Animal-Genome cDNA 20110601C-001126


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001126
         (1118 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_776960.1| elongation factor 1-alpha 1 [Bos taurus].            462   e-130
Alignment   gi|XP_001249988.1| PREDICTED: eukaryotic translation elongation...   460   e-129
Alignment   gi|XP_002707888.1| PREDICTED: eukaryotic translation elongation...   453   e-127
Alignment   gi|XP_001789118.1| PREDICTED: eukaryotic translation elongation...   452   e-127
Alignment   gi|XP_001251588.1| PREDICTED: eukaryotic translation elongation...   446   e-125
Alignment   gi|XP_002689033.1| PREDICTED: eukaryotic translation elongation...   444   e-125
Alignment   gi|XP_002697322.1| PREDICTED: eukaryotic translation elongation...   438   e-123
Alignment   gi|XP_002702894.1| PREDICTED: eukaryotic translation elongation...   438   e-123
Alignment   gi|XP_002689070.1| PREDICTED: eukaryotic translation elongation...   429   e-120
Alignment   gi|NP_001032541.1| elongation factor 1-alpha 2 [Bos taurus].         427   e-120

>ref|NP_776960.1| elongation factor 1-alpha 1 [Bos taurus].
          Length = 462

 Score =  462 bits (1188), Expect = e-130
 Identities = 225/225 (100%), Positives = 225/225 (100%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 208 MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 267

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG
Sbjct: 268 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 327

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL
Sbjct: 328 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 387

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT
Sbjct: 388 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 432


>ref|XP_001249988.1| PREDICTED: eukaryotic translation elongation factor 1 alpha 1
           isoform 1 [Bos taurus].
          Length = 462

 Score =  460 bits (1183), Expect = e-129
 Identities = 224/224 (100%), Positives = 224/224 (100%)
 Frame = +2

Query: 5   PWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVE 184
           PWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVE
Sbjct: 209 PWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVE 268

Query: 185 TGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGD 364
           TGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGD
Sbjct: 269 TGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGD 328

Query: 365 SKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLE 544
           SKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLE
Sbjct: 329 SKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLE 388

Query: 545 DGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           DGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT
Sbjct: 389 DGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 432


>ref|XP_002707888.1| PREDICTED: eukaryotic translation elongation factor 1 alpha 1-like
           [Bos taurus].
          Length = 461

 Score =  453 bits (1165), Expect = e-127
 Identities = 220/224 (98%), Positives = 222/224 (99%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKVTRKDGNASGT LLEALDCILPPTRPTDKPLRLPLQD+YKIGGIGTVPVGRV
Sbjct: 208 MPWFKGWKVTRKDGNASGTPLLEALDCILPPTRPTDKPLRLPLQDIYKIGGIGTVPVGRV 267

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG
Sbjct: 268 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 327

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           +SKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRS KKL
Sbjct: 328 NSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSAKKL 387

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQ 673
           EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQ
Sbjct: 388 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQ 431


>ref|XP_001789118.1| PREDICTED: eukaryotic translation elongation factor 1 alpha 1
           isoform 1 [Bos taurus].
          Length = 461

 Score =  452 bits (1163), Expect = e-127
 Identities = 221/225 (98%), Positives = 221/225 (98%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKVTRKDGNASGT LLEALDCILPPTRPTDKPLRL LQDVYKIGGIGTVPVGRV
Sbjct: 207 MPWFKGWKVTRKDGNASGTPLLEALDCILPPTRPTDKPLRLSLQDVYKIGGIGTVPVGRV 266

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPVNV TEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVR GNVAG
Sbjct: 267 ETGVLKPGMVVTFAPVNVITEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRHGNVAG 326

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL
Sbjct: 327 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 386

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT
Sbjct: 387 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 431


>ref|XP_001251588.1| PREDICTED: eukaryotic translation elongation factor 1 alpha 1
           isoform 1 [Bos taurus].
          Length = 462

 Score =  446 bits (1147), Expect = e-125
 Identities = 218/225 (96%), Positives = 220/225 (97%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKG KVT KDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGT PVGRV
Sbjct: 208 MPWFKGRKVTHKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTGPVGRV 267

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPV+VTTEVKSVEMHHEALSEALPGDNVGFN+KNVSVKDVRRGNV G
Sbjct: 268 ETGVLKPGMVVTFAPVSVTTEVKSVEMHHEALSEALPGDNVGFNIKNVSVKDVRRGNVVG 327

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKID RSGKKL
Sbjct: 328 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDHRSGKKL 387

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT
Sbjct: 388 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 432


>ref|XP_002689033.1| PREDICTED: eukaryotic translation elongation factor 1 alpha 1-like
           [Bos taurus].
          Length = 462

 Score =  444 bits (1141), Expect = e-125
 Identities = 217/225 (96%), Positives = 219/225 (97%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKG KVT KDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGT PVGRV
Sbjct: 208 MPWFKGRKVTHKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTGPVGRV 267

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPV+VTTEVKSVEMHHEALSEALPGDNVGFN+KNVSVKDVRRGNV G
Sbjct: 268 ETGVLKPGMVVTFAPVSVTTEVKSVEMHHEALSEALPGDNVGFNIKNVSVKDVRRGNVVG 327

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEAA FTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKID RSGKKL
Sbjct: 328 DSKNDPPMEAAAFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDHRSGKKL 387

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT
Sbjct: 388 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 432


>ref|XP_002697322.1| PREDICTED: eukaryotic translation elongation factor 1 alpha 1-like
           [Bos taurus].
          Length = 462

 Score =  438 bits (1127), Expect = e-123
 Identities = 214/225 (95%), Positives = 216/225 (96%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKVTRKDGNASGT LLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVG V
Sbjct: 208 MPWFKGWKVTRKDGNASGTPLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGHV 267

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEAL GDNVGFNVKNVSVKDV RGNVAG
Sbjct: 268 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALHGDNVGFNVKNVSVKDVHRGNVAG 327

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKID  SGKKL
Sbjct: 328 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDHCSGKKL 387

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGDAAI+D VPGKPMCVESFSDYPPLG FA+ DMRQT
Sbjct: 388 EDGPKFLKSGDAAIIDKVPGKPMCVESFSDYPPLGHFAMCDMRQT 432


>ref|XP_002702894.1| PREDICTED: eukaryotic translation elongation factor 1 alpha 1 [Bos
           taurus].
          Length = 462

 Score =  438 bits (1127), Expect = e-123
 Identities = 214/225 (95%), Positives = 216/225 (96%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKVTRKDGNASGT LLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVG V
Sbjct: 208 MPWFKGWKVTRKDGNASGTPLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGHV 267

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEAL GDNVGFNVKNVSVKDV RGNVAG
Sbjct: 268 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALHGDNVGFNVKNVSVKDVHRGNVAG 327

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKID  SGKKL
Sbjct: 328 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDHCSGKKL 387

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGDAAI+D VPGKPMCVESFSDYPPLG FA+ DMRQT
Sbjct: 388 EDGPKFLKSGDAAIIDKVPGKPMCVESFSDYPPLGHFAMCDMRQT 432


>ref|XP_002689070.1| PREDICTED: eukaryotic translation elongation factor 1 alpha 1-like
           [Bos taurus].
          Length = 460

 Score =  429 bits (1104), Expect = e-120
 Identities = 213/225 (94%), Positives = 215/225 (95%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKG KVTRKDGNASGTTLLEALDCILPPTRPTDKPLRL LQDVYKIGGIGTVPVGRV
Sbjct: 207 MPWFKGRKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLSLQDVYKIGGIGTVPVGRV 266

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPVNV TEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVR GNVAG
Sbjct: 267 ETGVLKPGMVVTFAPVNVITEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRHGNVAG 326

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEAAGFTAQVI+LNHPGQISAG+APVLDCHTAHIACKFAELK KID RSGKKL
Sbjct: 327 DSKNDPPMEAAGFTAQVIVLNHPGQISAGHAPVLDCHTAHIACKFAELK-KIDHRSGKKL 385

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGD AIVDMVPGKPMCVES SDYPPLG FAV DMRQT
Sbjct: 386 EDGPKFLKSGDTAIVDMVPGKPMCVESISDYPPLGHFAVCDMRQT 430


>ref|NP_001032541.1| elongation factor 1-alpha 2 [Bos taurus].
          Length = 463

 Score =  427 bits (1099), Expect = e-120
 Identities = 205/225 (91%), Positives = 216/225 (96%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKV RK+GNASG +LLEALD ILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 208 MPWFKGWKVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 267

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETG+L+PGMVVTFAPVN+TTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKD+RRGNV G
Sbjct: 268 ETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCG 327

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSK+DPP EAA FT+QVIILNHPGQISAGY+PV+DCHTAHIACKFAELKEKIDRRSGKKL
Sbjct: 328 DSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKL 387

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           ED PK LKSGDAAIV+MVPGKPMCVESFS YPPLGRFAVRDMRQT
Sbjct: 388 EDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQT 432


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 41,302,663
Number of extensions: 1128732
Number of successful extensions: 3142
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 3123
Number of HSP's successfully gapped: 21
Length of query: 372
Length of database: 17,681,374
Length adjustment: 104
Effective length of query: 268
Effective length of database: 14,240,222
Effective search space: 3816379496
Effective search space used: 3816379496
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001126
         (1118 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001184045.1| elongation factor 1-alpha 1 [Canis lupus fam...   462   e-130
Alignment   gi|XP_854017.1| PREDICTED: similar to eukaryotic translation el...   461   e-130
Alignment   gi|XP_850407.1| PREDICTED: similar to eukaryotic translation el...   457   e-129
Alignment   gi|XP_850819.1| PREDICTED: similar to eukaryotic translation el...   457   e-129
Alignment   gi|XP_865737.1| PREDICTED: similar to eukaryotic translation el...   451   e-127
Alignment   gi|XP_865724.1| PREDICTED: similar to eukaryotic translation el...   451   e-127
Alignment   gi|XP_865709.1| PREDICTED: similar to eukaryotic translation el...   451   e-127
Alignment   gi|XP_865692.1| PREDICTED: similar to eukaryotic translation el...   451   e-127
Alignment   gi|XP_852422.1| PREDICTED: similar to eukaryotic translation el...   451   e-127
Alignment   gi|XP_856113.1| PREDICTED: similar to eukaryotic translation el...   449   e-126

>ref|NP_001184045.1| elongation factor 1-alpha 1 [Canis lupus familiaris].
          Length = 462

 Score =  462 bits (1188), Expect = e-130
 Identities = 225/225 (100%), Positives = 225/225 (100%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 208 MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 267

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG
Sbjct: 268 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 327

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL
Sbjct: 328 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 387

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT
Sbjct: 388 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 432


>ref|XP_854017.1| PREDICTED: similar to eukaryotic translation elongation factor 1
           alpha 1 [Canis familiaris].
          Length = 307

 Score =  461 bits (1187), Expect = e-130
 Identities = 224/225 (99%), Positives = 225/225 (100%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 54  MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 113

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG
Sbjct: 114 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 173

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL
Sbjct: 174 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 233

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGDAAI+DMVPGKPMCVESFSDYPPLGRFAVRDMRQT
Sbjct: 234 EDGPKFLKSGDAAIIDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 278


>ref|XP_850407.1| PREDICTED: similar to eukaryotic translation elongation factor 1
           alpha 1 [Canis familiaris].
          Length = 462

 Score =  457 bits (1176), Expect = e-129
 Identities = 224/225 (99%), Positives = 224/225 (99%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 208 MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 267

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG
Sbjct: 268 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 327

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLD HTAHIACKFAELKEKIDRRSGKKL
Sbjct: 328 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDRHTAHIACKFAELKEKIDRRSGKKL 387

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT
Sbjct: 388 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 432


>ref|XP_850819.1| PREDICTED: similar to eukaryotic translation elongation factor 1
           alpha 1 [Canis familiaris].
          Length = 294

 Score =  457 bits (1176), Expect = e-129
 Identities = 222/225 (98%), Positives = 224/225 (99%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 40  MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 99

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKP MVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG
Sbjct: 100 ETGVLKPSMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 159

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAH+ACKFAELK+KIDRRSGKKL
Sbjct: 160 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHLACKFAELKKKIDRRSGKKL 219

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT
Sbjct: 220 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 264


>ref|XP_865737.1| PREDICTED: similar to eukaryotic translation elongation factor 1
           alpha 1 isoform 5 [Canis familiaris].
          Length = 308

 Score =  451 bits (1161), Expect = e-127
 Identities = 220/225 (97%), Positives = 221/225 (98%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKVTRKDGNASGTTLLEALDCILPPT PTDKPL LPLQDVYKIGGIGTVPVGRV
Sbjct: 54  MPWFKGWKVTRKDGNASGTTLLEALDCILPPTCPTDKPLHLPLQDVYKIGGIGTVPVGRV 113

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDV RGNVAG
Sbjct: 114 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVHRGNVAG 173

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAH ACKFAELKEKIDRRSGKKL
Sbjct: 174 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHTACKFAELKEKIDRRSGKKL 233

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGDAAIVDMVPGKPMCV+SFSDYPPLGRFAVRDMRQT
Sbjct: 234 EDGPKFLKSGDAAIVDMVPGKPMCVKSFSDYPPLGRFAVRDMRQT 278


>ref|XP_865724.1| PREDICTED: similar to eukaryotic translation elongation factor 1
           alpha 1 isoform 4 [Canis familiaris].
          Length = 308

 Score =  451 bits (1161), Expect = e-127
 Identities = 220/225 (97%), Positives = 221/225 (98%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKVTRKDGNASGTTLLEALDCILPPT PTDKPL LPLQDVYKIGGIGTVPVGRV
Sbjct: 54  MPWFKGWKVTRKDGNASGTTLLEALDCILPPTCPTDKPLHLPLQDVYKIGGIGTVPVGRV 113

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDV RGNVAG
Sbjct: 114 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVHRGNVAG 173

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAH ACKFAELKEKIDRRSGKKL
Sbjct: 174 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHTACKFAELKEKIDRRSGKKL 233

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGDAAIVDMVPGKPMCV+SFSDYPPLGRFAVRDMRQT
Sbjct: 234 EDGPKFLKSGDAAIVDMVPGKPMCVKSFSDYPPLGRFAVRDMRQT 278


>ref|XP_865709.1| PREDICTED: similar to eukaryotic translation elongation factor 1
           alpha 1 isoform 3 [Canis familiaris].
          Length = 308

 Score =  451 bits (1161), Expect = e-127
 Identities = 220/225 (97%), Positives = 221/225 (98%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKVTRKDGNASGTTLLEALDCILPPT PTDKPL LPLQDVYKIGGIGTVPVGRV
Sbjct: 54  MPWFKGWKVTRKDGNASGTTLLEALDCILPPTCPTDKPLHLPLQDVYKIGGIGTVPVGRV 113

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDV RGNVAG
Sbjct: 114 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVHRGNVAG 173

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAH ACKFAELKEKIDRRSGKKL
Sbjct: 174 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHTACKFAELKEKIDRRSGKKL 233

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGDAAIVDMVPGKPMCV+SFSDYPPLGRFAVRDMRQT
Sbjct: 234 EDGPKFLKSGDAAIVDMVPGKPMCVKSFSDYPPLGRFAVRDMRQT 278


>ref|XP_865692.1| PREDICTED: similar to eukaryotic translation elongation factor 1
           alpha 1 isoform 2 [Canis familiaris].
          Length = 308

 Score =  451 bits (1161), Expect = e-127
 Identities = 220/225 (97%), Positives = 221/225 (98%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKVTRKDGNASGTTLLEALDCILPPT PTDKPL LPLQDVYKIGGIGTVPVGRV
Sbjct: 54  MPWFKGWKVTRKDGNASGTTLLEALDCILPPTCPTDKPLHLPLQDVYKIGGIGTVPVGRV 113

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDV RGNVAG
Sbjct: 114 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVHRGNVAG 173

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAH ACKFAELKEKIDRRSGKKL
Sbjct: 174 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHTACKFAELKEKIDRRSGKKL 233

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGDAAIVDMVPGKPMCV+SFSDYPPLGRFAVRDMRQT
Sbjct: 234 EDGPKFLKSGDAAIVDMVPGKPMCVKSFSDYPPLGRFAVRDMRQT 278


>ref|XP_852422.1| PREDICTED: similar to eukaryotic translation elongation factor 1
           alpha 1 isoform 1 [Canis familiaris].
          Length = 308

 Score =  451 bits (1161), Expect = e-127
 Identities = 220/225 (97%), Positives = 221/225 (98%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKVTRKDGNASGTTLLEALDCILPPT PTDKPL LPLQDVYKIGGIGTVPVGRV
Sbjct: 54  MPWFKGWKVTRKDGNASGTTLLEALDCILPPTCPTDKPLHLPLQDVYKIGGIGTVPVGRV 113

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDV RGNVAG
Sbjct: 114 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVHRGNVAG 173

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAH ACKFAELKEKIDRRSGKKL
Sbjct: 174 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHTACKFAELKEKIDRRSGKKL 233

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGDAAIVDMVPGKPMCV+SFSDYPPLGRFAVRDMRQT
Sbjct: 234 EDGPKFLKSGDAAIVDMVPGKPMCVKSFSDYPPLGRFAVRDMRQT 278


>ref|XP_856113.1| PREDICTED: similar to eukaryotic translation elongation factor 1
           alpha 1 isoform 3 [Canis familiaris].
          Length = 262

 Score =  449 bits (1154), Expect = e-126
 Identities = 218/225 (96%), Positives = 220/225 (97%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKVT KDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 8   MPWFKGWKVTCKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 67

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPVNVTTEVK VEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG
Sbjct: 68  ETGVLKPGMVVTFAPVNVTTEVKPVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 127

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           D KN+PPM+AAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDR SGKKL
Sbjct: 128 DGKNEPPMDAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRHSGKKL 187

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLG FAVRDMRQT
Sbjct: 188 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGHFAVRDMRQT 232


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 42,752,342
Number of extensions: 1099463
Number of successful extensions: 3668
Number of sequences better than 1.0e-05: 126
Number of HSP's gapped: 3624
Number of HSP's successfully gapped: 148
Length of query: 372
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 268
Effective length of database: 15,407,560
Effective search space: 4129226080
Effective search space used: 4129226080
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001126
         (1118 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001393.1| elongation factor 1-alpha 1 [Homo sapiens].          462   e-130
Alignment   gi|NP_001949.1| elongation factor 1-alpha 2 [Homo sapiens].          427   e-120
Alignment   gi|NP_006611.1| HBS1-like protein isoform 1 [Homo sapiens].          102   5e-22
Alignment   gi|NP_001138630.1| HBS1-like protein isoform 2 [Homo sapiens].       102   5e-22
Alignment   gi|NP_001123479.1| eukaryotic peptide chain release factor GTP-...   102   6e-22
Alignment   gi|NP_001123478.1| eukaryotic peptide chain release factor GTP-...   102   6e-22
Alignment   gi|NP_002085.2| eukaryotic peptide chain release factor GTP-bin...   102   6e-22
Alignment   gi|NP_060564.2| eukaryotic peptide chain release factor GTP-bin...   101   1e-21
Alignment   gi|NP_003312.3| elongation factor Tu, mitochondrial precursor [...    77   4e-14
Alignment   gi|NP_004277.2| GTP-binding protein 1 [Homo sapiens].                 56   5e-08

>ref|NP_001393.1| elongation factor 1-alpha 1 [Homo sapiens].
          Length = 462

 Score =  462 bits (1188), Expect = e-130
 Identities = 225/225 (100%), Positives = 225/225 (100%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 208 MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 267

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG
Sbjct: 268 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 327

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL
Sbjct: 328 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 387

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT
Sbjct: 388 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 432


>ref|NP_001949.1| elongation factor 1-alpha 2 [Homo sapiens].
          Length = 463

