Animal-Genome cDNA 20110601C-001978


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001978
         (900 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001039642.1| leucine-rich alpha-2-glycoprotein [Bos tauru...   423   e-119
Alignment   gi|NP_001094702.1| carboxypeptidase N subunit 2 [Bos taurus].        137   1e-32
Alignment   gi|NP_001069431.1| insulin-like growth factor-binding protein c...   111   7e-25
Alignment   gi|XP_002684904.1| PREDICTED: glycoprotein V (platelet) [Bos ta...   110   2e-24
Alignment   gi|XP_002691418.1| PREDICTED: leucine rich repeat transmembrane...   105   5e-23
Alignment   gi|XP_876920.3| PREDICTED: leucine rich repeat transmembrane ne...   105   5e-23
Alignment   gi|NP_001096753.1| leucine-rich repeat transmembrane neuronal p...   100   2e-21
Alignment   gi|NP_776444.1| chondroadherin precursor [Bos taurus].               100   3e-21
Alignment   gi|XP_002693760.1| PREDICTED: reticulon 4 receptor-like 2-like ...    99   4e-21
Alignment   gi|XP_607470.4| PREDICTED: reticulon 4 receptor-like 2-like [Bo...    99   4e-21

>ref|NP_001039642.1| leucine-rich alpha-2-glycoprotein [Bos taurus].
          Length = 346

 Score =  423 bits (1088), Expect = e-119
 Identities = 214/271 (78%), Positives = 234/271 (86%)
 Frame = +3

Query: 57  EFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 236
           EFFNLTQ+PAD LQG+PNLQELHLS+N+LED S KFLLPVPQLKVLDLTRN+L  L PG 
Sbjct: 75  EFFNLTQLPADFLQGVPNLQELHLSSNRLEDFSPKFLLPVPQLKVLDLTRNSLTGLFPGF 134

Query: 237 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 416
           F+VSAAL TLVLK N+L  L+ASWL GLKALRHLDLS NQL +LP  LL NFTDL  LDL
Sbjct: 135 FRVSAALCTLVLKGNQLKFLEASWLHGLKALRHLDLSENQLHSLPPGLLENFTDLLTLDL 194

Query: 417 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 596
            NNQLQTLPPDLLRGPL LE LHLEGNRLQVL EG LAPQPKLRYLFLN+N+L ++AAGA
Sbjct: 195 SNNQLQTLPPDLLRGPLNLERLHLEGNRLQVLGEGLLAPQPKLRYLFLNDNRLASVAAGA 254

Query: 597 FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLV 776
           FRGLQ LDMLDLSNN LT+VP GLW SLGKAA N+K GFDIS NPWICDQ L DLYRWLV
Sbjct: 255 FRGLQKLDMLDLSNNLLTTVPTGLWTSLGKAARNLKDGFDISNNPWICDQNLADLYRWLV 314

Query: 777 ANEDKMFFQNNTHCAGPKALEGQTLLAVAAS 869
           ANE+KMFF+N+T CAGP+AL+GQTLLA A S
Sbjct: 315 ANENKMFFRNHTRCAGPEALKGQTLLAAAES 345


>ref|NP_001094702.1| carboxypeptidase N subunit 2 [Bos taurus].
          Length = 548

 Score =  137 bits (345), Expect = 1e-32
 Identities = 92/264 (34%), Positives = 128/264 (48%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           L  +P ++   +  LQ L LSNNQL  L       +  L+ L L  N++  LPP +F   
Sbjct: 181 LAYLPEELFHPLGRLQTLRLSNNQLASLPRGLFSRLGSLQELFLDGNSISELPPEVFAQL 240

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
           + L  L L+ N +  L  S    L  L  L L GN L+TLP  L      L  L L +NQ
Sbjct: 241 SCLEKLWLQHNAIGHLPGSVFSALPNLTFLSLQGNALQTLPAGLFTQSPGLVSLSLSHNQ 300

Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
           L+T+P         L  L L  N L  L  G       L  L+L++N LT L    F+ L
Sbjct: 301 LETVPEAAFANLTSLGSLMLSHNALTHLPAGVFRGLKGLVKLYLSSNNLTVLHPALFQNL 360

Query: 609 QVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANED 788
             L++L LS N LT++PEG++ +      +      + GNPW CD  L  L+ WL    D
Sbjct: 361 SKLELLSLSRNLLTTLPEGIFDT-----NDNLFNLALYGNPWQCDCHLAYLFSWLYQYSD 415

Query: 789 KMFFQNNTHCAGPKALEGQTLLAV 860
           ++ F   T+CAGP  L+GQ + A+
Sbjct: 416 RL-FNIQTYCAGPAYLKGQVVPAL 438



 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 54/165 (32%), Positives = 70/165 (42%)
 Frame = +3

Query: 237 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 416
           F  S  L  +V    R+         GL  L+ L+++G         + +N   L    L
Sbjct: 69  FSSSPNLTKVVFLNTRVCHFRPDAFGGLPGLQDLEITGGNFSNFSADIFSNLISLSKFTL 128

Query: 417 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 596
             N L+ LP  L +    LE L L+GNRLQ L +    P   L+ L L  N L  L    
Sbjct: 129 NFNMLEALPEGLFQHMDGLESLQLQGNRLQTLPQRLFQPLRCLKTLNLAQNLLAYLPEEL 188

Query: 597 FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNP 731
           F  L  L  L LSNN L S+P GL++ LG        G  IS  P
Sbjct: 189 FHPLGRLQTLRLSNNQLASLPRGLFSRLGSLQELFLDGNSISELP 233


>ref|NP_001069431.1| insulin-like growth factor-binding protein complex acid labile
            subunit [Bos taurus].
          Length = 611

 Score =  111 bits (278), Expect = 7e-25
 Identities = 93/285 (32%), Positives = 128/285 (44%), Gaps = 24/285 (8%)
 Frame = +3

Query: 69   LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
            L Q+P +   G+  L+ L L++NQL++L     L +  L VL+L+ N L+ LP   F+  
Sbjct: 331  LRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGL 390

Query: 249  AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
            A LH+L L+   L  L      GL  LR L L GN +  +  + L    +L  LDL  NQ
Sbjct: 391  AKLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQ 450

Query: 429  LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
            L  LP  L +   +LE+L L  NRL  L    L P  +  +L +++N+L  L A A   L
Sbjct: 451  LTHLPGRLFQDLGRLEYLLLARNRLSALPADALGPLQRTFWLDVSHNRLEALPAAALAPL 510

Query: 609  QVLDMLDLSNNSL-TSVP-----EGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRW 770
              L  L L NNSL T  P     E LW               + GNPW C   L  L  +
Sbjct: 511  SRLRFLSLRNNSLRTFAPQPPGLERLW---------------LEGNPWDCSCALGALRAF 555

Query: 771  LV---------------ANEDK---MFFQNNTHCAGPKALEGQTL 851
             +                N+D+   +   NN  CA P +L G  L
Sbjct: 556  ALQQPASVPRFVQALAEGNDDRQPPVLAYNNITCASPPSLAGLDL 600



 Score =  108 bits (269), Expect = 8e-24
 Identities = 74/207 (35%), Positives = 106/207 (51%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
           +LT +P    QG+  L+EL L+ N+L  L       + +L+ LDL+RN L+ +   +F  
Sbjct: 186 SLTVLPDTAFQGLAGLRELVLAGNKLAYLQPALFCGLGELRELDLSRNTLRSVKANVFVK 245

Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
              L  L L  N +  +      G+KALR LDLS N++ +L          LH+L L +N
Sbjct: 246 LPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHN 305

Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
            L  L P   +    LE L L  NRL+ L E   A   +L  L LN+N+L  L  G F G
Sbjct: 306 ALAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLG 365

Query: 606 LQVLDMLDLSNNSLTSVPEGLWASLGK 686
           L+ L +L+LS+N L  +PE  +  L K
Sbjct: 366 LRNLAVLNLSSNCLRDLPERAFQGLAK 392



 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 69/202 (34%), Positives = 104/202 (51%)
 Frame = +3

Query: 51  NREFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPP 230
           N +   L  +    L G+  L  LHL +N+L  L+A   L  P L  L L+ N L RL  
Sbjct: 109 NLQGSGLASLEPQALLGLRGLCHLHLEHNRLHALAAHTFLHTPGLASLGLSNNLLSRLDE 168

Query: 231 GLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHIL 410
           GLF+  A L  L L  N L +L  +  +GL  LR L L+GN+L  L   L     +L  L
Sbjct: 169 GLFRGLAHLWDLNLGWNSLTVLPDTAFQGLAGLRELVLAGNKLAYLQPALFCGLGELREL 228

Query: 411 DLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAA 590
           DL  N L+++  ++     KL+ L+L+ N +  +  G       LR+L L++N++ +L  
Sbjct: 229 DLSRNTLRSVKANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLE 288

Query: 591 GAFRGLQVLDMLDLSNNSLTSV 656
            +F GL  L +L LS+N+L  +
Sbjct: 289 DSFPGLLGLHVLRLSHNALAGL 310



 Score = 89.4 bits (220), Expect = 4e-18
 Identities = 79/245 (32%), Positives = 107/245 (43%), Gaps = 25/245 (10%)
 Frame = +3

Query: 27  CPLGAQKENREFFN-LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLT 203
           C LG  +E     N L  + A++   +P LQ+L+L +N +  ++    L +  L+ LDL+
Sbjct: 220 CGLGELRELDLSRNTLRSVKANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLS 279

Query: 204 RNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLL 383
            N +  L    F     LH L L  N L  L     + L  L  L L  N+LR LP +  
Sbjct: 280 HNRVGSLLEDSFPGLLGLHVLRLSHNALAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAF 339

Query: 384 ANFTDLHILDLGNNQLQTLPP--------------------DL----LRGPLKLEWLHLE 491
           A    L +L L +NQLQ L P                    DL     +G  KL  LHLE
Sbjct: 340 AGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGLAKLHSLHLE 399

Query: 492 GNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLW 671
           G  L  L     A    LR LFL  N +  +   +  GL  L  LDL+ N LT +P  L+
Sbjct: 400 GGCLARLGPLAFAGLSGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQLTHLPGRLF 459

Query: 672 ASLGK 686
             LG+
Sbjct: 460 QDLGR 464



 Score = 72.8 bits (177), Expect = 4e-13
 Identities = 60/170 (35%), Positives = 75/170 (44%)
 Frame = +3

Query: 177 PQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQ 356
           P  + L L  N    +P   F+  + L  L L+ + L  L+   L GL+ L HL L  N+
Sbjct: 79  PGTRALWLDGNNFSSIPAAAFRNLSGLGFLNLQGSGLASLEPQALLGLRGLCHLHLEHNR 138

Query: 357 LRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQ 536
           L  L      +   L  L L NN L  L   L RG   L  L+L  N L VL +      
Sbjct: 139 LHALAAHTFLHTPGLASLGLSNNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPDTAFQGL 198

Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 686
             LR L L  NKL  L    F GL  L  LDLS N+L SV   ++  L K
Sbjct: 199 AGLRELVLAGNKLAYLQPALFCGLGELRELDLSRNTLRSVKANVFVKLPK 248


>ref|XP_002684904.1| PREDICTED: glycoprotein V (platelet) [Bos taurus].
          Length = 583

 Score =  110 bits (274), Expect = 2e-24
 Identities = 88/292 (30%), Positives = 129/292 (44%), Gaps = 25/292 (8%)
 Frame = +3

Query: 66   NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
            NLT +P  +      LQ+L L +N+L  L +  L  +  L  L L  N L+ + PG F  
Sbjct: 181  NLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDR 240

Query: 246  SAALHTLVLKENRLDIL-DASWLRG-----------------------LKALRHLDLSGN 353
              +L +L L ENRL+ L  A +L                         +  LR L L   
Sbjct: 241  LRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLKST 300

Query: 354  QLRTLPRKLLANFTDLHILDLG-NNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLA 530
            QLRTLP     N T L +L++  + +L  LP D  RG  +L+ L L    L  L  G L 
Sbjct: 301  QLRTLPAAAFRNLTGLRVLEVSLSPRLSALPEDAFRGLGELQVLALSSTGLASLPAGLLR 360

Query: 531  PQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVG 710
               +LR++ L +N+L  L +  FR L  L+ + L +N L ++P   + +L + AG +   
Sbjct: 361  GLCRLRHVSLRSNRLRALPSALFRNLSSLEEVQLDHNQLETLPGDAFEALPRLAGVL--- 417

Query: 711  FDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLLAVAA 866
              +  NPW CD  L     WL  +   +       C GP    G+ L  + A
Sbjct: 418  --LGHNPWRCDCGLGPFLAWLRRHAGLVGRAEPPRCHGPGPHAGRLLWTLQA 467



 Score =  105 bits (262), Expect = 5e-23
 Identities = 75/207 (36%), Positives = 106/207 (51%), Gaps = 1/207 (0%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           L  +  ++ Q + +LQEL L+ NQL  L A     +  LK+LDL+ N L  LP GLF V 
Sbjct: 134 LKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQ 193

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
             L  L+L  NRL  L++  L  L+AL  L L  N LR++          L  L L  N+
Sbjct: 194 VKLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENR 253

Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
           L+ LP  L      L +L L  N L+ L +        LR L L + +L TL A AFR L
Sbjct: 254 LEFLPSALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNL 313

Query: 609 QVLDMLDLS-NNSLTSVPEGLWASLGK 686
             L +L++S +  L+++PE  +  LG+
Sbjct: 314 TGLRVLEVSLSPRLSALPEDAFRGLGE 340



 Score = 94.7 bits (234), Expect = 9e-20
 Identities = 68/187 (36%), Positives = 91/187 (48%)
 Frame = +3

Query: 111 LQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLD 290
           LQ L LS++ +  ++        +LK L L+RN +  LP  L      L  L L  N L 
Sbjct: 76  LQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNELK 135

Query: 291 ILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLK 470
            LD +  + L  L+ L L+ NQL  LP  L  +  +L +LDL  N L  LP  L    +K
Sbjct: 136 SLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVK 195

Query: 471 LEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLT 650
           L+ L L  NRL  LE G L     L  L L+ N L ++  GAF  L+ L  L LS N L 
Sbjct: 196 LQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLE 255

Query: 651 SVPEGLW 671
            +P  L+
Sbjct: 256 FLPSALF 262



 Score = 86.7 bits (213), Expect = 3e-17
 Identities = 62/185 (33%), Positives = 87/185 (47%)
 Frame = +3

Query: 126 LSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDAS 305
           L NN   D++         L+ L L+ + +  + PG F     L TL L  N++  L ++
Sbjct: 65  LQNNSFSDMTV--------LQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSA 116

Query: 306 WLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLH 485
            L  L  L  L L GN+L++L + L      L  L L  NQL  LP  L      L+ L 
Sbjct: 117 LLDNLVLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLD 176

Query: 486 LEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEG 665
           L GN L  L EG    Q KL+ L L++N+L +L +G    L+ L  L L  N L S+  G
Sbjct: 177 LSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPG 236

Query: 666 LWASL 680
            +  L
Sbjct: 237 AFDRL 241



 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 66/191 (34%), Positives = 88/191 (46%)
 Frame = +3

Query: 111 LQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLD 290
           L+ L LS N++  L +  L  +  L+ L L  N LK L   LF+    L  L L +N+L 
Sbjct: 100 LKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLA 159

Query: 291 ILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLK 470
            L AS    L  L+ LDLSGN L  LP  L      L  L L +N+L +L   LL     
Sbjct: 160 FLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRA 219

Query: 471 LEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLT 650
           L  L L  N L+ +  G       L  L L+ N+L  L +  F     L  L LS N L 
Sbjct: 220 LTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPLE 279

Query: 651 SVPEGLWASLG 683
            +P+ L+  +G
Sbjct: 280 ELPKVLFGEIG 290



 Score = 55.1 bits (131), Expect = 8e-08
 Identities = 42/134 (31%), Positives = 63/134 (47%)
 Frame = +3

Query: 327 LRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQ 506
           L H+ L      TL     ++ T L  L L ++ +  + P     P+KL+ L L  N++ 
Sbjct: 52  LTHILLFQMGRGTLQNNSFSDMTVLQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKIT 111

Query: 507 VLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 686
            L    L     L  LFL+ N+L +L    F+ L  L  L L+ N L  +P  L+  L  
Sbjct: 112 HLPSALLDNLVLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHL-- 169

Query: 687 AAGNMKVGFDISGN 728
             GN+K+  D+SGN
Sbjct: 170 --GNLKL-LDLSGN 180


>ref|XP_002691418.1| PREDICTED: leucine rich repeat transmembrane neuronal 2-like [Bos
           taurus].
          Length = 535

 Score =  105 bits (262), Expect = 5e-23
 Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 27/286 (9%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           ++ +  D  QGI  L+EL LS+N++  L  K   PVP L+ LDL+ N L+ L    FK  
Sbjct: 97  ISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRSLDLSYNKLQSLQSEQFK-- 154

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
                                 GL+ L  L L  N L+T+P ++  +  +L  LDLG N+
Sbjct: 155 ----------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNR 192

Query: 429 LQTLPPDLLRGPLKLEWLHLE------------------------GNRLQVLEEGFLAPQ 536
           L++L  +   G LKL+ LHLE                         NR++ + +G     
Sbjct: 193 LRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTW 252

Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASLGKAAGNMKV 707
             L  L L+ N +  +  G F+ L  L  L+L +N LT++ +     W SL        +
Sbjct: 253 SSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL--------I 304

Query: 708 GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
              +SGN W C + +  L+ WL     K   ++   CAGPK ++G+
Sbjct: 305 SITLSGNMWECSRSICPLFYWL--KNFKGNKESTMICAGPKHMQGE 348


>ref|XP_876920.3| PREDICTED: leucine rich repeat transmembrane neuronal 2-like
           isoform 3 [Bos taurus].
          Length = 535

 Score =  105 bits (262), Expect = 5e-23
 Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 27/286 (9%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           ++ +  D  QGI  L+EL LS+N++  L  K   PVP L+ LDL+ N L+ L    FK  
Sbjct: 97  ISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRSLDLSYNKLQSLQSEQFK-- 154

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
                                 GL+ L  L L  N L+T+P ++  +  +L  LDLG N+
Sbjct: 155 ----------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNR 192

Query: 429 LQTLPPDLLRGPLKLEWLHLE------------------------GNRLQVLEEGFLAPQ 536
           L++L  +   G LKL+ LHLE                         NR++ + +G     
Sbjct: 193 LRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTW 252

Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASLGKAAGNMKV 707
             L  L L+ N +  +  G F+ L  L  L+L +N LT++ +     W SL        +
Sbjct: 253 SSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL--------I 304

Query: 708 GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
              +SGN W C + +  L+ WL     K   ++   CAGPK ++G+
Sbjct: 305 SITLSGNMWECSRSICPLFYWL--KNFKGNKESTMICAGPKHMQGE 348


>ref|NP_001096753.1| leucine-rich repeat transmembrane neuronal protein 3 [Bos taurus].
          Length = 536

 Score =  100 bits (248), Expect = 2e-21
 Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 28/291 (9%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
           +L ++  +  +G+  L  L+L +N + ++       + +LK L L+ N +       F+ 
Sbjct: 72  SLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRP 131

Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
              L  L L  N+L  L +   RGL+ L  L L  N LRT+P ++  +  +L +LDLG N
Sbjct: 132 VTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYN 191

Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA---AGA 596
           ++++L  ++  G ++L+ LHLE N+   L          L+ L+L  NK++ +    +  
Sbjct: 192 RIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKISVIGQTMSWT 251

Query: 597 FRGLQVLDM----------------------LDLSNNSLTSVPEGL---WASLGKAAGNM 701
           +  LQ LD+                      L+L +N LT + + +   W SL       
Sbjct: 252 WSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLN------ 305

Query: 702 KVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLL 854
                ++GN W C + +  L  WL     K   +N   CA PK L+G  ++
Sbjct: 306 --DISLAGNIWECSRNICSLVNWL--KSFKGLRENTIICASPKELQGVNVI 352



 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 50/163 (30%), Positives = 74/163 (45%)
 Frame = +3

Query: 192 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 371
           L L  N+L++L    FK    L  L L  N +  +D +   G++ L+ L LS N++    
Sbjct: 66  LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125

Query: 372 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 551
                  T+L  LDL  NQL +L  +  RG  KL  LHL  N L+ +          L  
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLEL 185

Query: 552 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
           L L  N++ +LA   F G+  L  L L +N  + +   L+  L
Sbjct: 186 LDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRL 228


