unplaced genomic scaffold chrU_scaffold3135
          Length = 30778

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 114/136 (83%), Gaps = 2/136 (1%)
 Strand = Plus / Plus

                                                                         
Query: 690   acagcttcaccaccacggccgagcgggagatcgtgcgggacatcaaggagaagctctgct 749
             |||||||||||||| |||| |||| ||| ||| |||  |||| ||||||| ||  |||||
Sbjct: 24293 acagcttcaccaccgcggctgagcagga-atcatgcctgacaccaaggagcagtgctgct 24351

                                                                         
Query: 750   acgtcgccctggacttcgagcaggagatggccaccgccgcgtcctcctcctccctggaga 809
              ||| ||||||| ||| | |||||||||||||||||||| |||||||  |||||| | | 
Sbjct: 24352 ccgtggccctggccttggcgcaggagatggccaccgccgtgtcctcccgctccct-gtgc 24410

                             
Query: 810   agagctacgagctgcc 825
             ||||||||||||||||
Sbjct: 24411 agagctacgagctgcc 24426



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                         
Query: 1385  ttgtagaccttgttgctgattttgaccttgtactcgagttaactcttcccttggtctctg 1444
             ||||||| ||||| |||||| ||||||||||  || ||||| |||||||||||||   ||
Sbjct: 24987 ttgtagaacttgtcgctgatcttgaccttgtgttcaagttagctcttcccttggtgcgtg 25046

                                       
Query: 1445  tttaataccctgtgcatatctttgat 1470
             |||||  ||| ||||| |||||||||
Sbjct: 25047 tttaacgccccgtgcacatctttgat 25072


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 42,639,951
Number of extensions: 316
Number of successful extensions: 316
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 302
Number of HSP's successfully gapped: 46
Length of query: 1907
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1885
Effective length of database: 2,808,408,574
Effective search space: 5293850161990
Effective search space used: 5293850161990
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)