 Score =  427 bits (1099), Expect = e-120
 Identities = 205/225 (91%), Positives = 216/225 (96%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKV RK+GNASG +LLEALD ILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 208 MPWFKGWKVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 267

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETG+L+PGMVVTFAPVN+TTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKD+RRGNV G
Sbjct: 268 ETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCG 327

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSK+DPP EAA FT+QVIILNHPGQISAGY+PV+DCHTAHIACKFAELKEKIDRRSGKKL
Sbjct: 328 DSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKL 387

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           ED PK LKSGDAAIV+MVPGKPMCVESFS YPPLGRFAVRDMRQT
Sbjct: 388 EDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQT 432


>ref|NP_006611.1| HBS1-like protein isoform 1 [Homo sapiens].
          Length = 684

 Score =  102 bits (255), Expect = 5e-22
 Identities = 61/203 (30%), Positives = 99/203 (48%)
 Frame = +2

Query: 53   GTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVN 232
            G  LLE +D   PP R  DKP RL + DV+K  G G    G++E G ++ G  +   P N
Sbjct: 467  GLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPN 526

Query: 233  VTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQV 412
             T  VK + +H E +  A  GD+V   +  + +  +  G +    K  P      F A++
Sbjct: 527  ETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPK-VPIKACTRFRARI 585

Query: 413  IILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDM 592
            +I N    I+ G+  +L   T         L   +++ +G+  +  PKFL  G  A+V++
Sbjct: 586  LIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVEL 645

Query: 593  VPGKPMCVESFSDYPPLGRFAVR 661
               +P+ +E + D+  LGRF +R
Sbjct: 646  QTQRPIALELYKDFKELGRFMLR 668


>ref|NP_001138630.1| HBS1-like protein isoform 2 [Homo sapiens].
          Length = 642

 Score =  102 bits (255), Expect = 5e-22
 Identities = 61/203 (30%), Positives = 99/203 (48%)
 Frame = +2

Query: 53   GTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVN 232
            G  LLE +D   PP R  DKP RL + DV+K  G G    G++E G ++ G  +   P N
Sbjct: 425  GLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPN 484

Query: 233  VTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQV 412
             T  VK + +H E +  A  GD+V   +  + +  +  G +    K  P      F A++
Sbjct: 485  ETCTVKGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPK-VPIKACTRFRARI 543

Query: 413  IILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDM 592
            +I N    I+ G+  +L   T         L   +++ +G+  +  PKFL  G  A+V++
Sbjct: 544  LIFNIEIPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVEL 603

Query: 593  VPGKPMCVESFSDYPPLGRFAVR 661
               +P+ +E + D+  LGRF +R
Sbjct: 604  QTQRPIALELYKDFKELGRFMLR 626


>ref|NP_001123479.1| eukaryotic peptide chain release factor GTP-binding subunit ERF3A
           isoform 3 [Homo sapiens].
          Length = 499

 Score =  102 bits (254), Expect = 6e-22
 Identities = 61/208 (29%), Positives = 101/208 (48%)
 Frame = +2

Query: 53  GTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVN 232
           G   +  LD +    R  D P+RLP+ D YK   +GTV +G++E+G +  G  +   P  
Sbjct: 281 GLPFIPYLDNLPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSICKGQQLVMMPNK 338

Query: 233 VTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQV 412
              EV  +           PG+N+   +K +  +++  G +  D  N+       F AQ+
Sbjct: 339 HNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDP-NNLCHSGRTFDAQI 397

Query: 413 IILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDM 592
           +I+ H   I  GY  VL  HT     +   L   +D++SG+K +  P+F+K     I  +
Sbjct: 398 VIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARL 457

Query: 593 VPGKPMCVESFSDYPPLGRFAVRDMRQT 676
                +C+E+F D+P +GRF +RD  +T
Sbjct: 458 RTAGTICLETFKDFPQMGRFTLRDEGKT 485


>ref|NP_001123478.1| eukaryotic peptide chain release factor GTP-binding subunit ERF3A
            isoform 2 [Homo sapiens].
          Length = 636

 Score =  102 bits (254), Expect = 6e-22
 Identities = 61/208 (29%), Positives = 101/208 (48%)
 Frame = +2

Query: 53   GTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVN 232
            G   +  LD +    R  D P+RLP+ D YK   +GTV +G++E+G +  G  +   P  
Sbjct: 418  GLPFIPYLDNLPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSICKGQQLVMMPNK 475

Query: 233  VTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQV 412
               EV  +           PG+N+   +K +  +++  G +  D  N+       F AQ+
Sbjct: 476  HNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDP-NNLCHSGRTFDAQI 534

Query: 413  IILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDM 592
            +I+ H   I  GY  VL  HT     +   L   +D++SG+K +  P+F+K     I  +
Sbjct: 535  VIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARL 594

Query: 593  VPGKPMCVESFSDYPPLGRFAVRDMRQT 676
                 +C+E+F D+P +GRF +RD  +T
Sbjct: 595  RTAGTICLETFKDFPQMGRFTLRDEGKT 622


>ref|NP_002085.2| eukaryotic peptide chain release factor GTP-binding subunit ERF3A
            isoform 1 [Homo sapiens].
          Length = 637

 Score =  102 bits (254), Expect = 6e-22
 Identities = 61/208 (29%), Positives = 101/208 (48%)
 Frame = +2

Query: 53   GTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVN 232
            G   +  LD +    R  D P+RLP+ D YK   +GTV +G++E+G +  G  +   P  
Sbjct: 419  GLPFIPYLDNLPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSICKGQQLVMMPNK 476

Query: 233  VTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQV 412
               EV  +           PG+N+   +K +  +++  G +  D  N+       F AQ+
Sbjct: 477  HNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDP-NNLCHSGRTFDAQI 535

Query: 413  IILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDM 592
            +I+ H   I  GY  VL  HT     +   L   +D++SG+K +  P+F+K     I  +
Sbjct: 536  VIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARL 595

Query: 593  VPGKPMCVESFSDYPPLGRFAVRDMRQT 676
                 +C+E+F D+P +GRF +RD  +T
Sbjct: 596  RTAGTICLETFKDFPQMGRFTLRDEGKT 623


>ref|NP_060564.2| eukaryotic peptide chain release factor GTP-binding subunit ERF3B
            [Homo sapiens].
          Length = 628

 Score =  101 bits (252), Expect = 1e-21
 Identities = 60/209 (28%), Positives = 100/209 (47%)
 Frame = +2

Query: 50   SGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPV 229
            +G   +  LD +    R  D P+RLP+ D YK   +GTV +G++E+G +  G  +   P 
Sbjct: 409  TGLPFIPYLDNLPNFNRSIDGPIRLPIVDKYK--DMGTVVLGKLESGSIFKGQQLVMMPN 466

Query: 230  NVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQ 409
                EV  +           PG+N+   +K +  +++  G +  D  N        F  Q
Sbjct: 467  KHNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSN-LCHSGRTFDVQ 525

Query: 410  VIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVD 589
            ++I+ H   I  GY  VL  HT     +   L   +D++SG+K +  P+F+K     I  
Sbjct: 526  IVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIAR 585

Query: 590  MVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
            +     +C+E+F D+P +GRF +RD  +T
Sbjct: 586  LRTAGTICLETFKDFPQMGRFTLRDEGKT 614


>ref|NP_003312.3| elongation factor Tu, mitochondrial precursor [Homo sapiens].
          Length = 455

 Score = 76.6 bits (187), Expect = 4e-14
 Identities = 66/203 (32%), Positives = 98/203 (48%), Gaps = 22/203 (10%)
 Frame = +2

Query: 41  GNASGTTLLEALDCILP-PTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MV 211
           G  S   LL+A+D  +P P R  +KP  LP++ VY + G GTV  G +E G+LK G    
Sbjct: 235 GLKSVQKLLDAVDTYIPVPARDLEKPFLLPVEAVYSVPGRGTVVTGTLERGILKKGDECE 294

Query: 212 VTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEA 391
           +     N+ T V  +EM H++L  A  GDN+G  V+ +  +D+RRG V     +  P + 
Sbjct: 295 LLGHSKNIRTVVTGIEMFHKSLERAEAGDNLGALVRGLKREDLRRGLVMVKPGSIKPHQK 354

Query: 392 AGFTAQVIILN------HPGQISAGYAPVLDCHTAHIACKF------------AELKEKI 517
               AQV IL+      H   +S  + PV+   T  +AC+              +LK  +
Sbjct: 355 V--EAQVYILSKEEGGRHKPFVS-HFMPVMFSLTWDMACRIILPPEKELAMPGEDLKFNL 411

Query: 518 DRRSGKKLEDGPKF-LKSGDAAI 583
             R    LE G +F L+ G+  I
Sbjct: 412 ILRQPMILEKGQRFTLRDGNRTI 434


>ref|NP_004277.2| GTP-binding protein 1 [Homo sapiens].
          Length = 669

 Score = 56.2 bits (134), Expect = 5e-08
 Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 4/165 (2%)
 Frame = +2

Query: 107 DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVN----VTTEVKSVEMHHEA 274
           ++P    + D Y + G+GTV  G    G++K    +   P      ++  VKS+      
Sbjct: 392 EEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFLSIAVKSIHRKRMP 451

Query: 275 LSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYA 454
           + E   G    F +K +    +R+G V    + + P  +  F A++++L+HP  IS  Y 
Sbjct: 452 VKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLN-PQASWEFEAEILVLHHPTTISPRYQ 510

Query: 455 PVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVD 589
            ++ C +         + +K   R+G K     +F+K+ +   +D
Sbjct: 511 AMVHCGSIRQTATILSM-DKDCLRTGDKATVHFRFIKTPEYLHID 554


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 42,197,011
Number of extensions: 1096142
Number of successful extensions: 3391
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 3374
Number of HSP's successfully gapped: 11
Length of query: 372
Length of database: 18,297,164
Length adjustment: 104
Effective length of query: 268
Effective length of database: 14,868,908
Effective search space: 3984867344
Effective search space used: 3984867344
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001126
         (1118 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_034236.2| elongation factor 1-alpha 1 [Mus musculus].          460   e-129
Alignment   gi|NP_031932.1| elongation factor 1-alpha 2 [Mus musculus].          426   e-119
Alignment   gi|NP_001123480.1| eukaryotic peptide chain release factor GTP-...   102   5e-22
Alignment   gi|NP_666178.2| eukaryotic peptide chain release factor GTP-bin...   102   5e-22
Alignment   gi|NP_032205.2| eukaryotic peptide chain release factor GTP-bin...   101   9e-22
Alignment   gi|NP_001036058.1| HBS1-like protein isoform 2 [Mus musculus].       101   1e-21
Alignment   gi|NP_062676.2| HBS1-like protein isoform 1 [Mus musculus].          101   1e-21
Alignment   gi|NP_766333.1| elongation factor Tu, mitochondrial isoform 1 [...    81   1e-15
Alignment   gi|NP_001157185.1| elongation factor Tu, mitochondrial isoform ...    77   2e-14
Alignment   gi|NP_038846.2| GTP-binding protein 1 [Mus musculus].                 56   4e-08

>ref|NP_034236.2| elongation factor 1-alpha 1 [Mus musculus].
          Length = 462

 Score =  460 bits (1183), Expect = e-129
 Identities = 224/225 (99%), Positives = 225/225 (100%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKVTRKDG+ASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 208 MPWFKGWKVTRKDGSASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 267

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG
Sbjct: 268 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 327

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL
Sbjct: 328 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 387

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT
Sbjct: 388 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 432


>ref|NP_031932.1| elongation factor 1-alpha 2 [Mus musculus].
          Length = 463

 Score =  426 bits (1096), Expect = e-119
 Identities = 205/225 (91%), Positives = 215/225 (95%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKV RK+GNASG +LLEALD ILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 208 MPWFKGWKVERKEGNASGVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 267

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETG+L+PGMVVTFAPVN+TTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKD+RRGNV G
Sbjct: 268 ETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCG 327

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSK DPP EAA FT+QVIILNHPGQISAGY+PV+DCHTAHIACKFAELKEKIDRRSGKKL
Sbjct: 328 DSKADPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKL 387

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           ED PK LKSGDAAIV+MVPGKPMCVESFS YPPLGRFAVRDMRQT
Sbjct: 388 EDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQT 432


>ref|NP_001123480.1| eukaryotic peptide chain release factor GTP-binding subunit ERF3A
            isoform 2 [Mus musculus].
          Length = 635

 Score =  102 bits (254), Expect = 5e-22
 Identities = 61/208 (29%), Positives = 101/208 (48%)
 Frame = +2

Query: 53   GTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVN 232
            G   +  LD +    R  D P+RLP+ D YK   +GTV +G++E+G +  G  +   P  
Sbjct: 417  GLPFIPYLDNLPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSICKGQQLVMMPNK 474

Query: 233  VTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQV 412
               EV  +           PG+N+   +K +  +++  G +  D  N+       F AQ+
Sbjct: 475  HNVEVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDL-NNLCHSGRTFDAQI 533

Query: 413  IILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDM 592
            +I+ H   I  GY  VL  HT     +   L   +D++SG+K +  P+F+K     I  +
Sbjct: 534  VIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARL 593

Query: 593  VPGKPMCVESFSDYPPLGRFAVRDMRQT 676
                 +C+E+F D+P +GRF +RD  +T
Sbjct: 594  RTAGTICLETFKDFPQMGRFTLRDEGKT 621


>ref|NP_666178.2| eukaryotic peptide chain release factor GTP-binding subunit ERF3A
            isoform 1 [Mus musculus].
          Length = 636

 Score =  102 bits (254), Expect = 5e-22
 Identities = 61/208 (29%), Positives = 101/208 (48%)
 Frame = +2

Query: 53   GTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVN 232
            G   +  LD +    R  D P+RLP+ D YK   +GTV +G++E+G +  G  +   P  
Sbjct: 418  GLPFIPYLDNLPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSICKGQQLVMMPNK 475

Query: 233  VTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQV 412
               EV  +           PG+N+   +K +  +++  G +  D  N+       F AQ+
Sbjct: 476  HNVEVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDL-NNLCHSGRTFDAQI 534

Query: 413  IILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDM 592
            +I+ H   I  GY  VL  HT     +   L   +D++SG+K +  P+F+K     I  +
Sbjct: 535  VIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARL 594

Query: 593  VPGKPMCVESFSDYPPLGRFAVRDMRQT 676
                 +C+E+F D+P +GRF +RD  +T
Sbjct: 595  RTAGTICLETFKDFPQMGRFTLRDEGKT 622


>ref|NP_032205.2| eukaryotic peptide chain release factor GTP-binding subunit ERF3B
            [Mus musculus].
          Length = 632

 Score =  101 bits (252), Expect = 9e-22
 Identities = 59/209 (28%), Positives = 101/209 (48%)
 Frame = +2

Query: 50   SGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPV 229
            +G   +  LD +    R  D P+RLP+ D YK   +GTV +G++E+G +  G  +   P 
Sbjct: 413  TGLPFIPYLDSLPNFNRSIDGPIRLPIVDKYK--DMGTVVLGKLESGSIFKGQQLVMMPN 470

Query: 230  NVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQ 409
              + EV  +           PG+N+   +K +  +++  G +  +  N        F  Q
Sbjct: 471  KHSVEVLGIVSDDAETDFVAPGENLKIRLKGIEEEEILPGFILCEPSN-LCHSGRTFDVQ 529

Query: 410  VIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVD 589
            ++I+ H   I  GY  VL  HT     +   L   +D++SG+K +  P+F+K     I  
Sbjct: 530  IVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIAR 589

Query: 590  MVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
            +     +C+E+F D+P +GRF +RD  +T
Sbjct: 590  LRTAGTICLETFKDFPQMGRFTLRDEGKT 618


>ref|NP_001036058.1| HBS1-like protein isoform 2 [Mus musculus].
          Length = 679

 Score =  101 bits (251), Expect = 1e-21
 Identities = 58/203 (28%), Positives = 98/203 (48%)
 Frame = +2

Query: 53   GTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVN 232
            G  LLE +D   PP R  DKP RL + DV+K  G G    G++E G ++ G  +   P N
Sbjct: 462  GMCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPN 521

Query: 233  VTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQV 412
             T   K + +H E +  A  GD+V   +  + +  +  G +    K +P      F A++
Sbjct: 522  ETCTAKGITLHDEPVDWAAAGDHVNLTLVGMDIIKINVGCIFCGPK-EPIKACTRFRARI 580

Query: 413  IILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDM 592
            ++ N    I+ G+  +L   T         L   +++ +G+  +  PK L  G  A+V++
Sbjct: 581  LVFNIEVPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVEL 640

Query: 593  VPGKPMCVESFSDYPPLGRFAVR 661
               +P+ +E + D+  LGRF +R
Sbjct: 641  QTQRPVALELYKDFKELGRFMLR 663


>ref|NP_062676.2| HBS1-like protein isoform 1 [Mus musculus].
          Length = 682

 Score =  101 bits (251), Expect = 1e-21
 Identities = 58/203 (28%), Positives = 98/203 (48%)
 Frame = +2

Query: 53   GTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVN 232
            G  LLE +D   PP R  DKP RL + DV+K  G G    G++E G ++ G  +   P N
Sbjct: 465  GMCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPN 524

Query: 233  VTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQV 412
             T   K + +H E +  A  GD+V   +  + +  +  G +    K +P      F A++
Sbjct: 525  ETCTAKGITLHDEPVDWAAAGDHVNLTLVGMDIIKINVGCIFCGPK-EPIKACTRFRARI 583

Query: 413  IILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDM 592
            ++ N    I+ G+  +L   T         L   +++ +G+  +  PK L  G  A+V++
Sbjct: 584  LVFNIEVPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVEL 643

Query: 593  VPGKPMCVESFSDYPPLGRFAVR 661
               +P+ +E + D+  LGRF +R
Sbjct: 644  QTQRPVALELYKDFKELGRFMLR 666


>ref|NP_766333.1| elongation factor Tu, mitochondrial isoform 1 [Mus musculus].
          Length = 452

 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 70/221 (31%), Positives = 104/221 (47%), Gaps = 9/221 (4%)
 Frame = +2

Query: 41  GNASGTTLLEALDCILP-PTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MV 211
           G  S   LL+A+D  +P PTR  DKP  LP++ VY I G GTV  G +E G+LK G    
Sbjct: 232 GVKSVQKLLDAVDTYIPVPTRDLDKPFLLPVESVYSIPGRGTVVTGTLERGILKKGDECE 291

Query: 212 VTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEA 391
           +     N+ T V  +EM H++L  A  GDN+G  V+ +  +D+RRG V     +  P + 
Sbjct: 292 LLGHNKNIRTVVTGIEMFHKSLERAEAGDNLGALVRGLKREDLRRGLVMVKPGSIQPHQK 351

Query: 392 AGFTAQVIILN------HPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGP 553
               AQV IL+      H   +S  + PV+   T  +AC+               L  G 
Sbjct: 352 V--EAQVYILSKEEGGRHKPFVS-HFMPVMFSLTWDMACRVI-------------LPPGK 395

Query: 554 KFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           +    G+   + ++  +PM +E         RF +RD  +T
Sbjct: 396 ELAMPGEDLKLSLILRQPMILEKGQ------RFTLRDGNKT 430


>ref|NP_001157185.1| elongation factor Tu, mitochondrial isoform 2 [Mus musculus].
          Length = 435

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 46/108 (42%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
 Frame = +2

Query: 41  GNASGTTLLEALDCILP-PTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MV 211
           G  S   LL+A+D  +P PTR  DKP  LP++ VY I G GTV  G +E G+LK G    
Sbjct: 232 GVKSVQKLLDAVDTYIPVPTRDLDKPFLLPVESVYSIPGRGTVVTGTLERGILKKGDECE 291