>ref|NP_776444.1| chondroadherin precursor [Bos taurus].
          Length = 361

 Score = 99.8 bits (247), Expect = 3e-21
 Identities = 81/297 (27%), Positives = 122/297 (41%), Gaps = 46/297 (15%)
 Frame = +3

Query: 93  LQGIPNLQE----LHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 260
           LQ IP + E    L+L  N    L+      +P L  L L    ++ +  G F+    L 
Sbjct: 45  LQKIPKVSEKTKLLNLQRNNFPVLATNSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLI 104

Query: 261 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 440
            L L  N + +L A     L  L +L L  N++  LPR LL+   +L IL L NN+++ L
Sbjct: 105 YLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIREL 164

Query: 441 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 620
                +G   L WL+L  N L  L+ G L     L   +L+ N+L++  + A   L+V++
Sbjct: 165 RSGAFQGAKDLRWLYLSENSLSSLQPGALDDVENLAKFYLDRNQLSSYPSAALSKLRVVE 224

Query: 621 MLDLSNNSLTSVPEGLWASLGKAAGNM--------------------------------- 701
            L LS+N L S+P+  + S G+    +                                 
Sbjct: 225 ELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLHQ 284

Query: 702 ---KVGFD------ISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
                 FD      ++ NPW C  +L  L RWL A   +     +  CA P    GQ
Sbjct: 285 LPSNFPFDSLETLTLTNNPWKCTCQLRGLRRWLEAKTSR----PDATCASPAKFRGQ 337


>ref|XP_002693760.1| PREDICTED: reticulon 4 receptor-like 2-like [Bos taurus].
          Length = 448

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 84/253 (33%), Positives = 110/253 (43%), Gaps = 1/253 (0%)
 Frame = +3

Query: 105 PNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENR 284
           P  Q L L NN +  L        P L  L L  N L  + PG F+   AL  L L +NR
Sbjct: 88  PGTQRLFLQNNLIGALRPGSF--GPSLLTLWLFSNNLSAIYPGTFRHLQALEELDLGDNR 145

Query: 285 -LDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRG 461
            L  L+    +GL+ L+ L L   QL +LP  +      L  L L  N L  L  DL   
Sbjct: 146 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFAD 205

Query: 462 PLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNN 641
              L  L L GNRL++L E        L  L L+ N+L  +   AFRGL  L +L L NN
Sbjct: 206 LANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLGRLTILYLFNN 265

Query: 642 SLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCA 821
           SL S+P    A L            ++ NPW CD +   L+ W    +      ++  CA
Sbjct: 266 SLASLPGEALADLPSLE-----FLRLNANPWACDCRARPLWAWF---QRARVSSSDVTCA 317

Query: 822 GPKALEGQTLLAV 860
            P    G+ L A+
Sbjct: 318 SPPERRGRDLRAL 330



 Score = 72.0 bits (175), Expect = 7e-13
 Identities = 53/144 (36%), Positives = 67/144 (46%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
           +L  +  D  QG+  LQ LHL   QL  L       +  L+ L L  N+L  L   LF  
Sbjct: 146 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFAD 205

Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
            A L  L L  NRL +L     RGL +L  L L GN+L+ + R        L IL L NN
Sbjct: 206 LANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLGRLTILYLFNN 265

Query: 426 QLQTLPPDLLRGPLKLEWLHLEGN 497
            L +LP + L     LE+L L  N
Sbjct: 266 SLASLPGEALADLPSLEFLRLNAN 289


>ref|XP_607470.4| PREDICTED: reticulon 4 receptor-like 2-like [Bos taurus].
          Length = 460

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 84/253 (33%), Positives = 110/253 (43%), Gaps = 1/253 (0%)
 Frame = +3

Query: 105 PNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENR 284
           P  Q L L NN +  L        P L  L L  N L  + PG F+   AL  L L +NR
Sbjct: 100 PGTQRLFLQNNLIGALRPGSF--GPSLLTLWLFSNNLSAIYPGTFRHLQALEELDLGDNR 157

Query: 285 -LDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRG 461
            L  L+    +GL+ L+ L L   QL +LP  +      L  L L  N L  L  DL   
Sbjct: 158 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFAD 217

Query: 462 PLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNN 641
              L  L L GNRL++L E        L  L L+ N+L  +   AFRGL  L +L L NN
Sbjct: 218 LANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLGRLTILYLFNN 277

Query: 642 SLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCA 821
           SL S+P    A L            ++ NPW CD +   L+ W    +      ++  CA
Sbjct: 278 SLASLPGEALADLPSLE-----FLRLNANPWACDCRARPLWAWF---QRARVSSSDVTCA 329

Query: 822 GPKALEGQTLLAV 860
            P    G+ L A+
Sbjct: 330 SPPERRGRDLRAL 342



 Score = 72.0 bits (175), Expect = 7e-13
 Identities = 53/144 (36%), Positives = 67/144 (46%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
           +L  +  D  QG+  LQ LHL   QL  L       +  L+ L L  N+L  L   LF  
Sbjct: 158 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFAD 217

Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
            A L  L L  NRL +L     RGL +L  L L GN+L+ + R        L IL L NN
Sbjct: 218 LANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLGRLTILYLFNN 277

Query: 426 QLQTLPPDLLRGPLKLEWLHLEGN 497
            L +LP + L     LE+L L  N
Sbjct: 278 SLASLPGEALADLPSLEFLRLNAN 301


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 38,326,778
Number of extensions: 1252576
Number of successful extensions: 10423
Number of sequences better than 1.0e-05: 223
Number of HSP's gapped: 8924
Number of HSP's successfully gapped: 754
Length of query: 300
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 198
Effective length of database: 14,306,398
Effective search space: 2832666804
Effective search space used: 2832666804
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001978
         (900 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_854692.1| PREDICTED: similar to leucine-rich alpha-2-glyc...   412   e-115
Alignment   gi|XP_545165.2| PREDICTED: similar to Carboxypeptidase N subuni...   136   2e-32
Alignment   gi|XP_545164.2| PREDICTED: similar to leucine rich repeat conta...   126   2e-29
Alignment   gi|XP_538355.2| PREDICTED: similar to Ran GTPase-activating pro...   117   1e-26
Alignment   gi|XP_852514.1| PREDICTED: similar to Leucine-rich repeat trans...   105   8e-23
Alignment   gi|XP_540206.2| PREDICTED: similar to Leucine-rich repeat trans...   105   8e-23
Alignment   gi|XP_547189.2| PREDICTED: similar to insulin-like growth facto...   104   1e-22
Alignment   gi|XP_852404.1| PREDICTED: similar to Chondroadherin precursor ...   102   5e-22
Alignment   gi|XP_542026.2| PREDICTED: similar to Fibromodulin precursor (F...   100   1e-21
Alignment   gi|XP_546127.2| PREDICTED: similar to Leucine-rich repeat trans...   100   2e-21

>ref|XP_854692.1| PREDICTED: similar to leucine-rich alpha-2-glycoprotein 1 [Canis
           familiaris].
          Length = 347

 Score =  412 bits (1058), Expect = e-115
 Identities = 209/271 (77%), Positives = 231/271 (85%)
 Frame = +3

Query: 57  EFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 236
           EFFNLTQ+  D LQG+ NLQELHLS NQLE LS K LLPVP LKVLDLTRNAL +LPPGL
Sbjct: 76  EFFNLTQLRPDTLQGVSNLQELHLSTNQLESLSPKLLLPVPLLKVLDLTRNALTQLPPGL 135

Query: 237 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 416
           F+VSAALHTLVLKENRL++L+ SWL GLKAL HLDLSGN L+TLP  LLAN T L ILDL
Sbjct: 136 FRVSAALHTLVLKENRLEVLEPSWLCGLKALGHLDLSGNHLQTLPPGLLANVTALRILDL 195

Query: 417 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 596
            NNQL+TLP DLLRGPL+LE LHLEGNRLQVLEEG LAPQP LRYLFL++NKL  +AAGA
Sbjct: 196 SNNQLKTLPLDLLRGPLQLERLHLEGNRLQVLEEGLLAPQPGLRYLFLSDNKLAAVAAGA 255

Query: 597 FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLV 776
           FRGLQ LDMLDLSNNSLTSVP+GLW SLG+   +M+ GFDISGNPWICD  LDDLYRWLV
Sbjct: 256 FRGLQQLDMLDLSNNSLTSVPKGLWTSLGQPTRDMEDGFDISGNPWICDHNLDDLYRWLV 315

Query: 777 ANEDKMFFQNNTHCAGPKALEGQTLLAVAAS 869
           AN+DKMF +N+T CA P+AL+GQTLL  A S
Sbjct: 316 ANKDKMFSRNDTRCARPEALKGQTLLEAAES 346



 Score = 82.0 bits (201), Expect = 7e-16
 Identities = 55/132 (41%), Positives = 71/132 (53%)
 Frame = +3

Query: 264 LVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLP 443
           LV++   L  L    L+G+  L+ L LS NQL +L  KLL     L +LDL  N L  LP
Sbjct: 73  LVVEFFNLTQLRPDTLQGVSNLQELHLSTNQLESLSPKLLLPVPLLKVLDLTRNALTQLP 132

Query: 444 PDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDM 623
           P L R    L  L L+ NRL+VLE  +L     L +L L+ N L TL  G    +  L +
Sbjct: 133 PGLFRVSAALHTLVLKENRLEVLEPSWLCGLKALGHLDLSGNHLQTLPPGLLANVTALRI 192

Query: 624 LDLSNNSLTSVP 659
           LDLSNN L ++P
Sbjct: 193 LDLSNNQLKTLP 204


>ref|XP_545165.2| PREDICTED: similar to Carboxypeptidase N subunit 2 precursor
            (Carboxypeptidase N polypeptide 2) (Carboxypeptidase N 83
            kDa chain) (Carboxypeptidase N regulatory subunit)
            (Carboxypeptidase N large subunit) [Canis familiaris].
          Length = 547

 Score =  136 bits (343), Expect = 2e-32
 Identities = 99/310 (31%), Positives = 143/310 (46%), Gaps = 44/310 (14%)
 Frame = +3

Query: 63   FNLTQ-MPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLF 239
            FNL + +P  +   +  L+ L L  N+L+ L  +   P+ +L+ L+L +N L  LP GLF
Sbjct: 130  FNLLEALPEGLFGHMEALESLQLQGNRLQSLPRRLFQPLTRLQSLNLAQNLLAHLPEGLF 189

Query: 240  KVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLG 419
                +L TL L +N L  L      GL +LR L L GN +  LP  + +    L  L L 
Sbjct: 190  DPLGSLQTLRLSDNALSGLPPGVFGGLHSLRELFLDGNSISELPPGVFSRLFRLEQLWLQ 249

Query: 420  NNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAF 599
             N +  LP  +      L +L L+GN L+VL  G  AP P L  L L+ NKL  ++ GAF
Sbjct: 250  RNAIGHLPLSVFSSLGNLTFLSLQGNALRVLPAGLFAPTPGLLVLSLSYNKLEAVSEGAF 309

Query: 600  RGLQVLDMLDLSNNSLTSVPEG--------------------LWASLGKAAGNMKV---- 707
              L  L  L LS+N++T +P G                    L  +L +   N+++    
Sbjct: 310  ANLSSLSSLTLSHNAITHLPAGVFRGLEGLVKLYLGSNNLTALHPTLFQNLSNLELLSLS 369

Query: 708  -------------------GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPK 830
                                  + GNPW CD  L  L++WL    D++ F   T+CAGP 
Sbjct: 370  RNLLTTLPTGIFDSNYNLFNLALHGNPWQCDCHLAYLFQWLYQYSDRL-FNIQTYCAGPA 428

Query: 831  ALEGQTLLAV 860
             L+GQ L A+
Sbjct: 429  YLKGQVLPAL 438



 Score = 91.7 bits (226), Expect = 9e-19
 Identities = 73/245 (29%), Positives = 103/245 (42%), Gaps = 25/245 (10%)
 Frame = +3

Query: 24  PCPLGAQKENREFF----NLTQMPADI---------------------LQGIPNLQELHL 128
           PCP G     +E F     L  +P DI                       G PNL ++  
Sbjct: 21  PCPAGCDCFAQELFCSDAGLAAVPPDIPPLATDIVFVETSLSALGSRAFSGSPNLTKVVF 80

Query: 129 SNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASW 308
            N  L+ L       +P+L+ L++T  A   L    F    +L       N L+ L    
Sbjct: 81  LNAPLQHLGPDAFGGLPRLQDLEVTGGAFTNLSSAAFSNLTSLGKFTFNFNLLEALPEGL 140

Query: 309 LRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHL 488
              ++AL  L L GN+L++LPR+L    T L  L+L  N L  LP  L      L+ L L
Sbjct: 141 FGHMEALESLQLQGNRLQSLPRRLFQPLTRLQSLNLAQNLLAHLPEGLFDPLGSLQTLRL 200

Query: 489 EGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGL 668
             N L  L  G       LR LFL+ N ++ L  G F  L  L+ L L  N++  +P  +
Sbjct: 201 SDNALSGLPPGVFGGLHSLRELFLDGNSISELPPGVFSRLFRLEQLWLQRNAIGHLPLSV 260

Query: 669 WASLG 683
           ++SLG
Sbjct: 261 FSSLG 265


>ref|XP_545164.2| PREDICTED: similar to leucine rich repeat containing 15 [Canis
            familiaris].
          Length = 614

 Score =  126 bits (317), Expect = 2e-29
 Identities = 84/271 (30%), Positives = 126/271 (46%)
 Frame = +3

Query: 48   ENREFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLP 227
            ENR    L+++P     G  NLQEL L  NQ+  LS         L+ L L+ N + +LP
Sbjct: 237  ENR----LSEIPMGTFDGCGNLQELALQQNQIGMLSPGLFHNNRNLQKLYLSNNHISQLP 292

Query: 228  PGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHI 407
            PG+F     L+ L L  N L  L       +  LR L L  N + +LP  + +N   L +
Sbjct: 293  PGIFMQLPQLNRLTLFGNSLKELSPGIFGPMHNLRELWLYDNHITSLPDNVFSNLHQLQV 352

Query: 408  LDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA 587
            L L  NQ+  + PD   G ++L  L L  N LQ L+         L+ + L NN+L  L 
Sbjct: 353  LILSRNQINYISPDAFNGLVELRELSLHTNALQELDGSVFRMLVNLQNISLQNNRLRQLP 412

Query: 588  AGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYR 767
               F  +  L  + L NN L ++P G++  LG           +  NPW CD  +  L+ 
Sbjct: 413  GNIFANVNGLMTIQLQNNQLENLPMGIFDHLGNLC-----ELRLYDNPWRCDSDILPLHN 467

Query: 768  WLVANEDKMFFQNNTHCAGPKALEGQTLLAV 860
            WL+ N+ ++       C  P ++ GQ+L+ +
Sbjct: 468  WLLLNKPRLGTDTLPVCFSPPSVRGQSLIII 498



 Score = 89.0 bits (219), Expect = 6e-18
 Identities = 65/204 (31%), Positives = 95/204 (46%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           L  +P  + QG+ NL+ L LS+NQL  +          LK L L  N L+ +P G+F   
Sbjct: 144 LQVLPIGLFQGLNNLESLLLSSNQLVQIQPAHFSQFSNLKELQLHGNHLEYIPDGVFDHL 203

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
             L  L L +N L  L     + L  L+ L L  N+L  +P        +L  L L  NQ
Sbjct: 204 VGLTKLNLGKNSLTHLSPRIFQRLGNLQVLRLYENRLSEIPMGTFDGCGNLQELALQQNQ 263

Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
           +  L P L      L+ L+L  N +  L  G     P+L  L L  N L  L+ G F  +
Sbjct: 264 IGMLSPGLFHNNRNLQKLYLSNNHISQLPPGIFMQLPQLNRLTLFGNSLKELSPGIFGPM 323

Query: 609 QVLDMLDLSNNSLTSVPEGLWASL 680
             L  L L +N +TS+P+ ++++L
Sbjct: 324 HNLRELWLYDNHITSLPDNVFSNL 347



 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 2/221 (0%)
 Frame = +3

Query: 24  PCPLGAQKENREFFN--LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLD 197
           P PL     + +  N  +T++       I  L  L +  N+L  +       +  L+ L 
Sbjct: 79  PAPLPWNAMSLQILNTHITELNESPFLNISALIALRIEKNELSHIMPGAFRNLGSLRYLS 138

Query: 198 LTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRK 377
           L  N L+ LP GLF+    L +L+L  N+L  +  +       L+ L L GN L  +P  
Sbjct: 139 LANNKLQVLPIGLFQGLNNLESLLLSSNQLVQIQPAHFSQFSNLKELQLHGNHLEYIPDG 198

Query: 378 LLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLF 557
           +  +   L  L+LG N L  L P + +    L+ L L  NRL  +  G       L+ L 
Sbjct: 199 VFDHLVGLTKLNLGKNSLTHLSPRIFQRLGNLQVLRLYENRLSEIPMGTFDGCGNLQELA 258

Query: 558 LNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
           L  N++  L+ G F   + L  L LSNN ++ +P G++  L
Sbjct: 259 LQQNQIGMLSPGLFHNNRNLQKLYLSNNHISQLPPGIFMQL 299



 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 56/204 (27%), Positives = 95/204 (46%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           L+ +     + + +L+ L L+NN+L+ L       +  L+ L L+ N L ++ P  F   
Sbjct: 120 LSHIMPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLNNLESLLLSSNQLVQIQPAHFSQF 179

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
           + L  L L  N L+ +       L  L  L+L  N L  L  ++     +L +L L  N+
Sbjct: 180 SNLKELQLHGNHLEYIPDGVFDHLVGLTKLNLGKNSLTHLSPRIFQRLGNLQVLRLYENR 239

Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
           L  +P     G   L+ L L+ N++ +L  G       L+ L+L+NN ++ L  G F  L
Sbjct: 240 LSEIPMGTFDGCGNLQELALQQNQIGMLSPGLFHNNRNLQKLYLSNNHISQLPPGIFMQL 299

Query: 609 QVLDMLDLSNNSLTSVPEGLWASL 680
             L+ L L  NSL  +  G++  +
Sbjct: 300 PQLNRLTLFGNSLKELSPGIFGPM 323



 Score = 68.9 bits (167), Expect = 6e-12
 Identities = 54/192 (28%), Positives = 80/192 (41%)
 Frame = +3

Query: 108 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 287
           N   L + N  + +L+    L +  L  L + +N L  + PG F                
Sbjct: 85  NAMSLQILNTHITELNESPFLNISALIALRIEKNELSHIMPGAF---------------- 128

Query: 288 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 467
                   R L +LR+L L+ N+L+ LP  L     +L  L L +NQL  + P       
Sbjct: 129 --------RNLGSLRYLSLANNKLQVLPIGLFQGLNNLESLLLSSNQLVQIQPAHFSQFS 180

Query: 468 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 647
            L+ L L GN L+ + +G       L  L L  N LT L+   F+ L  L +L L  N L
Sbjct: 181 NLKELQLHGNHLEYIPDGVFDHLVGLTKLNLGKNSLTHLSPRIFQRLGNLQVLRLYENRL 240

Query: 648 TSVPEGLWASLG 683
           + +P G +   G
Sbjct: 241 SEIPMGTFDGCG 252


>ref|XP_538355.2| PREDICTED: similar to Ran GTPase-activating protein 1 [Canis
            familiaris].
          Length = 1323

 Score =  117 bits (294), Expect = 1e-26
 Identities = 92/271 (33%), Positives = 135/271 (49%), Gaps = 2/271 (0%)
 Frame = +3

Query: 69   LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
            + ++ A  L G+ +L  L+LS+N+L  LSA  L   P+L  L L RN  +R+P    +  
Sbjct: 1040 IAELEAGALAGLASLIYLYLSDNRLAGLSAAALEGAPRLAYLYLERNRFQRVPGTALRAL 1099

Query: 249  AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
              L +L L+ N ++ L+   L G +ALR L LS N++  +    +    DL  L L  NQ
Sbjct: 1100 PGLFSLHLQHNAVERLEPGDLAGSQALRWLYLSANRISHVSPGAIGPAPDLEKLYLDRNQ 1159

Query: 429  LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP-KLRYLFLNNNKLTTLAAGAFRG 605
            LQ +P   L G   L  L L GN L+ L +G   P    L++LFLN++ L  ++  AF G
Sbjct: 1160 LQGVPTVALEGLPTLLELQLSGNPLRALPDGAFRPVGGSLQHLFLNSSGLEQISPRAFSG 1219

Query: 606  LQV-LDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVAN 782
            L   L  L L  N L ++P     S  +         D+SGNP+ CD +L  L+RWL+  
Sbjct: 1220 LGPWLQSLHLQKNQLQAMPALPHLSQLEL-------IDLSGNPFHCDCQLLPLHRWLIG- 1271