Query: 212 VTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNV 355
           +     N+ T V  +EM H++L  A  GDN+G  V+ +  +D+RRG V
Sbjct: 292 LLGHNKNIRTVVTGIEMFHKSLERAEAGDNLGALVRGLKREDLRRGLV 339


>ref|NP_038846.2| GTP-binding protein 1 [Mus musculus].
          Length = 668

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 4/165 (2%)
 Frame = +2

Query: 107 DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVN----VTTEVKSVEMHHEA 274
           ++P    + D Y + G+GTV  G    G++K    +   P      ++  VKS+      
Sbjct: 392 EEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFLSIAVKSIHRKRMP 451

Query: 275 LSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYA 454
           + E   G    F +K +    +R+G V    + + P  +  F A++++L+HP  IS  Y 
Sbjct: 452 VKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLN-PQASWEFEAEILVLHHPTTISPRYQ 510

Query: 455 PVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVD 589
            ++ C +         + +K   R+G K     +F+K+ +   +D
Sbjct: 511 AMVHCGSIRQTATILSM-DKDCLRTGDKATVHFRFIKTPEYLHID 554


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 35,979,623
Number of extensions: 931014
Number of successful extensions: 2985
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 2972
Number of HSP's successfully gapped: 11
Length of query: 372
Length of database: 15,617,559
Length adjustment: 103
Effective length of query: 269
Effective length of database: 12,523,851
Effective search space: 3368915919
Effective search space used: 3368915919
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001126
         (1118 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001090887.1| elongation factor 1-alpha 1 [Sus scrofa].         462   e-130
Alignment   gi|XP_003129826.1| PREDICTED: elongation factor 1-alpha, oocyte...   408   e-114
Alignment   gi|XP_003124639.2| PREDICTED: eukaryotic peptide chain release ...   102   3e-22
Alignment   gi|XP_003135149.1| PREDICTED: eukaryotic peptide chain release ...   102   5e-22
Alignment   gi|XP_003124563.1| PREDICTED: elongation factor Tu, mitochondri...    81   9e-16
Alignment   gi|XP_003357741.1| PREDICTED: elongation factor 1-alpha 1-like ...    64   2e-10
Alignment   gi|XP_003126063.2| PREDICTED: GTP-binding protein 1 [Sus scrofa].     56   3e-08

>ref|NP_001090887.1| elongation factor 1-alpha 1 [Sus scrofa].
          Length = 462

 Score =  462 bits (1188), Expect = e-130
 Identities = 225/225 (100%), Positives = 225/225 (100%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 208 MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 267

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG
Sbjct: 268 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 327

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL
Sbjct: 328 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 387

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT
Sbjct: 388 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 432


>ref|XP_003129826.1| PREDICTED: elongation factor 1-alpha, oocyte form-like [Sus
           scrofa].
          Length = 461

 Score =  408 bits (1048), Expect = e-114
 Identities = 196/225 (87%), Positives = 209/225 (92%)
 Frame = +2

Query: 2   MPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRV 181
           MPWFKGWKV RK+GNA+G TLLEALD ILPPTRP +KPLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 208 MPWFKGWKVERKEGNATGVTLLEALDSILPPTRPVNKPLRLPLQDVYKIGGIGTVPVGRV 267

Query: 182 ETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAG 361
           ETG LK GMVVTFAP NVTTEVKSVEMHHEAL+EALPGDNVGFNVKNVSVKD+RRGNVAG
Sbjct: 268 ETGFLKAGMVVTFAPNNVTTEVKSVEMHHEALAEALPGDNVGFNVKNVSVKDIRRGNVAG 327

Query: 362 DSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKL 541
           DSKNDPPMEA+ F AQVI+LNHPGQI AGY+PVLDCHTAHI+CKFAEL+EK+DRRSGKKL
Sbjct: 328 DSKNDPPMEASSFVAQVIVLNHPGQIHAGYSPVLDCHTAHISCKFAELREKMDRRSGKKL 387

Query: 542 EDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           ED PK LKSGDAA+V MVP K MCVE+FS YPPLGRFAVRDMRQT
Sbjct: 388 EDNPKALKSGDAAMVQMVPSKAMCVETFSQYPPLGRFAVRDMRQT 432


>ref|XP_003124639.2| PREDICTED: eukaryotic peptide chain release factor GTP-binding
           subunit ERF3A-like [Sus scrofa].
          Length = 561

 Score =  102 bits (255), Expect = 3e-22
 Identities = 61/208 (29%), Positives = 101/208 (48%)
 Frame = +2

Query: 53  GTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVN 232
           G   +  LD +    R  D P+RLP+ D YK   +GTV +G++E+G +  G  +   P  
Sbjct: 343 GLPFIPYLDNLPNFNRSVDGPIRLPIVDKYK--DMGTVVLGKLESGSICKGQQLVMMPNK 400

Query: 233 VTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQV 412
              EV  +           PG+N+   +K +  +++  G +  D  N+       F AQ+
Sbjct: 401 HNVEVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDP-NNLCHSGRTFDAQI 459

Query: 413 IILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDM 592
           +I+ H   I  GY  VL  HT     +   L   +D++SG+K +  P+F+K     I  +
Sbjct: 460 VIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARL 519

Query: 593 VPGKPMCVESFSDYPPLGRFAVRDMRQT 676
                +C+E+F D+P +GRF +RD  +T
Sbjct: 520 RTAGTICLETFKDFPQMGRFTLRDEGKT 547


>ref|XP_003135149.1| PREDICTED: eukaryotic peptide chain release factor GTP-binding
            subunit ERF3B-like [Sus scrofa].
          Length = 632

 Score =  102 bits (253), Expect = 5e-22
 Identities = 60/209 (28%), Positives = 101/209 (48%)
 Frame = +2

Query: 50   SGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPV 229
            +G   +  LD +    R  D P+RLP+ D YK   +GTV +G++E+G +  G  +   P 
Sbjct: 413  TGLPFIPYLDNMPNFNRSIDGPIRLPIVDKYK--DMGTVVLGKLESGSIFKGQQLVMMPN 470

Query: 230  NVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQ 409
                EV  +           PG+N+   +K +  +++  G +  D  N+       F  Q
Sbjct: 471  KHNVEVLGILSDDAETDYVAPGENLKIRLKGIEEEEILPGFILCDP-NNLCHSGRTFDVQ 529

Query: 410  VIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVD 589
            ++I+ H   I  GY  VL  HT     +   L   +D++SG+K +  P+F+K     I  
Sbjct: 530  IVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIAR 589

Query: 590  MVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
            +     +C+E+F D+P +GRF +RD  +T
Sbjct: 590  LRTAGTICLETFKDFPQMGRFTLRDEGKT 618


>ref|XP_003124563.1| PREDICTED: elongation factor Tu, mitochondrial-like [Sus scrofa].
          Length = 452

 Score = 81.3 bits (199), Expect = 9e-16
 Identities = 70/221 (31%), Positives = 103/221 (46%), Gaps = 9/221 (4%)
 Frame = +2

Query: 41  GNASGTTLLEALDCILP-PTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVT 217
           G  S   LL+A+D  +P PTR  +KP  LP++ VY I G GTV  G +E G+LK G    
Sbjct: 232 GLKSVQKLLDAVDTYIPVPTRDLEKPFLLPVESVYSIPGRGTVVTGTLERGILKKGDECE 291

Query: 218 FA--PVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEA 391
           F     N+ T V  +EM H++L  A  GDN+G  V+ +  +D+RRG V   +K       
Sbjct: 292 FLGHSKNIRTVVTGIEMFHKSLERAEAGDNLGALVRGLKREDLRRGLVM--AKPGSIQTH 349

Query: 392 AGFTAQVIILN------HPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGP 553
               AQV IL+      H   +S  + PV+   T  +AC+               L  G 
Sbjct: 350 QKVEAQVYILSKEEGGRHKPFVS-HFMPVMFSLTWDMACRII-------------LPQGK 395

Query: 554 KFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           +    G+   + ++  +PM +E         RF +RD  +T
Sbjct: 396 ELAMPGEDLKLTLILRQPMILEKGQ------RFTLRDGNRT 430


>ref|XP_003357741.1| PREDICTED: elongation factor 1-alpha 1-like [Sus scrofa].
          Length = 59

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 28/29 (96%), Positives = 29/29 (100%)
 Frame = +2

Query: 590 MVPGKPMCVESFSDYPPLGRFAVRDMRQT 676
           MVPGKPMCVESFS+YPPLGRFAVRDMRQT
Sbjct: 1   MVPGKPMCVESFSEYPPLGRFAVRDMRQT 29


>ref|XP_003126063.2| PREDICTED: GTP-binding protein 1 [Sus scrofa].
          Length = 583

 Score = 56.2 bits (134), Expect = 3e-08
 Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 4/165 (2%)
 Frame = +2

Query: 107 DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVN----VTTEVKSVEMHHEA 274
           ++P    + D Y + G+GTV  G    G++K    +   P      ++  VKS+      
Sbjct: 306 EEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLNDTLLLGPDPLGNFLSIAVKSIHRKRMP 365

Query: 275 LSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYA 454
           + E   G    F +K +    +R+G V    + + P  +  F A++++L+HP  IS  Y 
Sbjct: 366 VKEVRGGQTASFALKKIKRSSIRKGMVMVSPRLN-PQASWEFEAEILVLHHPTTISPRYQ 424

Query: 455 PVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVD 589
            ++ C +         + +K   R+G K     +F+K+ +   +D
Sbjct: 425 AMVHCGSIRQTATILSM-DKDCLRTGDKATVHFRFIKTPEYLHID 468


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 27,031,751
Number of extensions: 796518
Number of successful extensions: 2071
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 2063
Number of HSP's successfully gapped: 7
Length of query: 372
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 272
Effective length of database: 8,854,232
Effective search space: 2408351104
Effective search space used: 2408351104
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001126
         (1118 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr10                                                        1304   0.0  
Sscrofa_Chr16                                                        1199   0.0  
Sscrofa_Chr04                                                        1005   0.0  
Sscrofa_Chr01                                                         993   0.0  
Sscrofa_Chr15                                                         837   0.0  
Sscrofa_ChrX                                                          684   0.0  
Sscrofa_Chr02                                                         551   e-154
Sscrofa_Chr12                                                         527   e-147
Sscrofa_Chr13                                                         414   e-113
Sscrofa_Chr07                                                         377   e-102

>Sscrofa_Chr10 
||          Length = 79102373

 Score = 1304 bits (658), Expect = 0.0
 Identities = 697/710 (98%)
 Strand = Plus / Plus

                                                                            
Query: 344      cgtggcaatgtggctggtgacagcaaaaatgacccacctatggaagcagctggctttaca 403
                ||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 29315076 cgtggcattgtggctggtgacagcaaaaatgacccaccgatggaaccagctggctttaca 29315135

                                                                            
Query: 404      gctcaggtgattatcctgaaccatcctggccagatcagtgctggttacgcacctgtgctg 463
                ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 29315136 gctcaggtgattatcctgaactatcctggccagatcagtgctggttacgcacctgtgttg 29315195

                                                                            
Query: 464      gattgccacacagctcacattgcctgcaagtttgctgaactgaaggagaagattgatcgt 523
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 29315196 gattgccacacagctcacattgcctgcaagtttgctgaactgaaggagaagattgatttt 29315255

                                                                            
Query: 524      cgttctgggaaaaagctggaagatggccccaagttcttgaaatctggtgatgctgccatt 583
                ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 29315256 cgttctgggaaaaagctggaagacggccccaagttcttgaaatctggtgatgctgccatt 29315315

                                                                            
Query: 584      gtcgatatggttcctggcaagcccatgtgtgttgagagcttctctgactatcctcctctg 643
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 29315316 gtcgatatggttcctggcaagcccatgtgtgttgagagcttctctgagtatcctcctctg 29315375

                                                                            
Query: 644      ggccgatttgctgttcgtgacatgagacagacagttgctgtgggtgtcatcaaagctgtg 703
                ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 29315376 ggccgttttgctgttcgtgacatgagacagacagttgctatgggtgtcatcaaagctgtg 29315435

                                                                            
Query: 704      gacaagaaggcagctggagctggcaaggtcaccaagtctgctcagaaagctcagaaggct 763
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29315436 gacaagaaggcagctggagctggcaaggtcaccaagtctgctcagaaagctcagaaggct 29315495

                                                                            
Query: 764      aaatgaatattatccccaatacctgccaccccagtcttaatcagtggtggaagaacggtc 823
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29315496 aaatgaatattatccccaatacctgccaccccagtcttaatcagtggtggaagaacggtc 29315555

                                                                            
Query: 824      tcagaactgtttgtctcaattggccatttaagtttaatagtaaaagactggttaatgata 883
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29315556 tcagaactgtttgtctcaattggccatttaagtttaatagtaaaagactggttaatgata 29315615

                                                                            
Query: 884      acaatgcatcgtaaaaccttcagaaggaaaggagaatgttttgtggaccatttgttttgt 943
                ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29315616 acaatgcattgtaaaaccttcagaaggaaaggagaatgttttgtggaccatttgttttgt 29315675

                                                                            
Query: 944      gtgtggcagtttttaagttattagtttttaaaatcagtactttttaatggaaacaacttg 1003
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29315676 gtgtggcagtttttaagttattagtttttaaaatcagtactttttaatggaaacaacttg 29315735

                                                                  
Query: 1004     accaaaaatctgtcacagaattttgagacccattaaaaaaagtttaatga 1053
                |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 29315736 accaaaaatctgtcgcagaattttgagacccattaaaaaaagtttaatga 29315785


>Sscrofa_Chr16 
||          Length = 86898991

 Score = 1199 bits (605), Expect = 0.0
 Identities = 778/835 (93%), Gaps = 8/835 (0%)
 Strand = Plus / Plus

                                                                            
Query: 221      gctccagtcaatgttacaactgaagtcaagtctgttgaaatgcaccatgaagctttgagt 280
                |||||||| ||||||||||||||||  | |||||||||||||||||||||||||| | ||
Sbjct: 75371586 gctccagtaaatgttacaactgaagggaggtctgttgaaatgcaccatgaagcttggggt 75371645

                                                                            
Query: 281      gaagcccttcctggggacaacgtgggctttaatgtcaaaaacgtgtctgtcaaagacgtt 340
                ||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||| |||
Sbjct: 75371646 gaagcccttcctggggacaacatggtctttaatgtcaagaacgtgtctgtcaaagatgtt 75371705

                                                                            
Query: 341      cgtcgtggcaatgtggctggtgacagcaaaaatgacccacctatggaagcagctggcttt 400
                | | ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 75371706 cattgtggcaacgtggctggtgacagcaaaaatgacccaccaatggaagcagctggcttt 75371765

                                                                            
Query: 401      acagctcaggtgattatcctgaaccatcctggccagatcagtgctggttacgcacctgtg 460
                |||||||||||||||||  |||||| ||||||||| ||||||||||| ||||||||||||
Sbjct: 75371766 acagctcaggtgattatattgaaccctcctggccaaatcagtgctggatacgcacctgtg 75371825

                                                                            
Query: 461      ctggattgccacacagctcacattgcctgcaagtttgctgaactgaaggagaagattgat 520
                ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 75371826 ctggattgccacacagctcacattgcccgcaagtttgttgaactgaaggagaagattgat 75371885

                                                                            
Query: 521      cgtcgttctgggaaaaagctggaagatggccccaagttcttgaaatctggtgatgctgcc 580
                   | ||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||
Sbjct: 75371886 taccattctgggaaaaagctggaagagggccccaagttctttaaacctggtgatgctgcc 75371945

                                                                            
Query: 581      attgtcgatatggttcctggcaagcccatgtgtgttgagagcttctctgactatcctcct 640
                || || |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 75371946 atcgttgatatggttcctggcaagcccaggtgtgttgagagcttctctgactatcctcct 75372005

                                                                            
Query: 641      ctgggccgatttgctgttcgtgacatgagacagacagttgctgtgggtgtcatcaaagct 700
                |||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 75372006 ctgggccattttgctgttcgtgacatgagacagacggttgctgtgggtgtcatcaaagcg 75372065

                                                                            
Query: 701      gtggacaagaaggcagctggagctggcaaggtcaccaagtctgctcagaaagctcagaag 760
                |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 75372066 gtggacaagaaggcagctggagctggcaaggtcaccaagtctgctcaggaagcttagaag 75372125

                                                                            
Query: 761      gctaaatgaatattatccccaatacctgccaccccagtcttaatcagtggtggaagaacg 820
                |||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||| 
Sbjct: 75372126 gctaaatgaatattattcccactacctcccaccccagtcttaatcagtggtggaagaaca 75372185

                                                                            
Query: 821      gtctcagaactgtttgtctcaattggccatttaagtttaatagtaaaagactggttaatg 880
                ||||||||||| |||||| |||| |||||||||||||||| ||||||||||||||||| |
Sbjct: 75372186 gtctcagaactctttgtcgcaataggccatttaagtttaacagtaaaagactggttaaag 75372245

                                                                            
Query: 881      ataacaatgcatcgtaaaaccttcagaaggaaaggagaatgttttgtggaccatttgttt 940
                |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 75372246 ataacaatgcatcgtaaaaccttcagaaggaaaggagaatgttttgtggactctttgttt 75372305

                                                                            
Query: 941      tgtgtgtggcagtttttaagttattagtttttaaaatcagtactttttaatggaaacaac 1000
                ||||||||||||||      ||||||||||||||||||||||||||||||||||||||||
Sbjct: 75372306 tgtgtgtggcagtt------ttattagtttttaaaatcagtactttttaatggaaacaac 75372359

                                                                       
Query: 1001     ttgaccaaaaatctgtcacagaattttgagacccatt--aaaaaaagtttaatga 1053
                ||||||||||||||||| |||||||||||||||||||  ||||||||||||||||
Sbjct: 75372360 ttgaccaaaaatctgtctcagaattttgagacccattcaaaaaaaagtttaatga 75372414


>Sscrofa_Chr04 
||          Length = 143465943

 Score = 1005 bits (507), Expect = 0.0
 Identities = 884/1010 (87%), Gaps = 31/1010 (3%)
 Strand = Plus / Plus

                                                                            
Query: 13       caagggatggaaagtcacccgtaaagatggcaatgccagtggaaccacactgcttgaagc 72
                ||||||||||||||||||| ||||||||| ||| |||||| ||||||| |||||||||||
Sbjct: 97803372 caagggatggaaagtcacctgtaaagatgacaaagccagtagaaccacgctgcttgaagc 97803431

                                                                            
Query: 73       tctggattgcattctaccaccaactcgtccaactgacaagcccttgcgcctgcccctcca 132
                |||| ||||||| || ||||||| ||| |||  ||||||||||||||  ||  |||||||
Sbjct: 97803432 tctgaattgcatcctgccaccaattcggccagttgacaagcccttgcatctatccctcca 97803491

                                                                            
Query: 133      ggacgtctacaaaattggtggtattggtacagtccctgtgggccgagtggagaccggtgt 192
                ||| |||||||||||||||| |||| |||| ||||   ||||  ||||||||||  ||||
Sbjct: 97803492 ggatgtctacaaaattggtgatatttgtactgtcctcttgggttgagtggagactagtgt 97803551

                                                                            
Query: 193      tctcaaacctggcatggtggtcacctttgctccagtcaatgttacaactgaagtcaagtc 252
                || ||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||| 
Sbjct: 97803552 tcccaaacctggcatggtagtcacctttgctccagtcaatgtcacaactgaagtaaagtt 97803611

                                                                            
Query: 253      tgttgaaatgcaccatgaagctttgagtgaagcccttcctggggacaacgtgggctttaa 312
                ||||||| ||| |||||||||||||||| ||| | |||||||||||||| |||||||  |
Sbjct: 97803612 tgttgaactgctccatgaagctttgagtcaagactttcctggggacaacatgggcttcga 97803671

                                                                            
Query: 313      tgtcaaaaacgtgtctgtcaaagacgttcgtcgtggcaatgtggctggtgacagcaaaaa 372
                || ||| | | ||||||||||||| |||| | ||||||||||||||||||||||||||||
Sbjct: 97803672 tggcaagagcttgtctgtcaaagatgttccttgtggcaatgtggctggtgacagcaaaaa 97803731

                                                                            
Query: 373      tgacccacctatggaagcagctggctttacagctcaggtgattatcctgaaccatcctgg 432
                ||||| |   |||||| |||||||||||| |      ||||||||| |||||||||||| 
Sbjct: 97803732 tgaccta---atggaaacagctggctttataa-----gtgattatcttgaaccatcctga 97803783

                                                                            
Query: 433      ccagatcagtgctggttacgcacctgtgctggattgccacacagctcacattgcctgcaa 492
                ||| ||||||||||| || ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 97803784 ccaaatcagtgctggatatgcacctgtgctagattgccacacagctcacattgcctgcaa 97803843

                                                                            
Query: 493      gtttgctgaactgaaggagaagattgatcgtcgttctgggaaaaagctggaagatggccc 552
                ||||||||||||||||||||  |   |||||| ||||||||||||||  | ||||| |||
Sbjct: 97803844 gtttgctgaactgaaggagatca---atcgtcattctgggaaaaagccaggagatgcccc 97803900

                                                                            
Query: 553      caagttcttgaaatctggtgatgctgccattgtcgatatggttcctggcaagcccatgtg 612
                  |||| |||||||||||||||||||||||  | || ||||||| || ||||||||||| 
Sbjct: 97803901 tgagtt-ttgaaatctggtgatgctgccatcattgacatggttcttgacaagcccatgta 97803959

                                                                            
Query: 613      tgttgagagcttctctgactatcctcctctgggccgatttgctgttcgtgacatgagaca 672
                ||||||||||||||||||||||||||| |||||| | ||||||||| |||||||||||||
Sbjct: 97803960 tgttgagagcttctctgactatcctccgctgggcggttttgctgtttgtgacatgagaca 97804019

                                                                            
Query: 673      gacagttgctgtgggtgtcatcaaagctgtggacaagaaggcagctggagctggcaaggt 732
                |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| 
Sbjct: 97804020 gacagttgctgtaggtgtcatcaaagcagtggacaagaaggcagctggagctggcaagga 97804079

                                                                            
Query: 733      caccaagtctgctcagaaagctcagaaggctaaatgaatattatccccaatacctgccac 792
                || |||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||
Sbjct: 97804080 caacaagtctgctcagaaagctcagaaggctaaatgaatgttatcgccaatatctgccac 97804139

                                                                            
Query: 793      cccagtcttaatcagtggtggaagaacggtctcagaactgtttgtctcaattggccattt 852
                ||||| |||||| |||||| ||||||  ||||||||| | ||||||||||||||||||||
Sbjct: 97804140 cccaggcttaattagtggtagaagaaatgtctcagaaatatttgtctcaattggccattt 97804199

                                                                            
Query: 853      aagtttaatagtaaaagactggttaatgataacaatgcatcgtaaaaccttcagaaggaa 912
                |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||   
Sbjct: 97804200 aagtttaatagtaaaagactggttaatgataacaatgcattgtaaaaacttcagaag--- 97804256

                                                                            
Query: 913      aggagaatgttttgtggaccatttgttttgtgtgtggcagtttttaagttattagttttt 972
                         ||||||||||||||||||||||||||||||||||        |||||||||
Sbjct: 97804257 --------attttgtggaccatttgttttgtgtgtggcagttt--------ttagttttt 97804300

                                                                  
Query: 973      aaaatcagtactttttaatggaaacaacttgaccaaaaatctgtcacaga 1022
                |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 97804301 aaaatcagtactttttaatggaaacaacttaaccaaaaatctgtcacaga 97804350



 Score =  543 bits (274), Expect = e-152
 Identities = 618/722 (85%), Gaps = 28/722 (3%)
 Strand = Plus / Minus

                                                                             
Query: 324       tgtctgtcaaagacgttcgtcgtggcaatgtggctggtgacagcaaaaatgacccaccta 383
                 |||||||||||||| ||| || ||| | || |||| |||||||| ||||||||||||  |
Sbjct: 119617951 tgtctgtcaaagacattcctcatggaagtgcggctagtgacagcgaaaatgacccaca-a 119617893

                                                                             
Query: 384       tggaagcagctggctttacagctcaggtgattatcctgaaccatcctggccagatcagtg 443
                 ||||||||||||||||||| ||| || |||||||| |||| ||||| ||| ||||     
Sbjct: 119617892 tggaagcagctggctttacggctaagatgattatcttgaaacatccaggctagatac--- 119617836

                                                                             
Query: 444       ctggttacgcacctgtgctggattgccacacagctcacattgcctgcaagtttgctgaac 503
                       || ||||||||||||| || ||||||||||||| ||| ||||||||||||||| 
Sbjct: 119617835 ------ac-cacctgtgctggactgtcacacagctcacactgcttgcaagtttgctgaaa 119617783

                                                                             
Query: 504       tgaaggagaagattgatcgtcgttctgggaaaaagctggaagatggccccaagttcttga 563
                 |||||   | ||||     || ||||| |||||||||||||||||||||||| |||||||
Sbjct: 119617782 tgaag---acgatta----tcattctgagaaaaagctggaagatggccccaaattcttga 119617730

                                                                             
Query: 564       aatctggtgatgctgccattgtcgatatggttcctggcaagcccatgtgtgttgagagct 623
                 |||||| ||||| || |||  | ||||  ||| |||||||||||||||||||||||||||
Sbjct: 119617729 aatctgatgatggtgtcatcattgatacagtttctggcaagcccatgtgtgttgagagct 119617670

                                                                             
Query: 624       tctctgactatcctcctctgggccgatttgctgttcgtgacatgagacagacagttgctg 683
                 |||||||||||| |||||||||| | ||||||||| |||||  |||||| |  ||| |||
Sbjct: 119617669 tctctgactatcttcctctgggctgttttgctgtttgtgac--gagacaaatggtttctg 119617612

                                                                             
Query: 684       tgggtgtcatcaaagctgtggacaagaaggcagctggagctggcaaggtcaccaagtctg 743
                 |  ||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 119617611 tacgtgtcatcaaagcagtggacaagaaggcagctagagctggtaaggtcaccaagtctg 119617552

                                                                             
Query: 744       ctcagaaagctcagaaggctaaatgaatattatccccaatacctgccaccccagtcttaa 803
                 ||||||||||||||||| ||| ||||||||||||||||| || |||| |||||| |||||
Sbjct: 119617551 ctcagaaagctcagaagtctacatgaatattatccccaacacttgcc-ccccaggcttaa 119617493

                                                                             
Query: 804       tcagtggtggaagaacggtctcagaactgtttgtctcaattggccatttaagtttaatag 863
                 |||    ||||||||| |||||||||||||||||||||||||| ||  ||||||||||||
Sbjct: 119617492 tca---atggaagaactgtctcagaactgtttgtctcaattggtcacgtaagtttaatag 119617436

                                                                             
Query: 864       taaaagactggttaatgataacaatgcatcgtaaaaccttcagaaggaaaggagaatgtt 923
                 ||||| | |||||||||||||  ||||||| |||||  |||||||||||| |||||||||
Sbjct: 119617435 taaaatattggttaatgataatgatgcatcataaaatattcagaaggaaa-gagaatgtt 119617377

                                                                             
Query: 924       ttgtggaccatttgttttgtgtgtggcagtttttaagttattagtttttaaaatcagtac 983
                 || | ||||||||||||||||| |||||| |||||||||||||| |||||||||||| ||
Sbjct: 119617376 ttatagaccatttgttttgtgtatggcag-ttttaagttattag-ttttaaaatcagcac 119617319

                                                                             
Query: 984       tttttaatggaaacaacttgaccaaaaatctgtcacagaattttgagacccattaaaaaa 1043
                 ||||||| |||||||  ||||| ||||||||||||||| |||||||||||||||| ||||
Sbjct: 119617318 tttttaaaggaaacagtttgactaaaaatctgtcacag-attttgagacccattagaaaa 119617260

                   
Query: 1044      ag 1045
                 ||
Sbjct: 119617259 ag 119617258



 Score =  391 bits (197), Expect = e-106
 Identities = 402/468 (85%), Gaps = 13/468 (2%)
 Strand = Plus / Plus

                                                                            
Query: 509      gagaagattgatcgtcgttctgggaaaaagctggaagatggccccaagttcttgaaatct 568
                |||||||||| || | ||| ||||||||||||||||||| | ||||  |||||||||| |
Sbjct: 35747907 gagaagattggtccttgttttgggaaaaagctggaagatagtcccagattcttgaaatgt 35747966

                                                                            
Query: 569      ggtgatgctgccattgtcgatatggttcctggcaagcccatgtgtgttgagagcttctct 628
                |||||||||| ||| || | |||||||||||| |||||||| |||||||||||||||| |
Sbjct: 35747967 ggtgatgctgtcatcgttgttatggttcctggtaagcccatttgtgttgagagcttcttt 35748026

                                                                            
Query: 629      gactatcctcctctgggccgatttgctgttcgtgacatgagacagacagttgctgtgggt 688
                ||||||||||   ||||||  ||||||||| |||||| ||||||||  |||| |||||||
Sbjct: 35748027 gactatcctc---tgggccattttgctgttggtgacaagagacagatggttggtgtgggt 35748083

                                                                            
Query: 689      gtcatcaaagctgtggacaagaaggcagctggagctggcaaggtcaccaagtctgctcag 748
                ||||||||||| |||||  ||||| ||| |||||||||||||||||||| |||| | |||
Sbjct: 35748084 gtcatcaaagcagtggatgagaagacagttggagctggcaaggtcaccaggtctacccag 35748143

                                                                            
Query: 749      aaagctcagaaggctaaatgaatattatccccaatacctgccaccccagtcttaatcagt 808
                ||  || || ||||||||||||||| |        || |||||   ||||||||| ||||
Sbjct: 35748144 aagactgaggaggctaaatgaatatcac-------acttgccattgcagtcttaaacagt 35748196

                                                                            
Query: 809      ggtggaagaacggtctcagaactgtttgtctcaattggccatttaagtttaatagtaaaa 868
                |||||||||| |||||||||||||||  ||||||  ||||||| ||||||| ||| ||||
Sbjct: 35748197 ggtggaagaatggtctcagaactgttgatctcaaccggccatt-aagtttagtagcaaaa 35748255

                                                                            
Query: 869      gactggttaatgataacaatgcatcgtaaaaccttcagaaggaaaggagaatgttttgtg 928
                ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35748256 gactggttaatgatagcaatgcatcgtaaaaccttcagaaggaaaggagaatgttttgtg 35748315

                                                                
Query: 929      gaccatttgttttgtgtgtggcagtttttaagttattagtttttaaaa 976
                |||  ||||||||||||||||||  |||||||||||||||||| ||||
Sbjct: 35748316 gactgtttgttttgtgtgtggca--ttttaagttattagttttaaaaa 35748361



 Score =  377 bits (190), Expect = e-102
 Identities = 481/575 (83%), Gaps = 6/575 (1%)
 Strand = Plus / Plus

                                                                            
Query: 202      tggcatggtggtcacctttgctccagtca-atgttacaactgaagtcaagtctgttgaaa 260
                ||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 91658534 tggcaaggtggtcacctttgctccagtcagatgttacaactgaagtaaagtctgttgaaa 91658593

                                                                            
Query: 261      tgcaccatgaagctttgagtgaagcccttcctggggacaacgtgggctttaatgtcaaaa 320
                || ||||||||||||||||  |||| ||||||||||| || |||||||| | |||||| |
Sbjct: 91658594 tgtaccatgaagctttgagaaaagctcttcctggggaaaatgtgggcttcattgtcaaga 91658653

                                                                            
Query: 321      acgtgtctgtcaaagacgttcgtcgtggcaatgtggctggtgacagcaaaaatgacccac 380
                | |||||||||||||| |||| || ||||| ||||||||| ||||| ||||||||| |||
Sbjct: 91658654 atgtgtctgtcaaagatgttcatcctggcagtgtggctggcgacagtaaaaatgactcac 91658713

                                                                            
Query: 381      ctatggaagcagctggctttacagctcaggtgattatcctgaaccatcctggccagatca 440
                   || | ||||||| ||| |||| ||| ||||||||  ||| |||||| || || ||||
Sbjct: 91658714 tgttgaaggcagctgtcttcacaggtcaagtgattatattgagccatccaggtcaaatca 91658773

                                                                            
Query: 441      gtgctggttacgcacctgtgctggattgccacacagctcacattgcctgcaagtttgctg 500
                ||||||| || ||||||||||||||||  |||| ||||  ||||   |||| || |  ||
Sbjct: 91658774 gtgctggatatgcacctgtgctggattatcacagagct--cattatttgcaggtctcttg 91658831

                                                                            
Query: 501      aactgaaggagaagattgatcgtcgttctgggaaaaagctggaagatggccccaagttct 560
                  ||||||||||||||||||| |  |||| || ||||| || ||   | |||||| ||||
Sbjct: 91658832 ggctgaaggagaagattgatcattattctagggaaaagatgcaa---gtccccaaattct 91658888

                                                                            
Query: 561      tgaaatctggtgatgctgccattgtcgatatggttcctggcaagcccatgtgtgttgaga 620
                || |||||||| ||| | |    || | ||||||||||||||||||||||| ||||||||
Sbjct: 91658889 tggaatctggttatggtactggggttggtatggttcctggcaagcccatgtatgttgaga 91658948

                                                                            
Query: 621      gcttctctgactatcctcctctgggccgatttgctgttcgtgacatgagacagacagttg 680
                |||||||||||||||||| |||| |||  ||||||||| ||||||| |||  ||  ||||
Sbjct: 91658949 gcttctctgactatcctcttctgagccattttgctgtttgtgacattagattgatggttg 91659008

                                                                            
Query: 681      ctgtgggtgtcatcaaagctgtggacaagaaggcagctggagctggcaaggtcaccaagt 740
                |  ||||| |||||||||| ||||||||| |||||||||||||||||||||||  |||||
Sbjct: 91659009 ccatgggtctcatcaaagcggtggacaaggaggcagctggagctggcaaggtcgtcaagt 91659068

                                                   
Query: 741      ctgctcagaaagctcagaaggctaaatgaatatta 775
                |||| ||||||||| |||||| |||||||||||||
Sbjct: 91659069 ctgcccagaaagcttagaaggttaaatgaatatta 91659103



 Score =  260 bits (131), Expect = 1e-66
 Identities = 255/295 (86%), Gaps = 1/295 (0%)
 Strand = Plus / Minus

                                                                             
Query: 35        aaagatggcaatgccagtggaaccacactgcttgaagctctggattgcattctaccacca 94
                 |||||||| ||||||| |||||| ||||| ||||||||||| ||| |||| || ||| ||
Sbjct: 119618517 aaagatggtaatgccaatggaactacactacttgaagctcttgatcgcatcctgccatca 119618458

                                                                             
Query: 95        actcgtccaactgacaagcccttgcgcctgcccctccaggacgtctacaaaattggtggt 154
                 || | |||||||||||||||||| |  ||| || ||||||||| ||||||||||||| ||
Sbjct: 119618457 acacatccaactgacaagcccttacatctgtcc-tccaggacgcctacaaaattggtagt 119618399

                                                                             
Query: 155       attggtacagtccctgtgggccgagtggagaccggtgttctcaaacctggcatggtggtc 214
                 | | ||||  |||||||||| |  ||| |||| |||||||||||| ||||||||||||||
Sbjct: 119618398 actagtactatccctgtgggtcaggtgaagactggtgttctcaaatctggcatggtggtc 119618339

                                                                             
Query: 215       acctttgctccagtcaatgttacaactgaagtcaagtctgttgaaatgcaccatgaagct 274
                 || | |||||||||||||||||||| |||||| |||| |||||||||| || ||||||||
Sbjct: 119618338 acttctgctccagtcaatgttacaagtgaagtaaagtttgttgaaatgtactatgaagct 119618279

                                                                        
Query: 275       ttgagtgaagcccttcctggggacaacgtgggctttaatgtcaaaaacgtgtctg 329
                 ||||||||| |||||||||||||||| |||||||| |||||||| ||| ||||||
Sbjct: 119618278 ttgagtgaaacccttcctggggacaatgtgggcttcaatgtcaagaacatgtctg 119618224



 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 140/172 (81%), Gaps = 1/172 (0%)
 Strand = Plus / Minus

                                                                            
Query: 717      ctggagctggcaaggtcaccaagtctgctcagaaagctcagaaggctaaatgaatattat 776
                |||||||| |||||||||||| ||||||||||||| |||| |||  ||| ||||||||||
Sbjct: 28882197 ctggagctagcaaggtcaccacgtctgctcagaaaactcaaaagtttaagtgaatattat 28882138

                                                                            
Query: 777      ccccaatacctgccaccccagtcttaatcagtggtg-gaagaacggtctcagaactgttt 835
                 |  || |||| ||||| ||  |||||||||| |||  || || ||||| | || | |||
Sbjct: 28882137 gcataacacctcccaccacaaccttaatcagtagtgtaaaaaatggtcttataattattt 28882078

                                                                    
Query: 836      gtctcaattggccatttaagtttaatagtaaaagactggttaatgataacaa 887
                || | |||||  |||||||||||||||||| | ||||  |||||||||||||
Sbjct: 28882077 gttttaattgatcatttaagtttaatagtagatgacttattaatgataacaa 28882026



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                          
Query: 1012     tctgtcacagaattttgagacccattaaaaaaagtttaatga 1053
                |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 97804598 tctgtcacagaattttgagacccatttaaaaaagtttaatga 97804639



 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                                
Query: 2         atgccttggttcaagggatggaaagtcacccgtaaagatggcaatgc 48
                 ||||||||||||||||||||||| |||| | ||||||||||||||||
Sbjct: 119618754 atgccttggttcaagggatggaaggtcagctgtaaagatggcaatgc 119618708



 Score = 61.9 bits (31), Expect = 7e-07
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                       
Query: 345      gtggcaatgtggctggtgacagcaaaaatgacccacctatggaagcagctggctt 399
                |||||||  |||||| ||||||  ||||||||||||| |||||||||||||||||
Sbjct: 28883528 gtggcaacatggctgatgacagataaaatgacccaccaatggaagcagctggctt 28883474


>Sscrofa_Chr01 
||          Length = 315321322

 Score =  993 bits (501), Expect = 0.0
 Identities = 918/1046 (87%), Gaps = 17/1046 (1%)
 Strand = Plus / Minus

                                                                             
Query: 2         atgccttggttcaagggatggaaagtcacccgtaaagatggcaatgccagtggaaccaca 61
                 |||||||||||||||||||||||| |||||| |||| ||||||||||| || ||||||  
Sbjct: 119676532 atgccttggttcaagggatggaaattcacccataaa-atggcaatgccggtagaaccatg 119676474

                                                                             
Query: 62        ctgcttgaagctctggattgcattctaccaccaactcgtccaactgacaagcccttgcgc 121
                  || |||||||||||||||||||  | ||||||||| ||||||||||||| |||| | | 
Sbjct: 119676473 ttgtttgaagctctggattgcatcttgccaccaacttgtccaactgacaaaccct-gtgt 119676415

                                                                             
Query: 122       ctgcccctccaggacgtctacaaaattggtggtattggtacagtccctgtgggccgagtg 181
                 ||||||||| || ||||||||||||||||||| || | ||| |||| || | ||  | ||
Sbjct: 119676414 ctgcccctctagaacgtctacaaaattggtggcatggatactgtccatgggtgc--aatg 119676357