Query: 783  EDKMFFQNNTHCAGPKALEGQTLLAVAASLE 875
               +  +    CA P +  GQ + A  A  E
Sbjct: 1272 ---LNLRVGATCATPPSAHGQRVKAATAVFE 1299



 Score =  100 bits (250), Expect = 1e-21
 Identities = 88/258 (34%), Positives = 116/258 (44%)
 Frame = +3

Query: 96   QGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 275
            +G+  LQ L+L++N+L  L  + L  +  L+ LDL RN L+ L PG F    AL TL L 
Sbjct: 689  RGLGRLQILNLASNRLSSLPQEALDGLGSLQRLDLERNVLEELRPGTFGALGALTTLNLA 748

Query: 276  ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 455
             N L  L A   +GL   R L LS N L  L  + LA    L  L L +N+LQ LP   L
Sbjct: 749  HNALVYLPAMTFQGLPRARWLRLSHNALSVLDPEALAGLPALRRLSLQHNELQALPGLAL 808

Query: 456  RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 635
                 L  L L  N    + E      P LR L L +  L  L A AF     L  LDL 
Sbjct: 809  SQARALARLELGHNPFTYVGEEDGLALPGLRELTLEHGALQALDARAFARCPRLHTLDLR 868

Query: 636  NNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTH 815
             N L +VP        +  G ++    + GNP  C  +   L  WL     +    ++  
Sbjct: 869  GNQLDTVPP------LQGPGQLR-RLRLHGNPLWCGCRARPLLEWLA----RARVHSDGA 917

Query: 816  CAGPKALEGQTLLAVAAS 869
            C GP+ L G+ L A+  S
Sbjct: 918  CRGPRRLGGEALDALRPS 935



 Score = 84.3 bits (207), Expect = 1e-16
 Identities = 68/200 (34%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
 Frame = +3

Query: 66   NLTQMPADILQGIPNL-QELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFK 242
            NLT++P      +P L Q L L  N L+ +       +P L  LDL    ++ +  G F+
Sbjct: 634  NLTEVP----DAVPELTQRLDLQGNLLKVIPPAAFRDLPYLTHLDLRHCQVELVAEGAFR 689

Query: 243  VSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGN 422
                L  L L  NRL  L    L GL +L+ LDL  N L  L          L  L+L +
Sbjct: 690  GLGRLQILNLASNRLSSLPQEALDGLGSLQRLDLERNVLEELRPGTFGALGALTTLNLAH 749

Query: 423  NQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFR 602
            N L  LP    +G  +  WL L  N L VL+   LA  P LR L L +N+L  L   A  
Sbjct: 750  NALVYLPAMTFQGLPRARWLRLSHNALSVLDPEALAGLPALRRLSLQHNELQALPGLALS 809

Query: 603  GLQVLDMLDLSNNSLTSVPE 662
              + L  L+L +N  T V E
Sbjct: 810  QARALARLELGHNPFTYVGE 829



 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 54/145 (37%), Positives = 69/145 (47%)
 Frame = +3

Query: 69   LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
            L  +PA   QG+P  + L LS+N L  L  + L  +P L+ L L  N L+ LP      +
Sbjct: 752  LVYLPAMTFQGLPRARWLRLSHNALSVLDPEALAGLPALRRLSLQHNELQALPGLALSQA 811

Query: 249  AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
             AL  L L  N    +       L  LR L L    L+ L  +  A    LH LDL  NQ
Sbjct: 812  RALARLELGHNPFTYVGEEDGLALPGLRELTLEHGALQALDARAFARCPRLHTLDLRGNQ 871

Query: 429  LQTLPPDLLRGPLKLEWLHLEGNRL 503
            L T+PP  L+GP +L  L L GN L
Sbjct: 872  LDTVPP--LQGPGQLRRLRLHGNPL 894



 Score = 58.5 bits (140), Expect = 8e-09
 Identities = 51/169 (30%), Positives = 77/169 (45%)
 Frame = +3

Query: 183  LKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLR 362
            LK LD    A +R PP     +   H     +N  ++ DA      +  + LDL GN L+
Sbjct: 603  LKDLDGAGTA-QRCPPTCVCDNPRRHVACRHQNLTEVPDAV----PELTQRLDLQGNLLK 657

Query: 363  TLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPK 542
             +P     +   L  LDL + Q++ +     RG  +L+ L+L  NRL  L +  L     
Sbjct: 658  VIPPAAFRDLPYLTHLDLRHCQVELVAEGAFRGLGRLQILNLASNRLSSLPQEALDGLGS 717

Query: 543  LRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKA 689
            L+ L L  N L  L  G F  L  L  L+L++N+L  +P   +  L +A
Sbjct: 718  LQRLDLERNVLEELRPGTFGALGALTTLNLAHNALVYLPAMTFQGLPRA 766


>ref|XP_852514.1| PREDICTED: similar to Leucine-rich repeat transmembrane neuronal
           protein 4 precursor isoform 2 [Canis familiaris].
          Length = 519

 Score =  105 bits (261), Expect = 8e-23
 Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 27/286 (9%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           ++ +  D  QGI  L+EL LS+N++  L  K   PVP L+ LDL+ N L+ L    FK  
Sbjct: 98  ISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFK-- 155

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
                                 GL+ L  L L  N L+T+P ++  +  +L  LDLG N+
Sbjct: 156 ----------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNR 193

Query: 429 LQTLPPDLLRGPLKLEWLHLE------------------------GNRLQVLEEGFLAPQ 536
           L++L  +   G LKL+ LHLE                         NR++ + +G     
Sbjct: 194 LRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTW 253

Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASLGKAAGNMKV 707
             L  L L+ N +  +  G F+ L  L  L+L +N LT++ +     W SL        +
Sbjct: 254 SSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL--------I 305

Query: 708 GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
              +SGN W C + +  L+ WL     K   ++   CAGPK ++G+
Sbjct: 306 SITLSGNMWECSRSICPLFYWL--KNFKGNKESTMICAGPKHIQGE 349


>ref|XP_540206.2| PREDICTED: similar to Leucine-rich repeat transmembrane neuronal
           protein 4 precursor isoform 1 [Canis familiaris].
          Length = 518

 Score =  105 bits (261), Expect = 8e-23
 Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 27/286 (9%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           ++ +  D  QGI  L+EL LS+N++  L  K   PVP L+ LDL+ N L+ L    FK  
Sbjct: 97  ISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFK-- 154

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
                                 GL+ L  L L  N L+T+P ++  +  +L  LDLG N+
Sbjct: 155 ----------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNR 192

Query: 429 LQTLPPDLLRGPLKLEWLHLE------------------------GNRLQVLEEGFLAPQ 536
           L++L  +   G LKL+ LHLE                         NR++ + +G     
Sbjct: 193 LRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTW 252

Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASLGKAAGNMKV 707
             L  L L+ N +  +  G F+ L  L  L+L +N LT++ +     W SL        +
Sbjct: 253 SSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL--------I 304

Query: 708 GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
              +SGN W C + +  L+ WL     K   ++   CAGPK ++G+
Sbjct: 305 SITLSGNMWECSRSICPLFYWL--KNFKGNKESTMICAGPKHIQGE 348


>ref|XP_547189.2| PREDICTED: similar to insulin-like growth factor binding protein,
           acid labile subunit [Canis familiaris].
          Length = 676

 Score =  104 bits (260), Expect = 1e-22
 Identities = 70/206 (33%), Positives = 106/206 (51%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           L  +P    QG+ +L+EL L+ N+L  L       + +L+ LDL+RNAL+ +   +F   
Sbjct: 253 LAVLPDAAFQGLASLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNALRSVKANVFVKL 312

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
             L  L L  N +  +      G+KALR LDLS N++  L          LH+L L +N 
Sbjct: 313 PKLQKLYLDHNVIAAVAPGAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLSHNA 372

Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
           +  L P   R    LE L L  NR++ L +       +L  L LN+N++  + AGAF GL
Sbjct: 373 IAGLRPRTFRDLHFLEELRLGHNRIRQLPDKAFEGLGQLEVLTLNDNQIREIEAGAFVGL 432

Query: 609 QVLDMLDLSNNSLTSVPEGLWASLGK 686
             + +++LS N L S+PE  +  LG+
Sbjct: 433 LSVAVMNLSGNCLRSLPERTFQGLGR 458



 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 72/217 (33%), Positives = 103/217 (47%)
 Frame = +3

Query: 30  PLGAQKENREFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRN 209
           P GA+    +  NL  +P    Q + +L  L+L  + L  L  + LL + QL+ L L RN
Sbjct: 144 PAGARALWLDGNNLFSIPEAAFQNLSSLGFLNLQGSGLASLEPRALLGLQQLRHLHLERN 203

Query: 210 ALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLAN 389
            L+ L    F  +  L +L L  N L  +D    RGL  L  L L  N L  LP      
Sbjct: 204 QLRGLGAHTFLHTPGLASLGLSNNMLGRVDEGLFRGLADLWDLHLGWNGLAVLPDAAFQG 263

Query: 390 FTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNN 569
              L  L L  N+L  L P L  G  +L  L L  N L+ ++       PKL+ L+L++N
Sbjct: 264 LASLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHN 323

Query: 570 KLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
            +  +A GAF G++ L  LDLS+N +  + E  +  L
Sbjct: 324 VIAAVAPGAFLGMKALRWLDLSHNRVAGLLEDTFPGL 360



 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 68/202 (33%), Positives = 102/202 (50%)
 Frame = +3

Query: 51  NREFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPP 230
           N +   L  +    L G+  L+ LHL  NQL  L A   L  P L  L L+ N L R+  
Sbjct: 175 NLQGSGLASLEPRALLGLQQLRHLHLERNQLRGLGAHTFLHTPGLASLGLSNNMLGRVDE 234

Query: 231 GLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHIL 410
           GLF+  A L  L L  N L +L  +  +GL +LR L L+GN+L  L   L     +L  L
Sbjct: 235 GLFRGLADLWDLHLGWNGLAVLPDAAFQGLASLRELVLAGNKLAYLQPPLFCGLGELREL 294

Query: 411 DLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAA 590
           DL  N L+++  ++     KL+ L+L+ N +  +  G       LR+L L++N++  L  
Sbjct: 295 DLSRNALRSVKANVFVKLPKLQKLYLDHNVIAAVAPGAFLGMKALRWLDLSHNRVAGLLE 354

Query: 591 GAFRGLQVLDMLDLSNNSLTSV 656
             F GL  L +L LS+N++  +
Sbjct: 355 DTFPGLLGLHVLRLSHNAIAGL 376



 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 83/285 (29%), Positives = 124/285 (43%), Gaps = 24/285 (8%)
 Frame = +3

Query: 69   LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
            + Q+P    +G+  L+ L L++NQ+ ++ A   + +  + V++L+ N L+ LP   F+  
Sbjct: 397  IRQLPDKAFEGLGQLEVLTLNDNQIREIEAGAFVGLLSVAVMNLSGNCLRSLPERTFQGL 456

Query: 249  AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
              LH+L L+   L  +      GL  LR L L  N +  +  + L    +L  LDL  N+
Sbjct: 457  GRLHSLHLERGCLGRVRPHAFAGLSGLRRLFLKHNGITAVDEQGLWGLAELLELDLTANR 516

Query: 429  LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
            L  LP    +G  KLE+L L GN+L  L    L P  +L +L +++N+L  L  G    L
Sbjct: 517  LTHLPARAFQGLGKLEYLLLSGNQLAALAADSLRPLRRLFWLDVSHNRLEALPDGELAEL 576

Query: 609  QVLDMLDLSNNSL------TSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRW 770
              L  L L+NNSL       +  E LW               +  NPW C   L  L R 
Sbjct: 577  GQLRYLSLTNNSLRIFTPPATGLERLW---------------LGDNPWDCGCALGAL-RA 620

Query: 771  LVANE------------------DKMFFQNNTHCAGPKALEGQTL 851
            L   E                    ++  NN  CAGP  + G  L
Sbjct: 621  LALREPGVVPRLVQAAPEGDDGQPPIYVSNNITCAGPPGVSGLDL 665



 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 70/222 (31%), Positives = 103/222 (46%), Gaps = 4/222 (1%)
 Frame = +3

Query: 18  RPP--CPLGAQKENREFFN-LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLK 188
           +PP  C LG  +E     N L  + A++   +P LQ+L+L +N +  ++    L +  L+
Sbjct: 281 QPPLFCGLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNVIAAVAPGAFLGMKALR 340

Query: 189 VLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTL 368
            LDL+ N +  L    F     LH L L  N +  L     R L  L  L L  N++R L
Sbjct: 341 WLDLSHNRVAGLLEDTFPGLLGLHVLRLSHNAIAGLRPRTFRDLHFLEELRLGHNRIRQL 400

Query: 369 PRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLR 548
           P K       L +L L +NQ++ +      G L +  ++L GN L+ L E       +L 
Sbjct: 401 PDKAFEGLGQLEVLTLNDNQIREIEAGAFVGLLSVAVMNLSGNCLRSLPERTFQGLGRLH 460

Query: 549 YLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE-GLW 671
            L L    L  +   AF GL  L  L L +N +T+V E GLW
Sbjct: 461 SLHLERGCLGRVRPHAFAGLSGLRRLFLKHNGITAVDEQGLW 502



 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 63/167 (37%), Positives = 78/167 (46%)
 Frame = +3

Query: 186 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 365
           + L L  N L  +P   F+  ++L  L L+ + L  L+   L GL+ LRHL L  NQLR 
Sbjct: 148 RALWLDGNNLFSIPEAAFQNLSSLGFLNLQGSGLASLEPRALLGLQQLRHLHLERNQLRG 207

Query: 366 LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKL 545
           L      +   L  L L NN L  +   L RG   L  LHL  N L VL +        L
Sbjct: 208 LGAHTFLHTPGLASLGLSNNMLGRVDEGLFRGLADLWDLHLGWNGLAVLPDAAFQGLASL 267

Query: 546 RYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 686
           R L L  NKL  L    F GL  L  LDLS N+L SV   ++  L K
Sbjct: 268 RELVLAGNKLAYLQPPLFCGLGELRELDLSRNALRSVKANVFVKLPK 314


>ref|XP_852404.1| PREDICTED: similar to Chondroadherin precursor (Cartilage
           leucine-rich protein) [Canis familiaris].
          Length = 355

 Score =  102 bits (254), Expect = 5e-22
 Identities = 83/297 (27%), Positives = 124/297 (41%), Gaps = 46/297 (15%)
 Frame = +3

Query: 93  LQGIPNLQE----LHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 260
           LQ IP + E    L+L  N    L+A     +P L  L L    ++ +  G F+    L 
Sbjct: 39  LQKIPKVSEKTKLLNLQRNNFPVLAANSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLI 98

Query: 261 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 440
            L L  N + +L A     L  L +L L  N++  LPR LL+   +L IL L NN+++ L
Sbjct: 99  YLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIREL 158

Query: 441 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 620
                +G   L WL+L  N L  L+ G L     L   +L+ N+L++  A A   L+V++
Sbjct: 159 RAGAFQGAKDLRWLYLSENALTSLQPGALDDVENLAKFYLDRNQLSSYPAAALSKLRVVE 218

Query: 621 MLDLSNNSLTSVPEGLWASLGKAAGNM--------------------------------- 701
            L LS+N L S+P+  + S G+    +                                 
Sbjct: 219 ELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLNQ 278

Query: 702 ---KVGFD------ISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
                 FD      ++ NPW C  +L  L RWL A   +     +  CA P   +GQ
Sbjct: 279 LPSNFPFDSLETLTLTNNPWKCTCQLRGLRRWLEAKTSR----PDATCASPAKFKGQ 331


>ref|XP_542026.2| PREDICTED: similar to Fibromodulin precursor (FM) (Collagen-binding
           59 kDa protein) (Keratan sulfate proteoglycan
           fibromodulin) (KSPG fibromodulin) [Canis familiaris].
          Length = 593

 Score =  100 bits (250), Expect = 1e-21
 Identities = 79/199 (39%), Positives = 111/199 (55%), Gaps = 7/199 (3%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLED--LSAKFLLPVPQLKVLDLTRNALKRLPPGLF 239
           ++T + A  L G+  L EL+L+ N+L    +  +   P+  L+ LDL  N L RLP GL 
Sbjct: 381 HVTTLGARDLAGLRGLAELNLAYNRLVSARVHRRAFRPLRALRSLDLAGNQLTRLPGGL- 439

Query: 240 KVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT--LPRKLLANFTDLHILD 413
               +L TL L+ N+L  L+   L GL  LR L L+ N+LR   +          L +LD
Sbjct: 440 --PGSLRTLRLQRNQLRALEPELLAGLDQLRELSLAHNRLRIGDIGPGTWHELQALQVLD 497

Query: 414 LGNNQLQTLPPDLLRGPLKLEWLHLEGNRL-QVLEEGFLAPQPKLRYLFLNNNKL--TTL 584
           L +N+L  +PPDL   P  LE LHL+GNR+  V  E FL+  P+LR LFL  N+L  T++
Sbjct: 498 LSHNELSFVPPDL---PEALEELHLQGNRIGHVGSEAFLS-TPRLRALFLRANRLHMTSI 553

Query: 585 AAGAFRGLQVLDMLDLSNN 641
           A  AF GL  L ++D + N
Sbjct: 554 APEAFLGLLHLRVVDTAGN 572



 Score = 94.0 bits (232), Expect = 2e-19
 Identities = 81/226 (35%), Positives = 112/226 (49%), Gaps = 6/226 (2%)
 Frame = +3

Query: 21  PPCPLGAQKENREFFNLTQMPADILQGIPNLQELHLSNNQLED--LSAKFLLPVPQLKVL 194
           P  P   ++ + +   ++++P   L    +L+EL+L +NQL D  L A     +  L+ L
Sbjct: 224 PSLPPSLERLHLQNNLISKVPRGALSRQTHLRELYLQHNQLTDSGLDATTFSKLRHLEYL 283

Query: 195 DLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT--L 368
           DL+ N L  +P GL +  A LH   L  NR+  ++A+ LRG + LR+L L  NQL    L
Sbjct: 284 DLSHNQLASVPAGLPRTLAVLH---LGRNRIRWVEAARLRGARGLRYLLLQHNQLGAEGL 340

Query: 369 PRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLR 548
           P   L     LH L L  N L  +PP L   P +L  L L  N +  L    LA    L 
Sbjct: 341 PAGALRPLRGLHTLHLYGNGLHRVPPAL---PRRLRALVLPHNHVTTLGARDLAGLRGLA 397

Query: 549 YLFLNNNKLTTLAAG--AFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
            L L  N+L +      AFR L+ L  LDL+ N LT +P GL  SL
Sbjct: 398 ELNLAYNRLVSARVHRRAFRPLRALRSLDLAGNQLTRLPGGLPGSL 443



 Score = 83.2 bits (204), Expect = 3e-16
 Identities = 71/212 (33%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
 Frame = +3

Query: 114 QELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKR--LPPGLFKVSAALHTLVLKENRL 287
           Q L L NNQL++L    L  +  L+ L+L  N +    LP   F+    L  + +  N+L
Sbjct: 89  QHLSLQNNQLQELPYNELSRLRSLRTLNLHNNLISSEGLPDEAFESLTQLQHIYVAHNKL 148

Query: 288 DILDASWLRGLK---------------------ALRHLDLSGNQLRT--LPRKLLANFTD 398
            +      R L+                     ALR + L  NQL    LP         
Sbjct: 149 SVAPQFLPRSLRVADLAANQVTEIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFHGSEA 208

Query: 399 LHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLT 578
           +  L L +N+L  LPP L   P  LE LHL+ N +  +  G L+ Q  LR L+L +N+LT
Sbjct: 209 VATLSLSSNRLSYLPPSL---PPSLERLHLQNNLISKVPRGALSRQTHLRELYLQHNQLT 265

Query: 579 T--LAAGAFRGLQVLDMLDLSNNSLTSVPEGL 668
              L A  F  L+ L+ LDLS+N L SVP GL
Sbjct: 266 DSGLDATTFSKLRHLEYLDLSHNQLASVPAGL 297



 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
 Frame = +3

Query: 321 KALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT--LPPDLLRGPLKLEWLHLEG 494
           +A +HL L  NQL+ LP   L+    L  L+L NN + +  LP +      +L+ +++  
Sbjct: 86  RAAQHLSLQNNQLQELPYNELSRLRSLRTLNLHNNLISSEGLPDEAFESLTQLQHIYVAH 145