                                                                             
Query: 182       gagaccggtgttctcaaacctggcatggtggtcacctttgctccagtcaatgttacaact 241
                  |||| ||  |||||||| |||||||| |||||||||||||||||||||||||||||| |
Sbjct: 119676356 tagactggcattctcaaatctggcatgatggtcacctttgctccagtcaatgttacaaat 119676297

                                                                             
Query: 242       gaagtcaagtctgttgaaatgcaccatgaagctttgagtgaagcccttcctggggacaac 301
                 ||||||||||||||||||||||| |||||||||||||||||||||||| |  ||||||| 
Sbjct: 119676296 gaagtcaagtctgttgaaatgca-catgaagctttgagtgaagccctttccagggacaat 119676238

                                                                             
Query: 302       gtgggctttaatgtcaaaaacgtgtctgtcaaagacgttcgtcgtggcaatgtggctggt 361
                 | |||||| | |||||  || |||||||||||| | |||| || ||||| | |||||| |
Sbjct: 119676237 gagggcttcagtgtcaggaatgtgtctgtcaaacatgttcatcatggcagtatggctgat 119676178

                                                                             
Query: 362       gacagcaaaaatgacccacctatggaagcagctggctttacagctcaggtgattatcctg 421
                   ||  |||||||||||||| | ||||||||||||| |||||||||||||||||||| ||
Sbjct: 119676177 atca-aaaaaatgacccaccaaaggaagcagctggccttacagctcaggtgattatcttg 119676119

                                                                             
Query: 422       aaccatcctggccagatcagtgctggttacgcacctgtgctggattgccacacagctcac 481
                 ||||||||||| || ||||||||| | || | ||||||||||||||| | ||||||||| 
Sbjct: 119676118 aaccatcctggtcaaatcagtgctagatatgtacctgtgctggattgtctcacagctcaa 119676059

                                                                             
Query: 482       attgcctgcaagtttgctgaactgaaggagaagattgatcgtcgttctgggaaaaagctg 541
                 ||||| |||||||||||||||||||   |||||||||||| || ||||||||||||||||
Sbjct: 119676058 attgcttgcaagtttgctgaactga---agaagattgatcatcattctgggaaaaagctg 119676002

                                                                             
Query: 542       gaagatggccccaagttcttgaaatctggtgatgctgccattgtcgatatggttcctggc 601
                 | |||||||||||| |||||||| |||||||||||| ||||||| |||| ||||||||| 
Sbjct: 119676001 ggagatggccccaaattcttgaactctggtgatgctaccattgttgatagggttcctggt 119675942

                                                                             
Query: 602       aagcccatgtgtgttgagagcttctctgactatcctcctctgggccgatttgctgttcgt 661
                 |||||||||||||||||||| ||||||||||||||||| ||| |||| |||||| ||| |
Sbjct: 119675941 aagcccatgtgtgttgagagtttctctgactatcctcccctgagccgttttgctcttcat 119675882

                                                                             
Query: 662       gacatgagacagacagttg---ctgtgggtgtcatcaaagctgtggacaagaaggcagct 718
                 |||||||||||||  || |   |||||| | |||||||||| ||| |||| |||||||||
Sbjct: 119675881 gacatgagacagatggtggtcactgtggttttcatcaaagcagtgaacaaaaaggcagct 119675822

                                                                             
Query: 719       ggagctggcaaggtcaccaagtctgctcagaaagctcagaaggctaaatgaatattatcc 778
                 |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||
Sbjct: 119675821 ggagctggcaaggtcaccaagtctgctcagaaagctcagaaatctaaatgaatattatcc 119675762

                                                                             
Query: 779       ccaatacctgccaccccagtcttaatcagtggtggaagaacggtctcagaactgtttgtc 838
                 ||||||  |||||||||||||||||||| |||| |||||| |||||||||||| ||||||
Sbjct: 119675761 ccaatatgtgccaccccagtcttaatcaatggtagaagaatggtctcagaactctttgtc 119675702

                                                                             
Query: 839       tcaattggccatttaagtttaatagtaaaagactggttaatgataacaatgcatcgtaaa 898
                 | ||||||||||||||||||||||||||||||||  |||||||||||    ||| |||||
Sbjct: 119675701 ttaattggccatttaagtttaatagtaaaagacttattaatgataac---ccattgtaaa 119675645

                                                                             
Query: 899       accttcagaaggaaaggagaatgttttgtggaccatttgttttgtgtgtggcagttttta 958
                 ||||||||||||||||||| ||||||||||||   ||||||||||||| ||||| ||| |
Sbjct: 119675644 accttcagaaggaaaggag-atgttttgtggaatgtttgttttgtgtgcggcag-tttca 119675587

                                                                             
Query: 959       agttattagtttttaaaatcagtactttttaatggaaacaacttgaccaaaaatctgtca 1018
                 ||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 119675586 agttattagttttaaaactcagtactttttaatgaaaacaacttgaccaaaaatctgtca 119675527

                                           
Query: 1019      cagaattttgagacccattaaaaaaa 1044
                 || |||||||||||||||||||||||
Sbjct: 119675526 caaaattttgagacccattaaaaaaa 119675501



 Score =  813 bits (410), Expect = 0.0
 Identities = 410/410 (100%)
 Strand = Plus / Plus

                                                                             
Query: 644       ggccgatttgctgttcgtgacatgagacagacagttgctgtgggtgtcatcaaagctgtg 703
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103477480 ggccgatttgctgttcgtgacatgagacagacagttgctgtgggtgtcatcaaagctgtg 103477539

                                                                             
Query: 704       gacaagaaggcagctggagctggcaaggtcaccaagtctgctcagaaagctcagaaggct 763
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103477540 gacaagaaggcagctggagctggcaaggtcaccaagtctgctcagaaagctcagaaggct 103477599

                                                                             
Query: 764       aaatgaatattatccccaatacctgccaccccagtcttaatcagtggtggaagaacggtc 823
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103477600 aaatgaatattatccccaatacctgccaccccagtcttaatcagtggtggaagaacggtc 103477659

                                                                             
Query: 824       tcagaactgtttgtctcaattggccatttaagtttaatagtaaaagactggttaatgata 883
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103477660 tcagaactgtttgtctcaattggccatttaagtttaatagtaaaagactggttaatgata 103477719

                                                                             
Query: 884       acaatgcatcgtaaaaccttcagaaggaaaggagaatgttttgtggaccatttgttttgt 943
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103477720 acaatgcatcgtaaaaccttcagaaggaaaggagaatgttttgtggaccatttgttttgt 103477779

                                                                             
Query: 944       gtgtggcagtttttaagttattagtttttaaaatcagtactttttaatggaaacaacttg 1003
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103477780 gtgtggcagtttttaagttattagtttttaaaatcagtactttttaatggaaacaacttg 103477839

                                                                   
Query: 1004      accaaaaatctgtcacagaattttgagacccattaaaaaaagtttaatga 1053
                 ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103477840 accaaaaatctgtcacagaattttgagacccattaaaaaaagtttaatga 103477889



 Score =  515 bits (260), Expect = e-143
 Identities = 260/260 (100%)
 Strand = Plus / Plus

                                                                             
Query: 152       ggtattggtacagtccctgtgggccgagtggagaccggtgttctcaaacctggcatggtg 211
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103476800 ggtattggtacagtccctgtgggccgagtggagaccggtgttctcaaacctggcatggtg 103476859

                                                                             
Query: 212       gtcacctttgctccagtcaatgttacaactgaagtcaagtctgttgaaatgcaccatgaa 271
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103476860 gtcacctttgctccagtcaatgttacaactgaagtcaagtctgttgaaatgcaccatgaa 103476919

                                                                             
Query: 272       gctttgagtgaagcccttcctggggacaacgtgggctttaatgtcaaaaacgtgtctgtc 331
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103476920 gctttgagtgaagcccttcctggggacaacgtgggctttaatgtcaaaaacgtgtctgtc 103476979

                                                                             
Query: 332       aaagacgttcgtcgtggcaatgtggctggtgacagcaaaaatgacccacctatggaagca 391
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103476980 aaagacgttcgtcgtggcaatgtggctggtgacagcaaaaatgacccacctatggaagca 103477039

                                     
Query: 392       gctggctttacagctcaggt 411
                 ||||||||||||||||||||
Sbjct: 103477040 gctggctttacagctcaggt 103477059



 Score =  472 bits (238), Expect = e-130
 Identities = 238/238 (100%)
 Strand = Plus / Plus

                                                                             
Query: 408       aggtgattatcctgaaccatcctggccagatcagtgctggttacgcacctgtgctggatt 467
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103477144 aggtgattatcctgaaccatcctggccagatcagtgctggttacgcacctgtgctggatt 103477203

                                                                             
Query: 468       gccacacagctcacattgcctgcaagtttgctgaactgaaggagaagattgatcgtcgtt 527
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103477204 gccacacagctcacattgcctgcaagtttgctgaactgaaggagaagattgatcgtcgtt 103477263

                                                                             
Query: 528       ctgggaaaaagctggaagatggccccaagttcttgaaatctggtgatgctgccattgtcg 587
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103477264 ctgggaaaaagctggaagatggccccaagttcttgaaatctggtgatgctgccattgtcg 103477323

                                                                           
Query: 588       atatggttcctggcaagcccatgtgtgttgagagcttctctgactatcctcctctggg 645
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103477324 atatggttcctggcaagcccatgtgtgttgagagcttctctgactatcctcctctggg 103477381



 Score =  305 bits (154), Expect = 3e-80
 Identities = 154/154 (100%)
 Strand = Plus / Plus

                                                                             
Query: 2         atgccttggttcaagggatggaaagtcacccgtaaagatggcaatgccagtggaaccaca 61
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103476562 atgccttggttcaagggatggaaagtcacccgtaaagatggcaatgccagtggaaccaca 103476621

                                                                             
Query: 62        ctgcttgaagctctggattgcattctaccaccaactcgtccaactgacaagcccttgcgc 121
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103476622 ctgcttgaagctctggattgcattctaccaccaactcgtccaactgacaagcccttgcgc 103476681

                                                   
Query: 122       ctgcccctccaggacgtctacaaaattggtggta 155
                 ||||||||||||||||||||||||||||||||||
Sbjct: 103476682 ctgcccctccaggacgtctacaaaattggtggta 103476715



 Score =  153 bits (77), Expect = 2e-34
 Identities = 313/389 (80%), Gaps = 2/389 (0%)
 Strand = Plus / Plus

                                                                             
Query: 132       aggacgtctacaaaattggtggt-attggtacagtccctgtgggccgagtggagaccggt 190
                 |||| |||||||||||||||| | |||||||| || |||| |||  |||||||||| |||
Sbjct: 139609921 aggatgtctacaaaattggtgattattggtactgttcctgggggttgagtggagactggt 139609980

                                                                             
Query: 191       gttctcaaacctggcatggtggtcacctttgctccagtcaatgttacaactgaagtcaag 250
                 | | |||||| || | |||||||  ||||||||||||||||   |||||||| ||| || 
Sbjct: 139609981 gctgtcaaacatgcc-tggtggttgcctttgctccagtcaacactacaactggagtaaat 139610039

                                                                             
Query: 251       tctgttgaaatgcaccatgaagctttgagtgaagcccttcctggggacaacgtgggcttt 310
                  ||||| |||| ||| |||||| ||||| ||| || |||| |||||| || ||||  || 
Sbjct: 139610040 cctgttcaaatacactatgaagttttgaatgaggctcttcttggggaaaatgtggatttc 139610099

                                                                             
Query: 311       aatgtcaaaaacgtgtctgtcaaagacgttcgtcgtggcaatgtggctggtgacagcaaa 370
                   |||||| || ||||||||||| || || | || ||||   | ||||||||| ||  ||
Sbjct: 139610100 ggtgtcaagaatgtgtctgtcaaggatgtccatcatggcgtcgaggctggtgatagtgaa 139610159

                                                                             
Query: 371       aatgacccacctatggaagcagctggctttacagctcaggtgattatcctgaaccatcct 430
                 ||||||||||| | ||||||||||||||| || | ||||||||||| ||||||||| || 
Sbjct: 139610160 aatgacccaccaagggaagcagctggcttcactgatcaggtgattaccctgaaccaccca 139610219

                                                                             
Query: 431       ggccagatcagtgctggttacgcacctgtgctggattgccacacagctcacattgcctgc 490
                 ||||| ||||| ||||| ||   ||||||||||||||| ||  || |||||||||  |||
Sbjct: 139610220 ggccaaatcagcgctggatataaacctgtgctggattgtcatgcaactcacattgtttgc 139610279

                                              
Query: 491       aagtttgctgaactgaaggagaagattga 519
                 ||||||||||| |||| | ||||| ||||
Sbjct: 139610280 aagtttgctgagctgaggaagaaggttga 139610308



 Score =  147 bits (74), Expect = 2e-32
 Identities = 110/122 (90%)
 Strand = Plus / Plus

                                                                            
Query: 678      ttgctgtgggtgtcatcaaagctgtggacaagaaggcagctggagctggcaaggtcacca 737
                ||||||||||||||| |||||| ||||||| ||||||||||||||||||||| |||||  
Sbjct: 97978365 ttgctgtgggtgtcaccaaagcagtggacacgaaggcagctggagctggcaaagtcactg 97978424

                                                                            
Query: 738      agtctgctcagaaagctcagaaggctaaatgaatattatccccaatacctgccaccccag 797
                 |||||| ||||||||||||||||| ||||||| || ||||||||||||||||| |||||
Sbjct: 97978425 tgtctgcacagaaagctcagaaggccaaatgaacatcatccccaatacctgccatcccag 97978484

                  
Query: 798      tc 799
                ||
Sbjct: 97978485 tc 97978486



 Score =  107 bits (54), Expect = 1e-20
 Identities = 79/86 (91%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                             
Query: 821       gtctcagaactgtttgtctcaattggccatttaagtttaatagtaaaagactggttaatg 880
                 ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 150535600 gtctcagaactgtttgtctcaattgaccatt-aagtttaatagtaaaagactggttaatg 150535542

                                           
Query: 881       ataacaatgcatcgtaaaaccttcag 906
                  ||| |||||||  ||||| ||||||
Sbjct: 150535541 gtaaaaatgcattataaaatcttcag 150535516



 Score = 85.7 bits (43), Expect = 5e-14
 Identities = 127/155 (81%)
 Strand = Plus / Plus

                                                                            
Query: 365      agcaaaaatgacccacctatggaagcagctggctttacagctcaggtgattatcctgaac 424
                ||||||||| |||||   ||||||||| ||||||| |||||||| |||||||||| || |
Sbjct: 97978039 agcaaaaataacccattaatggaagcaactggcttcacagctcaagtgattatccggagc 97978098

                                                                            
Query: 425      catcctggccagatcagtgctggttacgcacctgtgctggattgccacacagctcacatt 484
                ||||| |||||  | |||||  | |  |||||  | |||||||||| ||||| | |||||
Sbjct: 97978099 catccaggccaagttagtgccagctctgcaccctttctggattgccccacagtttacatt 97978158

                                                   
Query: 485      gcctgcaagtttgctgaactgaaggagaagattga 519
                || |||||||||||| | |||||||||||| ||||
Sbjct: 97978159 gcttgcaagtttgctaagctgaaggagaaggttga 97978193



 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                         
Query: 830       ctgtttgtctcaattggccatttaagtttaatagtaaaagactggttaatgataac 885
                 |||||| |||||| |||||||||||| ||||||||||||  ||| |||||||||||
Sbjct: 139610421 ctgtttctctcaactggccatttaagcttaatagtaaaattctgcttaatgataac 139610476



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 46/50 (92%), Gaps = 1/50 (2%)
 Strand = Plus / Plus

                                                                   
Query: 993       gaaacaacttgaccaaaaa-tctgtcacagaattttgagacccattaaaa 1041
                 ||||||||||||||||||| ||| || ||||||||||||| |||||||||
Sbjct: 172641814 gaaacaacttgaccaaaaaatctttctcagaattttgagatccattaaaa 172641863


>Sscrofa_Chr15 
||          Length = 157681621

 Score =  837 bits (422), Expect = 0.0
 Identities = 595/650 (91%), Gaps = 2/650 (0%)
 Strand = Plus / Minus

                                                                            
Query: 324      tgtctgtcaaagacgttcgtcgtggcaatgtggctggtgacagcaaaaatgacccaccta 383
                |||||||||||||  || |||||||   ||||||||||||||||||||||||||||   |
Sbjct: 28341730 tgtctgtcaaagatatttgtcgtggtggtgtggctggtgacagcaaaaatgacccatgga 28341671

                                                                            
Query: 384      tggaagcagctggctttacagctcaggtgattatcctgaaccatcctggccagatcagtg 443
                ||||| ||||||||||||||||||| ||||| ||| |||||||||||||||| ||  |||
Sbjct: 28341670 tggaaacagctggctttacagctcaagtgatcatcttgaaccatcctggccaaattggtg 28341611

                                                                            
Query: 444      ctggttacgcacctgtgctggattgccacacagctcacattgcctgcaagtttgctgaac 503
                 |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| 
Sbjct: 28341610 ttggttacgcacctgtgttggattgtcacacagctcacattgcttgcaagtttgctgaat 28341551

                                                                            
Query: 504      tgaaggagaagattgatcgtcgttctgggaaaaagctggaagatggccccaagttcttga 563
                ||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||
Sbjct: 28341550 tgaaggagaagattgattgttgttctgggaaaaagttggaagatggccccaagttcttga 28341491

                                                                            
Query: 564      aatctggtgatgctgccattgtcgatatggttcctggcaagcccatgtgtgttgagagct 623
                ||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||| ||
Sbjct: 28341490 aatctggtgatgctgccattgttaatatggttcctgggaagcccatgtgtgttgagaact 28341431

                                                                            
Query: 624      tctctgactatcctcctctgggccgatttgctgttcgtgacatgagacagacagttgctg 683
                | | ||||||||||||||||||| | |||||||| |||||||||||||||||||||||||
Sbjct: 28341430 tttttgactatcctcctctgggctgttttgctgtccgtgacatgagacagacagttgctg 28341371

                                                                            
Query: 684      tgggtgtcatcaaagctgtggacaagaaggcagctggagctggcaaggtcaccaagtctg 743
                ||||||||||| ||||||||||||||||| ||||||||||  ||||||||||||||||||
Sbjct: 28341370 tgggtgtcatctaagctgtggacaagaagtcagctggagccagcaaggtcaccaagtctg 28341311

                                                                            
Query: 744      ctcagaaagctcagaaggctaaatgaatattatccccaatacctgccaccccagtcttaa 803
                ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||
Sbjct: 28341310 ctcagaaagctcagaaggctaaatgaatattatccccaatacctgccagtccagttttaa 28341251

                                                                            
Query: 804      tcagtggtggaagaacggtctcagaactgtttgtctcaattggccatttaagtttaatag 863
                ||||||||| ||||| ||||||| |||||||||| |||| || ||||||| ||||| || 
Sbjct: 28341250 tcagtggtgaaagaatggtctcaaaactgtttgtttcaactgaccatttaggtttagtat 28341191

                                                                            
Query: 864      taaaagactggttaatgataacaatgcatcgtaaaaccttcagaa-ggaaaggagaatgt 922
                |||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 28341190 taaaagactgattaatgataacaatgcatcataaaaccttcagaagggaaaggagaatgt 28341131

                                                                  
Query: 923      tttgtggaccatttgttttgtgtgtggcagtttttaagttattagttttt 972
                |||||||||||||||||||||||||||  | |||||||||||||||||||
Sbjct: 28341130 tttgtggaccatttgttttgtgtgtgg-tggttttaagttattagttttt 28341082



 Score =  349 bits (176), Expect = 2e-93
 Identities = 293/332 (88%)
 Strand = Plus / Minus

                                                                            
Query: 1        tatgccttggttcaagggatggaaagtcacccgtaaagatggcaatgccagtggaaccac 60
                |||||||||||| |||||||||||| || ||| |||||||||||||||||||||||||||
Sbjct: 28342279 tatgccttggtttaagggatggaaattcgcccataaagatggcaatgccagtggaaccac 28342220

                                                                            
Query: 61       actgcttgaagctctggattgcattctaccaccaactcgtccaactgacaagcccttgcg 120
                 ||||||||||||||||||||||| || |||||||||| | ||| ||| || |||||| |
Sbjct: 28342219 gctgcttgaagctctggattgcatactgccaccaactcttgcaaatgataatcccttgtg 28342160

                                                                            
Query: 121      cctgcccctccaggacgtctacaaaattggtggtattggtacagtccctgtgggccgagt 180
                 ||||| ||||| || | ||| |||| | ||||||||||||| || |||||| |  ||||
Sbjct: 28342159 tctgcctctccatgatgcctataaaactagtggtattggtactgttcctgtgtgttgagt 28342100

                                                                            
Query: 181      ggagaccggtgttctcaaacctggcatggtggtcacctttgctccagtcaatgttacaac 240
                |||||| ||| ||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 28342099 ggagactggtattctcaaacctggcatggtggtcacctttgctccagtcaacattacaac 28342040

                                                                            
Query: 241      tgaagtcaagtctgttgaaatgcaccatgaagctttgagtgaagcccttcctggggacaa 300
                |||||| || |||||||||||||||||||||||||||||||||||||||||| |||||| 
Sbjct: 28342039 tgaagtaaaatctgttgaaatgcaccatgaagctttgagtgaagcccttccttgggacag 28341980

                                                
Query: 301      cgtgggctttaatgtcaaaaacgtgtctgtca 332
                 |||||||| ||||| || ||| |||||||||
Sbjct: 28341979 tgtgggcttcaatgttaagaacatgtctgtca 28341948



 Score =  141 bits (71), Expect = 9e-31
 Identities = 158/183 (86%), Gaps = 3/183 (1%)
 Strand = Plus / Plus

                                                                             
Query: 251       tctgttgaaatgcaccatgaagctttgagtgaagcccttcctggggacaacgtgggcttt 310
                 ||||||||||||||||||||||||||||||||||| |||||||||| ||  |||||||| 
Sbjct: 112016097 tctgttgaaatgcaccatgaagctttgagtgaagctcttcctgggggcattgtgggcttc 112016156

                                                                             
Query: 311       aatgtcaaaaacgtgtctgtcaaagacgttcgtcgtggcaatgtggctggtgacagcaaa 370
                 |||||||| ||||||||||||||| | |||| | ||||||   ||||| |||||||||||
Sbjct: 112016157 aatgtcaagaacgtgtctgtcaaatatgttcattgtggcatcatggct-gtgacagcaaa 112016215

                                                                             
Query: 371       aatgacccacctatggaagcagctggctttacagctcaggtgattatcctgaaccatcct 430
                 ||||  |||   || |||||||||| ||| |||||| ||||||| || ||||||||||||
Sbjct: 112016216 aatggtcca-gaatagaagcagctgacttcacagcttaggtgatcat-ctgaaccatcct 112016273

                    
Query: 431       ggc 433
                 |||
Sbjct: 112016274 ggc 112016276



 Score =  137 bits (69), Expect = 1e-29
 Identities = 191/232 (82%), Gaps = 16/232 (6%)
 Strand = Plus / Plus

                                                                             
Query: 824       tcagaactgtttgtctcaattggccatttaagtttaatagtaaaagactggttaatgata 883
                 |||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 112016686 tcagaactgtttgtctcaattggccatttaagtttagtaataaaagactgattaatgata 112016745

                                                                             
Query: 884       acaatgcatcgtaaaaccttcagaaggaaaggagaatgttttgtggaccatttgttt--- 940
                     ||||  |||||||||||| ||| |||||| ||||||||||||| |||||| ||   
Sbjct: 112016746 caggtgcaatgtaaaaccttcaaaagcaaaggataatgttttgtggatcatttgcttttg 112016805

                                                                             
Query: 941       -----------tgtgtgtggcagtttttaagttattagtttttaaaatcagtacttttta 989
                            |||||||||||| |||||||||||| |||| |||||||  |||| ||||
Sbjct: 112016806 tggtgtatgtatgtgtgtggcag-ttttaagttatttgtttctaaaatctatactcttta 112016864

                                                                     
Query: 990       atggaaacaacttgaccaaaaatctgtcacagaattttgagacccattaaaa 1041
                 |||||||||  |||| ||||||||||||| ||| ||||| || |||||||||
Sbjct: 112016865 atggaaacactttga-caaaaatctgtcaaagagttttgggatccattaaaa 112016915



 Score =  129 bits (65), Expect = 4e-27
 Identities = 75/77 (97%), Gaps = 1/77 (1%)
 Strand = Plus / Minus

                                                                            
Query: 954      ttttaagttattagtttttaaaatcagtactttttaatggaaacaacttgaccaaaaatc 1013
                |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 28341048 ttttaaattattagtttttaaaatcagtactttt-aatggaaacaacttgaccaaaaatc 28340990

                                 
Query: 1014     tgtcacagaattttgag 1030
                |||||||||||||||||
Sbjct: 28340989 tgtcacagaattttgag 28340973


>Sscrofa_ChrX 
||          Length = 144288218

 Score =  684 bits (345), Expect = 0.0
 Identities = 743/872 (85%), Gaps = 14/872 (1%)
 Strand = Plus / Plus

                                                                             
Query: 122       ctgcccctccaggacgtctacaaaat-tggtggtattggtacagtccctgtgggccgagt 180
                 ||||| ||||||||| ||| |||||  ||||||||||| ||| |||||  |||| |||||
Sbjct: 103012407 ctgcctctccaggacatctgcaaaaaatggtggtattgatactgtccccatgggtcgagt 103012466

                                                                             
Query: 181       ggagaccggtgttctcaaacctggcatggtggtcacctttgctccagtcaatgttacaac 240
                 ||| || |||||||||| || |||||||||| ||| |||||||||||| |||||||||  
Sbjct: 103012467 ggacactggtgttctcagacttggcatggtgctcatctttgctccagttaatgttacaca 103012526

                                                                             
Query: 241       tgaagtcaagtctgttgaaatgcaccatgaagctttgagtgaagcccttcctggggacaa 300
                 |||||| |  ||| |||||||||||||||||||||||||   ||||||||||| ||||| 
Sbjct: 103012527 tgaagtaacatctattgaaatgcaccatgaagctttgaggacagcccttcctgaggacag 103012586

                                                                             
Query: 301       cgtgggctttaatgtcaaaaacgtgtctgtcaaagacgttcgtcgtggcaatgtggctgg 360
                  |||| ||| |||||||| ||| ||||||||||||| |||||| ||| |||||||||   
Sbjct: 103012587 tgtggccttcaatgtcaagaacatgtctgtcaaagatgttcgttgtgtcaatgtggccaa 103012646

                                                                             
Query: 361       tgacagcaaaaatgacccac---------ctatggaagcagctggctttacagctcaggt 411
                 | |||||||||||| ||| |         | |  |||||||||||||| |||   || ||
Sbjct: 103012647 taacagcaaaaatgccccccagcccccgcccaaagaagcagctggcttcacaaaccaagt 103012706

                                                                             
Query: 412       gattatcctgaaccatcctggccagatcagtgctggttacgcacctgtgctggattgcca 471
                 ||||||| |||||| |||  ||||  || |||||||    ||||||||||||||||| ||
Sbjct: 103012707 gattatcttgaaccgtcccagccaactcggtgctggaggtgcacctgtgctggattgtca 103012766

                                                                             
Query: 472       cacagctcacattgcctgcaagtttgctgaactgaaggagaagattgatcgtcgttctgg 531
                   |||| | || ||| |||||||||||||    ||| |||||||||| |   | ||||||
Sbjct: 103012767 tccagcccccactgcttgcaagtttgctgggtggaaagagaagattggtgaccattctgg 103012826

                                                                             
Query: 532       gaaaaagctggaagatggcc-ccaagttcttgaaatctggtgatgctgccattgtcgata 590
                 ||||||||||||||| |||| |||| || || ||||| ||||||||  ||||||| ||||
Sbjct: 103012827 gaaaaagctggaagacggcctccaatttttttaaatcgggtgatgcctccattgttgata 103012886

                                                                             
Query: 591       tggttcctggcaagcccatgtgtgttgagagcttctctgactatcctcctctgggccgat 650
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |
Sbjct: 103012887 tggttcctggcaagcccatgtgtgttgagagcttctctgactatcctcctctgggtcatt 103012946

                                                                             
Query: 651       ttgctgttcgtgacatgagacagacagttgctgtgggtgtcatcaaagctgtggacaaga 710
                 ||||||||| ||||||||||||||  ||||||||||||||||||||||| ||||||||||
Sbjct: 103012947 ttgctgttcatgacatgagacagatggttgctgtgggtgtcatcaaagcagtggacaaga 103013006

                                                                             
Query: 711       aggcagctggagctggcaaggtcaccaagtctgctcagaaagctcagaaggctaaatgaa 770
                 |||||||||||| ||||||||||||||||||||| |||||||| | ||||||||||||||
Sbjct: 103013007 aggcagctggaggtggcaaggtcaccaagtctgcccagaaagcgctgaaggctaaatgaa 103013066

                                                                             
Query: 771       tattatccccaatacctgccaccccagtcttaatcagtgg--tggaagaacggtctcaga 828
                 | |||||||||||||| || ||||||||||||||||||||   | |||||| ||||||||
Sbjct: 103013067 tgttatccccaatacccgctaccccagtcttaatcagtgggtagaaagaacagtctcaga 103013126

                                                                             
Query: 829       actgtttgtctcaattggccatttaagtttaatagtaaaagactggttaatgataacaat 888
                 |||||||||||||| ||||| |||||| |||||||||||||||||| |||||||||||| 
Sbjct: 103013127 actgtttgtctcaaatggccgtttaagcttaatagtaaaagactggctaatgataacaac 103013186

                                                                             
Query: 889       gcatcgtaaaaccttcagaaggaaaggagaatgttttgtggaccatttgttttgtgtgtg 948
                 ||||  |||||||||  ||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 103013187 gcataataaaacctttggaaggaaaggaaaatgttttgtggaccattggttttgtgtgtg 103013246

                                                 
Query: 949       gcagtttttaagttattagtttttaaaatcag 980
                 |||| ||||||||| |||||||| ||||||||
Sbjct: 103013247 gcag-ttttaagttgttagttttaaaaatcag 103013277



 Score =  383 bits (193), Expect = e-103
 Identities = 440/510 (86%), Gaps = 23/510 (4%)
 Strand = Plus / Plus

                                                                            
Query: 452      gcacctgtgctggattgccacacagctcacattgcctgc-aagtttgctgaactgaagga 510
                ||||||||||| ||||| ||||||||||||||||| ||| ||||||||||| ||||||  
Sbjct: 67392712 gcacctgtgctagattgtcacacagctcacattgcttgccaagtttgctgagctgaag-- 67392769

                                                                            
Query: 511      gaagattgatcgtcgttctgggaaaaagctggaagatggccccaagttcttgaaatctgg 570
                 |||||||||| | ||| |||| |||||||||||||||||||||| || ||||| || | 
Sbjct: 67392770 -aagattgatcattgttttggggaaaagctggaagatggccccaaatttttgaagtcag- 67392827

                                                                            
Query: 571      tgatgctgccattgtcgatatggttcctggcaagcccatgtgtgttgagagcttctctga 630
                |||||||||||| || ||||||||||||||| ||||||||| |||||||| |||||||||
Sbjct: 67392828 tgatgctgccatcgttgatatggttcctggccagcccatgtatgttgagaacttctctga 67392887

                                                                            
Query: 631      ctatcctcctctgggcc-gatttgctgttcgtgacatgagacagacagttgctgtgggtg 689
                ||||||| |||||||||   |||||||||| || |||||||||||  |||||||  ||||
Sbjct: 67392888 ctatcctgctctgggccatttttgctgttcatggcatgagacagattgttgctgcaggtg 67392947

                                                                            
Query: 690      tcatcaaagctgtggacaagaaggcagctggagctggcaaggtcaccaagtctgctcaga 749
                   ||||||| |||||||||||||||||||||||||||||| |||  |||||||| ||||
Sbjct: 67392948 ---tcaaagcagtggacaagaaggcagctggagctggcaagttcagtaagtctgcacaga 67393004

                                                                            
Query: 750      aagctcagaaggctaaatgaat-attatccccaatacctgccaccccagtctt-aatcag 807
                || | ||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||||
Sbjct: 67393005 aaacccagaaggctaaataaataattatcctcaatacctgccaccccagtcttaaatcag 67393064

                                                                            
Query: 808      tggtggaagaacggtctcagaactgtttgtctcaattggccatttaagtttaatagtaaa 867
                  |||||||||| |||||  |||||  ||||||||||    ||||||||||||||| |||
Sbjct: 67393065 ctgtggaagaactgtctc--aactg--tgtctcaatt----atttaagtttaatagcaaa 67393116

                                                                            
Query: 868      agactggttaatgataacaatgcatcgtaaaaccttcagaaggaaaggagaatgttttgt 927
                | ||| |||||||| ||  ||||||| |||||| |||||||||||   ||||||||||||
Sbjct: 67393117 atactagttaatgaaaatgatgcatcataaaacattcagaaggaa---agaatgttttgt 67393173

                                              
Query: 928      ggaccatttgttt-tgtgtgtggcagtttt 956
                |||||| |||||| ||||||||||||||||
Sbjct: 67393174 ggaccacttgtttgtgtgtgtggcagtttt 67393203



 Score =  168 bits (85), Expect = 4e-39
 Identities = 138/152 (90%), Gaps = 4/152 (2%)
 Strand = Plus / Minus

                                                                            
Query: 904      cagaaggaaaggagaatgttttgtggaccatttgttttgtgtgtggcagtttttaagtta 963
                ||||||||||||||||| |||||| | ||||||||||||||||| |||||||| ||||||
Sbjct: 76258749 cagaaggaaaggagaatattttgtaggccatttgttttgtgtgttgcagtttt-aagtta 76258691

                                                                            
Query: 964      ttagtttttaaaatcagtactttttaatggaaacaacttgaccaaaaatctgtcacagaa 1023
                ||| ||||||||||||| |||||| ||||||||  |||||||||||||||||||||||||
Sbjct: 76258690 ttaatttttaaaatcaggactttt-aatggaaatcacttgaccaaaaatctgtcacagaa 76258632

                                                
Query: 1024     ttttgagacccattaaaa--aaagtttaatga 1053
                |||||| ||| |||||||  ||||||||||||
Sbjct: 76258631 ttttgaaaccaattaaaatgaaagtttaatga 76258600



 Score =  157 bits (79), Expect = 2e-35
 Identities = 177/209 (84%), Gaps = 3/209 (1%)
 Strand = Plus / Plus

                                                                            
Query: 122      ctgcccctccaggacgtctacaaaattggtggtattggtacagtccctgtgggccgagtg 181
                |||||| |||||||||| ||||||||||||||| ||||||  ||| |||| ||   ||||
Sbjct: 67392142 ctgcccttccaggacgtttacaaaattggtggtgttggtattgtctctgttggttaagtg 67392201

                                                                            
Query: 182      gagaccggtgttctcaaacctggcatggtggtcacctttgctccagtcaatgttacaact 241
                 |||| ||| |||||||| |||||||||||||||||||||||||||||||  ||||||||
Sbjct: 67392202 aagactggtattctcaaatctggcatggtggtcacctttgctccagtcaacattacaact 67392261

                                                                            
Query: 242      gaagtcaagtctgttgaaatgcaccatgaagctttgagtgaagcccttcctggggacaac 301
                ||||| ||||| | ||   ||||||||||||||| |||| ||||||||| |||| | || 
Sbjct: 67392262 gaagtaaagtcagatg---tgcaccatgaagcttagagtaaagcccttcttgggaataat 67392318

                                             
Query: 302      gtgggctttaatgtcaaaaacgtgtctgt 330
                 ||||||| |||||||| ||| |||||||
Sbjct: 67392319 ctgggcttcaatgtcaagaacatgtctgt 67392347



 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                            
Query: 324      tgtctgtcaaagacgttcgtcgtggcaatgtggctggtgacagcaaaaatgacccaccta 383
                ||||||||||||| ||| ||| ||| |||||| |||||  |||||||||||||||||  |
Sbjct: 67392625 tgtctgtcaaagatgtttgtcatgggaatgtgcctggtctcagcaaaaatgacccactga 67392684

                          
Query: 384      tggaagcagc 393
                ||||||||||
Sbjct: 67392685 tggaagcagc 67392694


>Sscrofa_Chr02 
||          Length = 162569375

 Score =  551 bits (278), Expect = e-154
 Identities = 742/891 (83%), Gaps = 18/891 (2%)
 Strand = Plus / Plus

                                                                            
Query: 2        atgccttggttcaagggatggaaagtcacccgtaaagatggcaatgccagtggaaccaca 61
                ||||||||| |||  ||| |||||||||||| ||  ||||||||||||||||||||||  
Sbjct: 11960185 atgccttggctcataggaaggaaagtcacccatag-gatggcaatgccagtggaaccaag 11960243

                                                                            
Query: 62       ctgcttgaagctctggattgcattctaccaccaactcgtccaactgacaagcccttgcgc 121
                |||| |||||||||||||||||| || ||||||| | |||||||||||||| || |||  
Sbjct: 11960244 ctgcctgaagctctggattgcatcctgccaccaagttgtccaactgacaagtccgtgcat 11960303

                                                                            
Query: 122      ctgcccctccaggacgtctacaaaattggtggtattggtacagtccctgtg-ggccgagt 180
                |||||||||||||| ||||| | ||||||    ||||| || ||||||||  || |||||
Sbjct: 11960304 ctgcccctccaggatgtctatagaattggg---attgggactgtccctgttaggtcgagt 11960360

                                                                            
Query: 181      ggagaccggtgttctcaaacctggcatggtggtcacctttgctccagtcaatgttacaac 240
                |||||| |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 11960361 ggagactggtgttctaaaacctgacatggtggtcacctttgctccag-caatgttacaac 11960419

                                                                            
Query: 241      tgaagtcaagtctgttgaaatgcaccatgaagctttgagtgaagcccttcctggggacaa 300
                  |||   || ||| ||||||||| | ||| ||||||||| |||||| ||| || |||| 
Sbjct: 11960420 caaagaacagactgctgaaatgcatcctgatgctttgagtaaagcccatccgggagaca- 11960478

                                                                            
Query: 301      cgtgggctttaatgtcaaaaacgtgtctgtcaaagacgttcgtcgtggcaatgtggctgg 360
                ||| ||||| ||  |||| || |||||||||||||| |||| || |||||||||| | | 
Sbjct: 11960479 cgttggcttcaacatcaagaaggtgtctgtcaaagatgttcatcatggcaatgtgacgga 11960538

                                                                            
Query: 361      tgacagcaaaaatgacccacctatggaagcagctggctttacagctcaggtgattatcct 420
                |||||||||||||||||| || || |||||||||| ||| |||||||| |||| |||| |
Sbjct: 11960539 tgacagcaaaaatgaccctccaattgaagcagctgacttcacagctcaagtga-tatctt 11960597

                                                                            
Query: 421      gaaccatcctggccagatcagtgctggttacgcacctgtgctggattgccacacagctca 480
                |||||| || ||||| ||||||||||| || |  ||  |  |||| |   | | ||||||
Sbjct: 11960598 gaaccacccaggccaaatcagtgctggatatgtccccatcttggactcttatatagctca 11960657