Query: 495 NRLQVLEEGF---------------------LAPQPKLRYLFLNNNKLTT--LAAGAFRG 605
           N+L V  +                          +P LR ++L+NN+L+   L   AF G
Sbjct: 146 NKLSVAPQFLPRSLRVADLAANQVTEIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFHG 205

Query: 606 LQVLDMLDLSNNSLTSVPEGLWASL 680
            + +  L LS+N L+ +P  L  SL
Sbjct: 206 SEAVATLSLSSNRLSYLPPSLPPSL 230


>ref|XP_546127.2| PREDICTED: similar to Leucine-rich repeat transmembrane neuronal
           protein 3 precursor isoform 1 [Canis familiaris].
          Length = 581

 Score =  100 bits (248), Expect = 2e-21
 Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 28/291 (9%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
           +L ++  +  +G+  L  L+L +N + ++       + +LK L L+ N +       F+ 
Sbjct: 72  SLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRP 131

Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
              L  L L  N+L  L +   RGL+ L  L L  N LRT+P ++  +  +L +LDLG N
Sbjct: 132 VTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYN 191

Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA---AGA 596
           ++++L  ++  G ++L+ LHLE N+   L          L+ L+L  NK++ +    +  
Sbjct: 192 RIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKISVIGQTMSWT 251

Query: 597 FRGLQVLDM----------------------LDLSNNSLTSVPEGL---WASLGKAAGNM 701
           +  LQ LD+                      L+L +N LT + + +   W SL       
Sbjct: 252 WSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLN------ 305

Query: 702 KVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLL 854
                ++GN W C + +  L  WL     K   +N   CA PK L+G  ++
Sbjct: 306 --DISLAGNIWECSRNICSLVNWL--KSFKGLRENTIICASPKELQGVNVM 352



 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 50/163 (30%), Positives = 74/163 (45%)
 Frame = +3

Query: 192 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 371
           L L  N+L++L    FK    L  L L  N +  +D +   G++ L+ L LS N++    
Sbjct: 66  LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125

Query: 372 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 551
                  T+L  LDL  NQL +L  +  RG  KL  LHL  N L+ +          L  
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLEL 185

Query: 552 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
           L L  N++ +LA   F G+  L  L L +N  + +   L+  L
Sbjct: 186 LDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRL 228


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 39,905,838
Number of extensions: 1280214
Number of successful extensions: 9686
Number of sequences better than 1.0e-05: 158
Number of HSP's gapped: 8428
Number of HSP's successfully gapped: 467
Length of query: 300
Length of database: 18,874,504
Length adjustment: 102
Effective length of query: 198
Effective length of database: 15,474,232
Effective search space: 3063897936
Effective search space used: 3063897936
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001978
         (900 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_443204.1| leucine-rich alpha-2-glycoprotein precursor [Ho...   395   e-110
Alignment   gi|NP_001073982.2| carboxypeptidase N subunit 2 [Homo sapiens].      124   1e-28
Alignment   gi|NP_570843.2| leucine-rich repeat-containing protein 15 isofo...   121   1e-27
Alignment   gi|NP_001128529.2| leucine-rich repeat-containing protein 15 is...   121   1e-27
Alignment   gi|NP_612490.1| chondroadherin-like protein precursor [Homo sap...   117   2e-26
Alignment   gi|NP_000164.5| platelet glycoprotein Ib alpha chain precursor ...   114   2e-25
Alignment   gi|NP_079269.4| leucine-rich repeat transmembrane neuronal prot...   105   7e-23
Alignment   gi|NP_001128217.1| leucine-rich repeat transmembrane neuronal p...   105   7e-23
Alignment   gi|NP_001139478.1| insulin-like growth factor-binding protein c...   103   2e-22
Alignment   gi|NP_004961.1| insulin-like growth factor-binding protein comp...   103   2e-22

>ref|NP_443204.1| leucine-rich alpha-2-glycoprotein precursor [Homo sapiens].
          Length = 347

 Score =  395 bits (1015), Expect = e-110
 Identities = 199/271 (73%), Positives = 226/271 (83%)
 Frame = +3

Query: 57  EFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 236
           EFFNLT +PA++LQG   LQELHLS+N LE LS +FL PVPQL+VLDLTRNAL  LPPGL
Sbjct: 76  EFFNLTHLPANLLQGASKLQELHLSSNGLESLSPEFLRPVPQLRVLDLTRNALTGLPPGL 135

Query: 237 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 416
           F+ SA L TLVLKEN+L++L+ SWL GLKAL HLDLSGN+LR LP  LLANFT L  LDL
Sbjct: 136 FQASATLDTLVLKENQLEVLEVSWLHGLKALGHLDLSGNRLRKLPPGLLANFTLLRTLDL 195

Query: 417 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 596
           G NQL+TLPPDLLRGPL+LE LHLEGN+LQVL +  L PQP LRYLFLN NKL  +AAGA
Sbjct: 196 GENQLETLPPDLLRGPLQLERLHLEGNKLQVLGKDLLLPQPDLRYLFLNGNKLARVAAGA 255

Query: 597 FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLV 776
           F+GL+ LDMLDLSNNSL SVPEGLWASLG+   +M+ GFDISGNPWICDQ L DLYRWL 
Sbjct: 256 FQGLRQLDMLDLSNNSLASVPEGLWASLGQPNWDMRDGFDISGNPWICDQNLSDLYRWLQ 315

Query: 777 ANEDKMFFQNNTHCAGPKALEGQTLLAVAAS 869
           A +DKMF QN+T CAGP+A++GQTLLAVA S
Sbjct: 316 AQKDKMFSQNDTRCAGPEAVKGQTLLAVAKS 346



 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 42/115 (36%), Positives = 53/115 (46%)
 Frame = +3

Query: 333 HLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVL 512
           HL +    L  LP  LL   + L  L L +N L++L P+ LR   +L  L L  N L  L
Sbjct: 72  HLAVEFFNLTHLPANLLQGASKLQELHLSSNGLESLSPEFLRPVPQLRVLDLTRNALTGL 131

Query: 513 EEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWAS 677
             G       L  L L  N+L  L      GL+ L  LDLS N L  +P GL A+
Sbjct: 132 PPGLFQASATLDTLVLKENQLEVLEVSWLHGLKALGHLDLSGNRLRKLPPGLLAN 186


>ref|NP_001073982.2| carboxypeptidase N subunit 2 [Homo sapiens].
          Length = 545

 Score =  124 bits (311), Expect = 1e-28
 Identities = 91/283 (32%), Positives = 132/283 (46%), Gaps = 19/283 (6%)
 Frame = +3

Query: 69   LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
            L  +P  + Q + +L+ L+L+ N L  L  +   P+  L+ L L+ NAL  LP G+F   
Sbjct: 157  LQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKL 216

Query: 249  AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
             +L  L L  N +  L       L  L  L L  N +  LP  + A+  +L  L L  N 
Sbjct: 217  GSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNM 276

Query: 429  LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
            L+ LP  L      L  L L  N+L+ + EG  A    LR L L+ N +T L AG FR L
Sbjct: 277  LRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDL 336

Query: 609  QVLDMLDLSNNSLTSVPEGLWASLGK--------------AAGNMKVGFD-----ISGNP 731
            + L  L L +N+LT++   L+ +L K                G     ++     + GNP
Sbjct: 337  EELVKLYLGSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALHGNP 396

Query: 732  WICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLLAV 860
            W CD  L  L+ WL    D++     T+CAGP  L+GQ + A+
Sbjct: 397  WQCDCHLAYLFNWLQQYTDRL-LNIQTYCAGPAYLKGQVVPAL 438



 Score = 99.8 bits (247), Expect = 3e-21
 Identities = 76/249 (30%), Positives = 109/249 (43%), Gaps = 25/249 (10%)
 Frame = +3

Query: 12  RERPPCPLGAQKENREFF----NLTQMPADI---------------------LQGIPNLQ 116
           R   PCP+G     +E F     L  +P DI                         PNL 
Sbjct: 17  RPAQPCPMGCDCFVQEVFCSDEELATVPLDIPPYTKNIIFVETSFTTLETRAFGSNPNLT 76

Query: 117 ELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDIL 296
           ++   N QL          +P+L+ L++T ++   L   +F    +L  L L  N L+ L
Sbjct: 77  KVVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEAL 136

Query: 297 DASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLE 476
                + L AL  L L GNQL+ LPR+L    T L  L+L  N L  LP +L      L+
Sbjct: 137 PEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQ 196

Query: 477 WLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSV 656
            L L  N L  L +G       L+ LFL++N ++ L    F  L  L+ L L  N++T +
Sbjct: 197 TLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHL 256

Query: 657 PEGLWASLG 683
           P  ++ASLG
Sbjct: 257 PLSIFASLG 265


>ref|NP_570843.2| leucine-rich repeat-containing protein 15 isoform b [Homo sapiens].
          Length = 581

 Score =  121 bits (303), Expect = 1e-27
 Identities = 84/271 (30%), Positives = 122/271 (45%)
 Frame = +3

Query: 48  ENREFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLP 227
           ENR    LT +P     G+ NLQEL L  NQ+  LS         L+ L L+ N + +LP
Sbjct: 206 ENR----LTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLP 261

Query: 228 PGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHI 407
           P +F     L+ L L  N L  L       +  LR L L  N + +LP  + +N   L +
Sbjct: 262 PSVFMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQV 321

Query: 408 LDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA 587
           L L  NQ+  + P    G  +L  L L  N LQ L+         L+ + L NN+L  L 
Sbjct: 322 LILSRNQISFISPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLP 381

Query: 588 AGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYR 767
              F  +  L  + L NN L ++P G++  LGK          +  NPW CD  +  L  
Sbjct: 382 GNIFANVNGLMAIQLQNNQLENLPLGIFDHLGKLC-----ELRLYDNPWRCDSDILPLRN 436

Query: 768 WLVANEDKMFFQNNTHCAGPKALEGQTLLAV 860
           WL+ N+ ++       C  P  + GQ+L+ +
Sbjct: 437 WLLLNQPRLGTDTVPVCFSPANVRGQSLIII 467



 Score = 92.8 bits (229), Expect = 4e-19
 Identities = 65/191 (34%), Positives = 93/191 (48%)
 Frame = +3

Query: 108 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 287
           NL+EL L  N LE +       +  L  L+L +N+L  + P +F+    L  L L ENRL
Sbjct: 150 NLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRL 209

Query: 288 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 467
             +      GL  L+ L L  NQ+  L   L  N  +L  L L NN +  LPP +     
Sbjct: 210 TDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLP 269

Query: 468 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 647
           +L  L L GN L+ L  G   P P LR L+L +N +++L    F  L+ L +L LS N +
Sbjct: 270 QLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQI 329

Query: 648 TSVPEGLWASL 680
           + +  G +  L
Sbjct: 330 SFISPGAFNGL 340



 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 2/221 (0%)
 Frame = +3

Query: 24  PCPLGAQKENREFFN--LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLD 197
           P PL     + +  N  +T++       I  L  L +  N+L  ++      +  L+ L 
Sbjct: 48  PTPLPWNAMSLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLS 107

Query: 198 LTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRK 377
           L  N L+ LP GLF+   +L +L+L  N+L  +  +       L+ L L GN L  +P  
Sbjct: 108 LANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDG 167

Query: 378 LLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLF 557
              +   L  L+LG N L  + P + +    L+ L L  NRL  +  G       L+ L 
Sbjct: 168 AFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELA 227

Query: 558 LNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
           L  N++  L+ G F     L  L LSNN ++ +P  ++  L
Sbjct: 228 LQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQL 268



 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 54/204 (26%), Positives = 97/204 (47%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           L+++     + + +L+ L L+NN+L+ L       +  L+ L L+ N L ++ P  F   
Sbjct: 89  LSRITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQC 148

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
           + L  L L  N L+ +       L  L  L+L  N L  +  ++  +  +L +L L  N+
Sbjct: 149 SNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENR 208

Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
           L  +P     G + L+ L L+ N++ +L  G       L+ L+L+NN ++ L    F  L
Sbjct: 209 LTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQL 268

Query: 609 QVLDMLDLSNNSLTSVPEGLWASL 680
             L+ L L  NSL  +  G++  +
Sbjct: 269 PQLNRLTLFGNSLKELSPGIFGPM 292



 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 44/141 (31%), Positives = 65/141 (46%)
 Frame = +3

Query: 261 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 440
           +L +    +  L+ S    + AL  L +  N+L  +      N   L  L L NN+LQ L
Sbjct: 57  SLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVL 116

Query: 441 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 620
           P  L +G   LE L L  N+L  ++    +    L+ L L+ N L  +  GAF  L  L 
Sbjct: 117 PIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLT 176

Query: 621 MLDLSNNSLTSVPEGLWASLG 683
            L+L  NSLT +   ++  LG
Sbjct: 177 KLNLGKNSLTHISPRVFQHLG 197


>ref|NP_001128529.2| leucine-rich repeat-containing protein 15 isoform a [Homo sapiens].
          Length = 587

 Score =  121 bits (303), Expect = 1e-27
 Identities = 84/271 (30%), Positives = 122/271 (45%)
 Frame = +3

Query: 48  ENREFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLP 227
           ENR    LT +P     G+ NLQEL L  NQ+  LS         L+ L L+ N + +LP
Sbjct: 212 ENR----LTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLP 267

Query: 228 PGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHI 407
           P +F     L+ L L  N L  L       +  LR L L  N + +LP  + +N   L +
Sbjct: 268 PSVFMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQV 327

Query: 408 LDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA 587
           L L  NQ+  + P    G  +L  L L  N LQ L+         L+ + L NN+L  L 
Sbjct: 328 LILSRNQISFISPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLP 387

Query: 588 AGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYR 767
              F  +  L  + L NN L ++P G++  LGK          +  NPW CD  +  L  
Sbjct: 388 GNIFANVNGLMAIQLQNNQLENLPLGIFDHLGKLC-----ELRLYDNPWRCDSDILPLRN 442

Query: 768 WLVANEDKMFFQNNTHCAGPKALEGQTLLAV 860
           WL+ N+ ++       C  P  + GQ+L+ +
Sbjct: 443 WLLLNQPRLGTDTVPVCFSPANVRGQSLIII 473



 Score = 92.8 bits (229), Expect = 4e-19
 Identities = 65/191 (34%), Positives = 93/191 (48%)
 Frame = +3

Query: 108 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 287
           NL+EL L  N LE +       +  L  L+L +N+L  + P +F+    L  L L ENRL
Sbjct: 156 NLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRL 215

Query: 288 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 467
             +      GL  L+ L L  NQ+  L   L  N  +L  L L NN +  LPP +     
Sbjct: 216 TDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLP 275

Query: 468 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 647
           +L  L L GN L+ L  G   P P LR L+L +N +++L    F  L+ L +L LS N +
Sbjct: 276 QLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQI 335

Query: 648 TSVPEGLWASL 680
           + +  G +  L
Sbjct: 336 SFISPGAFNGL 346



 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 2/221 (0%)
 Frame = +3

Query: 24  PCPLGAQKENREFFN--LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLD 197
           P PL     + +  N  +T++       I  L  L +  N+L  ++      +  L+ L 
Sbjct: 54  PTPLPWNAMSLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLS 113

Query: 198 LTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRK 377
           L  N L+ LP GLF+   +L +L+L  N+L  +  +       L+ L L GN L  +P  
Sbjct: 114 LANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDG 173

Query: 378 LLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLF 557
              +   L  L+LG N L  + P + +    L+ L L  NRL  +  G       L+ L 
Sbjct: 174 AFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELA 233

Query: 558 LNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
           L  N++  L+ G F     L  L LSNN ++ +P  ++  L
Sbjct: 234 LQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQL 274



 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 54/204 (26%), Positives = 97/204 (47%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           L+++     + + +L+ L L+NN+L+ L       +  L+ L L+ N L ++ P  F   
Sbjct: 95  LSRITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQC 154

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
           + L  L L  N L+ +       L  L  L+L  N L  +  ++  +  +L +L L  N+
Sbjct: 155 SNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENR 214

Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
           L  +P     G + L+ L L+ N++ +L  G       L+ L+L+NN ++ L    F  L
Sbjct: 215 LTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQL 274

Query: 609 QVLDMLDLSNNSLTSVPEGLWASL 680
             L+ L L  NSL  +  G++  +
Sbjct: 275 PQLNRLTLFGNSLKELSPGIFGPM 298



 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 44/141 (31%), Positives = 65/141 (46%)
 Frame = +3

Query: 261 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 440
           +L +    +  L+ S    + AL  L +  N+L  +      N   L  L L NN+LQ L
Sbjct: 63  SLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVL 122

Query: 441 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 620
           P  L +G   LE L L  N+L  ++    +    L+ L L+ N L  +  GAF  L  L 
Sbjct: 123 PIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLT 182

Query: 621 MLDLSNNSLTSVPEGLWASLG 683
            L+L  NSLT +   ++  LG
Sbjct: 183 KLNLGKNSLTHISPRVFQHLG 203


>ref|NP_612490.1| chondroadherin-like protein precursor [Homo sapiens].
          Length = 762

 Score =  117 bits (292), Expect = 2e-26
 Identities = 93/271 (34%), Positives = 134/271 (49%), Gaps = 2/271 (0%)
 Frame = +3

Query: 69   LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
            + ++ A  L G+  L  L+LS+NQL  LSA  L   P+L  L L RN   ++P    +  
Sbjct: 461  IAELEAGALAGLGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLERNRFLQVPGAALRAL 520

Query: 249  AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
             +L +L L++N +D L    L   +ALR + LSGN++  +    L    +L  L L  NQ
Sbjct: 521  PSLFSLHLQDNAVDRLAPGDLGRTRALRWVYLSGNRITEVSLGALGPARELEKLHLDRNQ 580

Query: 429  LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPK-LRYLFLNNNKLTTLAAGAFRG 605
            L+ +P   L G   L  L L GN L+ L +G   P  + L++LFLN++ L  +  GAF G
Sbjct: 581  LREVPTGALEGLPALLELQLSGNPLRALRDGAFQPVGRSLQHLFLNSSGLEQICPGAFSG 640

Query: 606  L-QVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVAN 782
            L   L  L L  N L ++P     SL +         D+S NP+ CD +L  L+RWL   
Sbjct: 641  LGPGLQSLHLQKNQLRALP--ALPSLSQLE-----LIDLSSNPFHCDCQLLPLHRWLTG- 692

Query: 783  EDKMFFQNNTHCAGPKALEGQTLLAVAASLE 875
               +  +    CA P    GQ + A AA  E
Sbjct: 693  ---LNLRVGATCATPPNARGQRVKAAAAVFE 720



 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 84/255 (32%), Positives = 116/255 (45%)
 Frame = +3

Query: 96  QGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 275
           +G+  L  L+L++N L +L  + L  +  L+ L+L  NAL+ L PG F    AL TL L 
Sbjct: 107 RGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLA 166

Query: 276 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 455
            N L  L A   +GL  +R L LS N L  L  + LA    L  L L +N+LQ LP  +L
Sbjct: 167 HNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGPVL 226

Query: 456 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 635
                L  L L  N L    E      P LR L L+   L  L   AF     L  LDL 
Sbjct: 227 SQARGLARLELGHNPLTYAGEEDGLALPGLRELLLDGGALQALGPRAFAHCPRLHTLDLR 286

Query: 636 NNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTH 815
            N L ++P        +  G ++    + GNP  C  +   L  WL     +   +++  
Sbjct: 287 GNQLDTLPP------LQGPGQLR-RLRLQGNPLWCGCQARPLLEWLA----RARVRSDGA 335

Query: 816 CAGPKALEGQTLLAV 860
           C GP+ L G+ L A+
Sbjct: 336 CQGPRRLRGEALDAL 350



 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
 Frame = +3

Query: 174 VPQL-KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSG 350
           +P+L + LDL  N LK +P   F+    L  L L+   ++++     RGL  L  L+L+ 
Sbjct: 60  IPELTQRLDLQGNLLKVIPAAAFQGVPHLTHLDLRHCEVELVAEGAFRGLGRLLLLNLAS 119

Query: 351 NQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLA 530
           N LR LP++ L     L  L+L  N L+ L P        L  L+L  N L  L      
Sbjct: 120 NHLRELPQEALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLAHNALVYLPAMAFQ 179

Query: 531 PQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVP 659
              ++R+L L++N L+ LA  A  GL  L  L L +N L ++P
Sbjct: 180 GLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALP 222


>ref|NP_000164.5| platelet glycoprotein Ib alpha chain precursor [Homo sapiens].
          Length = 652

 Score =  114 bits (284), Expect = 2e-25
 Identities = 86/244 (35%), Positives = 122/244 (50%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
           NLT +P D+ +   +   LHLS N L   S   L+P  +L  L+L R  L +L       
Sbjct: 37  NLTALPPDLPK---DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQ------ 87

Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
                           +D +    L  L  LDLS NQL++LP  L      L +LD+  N
Sbjct: 88  ----------------VDGT----LPVLGTLDLSHNQLQSLPL-LGQTLPALTVLDVSFN 126

Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
           +L +LP   LRG  +L+ L+L+GN L+ L  G L P PKL  L L NN LT L AG   G
Sbjct: 127 RLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNG 186

Query: 606 LQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANE 785
           L+ LD L L  NSL ++P+G + S      ++     + GNPW+C+ ++    RWL  N 
Sbjct: 187 LENLDTLLLQENSLYTIPKGFFGS------HLLPFAFLHGNPWLCNCEILYFRRWLQDNA 240

Query: 786 DKMF 797
           + ++
Sbjct: 241 ENVY 244



 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 33/76 (43%), Positives = 43/76 (56%)
 Frame = +3

Query: 60  FFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLF 239
           F  LT +P   L+G+  LQEL+L  N+L+ L    L P P+L+ L L  N L  LP GL 
Sbjct: 125 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLL 184

Query: 240 KVSAALHTLVLKENRL 287
                L TL+L+EN L
Sbjct: 185 NGLENLDTLLLQENSL 200


>ref|NP_079269.4| leucine-rich repeat transmembrane neuronal protein 4 isoform b
           [Homo sapiens].
          Length = 518

 Score =  105 bits (261), Expect = 7e-23
 Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 27/286 (9%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           ++ +  D  QGI  L+EL LS+N++  L  K   PVP L+ LDL+ N L+ L    FK  
Sbjct: 97  ISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFK-- 154

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
                                 GL+ L  L L  N L+T+P ++  +  +L  LDLG N+
Sbjct: 155 ----------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNR 192

Query: 429 LQTLPPDLLRGPLKLEWLHLE------------------------GNRLQVLEEGFLAPQ 536
           L++L  +   G LKL+ LHLE                         NR++ + +G     
Sbjct: 193 LRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTW 252

Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASLGKAAGNMKV 707
             L  L L+ N +  +  G F+ L  L  L+L +N LT++ +     W SL        +
Sbjct: 253 SSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL--------I 304

Query: 708 GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
              +SGN W C + +  L+ WL     K   ++   CAGPK ++G+
Sbjct: 305 SITLSGNMWECSRSICPLFYWL--KNFKGNKESTMICAGPKHIQGE 348


>ref|NP_001128217.1| leucine-rich repeat transmembrane neuronal protein 4 isoform a
           [Homo sapiens].
          Length = 590

 Score =  105 bits (261), Expect = 7e-23
 Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 27/286 (9%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           ++ +  D  QGI  L+EL LS+N++  L  K   PVP L+ LDL+ N L+ L    FK  
Sbjct: 97  ISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFK-- 154

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
                                 GL+ L  L L  N L+T+P ++  +  +L  LDLG N+
Sbjct: 155 ----------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNR 192

Query: 429 LQTLPPDLLRGPLKLEWLHLE------------------------GNRLQVLEEGFLAPQ 536
           L++L  +   G LKL+ LHLE                         NR++ + +G     
Sbjct: 193 LRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTW 252

Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASLGKAAGNMKV 707
             L  L L+ N +  +  G F+ L  L  L+L +N LT++ +     W SL        +
Sbjct: 253 SSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL--------I 304

Query: 708 GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
              +SGN W C + +  L+ WL     K   ++   CAGPK ++G+
Sbjct: 305 SITLSGNMWECSRSICPLFYWL--KNFKGNKESTMICAGPKHIQGE 348


>ref|NP_001139478.1| insulin-like growth factor-binding protein complex acid labile
           subunit isoform 1 precursor [Homo sapiens].
          Length = 643

 Score =  103 bits (258), Expect = 2e-22
 Identities = 71/205 (34%), Positives = 100/205 (48%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
           NL+ +P    Q + +L  L+L   QL  L  + LL +  L  L L RN L+ L  G F  
Sbjct: 123 NLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAH 182

Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
           + AL +L L  NRL  L+     GL +L  L+L  N L  LP         L  L L  N
Sbjct: 183 TPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGN 242

Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
           +L  L P L  G  +L  L L  N L+ ++       P+L+ L+L+ N +  +A GAF G
Sbjct: 243 RLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLG 302

Query: 606 LQVLDMLDLSNNSLTSVPEGLWASL 680
           L+ L  LDLS+N +  + E  +  L
Sbjct: 303 LKALRWLDLSHNRVAGLLEDTFPGL 327



 Score =  102 bits (254), Expect = 5e-22
 Identities = 69/207 (33%), Positives = 108/207 (52%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
           +L  +P    +G+ +L+EL L+ N+L  L       + +L+ LDL+RNAL+ +   +F  
Sbjct: 219 SLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQ 278

Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
              L  L L  N +  +      GLKALR LDLS N++  L          L +L L +N
Sbjct: 279 LPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHN 338

Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
            + +L P   +    LE L L  NR++ L E       +L  L L++N+L  + AGAF G
Sbjct: 339 AIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLG 398

Query: 606 LQVLDMLDLSNNSLTSVPEGLWASLGK 686
           L  + +++LS N L ++PE ++  LGK
Sbjct: 399 LTNVAVMNLSGNCLRNLPEQVFRGLGK 425



 Score = 99.0 bits (245), Expect = 5e-21
 Identities = 85/284 (29%), Positives = 124/284 (43%), Gaps = 23/284 (8%)
 Frame = +3

Query: 69   LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
            + Q+     +G+  L+ L L +NQL+++ A   L +  + V++L+ N L+ LP  +F+  
Sbjct: 364  IRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGL 423

Query: 249  AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
              LH+L L+ + L  +      GL  LR L L  N L  +  + L    +L  LDL +NQ
Sbjct: 424  GKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQ 483

Query: 429  LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
            L  LP  L +G  KLE+L L  NRL  L    L P  +  +L +++N+L  L       L
Sbjct: 484  LTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPL 543

Query: 609  QVLDMLDLSNNSL---TSVPEG---LWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRW 770
              L  L L NNSL   T  P G   LW               + GNPW C   L  L  +
Sbjct: 544  GRLRYLSLRNNSLRTFTPQPPGLERLW---------------LEGNPWDCGCPLKALRDF 588

Query: 771  LVAN-----------------EDKMFFQNNTHCAGPKALEGQTL 851
             + N                 +   +  NN  CA P  + G  L
Sbjct: 589  ALQNPSAVPRFVQAICEGDDCQPPAYTYNNITCASPPEVVGLDL 632



 Score = 98.6 bits (244), Expect = 7e-21
 Identities = 67/196 (34%), Positives = 100/196 (51%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           L  +    L G+ NL  LHL  NQL  L+       P L  L L+ N L RL  GLF+  
Sbjct: 148 LGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGL 207

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
            +L  L L  N L +L  +  RGL +LR L L+GN+L  L   L +   +L  LDL  N 
Sbjct: 208 GSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNA 267

Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
           L+ +  ++     +L+ L+L+ N +  +  G       LR+L L++N++  L    F GL
Sbjct: 268 LRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGL 327

Query: 609 QVLDMLDLSNNSLTSV 656
             L +L LS+N++ S+
Sbjct: 328 LGLRVLRLSHNAIASL 343



 Score = 91.7 bits (226), Expect = 8e-19
 Identities = 68/196 (34%), Positives = 96/196 (48%)
 Frame = +3

Query: 99  GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 278
           G+  L+ L LS+N++  L       +  L+VL L+ NA+  L P  FK    L  L L  
Sbjct: 302 GLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGH 361

Query: 279 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 458
           NR+  L      GL  L  L L  NQL+ +        T++ +++L  N L+ LP  + R
Sbjct: 362 NRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFR 421

Query: 459 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 638
           G  KL  LHLEG+ L  +          LR LFL +N L  +   +  GL  L  LDL++
Sbjct: 422 GLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTS 481

Query: 639 NSLTSVPEGLWASLGK 686
           N LT +P  L+  LGK
Sbjct: 482 NQLTHLPHRLFQGLGK 497



 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 59/165 (35%), Positives = 79/165 (47%)
 Frame = +3

Query: 186 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 365
           + L L  N L  +PP  F+  ++L  L L+  +L  L+   L GL+ L HL L  NQLR+
Sbjct: 115 QALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRS 174

Query: 366 LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKL 545
           L     A+   L  L L NN+L  L   L  G   L  L+L  N L VL +        L
Sbjct: 175 LALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSL 234

Query: 546 RYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
           R L L  N+L  L    F GL  L  LDLS N+L ++   ++  L
Sbjct: 235 RELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQL 279



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 46/114 (40%), Positives = 60/114 (52%)
 Frame = +3

Query: 342 LSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEG 521
           L GN L ++P     N + L  L+L   QL +L P  L G   L  LHLE N+L+ L  G
Sbjct: 119 LDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALG 178

Query: 522 FLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLG 683
             A  P L  L L+NN+L+ L  G F GL  L  L+L  NSL  +P+  +  LG
Sbjct: 179 TFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLG 232



 Score = 62.4 bits (150), Expect = 5e-10
 Identities = 57/169 (33%), Positives = 75/169 (44%)
 Frame = +3

Query: 180 QLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQL 359
           +L V   +RN L RLP G   V      L L  N L  +  +  + L +L  L+L G QL
Sbjct: 93  ELSVFCSSRN-LTRLPDG---VPGGTQALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQL 148

Query: 360 RTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 539
            +L  + L    +L  L L  NQL++L          L  L L  NRL  LE+G      
Sbjct: 149 GSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLG 208

Query: 540 KLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 686
            L  L L  N L  L   AFRGL  L  L L+ N L  +   L++ L +
Sbjct: 209 SLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAE 257


>ref|NP_004961.1| insulin-like growth factor-binding protein complex acid labile
           subunit isoform 2 precursor [Homo sapiens].
          Length = 605

 Score =  103 bits (258), Expect = 2e-22
 Identities = 71/205 (34%), Positives = 100/205 (48%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
           NL+ +P    Q + +L  L+L   QL  L  + LL +  L  L L RN L+ L  G F  
Sbjct: 85  NLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAH 144

Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
           + AL +L L  NRL  L+     GL +L  L+L  N L  LP         L  L L  N
Sbjct: 145 TPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGN 204

Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
           +L  L P L  G  +L  L L  N L+ ++       P+L+ L+L+ N +  +A GAF G
Sbjct: 205 RLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLG 264

Query: 606 LQVLDMLDLSNNSLTSVPEGLWASL 680
           L+ L  LDLS+N +  + E  +  L
Sbjct: 265 LKALRWLDLSHNRVAGLLEDTFPGL 289



 Score =  102 bits (254), Expect = 5e-22
 Identities = 69/207 (33%), Positives = 108/207 (52%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
           +L  +P    +G+ +L+EL L+ N+L  L       + +L+ LDL+RNAL+ +   +F  
Sbjct: 181 SLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQ 240

Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
              L  L L  N +  +      GLKALR LDLS N++  L          L +L L +N
Sbjct: 241 LPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHN 300

Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
            + +L P   +    LE L L  NR++ L E       +L  L L++N+L  + AGAF G
Sbjct: 301 AIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLG 360

Query: 606 LQVLDMLDLSNNSLTSVPEGLWASLGK 686
           L  + +++LS N L ++PE ++  LGK
Sbjct: 361 LTNVAVMNLSGNCLRNLPEQVFRGLGK 387



 Score = 99.0 bits (245), Expect = 5e-21
 Identities = 85/284 (29%), Positives = 124/284 (43%), Gaps = 23/284 (8%)
 Frame = +3

Query: 69   LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
            + Q+     +G+  L+ L L +NQL+++ A   L +  + V++L+ N L+ LP  +F+  
Sbjct: 326  IRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGL 385

Query: 249  AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
              LH+L L+ + L  +      GL  LR L L  N L  +  + L    +L  LDL +NQ
Sbjct: 386  GKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQ 445

Query: 429  LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
            L  LP  L +G  KLE+L L  NRL  L    L P  +  +L +++N+L  L       L
Sbjct: 446  LTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPL 505

Query: 609  QVLDMLDLSNNSL---TSVPEG---LWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRW 770
              L  L L NNSL   T  P G   LW               + GNPW C   L  L  +
Sbjct: 506  GRLRYLSLRNNSLRTFTPQPPGLERLW---------------LEGNPWDCGCPLKALRDF 550

Query: 771  LVAN-----------------EDKMFFQNNTHCAGPKALEGQTL 851
             + N                 +   +  NN  CA P  + G  L
Sbjct: 551  ALQNPSAVPRFVQAICEGDDCQPPAYTYNNITCASPPEVVGLDL 594



 Score = 98.6 bits (244), Expect = 7e-21
 Identities = 67/196 (34%), Positives = 100/196 (51%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           L  +    L G+ NL  LHL  NQL  L+       P L  L L+ N L RL  GLF+  
Sbjct: 110 LGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGL 169

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
            +L  L L  N L +L  +  RGL +LR L L+GN+L  L   L +   +L  LDL  N 
Sbjct: 170 GSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNA 229

Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
           L+ +  ++     +L+ L+L+ N +  +  G       LR+L L++N++  L    F GL
Sbjct: 230 LRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGL 289

Query: 609 QVLDMLDLSNNSLTSV 656
             L +L LS+N++ S+
Sbjct: 290 LGLRVLRLSHNAIASL 305



 Score = 91.7 bits (226), Expect = 8e-19
 Identities = 68/196 (34%), Positives = 96/196 (48%)
 Frame = +3

Query: 99  GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 278
           G+  L+ L LS+N++  L       +  L+VL L+ NA+  L P  FK    L  L L  
Sbjct: 264 GLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGH 323

Query: 279 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 458
           NR+  L      GL  L  L L  NQL+ +        T++ +++L  N L+ LP  + R
Sbjct: 324 NRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFR 383

Query: 459 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 638
           G  KL  LHLEG+ L  +          LR LFL +N L  +   +  GL  L  LDL++
Sbjct: 384 GLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTS 443

Query: 639 NSLTSVPEGLWASLGK 686
           N LT +P  L+  LGK
Sbjct: 444 NQLTHLPHRLFQGLGK 459



 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 59/165 (35%), Positives = 79/165 (47%)
 Frame = +3

Query: 186 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 365
           + L L  N L  +PP  F+  ++L  L L+  +L  L+   L GL+ L HL L  NQLR+
Sbjct: 77  QALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRS 136

Query: 366 LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKL 545
           L     A+   L  L L NN+L  L   L  G   L  L+L  N L VL +        L
Sbjct: 137 LALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSL 196

Query: 546 RYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
           R L L  N+L  L    F GL  L  LDLS N+L ++   ++  L
Sbjct: 197 RELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQL 241



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 46/114 (40%), Positives = 60/114 (52%)
 Frame = +3

Query: 342 LSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEG 521
           L GN L ++P     N + L  L+L   QL +L P  L G   L  LHLE N+L+ L  G
Sbjct: 81  LDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALG 140

Query: 522 FLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLG 683
             A  P L  L L+NN+L+ L  G F GL  L  L+L  NSL  +P+  +  LG
Sbjct: 141 TFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLG 194



 Score = 62.4 bits (150), Expect = 5e-10
 Identities = 57/169 (33%), Positives = 75/169 (44%)
 Frame = +3

Query: 180 QLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQL 359
           +L V   +RN L RLP G   V      L L  N L  +  +  + L +L  L+L G QL
Sbjct: 55  ELSVFCSSRN-LTRLPDG---VPGGTQALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQL 110

Query: 360 RTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 539
            +L  + L    +L  L L  NQL++L          L  L L  NRL  LE+G      
Sbjct: 111 GSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLG 170

Query: 540 KLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 686
            L  L L  N L  L   AFRGL  L  L L+ N L  +   L++ L +
Sbjct: 171 SLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAE 219


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 39,150,833
Number of extensions: 1258363
Number of successful extensions: 10052
Number of sequences better than 1.0e-05: 207
Number of HSP's gapped: 8534
Number of HSP's successfully gapped: 654
Length of query: 300
Length of database: 18,297,164
Length adjustment: 102
Effective length of query: 198
Effective length of database: 14,934,836
Effective search space: 2957097528
Effective search space used: 2957097528
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001978
         (900 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_084072.1| leucine-rich alpha-2-glycoprotein [Mus musculus].    338   3e-93
Alignment   gi|NP_082180.2| carboxypeptidase N subunit 2 [Mus musculus].         123   2e-28
Alignment   gi|NP_083249.1| leucine-rich repeat-containing protein 15 precu...   122   5e-28
Alignment   gi|NP_001157792.1| chondroadherin-like [Mus musculus].               119   2e-27
Alignment   gi|NP_032366.2| insulin-like growth factor-binding protein comp...   112   3e-25
Alignment   gi|NP_032174.2| platelet glycoprotein V precursor [Mus musculus].    110   2e-24
Alignment   gi|NP_848846.3| leucine-rich repeat transmembrane neuronal prot...   105   4e-23
Alignment   gi|NP_954693.1| reticulon-4 receptor-like 2 precursor [Mus musc...   101   9e-22
Alignment   gi|NP_848793.1| leucine-rich repeat transmembrane neuronal prot...    99   3e-21
Alignment   gi|NP_031715.1| chondroadherin precursor [Mus musculus].              99   4e-21

>ref|NP_084072.1| leucine-rich alpha-2-glycoprotein [Mus musculus].
          Length = 342

 Score =  338 bits (867), Expect = 3e-93
 Identities = 173/269 (64%), Positives = 209/269 (77%)
 Frame = +3

Query: 57  EFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 236
           EF NLTQ+PA  LQG P L+ELHLS+N+L+ LS + L PVP+L+ LDLTRNAL+ LPPGL
Sbjct: 69  EFSNLTQLPAAALQGCPGLRELHLSSNRLQALSPELLAPVPRLRALDLTRNALRSLPPGL 128

Query: 237 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 416
           F  SA L TLVL+EN+L  + A WL+GL AL HLDL+ NQL +LP  LLA+   LH LDL
Sbjct: 129 FSTSANLSTLVLRENQLREVSAQWLQGLDALGHLDLAENQLSSLPSGLLASLGALHTLDL 188

Query: 417 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 596
           G N L++LP  LLRGP +L+ LHLEGNRLQ LE+  LAPQP LR LFLN+N+L  +A G+
Sbjct: 189 GYNLLESLPEGLLRGPRRLQRLHLEGNRLQRLEDSLLAPQPFLRVLFLNDNQLVGVATGS 248

Query: 597 FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLV 776
           F+GLQ LDMLDLSNNSL+S P GLWA LG+   +M+ GFDIS NPWICD+ L DL RWLV
Sbjct: 249 FQGLQHLDMLDLSNNSLSSTPPGLWAFLGRPTRDMQDGFDISHNPWICDKNLADLCRWLV 308

Query: 777 ANEDKMFFQNNTHCAGPKALEGQTLLAVA 863
           AN +KMF QN+T CAGP+A++GQ LL VA
Sbjct: 309 ANRNKMFSQNDTRCAGPEAMKGQRLLDVA 337



 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 52/135 (38%), Positives = 72/135 (53%)
 Frame = +3

Query: 264 LVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLP 443
           L ++ + L  L A+ L+G   LR L LS N+L+ L  +LLA    L  LDL  N L++LP
Sbjct: 66  LSVEFSNLTQLPAAALQGCPGLRELHLSSNRLQALSPELLAPVPRLRALDLTRNALRSLP 125

Query: 444 PDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDM 623
           P L      L  L L  N+L+ +   +L     L +L L  N+L++L +G    L  L  
Sbjct: 126 PGLFSTSANLSTLVLRENQLREVSAQWLQGLDALGHLDLAENQLSSLPSGLLASLGALHT 185

Query: 624 LDLSNNSLTSVPEGL 668
           LDL  N L S+PEGL
Sbjct: 186 LDLGYNLLESLPEGL 200



 Score = 72.4 bits (176), Expect = 4e-13
 Identities = 47/129 (36%), Positives = 67/129 (51%)
 Frame = +3

Query: 333 HLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVL 512
           HL +  + L  LP   L     L  L L +N+LQ L P+LL    +L  L L  N L+ L
Sbjct: 65  HLSVEFSNLTQLPAAALQGCPGLRELHLSSNRLQALSPELLAPVPRLRALDLTRNALRSL 124

Query: 513 EEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAA 692
             G  +    L  L L  N+L  ++A   +GL  L  LDL+ N L+S+P GL ASLG A 
Sbjct: 125 PPGLFSTSANLSTLVLRENQLREVSAQWLQGLDALGHLDLAENQLSSLPSGLLASLG-AL 183