                                                                            
Query: 481      cattgcctgcaagtttgctgaactgaaggagaagattgatcgtcgttctgggaaaaagct 540
                || || |||||||||||  || |||||||||||||||||  ||| | ||||   ||||||
Sbjct: 11960658 cagtgactgcaagtttgtcgagctgaaggagaagattgagtgtcatcctggacgaaagct 11960717

                                                                            
Query: 541      ggaagatggccccaagttcttgaaatctggtgatgctgccattgtcgatatggttcctgg 600
                |||||||||||  ||  |||||||||||||| ||||||||||||| | ||||||||||||
Sbjct: 11960718 ggaagatggcctgaaactcttgaaatctggtcatgctgccattgttgctatggttcctgg 11960777

                                                                            
Query: 601      caagcccatgtgtgttgagagcttctctgactatcctcctctgggccgatttgctgttcg 660
                |||| ||||||||| ||||||| ||||||||||| ||||||||||  | ||| ||||| |
Sbjct: 11960778 caagtccatgtgtgctgagagcatctctgactattctcctctgggttgttttactgtttg 11960837

                                                                            
Query: 661      tgacatgagacagacagttgctgtgggtgtcatcaaagctgtggacaagaaggcagctgg 720
                |||||| ||| |||||||||||||||||||||||||||| |||||||||||||  ||| |
Sbjct: 11960838 tgacataagatagacagttgctgtgggtgtcatcaaagcagtggacaagaagggtgctag 11960897

                                                                            
Query: 721      agctggcaaggtcaccaagtctgctcagaaagctcagaaggctaaatgaatattatcccc 780
                |||| |||||| |||||||||||| |||||          | |||| ||||||||||  |
Sbjct: 11960898 agcttgcaaggccaccaagtctgcccagaa----------ggtaaaagaatattatctgc 11960947

                                                                            
Query: 781      aatacctgccaccccagtcttaatcagtggtggaagaacggtctcagaactgtttgtctc 840
                |||||||||||||||||| ||||||  ||||||||||| |||||||||| | ||||  | 
Sbjct: 11960948 aatacctgccaccccagtattaatctatggtggaagaatggtctcagaattatttgaata 11961007

                                                                   
Query: 841      aattggccatttaagtttaatagtaaaagactggttaatgataacaatgca 891
                ||||||||||||||| ||||||||||||||||||||||| ||| |||||||
Sbjct: 11961008 aattggccatttaaggttaatagtaaaagactggttaattatagcaatgca 11961058



 Score =  272 bits (137), Expect = 4e-70
 Identities = 424/519 (81%), Gaps = 8/519 (1%)
 Strand = Plus / Minus

                                                                             
Query: 2         atgccttggttcaagggatggaaagtcacccgtaaagatggcaatgccagtggaaccaca 61
                 |||| |||||||  |||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 133457072 atgctttggttccggggatggaaagtcaccggtaaagatggcagtgccagtggaaccaca 133457013

                                                                             
Query: 62        ctgcttgaagctctggattgcattctaccaccaactcgtccaactgacaagcccttgcgc 121
                 | |||| ||||   || |||||| || |||||| || ||||| |||||||| |||||| |
Sbjct: 133457012 cggcttaaagcctggggttgcatcctgccaccagcttgtccacctgacaagaccttgcac 133456953

                                                                             
Query: 122       ctgcccctccaggacgtctacaaaattggtggtattggtacagtccctgtgggccgagtg 181
                 ||||||||||||||| |||| |||||| || | ||||| |||||||| ||||||| ||| 
Sbjct: 133456952 ctgcccctccaggacatctagaaaattagtaggattggcacagtccccgtgggccaagta 133456893

                                                                             
Query: 182       gagaccggtgttctcaaacctggcatggtggtcacctttgctccagtcaatgttacaact 241
                 || ||  |||||||||| |||||||  ||||||| ||||| ||||||   ||     |||
Sbjct: 133456892 gaaactagtgttctcaatcctggcacagtggtcatctttgttccagt---tg-----act 133456841

                                                                             
Query: 242       gaagtcaagtctgttgaaatgcaccatgaagctttgagtgaagcccttcctggggacaac 301
                  |||| || ||| |||||||||||||||||||||||||| |||| ||||| |||||   |
Sbjct: 133456840 aaagtgaaatctattgaaatgcaccatgaagctttgagtaaagctcttccaggggatgtc 133456781

                                                                             
Query: 302       gtgggctttaatgtcaaaaacgtgtctgtcaaagacgttcgtcgtggcaatgtggctggt 361
                  ||||  | | |||||| ||  |||||||||||||  || ||| |||   ||||||| ||
Sbjct: 133456780 atgggtctcagtgtcaagaatatgtctgtcaaagatattggtcatggtggtgtggctagt 133456721

                                                                             
Query: 362       gacagcaaaaatgacccacctatggaagcagctggctttacagctcaggtgattatcctg 421
                 ||||| ||||||||||||||  ||||||| |||||||| |    ||||||||||||||||
Sbjct: 133456720 gacagtaaaaatgacccaccagtggaagctgctggcttcatgattcaggtgattatcctg 133456661

                                                                             
Query: 422       aaccatcctggccagatcagtgctggttacgcacctgtgctggattgccacacagctcac 481
                 |||||||| |||||  |||||||||| |   || || ||||   ||  ||||||||||||
Sbjct: 133456660 aaccatccaggccaactcagtgctggatgtacatctttgctcagttttcacacagctcac 133456601

                                                        
Query: 482       attgcctgcaagtttgctgaactgaaggagaagattgat 520
                 ||||| |||||||||||||| ||||||||||||| ||||
Sbjct: 133456600 attgcttgcaagtttgctgagctgaaggagaagactgat 133456562



 Score =  127 bits (64), Expect = 1e-26
 Identities = 101/112 (90%), Gaps = 1/112 (0%)
 Strand = Plus / Plus

                                                                            
Query: 885      caatgcatcgtaaaaccttcagaaggaaaggagaatgttttgtggaccatttgttttgtg 944
                |||| |||| |||||||||||   ||||||||||||||||||||||||||||||||||||
Sbjct: 11961318 caatacatcataaaaccttcatttggaaaggagaatgttttgtggaccatttgttttgtg 11961377

                                                                    
Query: 945      tgtggcagtttttaagttattagtttttaaaatcagtactttttaatggaaa 996
                 | ||||| ||||||||||||||||||||||||||||||  |||||| ||||
Sbjct: 11961378 cgcggcag-ttttaagttattagtttttaaaatcagtaccctttaattgaaa 11961428



 Score =  113 bits (57), Expect = 2e-22
 Identities = 77/81 (95%), Gaps = 2/81 (2%)
 Strand = Plus / Minus

                                                                            
Query: 974      aaatcagtactttttaatggaaacaacttgaccaaaaatctgtcacagaattttgagacc 1033
                ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 11876815 aaatcagtactttttaatggaaacaacttcaccaaaaatctgtcacagaattttg-gacc 11876757

                                     
Query: 1034     catta-aaaaaagtttaatga 1053
                ||||| || ||||||||||||
Sbjct: 11876756 cattacaacaaagtttaatga 11876736



 Score =  103 bits (52), Expect = 2e-19
 Identities = 166/202 (82%), Gaps = 4/202 (1%)
 Strand = Plus / Minus

                                                                             
Query: 747       agaaagctcagaaggctaaatgaatattatccccaatacctgccaccccagtcttaatca 806
                 ||||| |||||||||||||||||||||||| ||  |||| ||||| ||  ||||||||||
Sbjct: 133456330 agaaaactcagaaggctaaatgaatattattcctcatac-tgccaacctggtcttaatca 133456272

                                                                             
Query: 807       gtggtggaagaacggtctcagaactgtttgtctcaattggccatttaagtttaatagtaa 866
                 |||| | |||| |  | ||||||  |||  |||||||| | ||||||| |||| ||||| 
Sbjct: 133456271 gtggggtaagagcattttcagaatggttgatctcaatttgtcatttaaatttagtagtag 133456212

                                                                             
Query: 867       aagactggttaatgataacaatgcatcgtaaaaccttcagaaggaaaggagaatgttttg 926
                 ||||||||||| ||||||   ||| || |||||||||||  | |||||||||||||||||
Sbjct: 133456211 aagactggttactgataa---tgcgtcataaaaccttcaagaagaaaggagaatgttttg 133456155

                                       
Query: 927       tggaccatttgttttgtgtgtg 948
                 || ||  |||| ||||||||||
Sbjct: 133456154 tgaactgtttgctttgtgtgtg 133456133



 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 64/70 (91%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                            
Query: 919      atgttttgtggaccatttgttttgtgtgtggcagtttttaagttattagtttttaaaatc 978
                ||||||||||| |||||| ||||||||||||||| ||| |||||| ||||||||||||||
Sbjct: 11877116 atgttttgtgggccatttattttgtgtgtggcagcttt-aagttactagtttttaaaatc 11877058

                          
Query: 979      agtacttttt 988
                |||| |||||
Sbjct: 11877057 agtaattttt 11877048


>Sscrofa_Chr12 
||          Length = 63588571

 Score =  527 bits (266), Expect = e-147
 Identities = 698/838 (83%), Gaps = 13/838 (1%)
 Strand = Plus / Minus

                                                                            
Query: 5        ccttggttcaagggatggaaagtcacccgtaaagatggcaatgccagtggaaccacactg 64
                ||||||||||  |||||||||||||||| |||||||||||||| |  ||||||||  |||
Sbjct: 48459705 ccttggttcacaggatggaaagtcacccataaagatggcaatgtccatggaaccatgctg 48459646

                                                                            
Query: 65       cttgaagctctggattgcattctaccaccaactcgtccaactgacaagcccttgcgcctg 124
                |||||||||||||||||||| || ||||| ||| | |||||||||| ||||||||  |||
Sbjct: 48459645 cttgaagctctggattgcatcctgccacctacttggccaactgacaggcccttgcatctg 48459586

                                                                            
Query: 125      cccctccaggacgtctacaaaattggtggtattggtacagtccctgtgggccgagtggag 184
                |||||| |||| |||||||||||||||||| ||||||  ||| || |||   ||||||||
Sbjct: 48459585 cccctc-aggatgtctacaaaattggtggttttggtaatgtctctttggattgagtggag 48459527

                                                                            
Query: 185      accggt--gttctcaaacctggcatggtggtcacctttgctccagtcaatgttacaactg 242
                |  ||   ||||||||||||||  || |||| ||||||| ||||||  ||||||||||||
Sbjct: 48459526 attggctggttctcaaacctggtttgatggttacctttgttccagttgatgttacaactg 48459467

                                                                            
Query: 243      aagtcaagtctgttgaaatgcaccatgaagctttgagtgaagcccttcctggggacaacg 302
                | || || |||| ||||||||| ||  ||||||||  ||||| | |||||||||| || |
Sbjct: 48459466 aggtaaaatctgctgaaatgcatcacaaagctttggatgaagactttcctggggagaatg 48459407

                                                                            
Query: 303      tgggctttaatgtcaaaaacgtgtctgtcaaagacgttcgtcgtggcaatgtggctggtg 362
                ||||||||||||| |||||| ||||||||||||| |||| | |||||| |||  ||||||
Sbjct: 48459406 tgggctttaatgtaaaaaacatgtctgtcaaagatgttcattgtggcattgtt-ctggtg 48459348

                                                                            
Query: 363      acagcaaaaatgacccacctatggaagcagctggctttacagctcaggtgattatcctga 422
                ||||||||||||||||| |  |||||||||||||||| | ||||||| |||||||| |||
Sbjct: 48459347 acagcaaaaatgacccatcagtggaagcagctggcttcatagctcagatgattatcttga 48459288

                                                                            
Query: 423      accatcctggccagatcagtgctggttacgcacctgtgctggattgccacacagctcaca 482
                |||||||   | | ||| ||||||| ||        || |||||   |||||| || |||
Sbjct: 48459287 accatccacactaaatccgtgctggata--------tggtggatcttcacacaactaaca 48459236

                                                                            
Query: 483      ttgcctgcaagtttgctgaactgaaggagaagattgatcgtcgttctgggaaaaagctgg 542
                || | | ||||| | |||| |||||||||||||| |||| || |||||||||||||||||
Sbjct: 48459235 ttac-tccaagtgttctgagctgaaggagaagatggatcatcattctgggaaaaagctgg 48459177

                                                                            
Query: 543      aagatggccccaagttcttgaaatctggtgatgctgccattgtcgatatggttcctggca 602
                || ||| || ||| |||||||||| || |  |||||||||||| || ||||||||||| |
Sbjct: 48459176 aaaatgccctcaaattcttgaaatttgattctgctgccattgttgacatggttcctggta 48459117

                                                                            
Query: 603      agcccatgtgtgttgagagcttctctgactatcctcctctgggccgatttgctgttcgtg 662
                |||||| ||||| |||||||||||||  |||||||| |||||| |  |||| ||||| ||
Sbjct: 48459116 agcccacgtgtgctgagagcttctctttctatcctcttctgggtcattttgatgttcatg 48459057

                                                                            
Query: 663      acatgagacagacagttgctgtgggtgtcatcaaagctgtggacaagaaggcagctggag 722
                ||||||||||||   ||  | |||||||||| | ||  ||||||||||||||||||||||
Sbjct: 48459056 acatgagacagatgattattatgggtgtcataagagtagtggacaagaaggcagctggag 48458997

                                                                            
Query: 723      ctggcaaggtcaccaagtctgctcagaaagctcagaaggctaaatgaatattatccccaa 782
                ||||||||||||| || |||||  ||||| |||||||||||||||||||||||| |||| 
Sbjct: 48458996 ctggcaaggtcactaactctgcctagaaaactcagaaggctaaatgaatattattcccat 48458937

                                                                          
Query: 783      tacctgccaccccagtcttaatcagtggtggaagaacggtctcagaactgtttgtctc 840
                |||||||||| ||||||||||| || |||||||||| || |||||||||| |||||||
Sbjct: 48458936 tacctgccactccagtcttaatgagcggtggaagaatgggctcagaactgcttgtctc 48458879



 Score =  155 bits (78), Expect = 6e-35
 Identities = 165/190 (86%), Gaps = 3/190 (1%)
 Strand = Plus / Minus

                                                                            
Query: 866      aaagactggttaatgataacaatgcatcgtaaaaccttcagaaggaaaggagaatgtttt 925
                ||||||||||||||||| ||||||||| ||||||||||||||||  ||| || || | ||
Sbjct: 48458624 aaagactggttaatgatgacaatgcattgtaaaaccttcagaagagaagaaggatatctt 48458565

                                                                            
Query: 926      gtggaccattt-gttttgtgtgtggcagtttttaagttattagtttttaaaatcagtact 984
                ||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||||||  |
Sbjct: 48458564 gtggatcattttgttttgtgtgtggcagtttt-aagttgttagtttttaaaatcagtgtt 48458506

                                                                            
Query: 985      ttttaatggaaacaacttgaccaaaaatctgtcacagaattttgagacccattaaaa-aa 1043
                 ||||||||||||||| ||  ||| | ||||  |||||||||||| | ||||||||| ||
Sbjct: 48458505 ctttaatggaaacaacctgttcaagagtctgaaacagaattttgaaatccattaaaacaa 48458446

                          
Query: 1044     agtttaatga 1053
                ||||||||||
Sbjct: 48458445 agtttaatga 48458436


>Sscrofa_Chr13 
||          Length = 218635234

 Score =  414 bits (209), Expect = e-113
 Identities = 848/1052 (80%), Gaps = 38/1052 (3%)
 Strand = Plus / Minus

                                                                            
Query: 2        atgccttggttcaagggatggaaagtcacccgtaaagatggcaatgccagtggaaccaca 61
                ||||||| ||||||||||| ||||  || || |||||||||||||||||||||||| |||
Sbjct: 11468932 atgccttagttcaagggatagaaa--catccataaagatggcaatgccagtggaactaca 11468875

                                                                            
Query: 62       ctgcttgaagctctggattgcattctaccaccaactcgtccaactgacaagcccttgcgc 121
                ||| |||||||| || ||||||| || | || |||   |||||||||||||||||||   
Sbjct: 11468874 ctgtttgaagctttgaattgcatcctgctac-aacaactccaactgacaagcccttgaaa 11468816

                                                                            
Query: 122      -ctgcccctccaggacgtctacaaaattggtggtattggtacagtccctgtgggccgagt 180
                 |||| |||||| |||  | ||||||||||||| | ||||||  ||||  |||       
Sbjct: 11468815 tctgctcctccaagaccgccacaaaattggtggcactggtactatccccatgg------- 11468763

                                                                            
Query: 181      ggagaccggtgttctcaaacctggcatggtggtcacctttgctccagtcaatgttacaac 240
                  ||||   |||| |||||||| ||||||||||||  ||||||  |||||   ||   ||
Sbjct: 11468762 --agact--tgttttcaaaccttgcatggtggtcaattttgctttagtcagctttgtgac 11468707

                                                                            
Query: 241      tgaagtcaagtctgttgaaatgcaccatgaagctttgagtgaagcccttcctggggacaa 300
                |||| | ||||||||| ||||||| ||||| |||||||||||||| ||||||||| || |
Sbjct: 11468706 tgaaataaagtctgtt-aaatgcatcatgaggctttgagtgaagctcttcctgggaacca 11468648

                                                                            
Query: 301      cgtgggctttaatgtcaaaaacgtgtctgtcaaagacgttcgtcgtggcaatgtggctgg 360
                 |||||||| | |||||  || ||||||||||||||         ||||||   ||||| 
Sbjct: 11468647 tgtgggcttcagtgtcaggaatgtgtctgtcaaaga---------tggcaacacggctga 11468597

                                                                            
Query: 361      tgacagcaaaaatgacccacctatggaagcagctggctttacagctcaggtgattatcct 420
                | |||||||||| ||| |||  ||||||||||  ||||| ||||||||| |||||||| |
Sbjct: 11468596 taacagcaaaaa-gactcactgatggaagcagtgggcttcacagctcagctgattatctt 11468538

                                                                            
Query: 421      gaaccatcctggccagatcagtgctggttacgcacctgtgctggattgccacacagctca 480
                || |||||  |||||||||||| |||| || ||| ||||| |||| || |||||||||| 
Sbjct: 11468537 gagccatcaaggccagatcagtactggctatgcatctgtgttggactgtcacacagctcg 11468478

                                                                            
Query: 481      cattgcctgcaagtttgctgaactgaaggagaagattgatcgtcgttctgggaaaaagct 540
                |  | | |||||||||||||| ||||||||||||  |||| | | ||  ||||| | |||
Sbjct: 11468477 ccctacatgcaagtttgctgagctgaaggagaagcatgattgccttttggggaagaggct 11468418

                                                                            
Query: 541      ggaagatggccccaagttcttgaaatctggtgatgctgccattgtcgatatggttcctgg 600
                ||||||||||||||| |||   ||||||||||||||  | || || ||||||||||||||
Sbjct: 11468417 ggaagatggccccaaattccaaaaatctggtgatgccacaatggttgatatggttcctgg 11468358

                                                                            
Query: 601      caagcccatgtgtgttgagagcttctctgactatcctcctctgggccgatttgctgttcg 660
                ||| || ||||||||| | || |||  | | || ||||||||||| |  | || |||| |
Sbjct: 11468357 caaacctatgtgtgttaacagtttccttaaataccctcctctgggtcattctgttgtttg 11468298

                                                                            
Query: 661      tgacatgagacagacagttgctgtgggtgtcatcaaagctgtggacaagaaggcagctgg 720
                |||| || |||| |||| ||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 11468297 tgacttgtgacaaacaggtgctgtgggtgtcatcaaaacagtggacaagaaggcagctgg 11468238

                                                                            
Query: 721      agctggcaaggtcaccaagtctgctcagaaagctcagaaggctaaatgaatattatcccc 780
                |||||||||||||||||||||||| |||||    ||     ||||||||||| |||||  
Sbjct: 11468237 agctggcaaggtcaccaagtctgcccagaa----ca-----ctaaatgaatactatcctt 11468187