Query: 693 GNMKVGFDI 719
             + +G+++
Sbjct: 184 HTLDLGYNL 192


>ref|NP_082180.2| carboxypeptidase N subunit 2 [Mus musculus].
          Length = 547

 Score =  123 bits (309), Expect = 2e-28
 Identities = 94/261 (36%), Positives = 123/261 (47%), Gaps = 2/261 (0%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           LTQ+P    Q +  LQ L LSNN L  L    L  +  L+ L L  NA+  L P LF   
Sbjct: 181 LTQLPKGAFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQL 240

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
            +L  L L+ N +  L  S    L  L  L L  N LRTLP  L A+   L  L L  NQ
Sbjct: 241 FSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQ 300

Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
           L+T+P        +L  L L  N +  L E       +L  L L++N LT L    F  L
Sbjct: 301 LETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNL 360

Query: 609 QVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANED 788
             L +L+LS N LT++P G++ +             + GNPW CD  L  L  WL    +
Sbjct: 361 SRLQLLNLSRNQLTTLPGGIFDT-----NYDLFNLALLGNPWQCDCHLSYLTSWLRLYNN 415

Query: 789 KMFFQNNTH--CAGPKALEGQ 845
           ++   +NTH  CAGP  L+GQ
Sbjct: 416 QI---SNTHTFCAGPAYLKGQ 433



 Score =  103 bits (256), Expect = 2e-22
 Identities = 77/244 (31%), Positives = 110/244 (45%), Gaps = 25/244 (10%)
 Frame = +3

Query: 24  PCPLGAQKENREFF----NLTQMPADI---------------------LQGIPNLQELHL 128
           PCP+G     RE F     L  +P DI                       G PNL ++  
Sbjct: 21  PCPVGCDCFGREVFCSDEQLADIPPDIPPHITDIVFVETAFTTVRTRAFSGSPNLTKVVF 80

Query: 129 SNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASW 308
            N Q+  L       +P+L+ L++T + +  L   +F   ++L  L L  +RL  L    
Sbjct: 81  LNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDL 140

Query: 309 LRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHL 488
              +  L  L L GNQLRTLP +L  +  DL  L+L  N L  LP    +    L+ L L
Sbjct: 141 FCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKL 200

Query: 489 EGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGL 668
             N L  L EG L     L+ LFL+ N +T L+   F  L  L+ML L +N++  +P  L
Sbjct: 201 SNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSL 260

Query: 669 WASL 680
           ++SL
Sbjct: 261 FSSL 264



 Score = 98.2 bits (243), Expect = 8e-21
 Identities = 65/196 (33%), Positives = 97/196 (49%)
 Frame = +3

Query: 87  DILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTL 266
           D   G+P LQ+L ++ + + +LSA     +  L+ L L  + L  LP  LF     L +L
Sbjct: 91  DAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLFCHMDILESL 150

Query: 267 VLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPP 446
            L+ N+L  L     + L+ LR L+L+ N L  LP+    + T L +L L NN L  LP 
Sbjct: 151 QLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLARLPE 210

Query: 447 DLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDML 626
             L     L+ L L+GN +  L     +    L  L+L +N +  L    F  L  L  L
Sbjct: 211 GALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFL 270

Query: 627 DLSNNSLTSVPEGLWA 674
            L +N+L ++PEGL+A
Sbjct: 271 SLKDNALRTLPEGLFA 286


>ref|NP_083249.1| leucine-rich repeat-containing protein 15 precursor [Mus musculus].
          Length = 579

 Score =  122 bits (305), Expect = 5e-28
 Identities = 83/271 (30%), Positives = 122/271 (45%)
 Frame = +3

Query: 48  ENREFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLP 227
           ENR    L+ +P      + NLQEL L  NQ+  LS         L+ L L+ N +  LP
Sbjct: 206 ENR----LSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLP 261

Query: 228 PGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHI 407
           PG+F     L+ L L  N L  L       +  LR L L  N + +LP    ++   L +
Sbjct: 262 PGIFMQLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQLQV 321

Query: 408 LDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA 587
           L L +NQL  + P    G   L  L L  N LQ L+         LR + L NN+L  L 
Sbjct: 322 LILSHNQLSYISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQLP 381

Query: 588 AGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYR 767
              F  +  L  + L NN+L ++P G++  LG           +  NPW CD  +  L+ 
Sbjct: 382 GSIFANVNGLMTIQLQNNNLENLPLGIFDHLGNLC-----ELRLYDNPWRCDSNILPLHD 436

Query: 768 WLVANEDKMFFQNNTHCAGPKALEGQTLLAV 860
           WL+ N  ++       C+ P ++ GQ+L+ +
Sbjct: 437 WLILNRARLGTDTLPVCSSPASVRGQSLVII 467



 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 76/228 (33%), Positives = 101/228 (44%), Gaps = 24/228 (10%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLF--- 239
           L  +P  + Q + NL+ L LSNNQL  +          LK L L  N L+ +P G+F   
Sbjct: 113 LKNLPVRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHL 172

Query: 240 ----KVSAA-----------------LHTLVLKENRLDILDASWLRGLKALRHLDLSGNQ 356
               K++                   L  L L ENRL  +       L  L+ L L  NQ
Sbjct: 173 VGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQ 232

Query: 357 LRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQ 536
           + TL   L  N  +L  L L NN +  LPP +      L  L L GN L+ L  G   P 
Sbjct: 233 IGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPM 292

Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
           P LR L+L NN +T+L   AF  L  L +L LS+N L+ +  G +  L
Sbjct: 293 PNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSYISPGAFNGL 340



 Score = 91.7 bits (226), Expect = 7e-19
 Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 2/221 (0%)
 Frame = +3

Query: 24  PCPLGAQKENREFFN--LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLD 197
           P PL     + +  N  +T++P D    I  L  L +  N+L ++       +  L+ L 
Sbjct: 48  PSPLPWNAMSLQILNTHITELPEDKFLNISALIALKMEKNELANIMPGAFRNLGSLRHLS 107

Query: 198 LTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRK 377
           L  N LK LP  LF+    L TL+L  N+L  +  +       L+ L L GN L  +P  
Sbjct: 108 LANNKLKNLPVRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEG 167

Query: 378 LLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLF 557
           +  +   L  L+LGNN    L P + +    L+ L L  NRL  +  G       L+ L 
Sbjct: 168 VFDHLVGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELA 227

Query: 558 LNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
           L  N++ TL+ G F   + L  L LSNN ++ +P G++  L
Sbjct: 228 LQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQL 268



 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 55/164 (33%), Positives = 80/164 (48%)
 Frame = +3

Query: 192 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 371
           L +    +  LP   F   +AL  L +++N L  +     R L +LRHL L+ N+L+ LP
Sbjct: 58  LQILNTHITELPEDKFLNISALIALKMEKNELANIMPGAFRNLGSLRHLSLANNKLKNLP 117

Query: 372 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 551
            +L  +  +L  L L NNQL  + P        L+ L L GN L+ + EG       L  
Sbjct: 118 VRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTK 177

Query: 552 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLG 683
           L L NN  T L+   F+ L  L +L L  N L+ +P G + +LG
Sbjct: 178 LNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALG 221


>ref|NP_001157792.1| chondroadherin-like [Mus musculus].
          Length = 748

 Score =  119 bits (299), Expect = 2e-27
 Identities = 94/272 (34%), Positives = 135/272 (49%), Gaps = 2/272 (0%)
 Frame = +3

Query: 69   LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
            + ++    L G+  L  L+LS+NQL  LSA  L   P L  L L  N   R+P    +  
Sbjct: 460  VAELEPGALAGLDRLLYLYLSHNQLSGLSAAALEGAPNLGYLYLEHNRFLRIPGTALRAL 519

Query: 249  AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
              L +L L++N +D L    L G +ALR L LSGN +  +    L    +L  L L  N+
Sbjct: 520  PTLVSLHLQDNAVDRLAPGDLAGARALRCLYLSGNHITQVSPGALGPARELEKLHLDRNR 579

Query: 429  LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPK-LRYLFLNNNKLTTLAAGAFRG 605
            L+ +P   L G   L+ L L GN L+ L +G   P  + L+ LFLN++ L  ++  AF G
Sbjct: 580  LREVPTGALEGLPALKELQLSGNPLRALPDGAFQPVGRSLQQLFLNSSDLEQISPRAFSG 639

Query: 606  L-QVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVAN 782
            L + L  L L  N L S+P    A LG +   +    D+SGNP+ CD +L  L+RWL   
Sbjct: 640  LGKGLRSLYLHKNQLQSLP----APLGLSGLEL---VDLSGNPFHCDCQLLPLHRWLTG- 691

Query: 783  EDKMFFQNNTHCAGPKALEGQTLLAVAASLEA 878
               +  +    CA P ++ GQ +   A   EA
Sbjct: 692  ---LNLRVGATCATPPSVRGQKVKVAAPVFEA 720



 Score = 94.7 bits (234), Expect = 8e-20
 Identities = 92/304 (30%), Positives = 122/304 (40%), Gaps = 42/304 (13%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNL-QELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFK 242
           NLT++P      IP L Q L L  N L+ L A     +P L  LDL    ++ +  G F+
Sbjct: 51  NLTEVP----NTIPELTQRLDLQGNILKVLPAAAFQDLPHLTHLDLRNCQVEMVAEGAFR 106

Query: 243 VSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGN 422
               L  L L  NRL  L    L GL +LR L+L GN L  L          L  L+L +
Sbjct: 107 GLGRLLLLNLASNRLSTLPQEALDGLGSLRRLELEGNMLEELRPGTFGALGSLTTLNLAH 166

Query: 423 NQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFR 602
           N L  LP    +G L+  WL L  N L VL    LA  P LR L L++N+L  L   A  
Sbjct: 167 NALVYLPAMAFQGLLRTRWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGAALS 226

Query: 603 GLQVLDMLDLSNNSLT----------------SVPEGLWASLGKAA-------------G 695
             + L  L+L +N LT                ++  G   +LG  A             G
Sbjct: 227 QARSLARLELGHNPLTYTGEEDGLALPGLRELALDHGSLQALGPRAFAHCPRLHTLDLRG 286

Query: 696 NMKVGFD------------ISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALE 839
           N                  + GNP  C      L  WLV    +   +++  C GP+ L 
Sbjct: 287 NQLTTLPPLQVPGQLRRLRLQGNPLWCACHARPLLEWLV----RARVRSDGACRGPRRLR 342

Query: 840 GQTL 851
           G+ L
Sbjct: 343 GEAL 346



 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFK- 242
           ++TQ+    L     L++LHL  N+L ++    L  +P LK L L+ N L+ LP G F+ 
Sbjct: 555 HITQVSPGALGPARELEKLHLDRNRLREVPTGALEGLPALKELQLSGNPLRALPDGAFQP 614

Query: 243 VSAALHTLVLKENRLDILDASWLRGL-KALRHLDLSGNQLRTLPRKLLANFTDLHILDLG 419
           V  +L  L L  + L+ +      GL K LR L L  NQL++LP  L    + L ++DL 
Sbjct: 615 VGRSLQQLFLNSSDLEQISPRAFSGLGKGLRSLYLHKNQLQSLPAPL--GLSGLELVDLS 672

Query: 420 NN 425
            N
Sbjct: 673 GN 674


>ref|NP_032366.2| insulin-like growth factor-binding protein complex acid labile
            subunit precursor [Mus musculus].
          Length = 603

 Score =  112 bits (281), Expect = 3e-25
 Identities = 87/289 (30%), Positives = 135/289 (46%), Gaps = 21/289 (7%)
 Frame = +3

Query: 69   LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
            + Q+     +G+  L+ L L++NQ+ ++       +  + V++L+ N L+ LP  +F+  
Sbjct: 326  IRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGL 385

Query: 249  AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
              LH+L L+ + L  +      GL  LR L L  N + ++  + LA  ++L  LDL  NQ
Sbjct: 386  GRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQ 445

Query: 429  LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
            L  LP  L +G  +LE+L L  N+L +L E  L P  +  +L L++N+L T A G F  L
Sbjct: 446  LTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSSL 505

Query: 609  QVLDMLDLSNNSL-TSVP----EGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWL 773
              L  L+L NNSL T VP    E LW               +  NPW C   L  L  + 
Sbjct: 506  GRLRYLNLRNNSLQTFVPQPGLERLW---------------LDANPWDCSCPLKALRDFA 550

Query: 774  VANE----------------DKMFFQNNTHCAGPKALEGQTLLAVAASL 872
            + N                   ++  NN  CAGP  + G  L  ++ +L
Sbjct: 551  LQNPGVVPRFVQTVCEGDDCQPVYTYNNITCAGPANVSGLDLRDISETL 599



 Score =  107 bits (268), Expect = 1e-23
 Identities = 71/207 (34%), Positives = 109/207 (52%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
           +L  +P  + QG+ NL EL L+ N+L  L    L  + +L+ LDL+RNAL+ +   +F  
Sbjct: 181 SLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIH 240

Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
              L  L L  N +  +      G+KALR LDLS N++  L          LH+L L +N
Sbjct: 241 LPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHN 300

Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
            + +L P   +    LE L L  NR++ L E       +L  L LN+N++  +  GAF G
Sbjct: 301 AITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFG 360

Query: 606 LQVLDMLDLSNNSLTSVPEGLWASLGK 686
           L  + +++LS N L S+PE ++  LG+
Sbjct: 361 LFNVAVMNLSGNCLRSLPEHVFQGLGR 387



 Score =  104 bits (260), Expect = 8e-23
 Identities = 71/205 (34%), Positives = 106/205 (51%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
           NL+ +P+   Q + +L  L+L  + L  L  + LL +  L  L L RN L+ L  GLF+ 
Sbjct: 85  NLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLAAGLFRH 144

Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
           + +L +L L  N L  L+    RGL  L  L+L  N L  LP  +     +LH L L  N
Sbjct: 145 TPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGN 204

Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
           +L  L P LL G  +L  L L  N L+ ++       P+L+ L+L+ N +T +A  AF G
Sbjct: 205 KLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLG 264

Query: 606 LQVLDMLDLSNNSLTSVPEGLWASL 680
           ++ L  LDLS+N +  + E  +  L
Sbjct: 265 MKALRWLDLSHNRVAGLLEDTFPGL 289



 Score = 92.0 bits (227), Expect = 5e-19
 Identities = 65/196 (33%), Positives = 98/196 (50%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           L  +    L G+ NL  LHL  N L  L+A      P L  L L  N L RL  GLF+  
Sbjct: 110 LRSLEPQALLGLQNLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGL 169

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
           + L  L L  N L +L  +  +GL  L  L L+GN+L  L   LL    +L  LDL  N 
Sbjct: 170 SHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNA 229

Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
           L+++  ++     +L+ L+L+ N +  +          LR+L L++N++  L    F GL
Sbjct: 230 LRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGL 289

Query: 609 QVLDMLDLSNNSLTSV 656
             L +L L++N++TS+
Sbjct: 290 LGLHVLRLAHNAITSL 305



 Score = 84.7 bits (208), Expect = 9e-17
 Identities = 70/245 (28%), Positives = 108/245 (44%), Gaps = 25/245 (10%)
 Frame = +3

Query: 27  CPLGAQKENREFFN-LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLT 203
           C LG  +E     N L  + A++   +P LQ+L+L  N +  ++ +  L +  L+ LDL+
Sbjct: 215 CGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLS 274

Query: 204 RNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLL 383
            N +  L    F     LH L L  N +  L     + L  L  L L  N++R L  K  
Sbjct: 275 HNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTF 334

Query: 384 ANFTDLHILDLGNNQ------------------------LQTLPPDLLRGPLKLEWLHLE 491
                L +L L +NQ                        L++LP  + +G  +L  LHLE
Sbjct: 335 EGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLE 394

Query: 492 GNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLW 671
            + L  +     A    LR LFL +N ++++   +  GL  L  LDL+ N LT +P  L+
Sbjct: 395 HSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLF 454

Query: 672 ASLGK 686
             LG+
Sbjct: 455 QGLGQ 459



 Score = 72.8 bits (177), Expect = 3e-13
 Identities = 61/165 (36%), Positives = 77/165 (46%)
 Frame = +3

Query: 186 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 365
           + L L  N L  +P   F+  ++L  L L+ + L  L+   L GL+ L HL L  N LR+
Sbjct: 77  RALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRS 136

Query: 366 LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKL 545
           L   L  +   L  L LGNN L  L   L RG   L  L+L  N L VL +        L
Sbjct: 137 LAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNL 196

Query: 546 RYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
             L L  NKLT L      GL  L  LDLS N+L SV   ++  L
Sbjct: 197 HELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHL 241



 Score = 72.0 bits (175), Expect = 6e-13
 Identities = 47/118 (39%), Positives = 60/118 (50%)
 Frame = +3

Query: 330 RHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQV 509
           R L L GN L ++P     N + L  L+L  + L++L P  L G   L  LHLE N L+ 
Sbjct: 77  RALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRS 136

Query: 510 LEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLG 683
           L  G     P L  L L NN L  L  G FRGL  L  L+L  NSL  +P+ ++  LG
Sbjct: 137 LAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLG 194



 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 55/169 (32%), Positives = 77/169 (45%)
 Frame = +3

Query: 180 QLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQL 359
           +L V   +RN L +LP     +  +   L L  N L  + ++  + L +L  L+L G+ L
Sbjct: 55  ELSVFCSSRN-LTQLPDS---IPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWL 110

Query: 360 RTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 539
           R+L  + L    +L+ L L  N L++L   L R    L  L L  N L  LEEG      
Sbjct: 111 RSLEPQALLGLQNLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLS 170

Query: 540 KLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 686
            L  L L  N L  L    F+GL  L  L L+ N LT +   L   LG+
Sbjct: 171 HLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGE 219


>ref|NP_032174.2| platelet glycoprotein V precursor [Mus musculus].
          Length = 567

 Score =  110 bits (274), Expect = 2e-24
 Identities = 75/205 (36%), Positives = 104/205 (50%), Gaps = 1/205 (0%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           L  +  ++ Q + NLQEL L+ NQL  L A     + +LK+LDL+RN L  LP GL    
Sbjct: 134 LRDLDQNLFQQLRNLQELGLNQNQLSFLPANLFSSLRELKLLDLSRNNLTHLPKGLLGAQ 193

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
             L  L+L  N+L  +D+  L  L AL  L L  N LR++         +L  L L  N 
Sbjct: 194 VKLEKLLLYSNQLTSVDSGLLSNLGALTELRLERNHLRSVAPGAFDRLGNLSSLTLSGNL 253

Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
           L++LPP L      +  L L  N L+ L +        LR L+LN   L+TL A AFR L
Sbjct: 254 LESLPPALFLHVSSVSRLTLFENPLEELPDVLFGEMAGLRELWLNGTHLSTLPAAAFRNL 313

Query: 609 QVLDMLDLSNN-SLTSVPEGLWASL 680
             L  L L+ N  L+++P G++  L
Sbjct: 314 SGLQTLGLTRNPRLSALPRGVFQGL 338



 Score =  105 bits (261), Expect = 6e-23
 Identities = 71/191 (37%), Positives = 98/191 (51%)
 Frame = +3

Query: 99  GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 278
           G+  LQ L LS++ +  +       + +LK L LTRN + RLP  +      L  L L  
Sbjct: 72  GMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISRLPRAILDKMVLLEQLFLDH 131

Query: 279 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 458
           N L  LD +  + L+ L+ L L+ NQL  LP  L ++  +L +LDL  N L  LP  LL 
Sbjct: 132 NALRDLDQNLFQQLRNLQELGLNQNQLSFLPANLFSSLRELKLLDLSRNNLTHLPKGLLG 191

Query: 459 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 638
             +KLE L L  N+L  ++ G L+    L  L L  N L ++A GAF  L  L  L LS 
Sbjct: 192 AQVKLEKLLLYSNQLTSVDSGLLSNLGALTELRLERNHLRSVAPGAFDRLGNLSSLTLSG 251

Query: 639 NSLTSVPEGLW 671
           N L S+P  L+
Sbjct: 252 NLLESLPPALF 262



 Score = 98.2 bits (243), Expect = 8e-21
 Identities = 81/280 (28%), Positives = 122/280 (43%), Gaps = 25/280 (8%)
 Frame = +3

Query: 66   NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRL------- 224
            NLT +P  +L     L++L L +NQL  + +  L  +  L  L L RN L+ +       
Sbjct: 181  NLTHLPKGLLGAQVKLEKLLLYSNQLTSVDSGLLSNLGALTELRLERNHLRSVAPGAFDR 240

Query: 225  -----------------PPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGN 353
                             PP LF   +++  L L EN L+ L       +  LR L L+G 
Sbjct: 241  LGNLSSLTLSGNLLESLPPALFLHVSSVSRLTLFENPLEELPDVLFGEMAGLRELWLNGT 300

Query: 354  QLRTLPRKLLANFTDLHILDLGNN-QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLA 530
             L TLP     N + L  L L  N +L  LP  + +G  +L  L L  N L  L +  L 
Sbjct: 301  HLSTLPAAAFRNLSGLQTLGLTRNPRLSALPRGVFQGLRELRVLALHTNALAELRDDALR 360

Query: 531  PQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVG 710
                LR + L +N+L  L    FR L  L+ + L +N L ++P  ++A+L +    +   
Sbjct: 361  GLGHLRQVSLRHNRLRALPRTLFRNLSSLESVQLEHNQLETLPGDVFAALPQLTQVL--- 417

Query: 711  FDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPK 830
              +  NPW+CD  L    +WL  + D +       C GP+
Sbjct: 418  --LGHNPWLCDCGLWPFLQWLRHHPDILGRDEPPQCRGPE 455



 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 62/190 (32%), Positives = 89/190 (46%)
 Frame = +3

Query: 111 LQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLD 290
           L+ L L+ N++  L    L  +  L+ L L  NAL+ L   LF+    L  L L +N+L 
Sbjct: 100 LKTLRLTRNKISRLPRAILDKMVLLEQLFLDHNALRDLDQNLFQQLRNLQELGLNQNQLS 159

Query: 291 ILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLK 470
            L A+    L+ L+ LDLS N L  LP+ LL     L  L L +NQL ++   LL     
Sbjct: 160 FLPANLFSSLRELKLLDLSRNNLTHLPKGLLGAQVKLEKLLLYSNQLTSVDSGLLSNLGA 219

Query: 471 LEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLT 650
           L  L LE N L+ +  G       L  L L+ N L +L    F  +  +  L L  N L 
Sbjct: 220 LTELRLERNHLRSVAPGAFDRLGNLSSLTLSGNLLESLPPALFLHVSSVSRLTLFENPLE 279

Query: 651 SVPEGLWASL 680
            +P+ L+  +
Sbjct: 280 ELPDVLFGEM 289


>ref|NP_848846.3| leucine-rich repeat transmembrane neuronal protein 4 [Mus
           musculus].
          Length = 518

 Score =  105 bits (263), Expect = 4e-23
 Identities = 84/286 (29%), Positives = 128/286 (44%), Gaps = 27/286 (9%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           ++ +  D  QGI  L+EL LS+N++  L  K   PVP L+ LDL+ N L+ L    FK  
Sbjct: 97  ISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFK-- 154

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
                                 GL+ L  L L  N L+T+P ++  +  +L  LDLG N+
Sbjct: 155 ----------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNR 192

Query: 429 LQTLPPDLLRGPLKLEWLHLE------------------------GNRLQVLEEGFLAPQ 536
           L++L  +   G LKL+ LHLE                         NR++ + +G     
Sbjct: 193 LRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSVSQGLTWTW 252

Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASLGKAAGNMKV 707
             L  L L+ N +  +  G F+ L  L  L+L +N LT+V +     W SL        +
Sbjct: 253 SSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETVNAWISL--------I 304

Query: 708 GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
              +SGN W C + +  L+ WL     K   ++   CAGPK ++G+
Sbjct: 305 SITLSGNMWECSRSICPLFYWL--KNFKGNKESTMICAGPKHIQGE 348


>ref|NP_954693.1| reticulon-4 receptor-like 2 precursor [Mus musculus].
          Length = 420

 Score =  101 bits (251), Expect = 9e-22
 Identities = 84/258 (32%), Positives = 115/258 (44%), Gaps = 3/258 (1%)
 Frame = +3

Query: 105 PNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENR 284
           P+ Q L L NN +  L        P L  L L  N L  + PG F+   AL  L L +NR
Sbjct: 60  PSTQRLFLQNNLIRSLRPGTF--GPNLLTLWLFSNNLSTIHPGTFRHLQALEELDLGDNR 117

Query: 285 -LDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRG 461
            L  L+    +GL+ L+ L L   QL +LP  +      L  L L  N L  L  DL   
Sbjct: 118 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFAD 177

Query: 462 PLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNN 641
              L  L L GNRL++L E        L  L L+ N+L  +   AF GL  L +L L NN
Sbjct: 178 LANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNN 237

Query: 642 SLTSVPEGLWASLGKAAGNMKV--GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTH 815
           SL S+P       G+A  ++       ++ NPW CD +   L+ W    +      ++  
Sbjct: 238 SLASLP-------GEALADLPALEFLRLNANPWACDCRARPLWAWF---QRARVSSSDVT 287

Query: 816 CAGPKALEGQTLLAVAAS 869
           CA P   +G+ L A+  S
Sbjct: 288 CATPPERQGRDLRALRDS 305



 Score = 72.8 bits (177), Expect = 3e-13
 Identities = 53/144 (36%), Positives = 68/144 (47%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
           +L  +  D  QG+  LQ LHL   QL  L       +  L+ L L  N+L  L   LF  
Sbjct: 118 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFAD 177

Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
            A L  L L  NRL +L     RGL +L  L L GN+L+ + R      + L IL L NN
Sbjct: 178 LANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNN 237

Query: 426 QLQTLPPDLLRGPLKLEWLHLEGN 497
            L +LP + L     LE+L L  N
Sbjct: 238 SLASLPGEALADLPALEFLRLNAN 261


>ref|NP_848793.1| leucine-rich repeat transmembrane neuronal protein 3 precursor [Mus
           musculus].
          Length = 582

 Score = 99.4 bits (246), Expect = 3e-21
 Identities = 75/291 (25%), Positives = 132/291 (45%), Gaps = 28/291 (9%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
           +L ++  +  +G+  L  L+L +N + ++       + +LK L L+ N +       F+ 
Sbjct: 72  SLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRP 131

Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
              L  L L  N+L  L +   RGL+ L  L L  N LRT+P ++  +  +L +LDLG N
Sbjct: 132 VTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYN 191

Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA---AGA 596
           ++++L  ++  G ++L+ LHLE N+   L          L+ L++  NK++ +    +  
Sbjct: 192 RIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISVIGQTMSWT 251

Query: 597 FRGLQVLDM----------------------LDLSNNSLTSVPEGL---WASLGKAAGNM 701
           +  LQ LD+                      L+L +N LT + + +   W SL       
Sbjct: 252 WSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLN------ 305

Query: 702 KVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLL 854
                ++GN W C + +  L  WL     K   +N   CA PK L+G  ++
Sbjct: 306 --DISLAGNIWECSRNICSLVNWL--RSFKGLRENTIICASPKELQGVNVI 352



 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 50/163 (30%), Positives = 74/163 (45%)
 Frame = +3

Query: 192 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 371
           L L  N+L++L    FK    L  L L  N +  +D +   G++ L+ L LS N++    
Sbjct: 66  LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125

Query: 372 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 551
                  T+L  LDL  NQL +L  +  RG  KL  LHL  N L+ +          L  
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLEL 185

Query: 552 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
           L L  N++ +LA   F G+  L  L L +N  + +   L+  L
Sbjct: 186 LDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRL 228


>ref|NP_031715.1| chondroadherin precursor [Mus musculus].
          Length = 358

 Score = 99.0 bits (245), Expect = 4e-21
 Identities = 81/299 (27%), Positives = 124/299 (41%), Gaps = 46/299 (15%)
 Frame = +3

Query: 93  LQGIPNLQE----LHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 260
           LQ IP + E    L+L  N    L+A     +P L  L L    ++ +  G F+    L 
Sbjct: 42  LQKIPKVSETTKLLNLQRNNFPVLAANSFRTMPNLVSLHLQHCNIREVAAGAFRGLKQLI 101

Query: 261 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 440
            L L  N + +L A     L  L +L L  N++  LPR LL+   +L IL L NN+++ L
Sbjct: 102 YLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIREL 161

Query: 441 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 620
                +G   L WL+L  N L  L+ G L     L    L+ N+L++  + A   L+V++
Sbjct: 162 RAGAFQGAKDLRWLYLSENALSSLQPGSLDDVENLAKFHLDKNQLSSYPSAALSKLRVVE 221

Query: 621 MLDLSNNSLTSVPEGLWASLGKAAGNM--------------------------------- 701
            L LS+N L S+P+  + S G+    +                                 
Sbjct: 222 ELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDAAFSGVTTLKHVHLDNNRLNQ 281

Query: 702 ---KVGFD------ISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTL 851
                 FD      ++ NPW C  +L  L RWL A   +     +  C+ P   +GQ +
Sbjct: 282 LPSSFPFDNLETLTLTNNPWKCTCQLRGLRRWLEAKASR----PDATCSSPAKFKGQRI 336


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 32,959,015
Number of extensions: 1038618
Number of successful extensions: 7884
Number of sequences better than 1.0e-05: 180
Number of HSP's gapped: 6667
Number of HSP's successfully gapped: 550
Length of query: 300
Length of database: 15,617,559
Length adjustment: 101
Effective length of query: 199
Effective length of database: 12,583,923
Effective search space: 2504200677
Effective search space used: 2504200677
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001978
         (900 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003123119.1| PREDICTED: leucine-rich alpha-2-glycoprotein...   549   e-157
Alignment   gi|XP_003123120.1| PREDICTED: leucine-rich alpha-2-glycoprotein...   535   e-152
Alignment   gi|XP_003358805.1| PREDICTED: leucine-rich repeat-containing pr...   127   8e-30
Alignment   gi|XP_003358804.1| PREDICTED: carboxypeptidase N subunit 2 [Sus...   126   1e-29
Alignment   gi|NP_001041651.1| insulin-like growth factor-binding protein c...   109   2e-24
Alignment   gi|XP_003132649.1| PREDICTED: platelet glycoprotein V-like [Sus...   105   3e-23
Alignment   gi|XP_003125026.2| PREDICTED: leucine-rich repeat transmembrane...   105   4e-23
Alignment   gi|XP_003125025.2| PREDICTED: leucine-rich repeat transmembrane...   105   4e-23
Alignment   gi|XP_003124039.2| PREDICTED: leucine-rich repeat transmembrane...   100   8e-22
Alignment   gi|XP_003358145.1| PREDICTED: chondroadherin-like [Sus scrofa].      100   1e-21

>ref|XP_003123119.1| PREDICTED: leucine-rich alpha-2-glycoprotein-like isoform 1 [Sus
           scrofa].
          Length = 356

 Score =  549 bits (1414), Expect = e-157
 Identities = 274/274 (100%), Positives = 274/274 (100%)
 Frame = +3

Query: 57  EFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 236
           EFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL
Sbjct: 83  EFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 142

Query: 237 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 416
           FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL
Sbjct: 143 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 202

Query: 417 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 596
           GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA
Sbjct: 203 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 262

Query: 597 FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLV 776
           FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLV
Sbjct: 263 FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLV 322

Query: 777 ANEDKMFFQNNTHCAGPKALEGQTLLAVAASLEA 878
           ANEDKMFFQNNTHCAGPKALEGQTLLAVAASLEA
Sbjct: 323 ANEDKMFFQNNTHCAGPKALEGQTLLAVAASLEA 356


>ref|XP_003123120.1| PREDICTED: leucine-rich alpha-2-glycoprotein-like isoform 2 [Sus
           scrofa].
          Length = 267

 Score =  535 bits (1377), Expect = e-152
 Identities = 267/267 (100%), Positives = 267/267 (100%)
 Frame = +3

Query: 78  MPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAAL 257
           MPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAAL
Sbjct: 1   MPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAAL 60

Query: 258 HTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT 437
           HTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT
Sbjct: 61  HTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT 120

Query: 438 LPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVL 617
           LPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVL
Sbjct: 121 LPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVL 180

Query: 618 DMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMF 797
           DMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMF
Sbjct: 181 DMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMF 240

Query: 798 FQNNTHCAGPKALEGQTLLAVAASLEA 878
           FQNNTHCAGPKALEGQTLLAVAASLEA
Sbjct: 241 FQNNTHCAGPKALEGQTLLAVAASLEA 267



 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 39/107 (36%), Positives = 51/107 (47%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           L  +P  +L    +L  L L NNQL+ L    L    +L+ L L  N L+ L  G     
Sbjct: 94  LRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQ 153

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLAN 389
             L  L L  N+L  L A   RGL+ L  LDLS N L ++P  L A+
Sbjct: 154 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWAS 200


>ref|XP_003358805.1| PREDICTED: leucine-rich repeat-containing protein 15-like [Sus
            scrofa].
          Length = 581

 Score =  127 bits (319), Expect = 8e-30
 Identities = 84/275 (30%), Positives = 129/275 (46%)
 Frame = +3

Query: 48   ENREFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLP 227
            ENR    L+ +P     G+ NLQEL L  NQ+  L          L+ L L+ N + +LP
Sbjct: 206  ENR----LSDLPMGCFDGLGNLQELALQQNQIGMLPPGLFHNNRNLQRLYLSNNHISQLP 261

Query: 228  PGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHI 407
            PG+F     L+ L L  N L  L       +  LR L L  N + +LP  + ++   L +
Sbjct: 262  PGIFMQLPQLNRLTLFGNSLKELSPGIFGPMHNLRELWLYDNHITSLPDNVFSSLRQLQV 321

Query: 408  LDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA 587
            L L  NQ+  + PD   G ++L+ L L  N LQ L+         L+ + L NN+L  L 
Sbjct: 322  LILSRNQISYISPDAFNGLVELQELSLHTNALQELDGNVFRMLTNLQNISLQNNRLRQLP 381

Query: 588  AGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYR 767
               F  +  L  + L NN L ++P G++  LGK          +  NPW CD  +  L+ 
Sbjct: 382  GNIFANVNDLMTIQLQNNQLENLPLGIFDHLGKLC-----ELRLYDNPWRCDSDILPLHN 436

Query: 768  WLVANEDKMFFQNNTHCAGPKALEGQTLLAVAASL 872
            WL+ N  ++       C  P ++ GQ+L+ ++ S+
Sbjct: 437  WLLLNRARLGTDTLPVCFSPASVRGQSLIIISISV 471



 Score = 95.5 bits (236), Expect = 4e-20
 Identities = 68/204 (33%), Positives = 96/204 (47%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           L  +P  + QG+ NL+ L LS+NQL  +          LK L L  N L+ +P G+F   
Sbjct: 113 LQVLPVGLFQGLDNLESLLLSSNQLVQIQPAHFSQFSNLKELQLHGNHLEYIPDGVFDHL 172

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
             L  L L +N L  L     + L  L+ L L  N+L  LP        +L  L L  NQ
Sbjct: 173 VGLTKLNLGKNSLTHLSPRVFQRLGNLQVLRLYENRLSDLPMGCFDGLGNLQELALQQNQ 232

Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
           +  LPP L      L+ L+L  N +  L  G     P+L  L L  N L  L+ G F  +
Sbjct: 233 IGMLPPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNRLTLFGNSLKELSPGIFGPM 292

Query: 609 QVLDMLDLSNNSLTSVPEGLWASL 680
             L  L L +N +TS+P+ +++SL
Sbjct: 293 HNLRELWLYDNHITSLPDNVFSSL 316



 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 2/221 (0%)
 Frame = +3

Query: 24  PCPLGAQKENREFFN--LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLD 197
           P PL     + +  N  +T++       I  L  L +  N+L  +       +  L+ L 
Sbjct: 48  PTPLPWNAMSLQILNTHITELNESPFLNISALIALRIEKNELSHIMPGAFRNLGSLRYLS 107

Query: 198 LTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRK 377
           L  N L+ LP GLF+    L +L+L  N+L  +  +       L+ L L GN L  +P  
Sbjct: 108 LANNKLQVLPVGLFQGLDNLESLLLSSNQLVQIQPAHFSQFSNLKELQLHGNHLEYIPDG 167

Query: 378 LLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLF 557
           +  +   L  L+LG N L  L P + +    L+ L L  NRL  L  G       L+ L 
Sbjct: 168 VFDHLVGLTKLNLGKNSLTHLSPRVFQRLGNLQVLRLYENRLSDLPMGCFDGLGNLQELA 227

Query: 558 LNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
           L  N++  L  G F   + L  L LSNN ++ +P G++  L
Sbjct: 228 LQQNQIGMLPPGLFHNNRNLQRLYLSNNHISQLPPGIFMQL 268



 Score = 77.4 bits (189), Expect = 1e-14
 Identities = 57/204 (27%), Positives = 95/204 (46%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           L+ +     + + +L+ L L+NN+L+ L       +  L+ L L+ N L ++ P  F   
Sbjct: 89  LSHIMPGAFRNLGSLRYLSLANNKLQVLPVGLFQGLDNLESLLLSSNQLVQIQPAHFSQF 148

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
           + L  L L  N L+ +       L  L  L+L  N L  L  ++     +L +L L  N+
Sbjct: 149 SNLKELQLHGNHLEYIPDGVFDHLVGLTKLNLGKNSLTHLSPRVFQRLGNLQVLRLYENR 208

Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
           L  LP     G   L+ L L+ N++ +L  G       L+ L+L+NN ++ L  G F  L
Sbjct: 209 LSDLPMGCFDGLGNLQELALQQNQIGMLPPGLFHNNRNLQRLYLSNNHISQLPPGIFMQL 268

Query: 609 QVLDMLDLSNNSLTSVPEGLWASL 680
             L+ L L  NSL  +  G++  +
Sbjct: 269 PQLNRLTLFGNSLKELSPGIFGPM 292



 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 55/192 (28%), Positives = 81/192 (42%)
 Frame = +3

Query: 108 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 287
           N   L + N  + +L+    L +  L  L + +N L  + PG F                
Sbjct: 54  NAMSLQILNTHITELNESPFLNISALIALRIEKNELSHIMPGAF---------------- 97

Query: 288 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 467
                   R L +LR+L L+ N+L+ LP  L     +L  L L +NQL  + P       
Sbjct: 98  --------RNLGSLRYLSLANNKLQVLPVGLFQGLDNLESLLLSSNQLVQIQPAHFSQFS 149

Query: 468 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 647
            L+ L L GN L+ + +G       L  L L  N LT L+   F+ L  L +L L  N L
Sbjct: 150 NLKELQLHGNHLEYIPDGVFDHLVGLTKLNLGKNSLTHLSPRVFQRLGNLQVLRLYENRL 209

Query: 648 TSVPEGLWASLG 683
           + +P G +  LG
Sbjct: 210 SDLPMGCFDGLG 221


>ref|XP_003358804.1| PREDICTED: carboxypeptidase N subunit 2 [Sus scrofa].
          Length = 547

 Score =  126 bits (317), Expect = 1e-29
 Identities = 97/315 (30%), Positives = 137/315 (43%), Gaps = 48/315 (15%)
 Frame = +3

Query: 60   FFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLF 239
            F  L  +P  +   +  L+ L L  NQL+ L      P+  LK L+L +N L +LP  LF
Sbjct: 130  FNKLEALPEGLFGHMDALESLQLQGNQLQTLPRHLFQPLRHLKTLNLAQNLLAQLPEELF 189

Query: 240  KVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLG 419
                +L TL L  N L  L       L +L+ L L GN +  LP ++ A    L  L L 
Sbjct: 190  HPLGSLETLRLSNNVLASLPKGVFGKLSSLQELFLDGNSISELPPEVFAQLPHLEKLWLQ 249

Query: 420  NNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP-------------------- 539
             N ++ LPP +      L +L+L+GN L++L  G  A  P                    
Sbjct: 250  RNAIRQLPPAIFSSLGNLTFLNLQGNALKMLPTGLFAHSPGLISLSLSHNQLEMVPEGAF 309

Query: 540  ----KLRYLFLNNNKLTTLAAGAFRG------------------------LQVLDMLDLS 635
                 L  L L++N LT L  G FRG                        L  L++L LS
Sbjct: 310  ANLSSLGSLTLSHNALTHLPTGVFRGLDGLVKLYLGYNNLTALHPALFQNLSKLELLSLS 369

Query: 636  NNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTH 815
             N LT++PEG++ +             + GNPW CD  L  L+ WL    D++ F   T+
Sbjct: 370  RNLLTTLPEGIFNT-----NYNLFNLALHGNPWQCDCHLAYLFNWLHQFSDRL-FNIQTY 423