                                                                            
Query: 781      aatacctgccaccccagtcttaatcagtggtggaagaacggtctcagaactgtttgtctc 840
                ||||  ||||| |||||||||||||| |||||||| | | |||||| |||| ||| ||||
Sbjct: 11468186 aatatttgcca-cccagtcttaatcaatggtggaaaagcagtctcaaaactatttctctc 11468128

                                                                            
Query: 841      aattggccatttaagtttaatagtaaaagactggttaatgataacaatgcatcgtaaaac 900
                || |  |||  ||||||||  ||| ||||| | ||||||||| ||  |||||| ||||||
Sbjct: 11468127 aactaaccacctaagtttagcagtcaaagagtagttaatgattactgtgcatcataaaac 11468068

                                                                            
Query: 901      cttcagaaggaaaggagaatgttttgtggaccatttgttttgtgtgtggcagtttttaag 960
                ||| ||||||||| |||| ||||||||||||||||  || ||| |||||||| |||||||
Sbjct: 11468067 cttaagaaggaaaagagagtgttttgtggaccattgtttatgtatgtggcag-ttttaag 11468009

                                                                            
Query: 961      ttattagtttttaaaatcagtactttttaatggaaacaacttgaccaaaaatctgtcaca 1020
                || ||||||  | ||||||||||||| ||||||||||||| | |||||||||||||||| 
Sbjct: 11468008 ttcttagttccttaaatcagtactttctaatggaaacaacctaaccaaaaatctgtcact 11467949

                                                
Query: 1021     gaattttgagacccattaaaa-aaagtttaat 1051
                |||||||||||| |||||||| ||||||||||
Sbjct: 11467948 gaattttgagactcattaaaacaaagtttaat 11467917



 Score =  210 bits (106), Expect = 1e-51
 Identities = 459/577 (79%), Gaps = 31/577 (5%)
 Strand = Plus / Minus

                                                                          
Query: 149    ggtggtattggtacagtccctgtgggccgagtggagaccggtgttctcaaacctggcatg 208
              |||||||||||||| |||||||||||  ||  |||||| |||||||||||||| ||  ||
Sbjct: 805050 ggtggtattggtactgtccctgtgggttgaagggagactggtgttctcaaaccaggtgtg 804991

                                                                          
Query: 209    gtggtcacctttgctccagtcaatgttacaactgaagtcaagtctgttgaaatgcaccat 268
                 ||||||||||||||| ||   ||||||||  ||||||||||||||| |||| |||||
Sbjct: 804990 tcagtcacctttgctccattcgtggttacaaccaaagtcaagtctgttgcaatgaaccat 804931

                                                                          
Query: 269    gaagctttgagtgaagcccttcctggggacaacgtgggctttaatgtcaaaaacgtgtct 328
              ||||||| || | |||| ||| |||||||||| |||||||| | |||||  || ||||| 
Sbjct: 804930 gaagctt-gaataaagcactttctggggacaatgtgggcttcactgtcaggaaggtgtca 804872

                                                                          
Query: 329    gtcaaagacgttcgtcgtggcaatgtggctggtgacagcaaaaatgacccacctatggaa 388
              |    ||| ||  || || ||| |||||||||||||||||||||||||||||  ||||||
Sbjct: 804871 g----agatgtctgttgtagcagtgtggctggtgacagcaaaaatgacccactgatggaa 804816

                                                                          
Query: 389    gcagctggctttacagctcaggtgattatcctgaaccatcctggccagatcagtgctggt 448
              ||| ||||||| |||||||| ||||||||| |||||||||| |  ||  |||||| ||| 
Sbjct: 804815 gcaactggcttcacagctcaagtgattatcttgaaccatccagaacaattcagtgttgga 804756

                                                                          
Query: 449    tacgcacctgtgctggattgccacacagctcacattgcctgcaagtttgctgaactgaag 508
              ||| |||||||||||||||   | |||||||||| ||   ||||||||||||| ||||||
Sbjct: 804755 tacacacctgtgctggattattatacagctcacactgttggcaagtttgctgagctgaag 804696

                                                                          
Query: 509    gagaagattgatcgtcgttctgggaaaaagctggaagatggccccaagttcttgaaatct 568
              | ||||| |||| |||                    ||||| ||||| |||||| |||||
Sbjct: 804695 g-gaagactgattgtc-------------------tgatggtcccaaattcttgtaatct 804656

                                                                          
Query: 569    ggtgatgctgccattgtcgatatggttcctggcaagcccatgtgtgttgagagcttctct 628
               |||||||||||||||| ||||  ||||||||||||||||| | | ||||||||  ||||
Sbjct: 804655 agtgatgctgccattgttgatacagttcctggcaagcccatatatattgagagcagctct 804596

                                                                          
Query: 629    gactatcctcctctgggccgatttgctgttcgtgacatgagacagacagttgctgtgggt 688
              ||||   ||||||||||  | ||||||||| ||||||||||| |||  |||||| |  ||
Sbjct: 804595 gact---ctcctctgggttgttttgctgtttgtgacatgagatagatggttgctttatgt 804539

                                                   
Query: 689    gtcatcaaagctgtggacaagaaggcagctggagctg 725
              |||| ||||   |||||||||||||||| ||||||||
Sbjct: 804538 gtcaccaaa---gtggacaagaaggcaggtggagctg 804505



 Score =  163 bits (82), Expect = 3e-37
 Identities = 231/278 (83%), Gaps = 7/278 (2%)
 Strand = Plus / Minus

                                                                            
Query: 141      acaaaattggtggtattggtacagtccctgtgggccgagtggagaccggtgttctcaaac 200
                ||||||||||||||  |||| | ||||||  ||| |  || ||||| |||||||||||||
Sbjct: 26413371 acaaaattggtggtggtggttctgtccctaagggtcaggttgagactggtgttctcaaac 26413312

                                                                            
Query: 201      ctggcatggtggtcacctttgctccagtcaatgttacaactgaagtcaagtctgttgaaa 260
                |||||||||||    ||||||||||| | | |||||||||||||||||||||| ||||||
Sbjct: 26413311 ctggcatggtgactccctttgctccaatgagtgttacaactgaagtcaagtctattgaaa 26413252

                                                                            
Query: 261      tgcaccatgaagctttgagtgaagcccttcctggggacaacgtgggctttaatgtcaaaa 320
                || ||   || |||||||||||| ||||||||||||||   |||||||| | |||||| |
Sbjct: 26413251 tgaactgcgatgctttgagtgaaacccttcctggggaccgtgtgggcttcagtgtcaaga 26413192

                                                                            
Query: 321      acgtgtctgtcaaagacgttcgtcgtggcaatgtggctggtgacagcaaaaatgacccac 380
                | |||||     |||| ||| ||| ||||| ||||| | |||||||||||||||||||||
Sbjct: 26413191 atgtgtc-----aagatgtt-gtcatggcagtgtggat-gtgacagcaaaaatgacccac 26413139

                                                      
Query: 381      ctatggaagcagctggctttacagctcaggtgattatc 418
                | |||||||| |||||||| |||||||| |||||||||
Sbjct: 26413138 caatggaagcggctggcttcacagctcaagtgattatc 26413101



 Score =  143 bits (72), Expect = 2e-31
 Identities = 167/198 (84%), Gaps = 3/198 (1%)
 Strand = Plus / Minus

                                                                            
Query: 242      gaagtcaagtctgttgaaatgcaccatgaagctttgagtgaagcccttcctggggacaac 301
                |||||||| |||||||||| ||||   ||||||| |||  |||  ||||||||||||   
Sbjct: 32035207 gaagtcaaatctgttgaaaggcacagggaagcttggaggaaagtgcttcctggggactgt 32035148

                                                                            
Query: 302      gtgggctttaatgtcaaaaacgtgtctgtcaaagacgttcgtcgtggcaatgtggctggt 361
                |||||||| |||||||| |  |||||||||||||| ||| ||| || || ||||||||||
Sbjct: 32035147 gtgggcttcaatgtcaagagtgtgtctgtcaaagatgtttgtcatgacagtgtggctggt 32035088

                                                                            
Query: 362      gacagcaaaaatgacccacctatggaagcagctggctttacagctcaggtgattatcctg 421
                |||||||||||||||||||| ||||||||||||||||| ||||||||    || ||| ||
Sbjct: 32035087 gacagcaaaaatgacccaccgatggaagcagctggcttcacagctca---aataatcttg 32035031

                                  
Query: 422      aaccatcctggccagatc 439
                |||||||| |||||||||
Sbjct: 32035030 aaccatccaggccagatc 32035013



 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 74/84 (88%), Gaps = 1/84 (1%)
 Strand = Plus / Minus

                                                                             
Query: 954       ttttaagttattagtttttaaaatcagtactttttaatggaaacaacttgaccaaaaatc 1013
                 |||||| || |||||||||||||||| ||||||| |||||||||||   || ||||||||
Sbjct: 197725883 ttttaatttcttagtttttaaaatcactactttt-aatggaaacaatacgaacaaaaatc 197725825

                                         
Query: 1014      tgtcacagaattttgagacccatt 1037
                 |||||||||||||| |||| ||||
Sbjct: 197725824 tgtcacagaattttaagacacatt 197725801



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 49/54 (90%), Gaps = 1/54 (1%)
 Strand = Plus / Minus

                                                                      
Query: 958      aagttattagtttttaaaa-tcagtactttttaatggaaacaacttgaccaaaa 1010
                ||||||||| ||||||||| |||||| |||| |||||||||||||| |||||||
Sbjct: 49376054 aagttattactttttaaaaatcagtatttttaaatggaaacaacttaaccaaaa 49376001


>Sscrofa_Chr07 
||          Length = 134764511

 Score =  377 bits (190), Expect = e-102
 Identities = 424/501 (84%), Gaps = 17/501 (3%)
 Strand = Plus / Minus

                                                                            
Query: 378      cacctatggaagcagctggctttacagctcaggtgattatcctgaaccatcctggccaga 437
                |||| ||||||||||||||||| | | |||||||||| ||| ||||| | || ||||| |
Sbjct: 81509545 caccaatggaagcagctggcttcaaaactcaggtgatcatcttgaactacccaggccaaa 81509486

                                                                            
Query: 438      tcagtgctggttacgcacctgtgctggattgccacacagctcacattgcctgcaagtttg 497
                |||||||||| ||| ||| ||||||| |||  ||||||||||||||||| ||||||| ||
Sbjct: 81509485 tcagtgctggatacacacatgtgctgaattctcacacagctcacattgcttgcaagtatg 81509426

                                                                            
Query: 498      ctgaactgaaggagaagattgatcgtcgttctgggaaaaagctggaagatggccccaagt 557
                |||| || ||| || |||||||| ||| |||||||| ||| ||||||||||||||||| |
Sbjct: 81509425 ctgagctaaagtaggagattgatggtcattctgggagaaatctggaagatggccccaaat 81509366

                                                                            
Query: 558      tcttgaaatctggtgatgctg----ccattgtcgatatggttcctggcaagc--ccatgt 611
                |||||||||||||||||||||    ||||  | ||||||| ||| || | |   ||||||
Sbjct: 81509365 tcttgaaatctggtgatgctggctgccatcattgatatggctcccggtatgattccatgt 81509306

                                                                            
Query: 612      gtgttgagagcttctctgactatcctcctctgggccgatttgctgttcgtgacatgagac 671
                |||||||||||||||||||||||||  |||||||||  |||||||||| |||||||||||
Sbjct: 81509305 gtgttgagagcttctctgactatccctctctgggccattttgctgttcatgacatgagac 81509246

                                                                            
Query: 672      agacagttgctgtgggtgtcatcaaagctgtggacaagaaggcagctggagctggcaagg 731
                || ||||||||||||||||||||||||| | |||| ||||||||||||||||| ||||||
Sbjct: 81509245 aggcagttgctgtgggtgtcatcaaagcaggggaccagaaggcagctggagctagcaagg 81509186

                                                                            
Query: 732      tcaccaagtctgctcagaaagctcagaaggctaaatgaatattatccccaatacctgcca 791
                 |||||||||||| ||||||||  |||         |||| ||||||||||||| | |||
Sbjct: 81509185 acaccaagtctgcccagaaagccaaga---------gaatgttatccccaatactttcca 81509135

                                                                            
Query: 792      ccccagtcttaatcagtggtggaagaacggtctcagaactgtttgtctcaattggccatt 851
                |||   | ||||||||||||||||||| |||| |||| || ||||||||||||||||  |
Sbjct: 81509134 ccc--attttaatcagtggtggaagaatggtcccagagctatttgtctcaattggccgct 81509077

                                     
Query: 852      taagtttaatagtaaaagact 872
                |||||||||||||||||||||
Sbjct: 81509076 taagtttaatagtaaaagact 81509056



 Score =  246 bits (124), Expect = 2e-62
 Identities = 452/552 (81%), Gaps = 17/552 (3%)
 Strand = Plus / Minus

                                                                            
Query: 439      cagtgctggttacgcacctgtgctggattgccacacagctcacattgcctgcaagtttgc 498
                ||||||||| || ||||||||| ||| | | |||||||||||| ||||  |||||||| |
Sbjct: 13579494 cagtgctggctaagcacctgtgttgggtggtcacacagctcaccttgctggcaagttttc 13579435

                                                                            
Query: 499      tgaactgaaggagaagattgatcgtcgttctgggaaa-aagctggaagatggccccaagt 557
                 || ||||| ||||||||||||  || ||||||| || |||||||||||||| | ||| |
Sbjct: 13579434 cgagctgaaagagaagattgatgatcattctggggaagaagctggaagatggtctcaaat 13579375

                                                                            
Query: 558      tcttgaaatctggtgatgctgccattgtcgatatggttcctggcaagcccatgtgtgttg 617
                | ||||||| ||||||||||||||| ||  |  |||| ||||| ||| ||||||||||||
Sbjct: 13579374 ttttgaaatatggtgatgctgccatcgttaaagtggtccctggaaaggccatgtgtgttg 13579315

                                                                            
Query: 618      agagcttctctgactatcctcctctgggccgatttgctgttcgtgacatgagacagacag 677
                ||||| ||||  |||| | || ||||||||  ||||||||| ||||| |||||  ||  |
Sbjct: 13579314 agagcatctccaactagcttcttctgggccattttgctgttggtgacttgagatggatgg 13579255

                                                                            
Query: 678      ttgctgtgggtgtcatcaaagctgtggacaagaaggcagctggagctggcaaggtcacca 737
                | | |||||||||||| ||||  ||| ||||||||| ||||||||||||||  |||||||
Sbjct: 13579254 tagttgtgggtgtcataaaagtagtgcacaagaaggtagctggagctggcactgtcacca 13579195

                                                                            
Query: 738      agtctgctcagaaagctcagaaggctaaatgaatattatccccaatacctgccaccccag 797
                |  || | |||||||||| ||||||||| ||||||  ||   | ||||||||||||| ||
Sbjct: 13579194 aacctccccagaaagctctgaaggctaagtgaata-cat--actatacctgccaccctag 13579138

                                                                            
Query: 798      tcttaatcagtggtggaagaacggtctcagaactgtttgtctcaattggccatttaagtt 857
                 ||||  |||| ||||||||| | |||||||||||||||  |||| ||||    || |||
Sbjct: 13579137 ccttagccagttgtggaagaatgttctcagaactgtttg--tcaactggc----taggtt 13579084

                                                                            
Query: 858      taatag-taaaagactggttaatgataacaatgcatcgtaaaaccttcagaaggaaagga 916
                 ||||| | |||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 13579083 gaatagttgaaagactggtcaatgataacaatgcatcataaaaccttcagaaggaaagga 13579024

                                                                            
Query: 917      ----gaatgttttgtggaccatttgttttgtgtgtggcagtttttaagttattagttttt 972
                    | ||| ||| ||||||||||||||||||| || ||  |||||||||| ||||||||
Sbjct: 13579023 aggggcatgctttatggaccatttgttttgtgt-tgaca-attttaagttactagttttt 13578966

                            
Query: 973      aaaatcagtact 984
                || || ||||||
Sbjct: 13578965 aacattagtact 13578954



 Score =  188 bits (95), Expect = 4e-45
 Identities = 176/203 (86%)
 Strand = Plus / Minus

                                                                            
Query: 2        atgccttggttcaagggatggaaagtcacccgtaaagatggcaatgccagtggaaccaca 61
                |||||||| ||||| |||| |||||||||| |||||||||| |||||||||||||||   
Sbjct: 81510642 atgccttgcttcaaaggatagaaagtcacctgtaaagatgggaatgccagtggaaccttg 81510583

                                                                            
Query: 62       ctgcttgaagctctggattgcattctaccaccaactcgtccaactgacaagcccttgcgc 121
                ||||||||||||||||||||||| || | ||||  | |||||||||||||| ||||| | 
Sbjct: 81510582 ctgcttgaagctctggattgcatcctgctaccagtttgtccaactgacaagtccttgtgt 81510523

                                                                            
Query: 122      ctgcccctccaggacgtctacaaaattggtggtattggtacagtccctgtgggccgagtg 181
                |||||||||||||| |||||||||||||||| || |||||| ||| ||||||  | ||||
Sbjct: 81510522 ctgcccctccaggatgtctacaaaattggtgttagtggtactgtctctgtggatcaagtg 81510463

                                       
Query: 182      gagaccggtgttctcaaacctgg 204
                || || |||||||||||||||||
Sbjct: 81510462 gaaactggtgttctcaaacctgg 81510440



 Score =  139 bits (70), Expect = 4e-30
 Identities = 153/180 (85%), Gaps = 3/180 (1%)
 Strand = Plus / Minus

                                                                            
Query: 197      aaacctggcatggtggtcacctttgctccagtcaatgttacaactgaagtcaagtctgtt 256
                ||||||||| ||||| ||||||||| |||||| |||||||||| |||||| ||||   | 
Sbjct: 81509985 aaacctggcttggtgatcacctttgttccagtgaatgttacaaatgaagtaaagt---tg 81509929

                                                                            
Query: 257      gaaatgcaccatgaagctttgagtgaagcccttcctggggacaacgtgggctttaatgtc 316
                |||||||||||||||||||||||||||| | ||||||||||||  ||||  || | | ||
Sbjct: 81509928 gaaatgcaccatgaagctttgagtgaaggctttcctggggacagtgtggctttcagtatc 81509869

                                                                            
Query: 317      aaaaacgtgtctgtcaaagacgttcgtcgtggcaatgtggctggtgacagcaaaaatgac 376
                |  || |||||||||||||| |||| | ||||||||| |||||||||||||| |||||||
Sbjct: 81509868 atgaatgtgtctgtcaaagatgttcattgtggcaatgaggctggtgacagcagaaatgac 81509809



 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                                
Query: 345      gtggcaatgtggctggtgacagcaaaaatgacccacctatggaagcag 392
                ||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 13579539 gtggcaatgtggctggtgacagcaaaaatgacccaccaatggaggcag 13579492



 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 66/74 (89%), Gaps = 3/74 (4%)
 Strand = Plus / Minus

                                                                            
Query: 954      ttttaagttattagtttttaaaatcagtactttttaatggaaacaacttgaccaaaaatc 1013
                ||||||||||||||||||| |||| ||||||||||||||  ||||| ||||||||| || 
Sbjct: 81508678 ttttaagttattagttttt-aaattagtactttttaatg--aacaatttgaccaaacatt 81508622

                              
Query: 1014     tgtcacagaatttt 1027
                ||||||||| ||||
Sbjct: 81508621 tgtcacagattttt 81508608


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 36,803,801
Number of extensions: 507
Number of successful extensions: 507
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 410
Number of HSP's successfully gapped: 130
Length of query: 1118
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1097
Effective length of database: 2,808,413,156
Effective search space: 3080829232132
Effective search space used: 3080829232132
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)