Query: 816  CAGPKALEGQTLLAV 860
            CAGP  L+GQ + A+
Sbjct: 424  CAGPAYLKGQVVPAL 438



 Score = 97.4 bits (241), Expect = 9e-21
 Identities = 66/206 (32%), Positives = 96/206 (46%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
           + T + A    G PNL ++   N Q+          +P+L+ L++T  A   L   +F  
Sbjct: 60  SFTTVGARAFSGSPNLTKVVFLNTQVCHFGPDAFGGLPRLQDLEITGGAFSNLSSNIFSN 119

Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
            A+L    L  N+L+ L       + AL  L L GNQL+TLPR L      L  L+L  N
Sbjct: 120 LASLVKFTLNFNKLEALPEGLFGHMDALESLQLQGNQLQTLPRHLFQPLRHLKTLNLAQN 179

Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
            L  LP +L      LE L L  N L  L +G       L+ LFL+ N ++ L    F  
Sbjct: 180 LLAQLPEELFHPLGSLETLRLSNNVLASLPKGVFGKLSSLQELFLDGNSISELPPEVFAQ 239

Query: 606 LQVLDMLDLSNNSLTSVPEGLWASLG 683
           L  L+ L L  N++  +P  +++SLG
Sbjct: 240 LPHLEKLWLQRNAIRQLPPAIFSSLG 265



 Score = 96.7 bits (239), Expect = 2e-20
 Identities = 65/196 (33%), Positives = 93/196 (47%)
 Frame = +3

Query: 87  DILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTL 266
           D   G+P LQ+L ++     +LS+     +  L    L  N L+ LP GLF    AL +L
Sbjct: 91  DAFGGLPRLQDLEITGGAFSNLSSNIFSNLASLVKFTLNFNKLEALPEGLFGHMDALESL 150

Query: 267 VLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPP 446
            L+ N+L  L     + L+ L+ L+L+ N L  LP +L      L  L L NN L +LP 
Sbjct: 151 QLQGNQLQTLPRHLFQPLRHLKTLNLAQNLLAQLPEELFHPLGSLETLRLSNNVLASLPK 210

Query: 447 DLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDML 626
            +      L+ L L+GN +  L     A  P L  L+L  N +  L    F  L  L  L
Sbjct: 211 GVFGKLSSLQELFLDGNSISELPPEVFAQLPHLEKLWLQRNAIRQLPPAIFSSLGNLTFL 270

Query: 627 DLSNNSLTSVPEGLWA 674
           +L  N+L  +P GL+A
Sbjct: 271 NLQGNALKMLPTGLFA 286



 Score = 72.8 bits (177), Expect = 2e-13
 Identities = 64/227 (28%), Positives = 90/227 (39%), Gaps = 4/227 (1%)
 Frame = +3

Query: 12  RERPPCPLGAQKENREFF----NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVP 179
           R   PCP+G      E       L  +P DI    P+  ++         + A+     P
Sbjct: 17  RPTQPCPVGCDCFIHEVLCSEEELAAIPRDIP---PHATDIIFVETSFTTVGARAFSGSP 73

Query: 180 QLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQL 359
            L  +      +    P  F     L  L +       L ++    L +L    L+ N+L
Sbjct: 74  NLTKVVFLNTQVCHFGPDAFGGLPRLQDLEITGGAFSNLSSNIFSNLASLVKFTLNFNKL 133

Query: 360 RTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 539
             LP  L  +   L  L L  NQLQTLP  L +    L+ L+L  N L  L E    P  
Sbjct: 134 EALPEGLFGHMDALESLQLQGNQLQTLPRHLFQPLRHLKTLNLAQNLLAQLPEELFHPLG 193

Query: 540 KLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
            L  L L+NN L +L  G F  L  L  L L  NS++ +P  ++A L
Sbjct: 194 SLETLRLSNNVLASLPKGVFGKLSSLQELFLDGNSISELPPEVFAQL 240



 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 52/157 (33%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
 Frame = +3

Query: 315 GLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEG 494
           GL  L+ L+++G     L   + +N   L    L  N+L+ LP  L      LE L L+G
Sbjct: 95  GLPRLQDLEITGGAFSNLSSNIFSNLASLVKFTLNFNKLEALPEGLFGHMDALESLQLQG 154

Query: 495 NRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWA 674
           N+LQ L      P   L+ L L  N L  L    F  L  L+ L LSNN L S+P+G++ 
Sbjct: 155 NQLQTLPRHLFQPLRHLKTLNLAQNLLAQLPEELFHPLGSLETLRLSNNVLASLPKGVFG 214

Query: 675 SLGKAAGNMKVGFDISGNPWICDQKLDDLYR-WLVAN 782
            L         G  IS  P     +L  L + WL  N
Sbjct: 215 KLSSLQELFLDGNSISELPPEVFAQLPHLEKLWLQRN 251


>ref|NP_001041651.1| insulin-like growth factor-binding protein complex acid labile
           subunit [Sus scrofa].
          Length = 606

 Score =  109 bits (272), Expect = 2e-24
 Identities = 73/207 (35%), Positives = 108/207 (52%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
           +L  +P     G+ NL+EL L+ N+L  L       + +L+ LDL+RNAL+ +   +F  
Sbjct: 181 SLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVK 240

Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
              L  L L  N L  +      G+KALR LDLS N++  L          LH+L L +N
Sbjct: 241 LPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHN 300

Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
            L +L P   +    LE L L  NRL+ L E       +L  L LN+N++  + AGAF G
Sbjct: 301 ALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLG 360

Query: 606 LQVLDMLDLSNNSLTSVPEGLWASLGK 686
           L  + +++LS N L ++PE ++  LGK
Sbjct: 361 LFNVAVMNLSGNCLRNLPEQVFRGLGK 387



 Score =  105 bits (263), Expect = 3e-23
 Identities = 88/285 (30%), Positives = 127/285 (44%), Gaps = 24/285 (8%)
 Frame = +3

Query: 69   LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
            L Q+P    +G+  L+ L L++NQ++++ A   L +  + V++L+ N L+ LP  +F+  
Sbjct: 326  LRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGL 385

Query: 249  AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
              LH+L L+ + L  +      GL  LR L L  N L  +  + L    +L  LDL  N+
Sbjct: 386  GKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTANR 445

Query: 429  LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
            L  LP  L +G  KLE+L L  NRL  L    L P  +  +L +++N+L  L       L
Sbjct: 446  LTHLPGRLFQGLGKLEYLLLSRNRLSALPADALGPLQRTFWLDVSHNRLQALPEAVLAPL 505

Query: 609  QVLDMLDLSNNSL-TSVP-----EGLWASLGKAAGNMKVGFDISGNPWICDQKLDDL--- 761
              L  L L NNSL T VP     E LW               + GNPW C   L  L   
Sbjct: 506  GQLRYLSLRNNSLRTFVPQPLGLERLW---------------LEGNPWDCGCPLRALRAL 550

Query: 762  -----------YRWLVANED----KMFFQNNTHCAGPKALEGQTL 851
                        R +   +D      +  NN  CA P A+ G  L
Sbjct: 551  ALQHPAVVPRFVRAVAEGDDDRQPPAYAYNNITCASPPAVSGLDL 595



 Score = 99.0 bits (245), Expect = 3e-21
 Identities = 70/202 (34%), Positives = 100/202 (49%)
 Frame = +3

Query: 51  NREFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPP 230
           N +   L  +    L G+ NL  LHL  NQL  L+A   L  P L  L L  N L R+  
Sbjct: 104 NLQGSGLASLEPQALLGLQNLYHLHLERNQLRSLAAHTFLHTPGLASLGLHNNLLSRVEE 163

Query: 231 GLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHIL 410
           GLF+    L  L L  N L +L  +   GL  LR L L+GN+L  L   L     +L  L
Sbjct: 164 GLFQGLTNLWDLNLGWNSLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGELREL 223

Query: 411 DLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAA 590
           DL  N L+++  ++     KL+ L+L+ N L  +  G       LR+L L++N++  L  
Sbjct: 224 DLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLE 283

Query: 591 GAFRGLQVLDMLDLSNNSLTSV 656
             F GL  L +L L++N+L S+
Sbjct: 284 DTFPGLLGLHVLRLAHNALASL 305



 Score = 88.6 bits (218), Expect = 4e-18
 Identities = 78/245 (31%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
 Frame = +3

Query: 27  CPLGAQKENREFFN-LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLT 203
           C LG  +E     N L  + A++   +P LQ+L+L +N L  ++    L +  L+ LDL+
Sbjct: 215 CGLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLS 274

Query: 204 RNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLL 383
            N +  L    F     LH L L  N L  L     + L  L  L L  N+LR LP K  
Sbjct: 275 HNRVGGLLEDTFPGLLGLHVLRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAF 334

Query: 384 ANFTDLHILDLGNNQLQ------------------------TLPPDLLRGPLKLEWLHLE 491
                L +L L +NQ+Q                         LP  + RG  KL  LHLE
Sbjct: 335 EGLGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLE 394

Query: 492 GNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLW 671
            + L  +     A    LR LFL +N L  +   +  GL  L  LDL+ N LT +P  L+
Sbjct: 395 HSCLGRVGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTANRLTHLPGRLF 454

Query: 672 ASLGK 686
             LGK
Sbjct: 455 QGLGK 459



 Score = 76.3 bits (186), Expect = 2e-14
 Identities = 61/167 (36%), Positives = 79/167 (47%)
 Frame = +3

Query: 186 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 365
           + L L  N    +P G F+  ++L  L L+ + L  L+   L GL+ L HL L  NQLR+
Sbjct: 77  RALWLDSNNFSSVPAGAFRNLSSLGFLNLQGSGLASLEPQALLGLQNLYHLHLERNQLRS 136

Query: 366 LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKL 545
           L      +   L  L L NN L  +   L +G   L  L+L  N L VL +        L
Sbjct: 137 LAAHTFLHTPGLASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPDTAFHGLANL 196

Query: 546 RYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 686
           R L L  NKLT L    F GL  L  LDLS N+L SV   ++  L K
Sbjct: 197 RELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVKLPK 243



 Score = 62.8 bits (151), Expect = 3e-10
 Identities = 56/169 (33%), Positives = 75/169 (44%)
 Frame = +3

Query: 180 QLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQL 359
           +L V   +RN L +LP G   +  A   L L  N    + A   R L +L  L+L G+ L
Sbjct: 55  ELSVFCSSRN-LTQLPDG---IPDAARALWLDSNNFSSVPAGAFRNLSSLGFLNLQGSGL 110

Query: 360 RTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 539
            +L  + L    +L+ L L  NQL++L          L  L L  N L  +EEG      
Sbjct: 111 ASLEPQALLGLQNLYHLHLERNQLRSLAAHTFLHTPGLASLGLHNNLLSRVEEGLFQGLT 170

Query: 540 KLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 686
            L  L L  N L  L   AF GL  L  L L+ N LT +   L+  LG+
Sbjct: 171 NLWDLNLGWNSLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGE 219


>ref|XP_003132649.1| PREDICTED: platelet glycoprotein V-like [Sus scrofa].
          Length = 569

 Score =  105 bits (263), Expect = 3e-23
 Identities = 78/231 (33%), Positives = 106/231 (45%), Gaps = 25/231 (10%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           L  +  ++ Q + +LQEL L+ NQ   L A     +  LK+LDL+ N L  LP GLF   
Sbjct: 134 LKSLDQNMFQKLVSLQELFLNQNQFAFLPASLFAHLENLKLLDLSGNNLTHLPKGLFGAQ 193

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
             L  L+L  N+L  LD+  L  L+AL+ L L  N +R++          L  L L  N+
Sbjct: 194 VKLEKLLLHSNQLVSLDSGLLDSLRALKELQLDSNHIRSVAPGAFDRLRSLSSLTLARNR 253

Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAG----- 593
           L+ LP  L      L +L L  N L+ L E        L+ L+LN  +L TL A      
Sbjct: 254 LEGLPSALFLHSRSLTFLTLFENPLEELPEVLFGEMGGLQELWLNGTQLLTLPAAVFRNL 313

Query: 594 --------------------AFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 686
                               AFRGL  L +L LS+N L S+P GL   LG+
Sbjct: 314 SGLWVLRVTLSPRLSALPEDAFRGLGELRVLALSSNGLASLPAGLLRGLGR 364



 Score =  101 bits (252), Expect = 5e-22
 Identities = 93/311 (29%), Positives = 131/311 (42%), Gaps = 30/311 (9%)
 Frame = +3

Query: 24   PCPLGAQKENREFF-----NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLK 188
            P  L A  EN +       NLT +P  +      L++L L +NQL  L +  L  +  LK
Sbjct: 162  PASLFAHLENLKLLDLSGNNLTHLPKGLFGAQVKLEKLLLHSNQLVSLDSGLLDSLRALK 221

Query: 189  VLD------------------------LTRNALKRLPPGLFKVSAALHTLVLKENRLDIL 296
             L                         L RN L+ LP  LF  S +L  L L EN L+ L
Sbjct: 222  ELQLDSNHIRSVAPGAFDRLRSLSSLTLARNRLEGLPSALFLHSRSLTFLTLFENPLEEL 281

Query: 297  DASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLG-NNQLQTLPPDLLRGPLKL 473
                   +  L+ L L+G QL TLP  +  N + L +L +  + +L  LP D  RG  +L
Sbjct: 282  PEVLFGEMGGLQELWLNGTQLLTLPAAVFRNLSGLWVLRVTLSPRLSALPEDAFRGLGEL 341

Query: 474  EWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTS 653
              L L  N L  L  G L    +LR++ L  N+L TL    F  L  L  + L +N L +
Sbjct: 342  RVLALSSNGLASLPAGLLRGLGRLRHVSLRRNRLRTLPRALFHNLSSLAEVQLDHNQLET 401

Query: 654  VPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKA 833
            +P  ++  L + A  +     +  NPW CD  L     WL  +   +       C GP+ 
Sbjct: 402  LPGDMFEGLPQLAEVL-----LGHNPWRCDCGLRPFLAWLRQHAALVGRAEPPLCHGPRP 456

Query: 834  LEGQTLLAVAA 866
              G  L A+ A
Sbjct: 457  HAGLPLWALPA 467



 Score =  101 bits (251), Expect = 6e-22
 Identities = 68/191 (35%), Positives = 99/191 (51%)
 Frame = +3

Query: 99  GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 278
           G+  LQ L LS++ +  ++   L  + +LK L L+RN +  LP  L      L  L L  
Sbjct: 72  GMTVLQRLMLSDSHVTAIAPGTLNDLIKLKTLRLSRNKITHLPGALLDKLVLLEQLFLDG 131

Query: 279 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 458
           N L  LD +  + L +L+ L L+ NQ   LP  L A+  +L +LDL  N L  LP  L  
Sbjct: 132 NELKSLDQNMFQKLVSLQELFLNQNQFAFLPASLFAHLENLKLLDLSGNNLTHLPKGLFG 191

Query: 459 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 638
             +KLE L L  N+L  L+ G L     L+ L L++N + ++A GAF  L+ L  L L+ 
Sbjct: 192 AQVKLEKLLLHSNQLVSLDSGLLDSLRALKELQLDSNHIRSVAPGAFDRLRSLSSLTLAR 251

Query: 639 NSLTSVPEGLW 671
           N L  +P  L+
Sbjct: 252 NRLEGLPSALF 262



 Score = 85.1 bits (209), Expect = 5e-17
 Identities = 66/206 (32%), Positives = 96/206 (46%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
           ++T +    L  +  L+ L LS N++  L    L  +  L+ L L  N LK L   +F+ 
Sbjct: 85  HVTAIAPGTLNDLIKLKTLRLSRNKITHLPGALLDKLVLLEQLFLDGNELKSLDQNMFQK 144

Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
             +L  L L +N+   L AS    L+ L+ LDLSGN L  LP+ L      L  L L +N
Sbjct: 145 LVSLQELFLNQNQFAFLPASLFAHLENLKLLDLSGNNLTHLPKGLFGAQVKLEKLLLHSN 204

Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
           QL +L   LL     L+ L L+ N ++ +  G       L  L L  N+L  L +  F  
Sbjct: 205 QLVSLDSGLLDSLRALKELQLDSNHIRSVAPGAFDRLRSLSSLTLARNRLEGLPSALFLH 264

Query: 606 LQVLDMLDLSNNSLTSVPEGLWASLG 683
            + L  L L  N L  +PE L+  +G
Sbjct: 265 SRSLTFLTLFENPLEELPEVLFGEMG 290



 Score = 71.2 bits (173), Expect = 7e-13
 Identities = 47/140 (33%), Positives = 74/140 (52%)
 Frame = +3

Query: 258 HTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT 437
           H L+ +  R  + + S+  G+  L+ L LS + +  +    L +   L  L L  N++  
Sbjct: 54  HLLLFRMGRGALQNHSF-SGMTVLQRLMLSDSHVTAIAPGTLNDLIKLKTLRLSRNKITH 112

Query: 438 LPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVL 617
           LP  LL   + LE L L+GN L+ L++        L+ LFLN N+   L A  F  L+ L
Sbjct: 113 LPGALLDKLVLLEQLFLDGNELKSLDQNMFQKLVSLQELFLNQNQFAFLPASLFAHLENL 172

Query: 618 DMLDLSNNSLTSVPEGLWAS 677
            +LDLS N+LT +P+GL+ +
Sbjct: 173 KLLDLSGNNLTHLPKGLFGA 192


>ref|XP_003125026.2| PREDICTED: leucine-rich repeat transmembrane neuronal protein 4
           isoform 2 [Sus scrofa].
          Length = 590

 Score =  105 bits (261), Expect = 4e-23
 Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 27/286 (9%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           ++ +  D  QGI  L+EL LS+N++  L  K   PVP L+ LDL+ N L+ L    FK  
Sbjct: 97  ISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRSLDLSYNKLQTLQSEQFK-- 154

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
                                 GL+ L  L L  N L+T+P ++  +  +L  LDLG N+
Sbjct: 155 ----------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNR 192

Query: 429 LQTLPPDLLRGPLKLEWLHLE------------------------GNRLQVLEEGFLAPQ 536
           L++L  +   G LKL+ LHLE                         NR++ + +G     
Sbjct: 193 LRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTW 252

Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASLGKAAGNMKV 707
             L  L L+ N +  +  G F+ L  L  L+L +N LT++ +     W SL        +
Sbjct: 253 SSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL--------I 304

Query: 708 GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
              +SGN W C + +  L+ WL     K   ++   CAGPK ++G+
Sbjct: 305 SITLSGNMWECTRSICPLFYWL--KNFKGNKESTMICAGPKHIQGE 348


>ref|XP_003125025.2| PREDICTED: leucine-rich repeat transmembrane neuronal protein 4
           isoform 1 [Sus scrofa].
          Length = 590

 Score =  105 bits (261), Expect = 4e-23
 Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 27/286 (9%)
 Frame = +3

Query: 69  LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
           ++ +  D  QGI  L+EL LS+N++  L  K   PVP L+ LDL+ N L+ L    FK  
Sbjct: 97  ISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRSLDLSYNKLQTLQSEQFK-- 154

Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
                                 GL+ L  L L  N L+T+P ++  +  +L  LDLG N+
Sbjct: 155 ----------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNR 192

Query: 429 LQTLPPDLLRGPLKLEWLHLE------------------------GNRLQVLEEGFLAPQ 536
           L++L  +   G LKL+ LHLE                         NR++ + +G     
Sbjct: 193 LRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTW 252

Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASLGKAAGNMKV 707
             L  L L+ N +  +  G F+ L  L  L+L +N LT++ +     W SL        +
Sbjct: 253 SSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL--------I 304

Query: 708 GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
              +SGN W C + +  L+ WL     K   ++   CAGPK ++G+
Sbjct: 305 SITLSGNMWECTRSICPLFYWL--KNFKGNKESTMICAGPKHIQGE 348


>ref|XP_003124039.2| PREDICTED: leucine-rich repeat transmembrane neuronal protein 2
           [Sus scrofa].
          Length = 516

 Score =  100 bits (250), Expect = 8e-22
 Identities = 77/282 (27%), Positives = 126/282 (44%), Gaps = 19/282 (6%)
 Frame = +3

Query: 66  NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
           ++T++  D       L  LHL +NQ+  +       + +LK L L+ N +  LP   F  
Sbjct: 72  HITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQ 131

Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
              LH L L  N+L  L      GL+ L+ L L  N LRT+P +L  +   L  LDL  N
Sbjct: 132 LINLHNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTN 191

Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
           +L++L  +   G +KL  LHLE N+L  +          L  LFL  NK++ L  G    
Sbjct: 192 RLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWT 251

Query: 606 LQVLDMLDLSNNSLTSVPEGLWASLGK----AAGNMKVG---------------FDISGN 728
              L+ LDL+ N + ++   ++ ++         N K+                  +SGN
Sbjct: 252 WGTLEKLDLTGNEIKAIDSTVFETMPNLKILLMDNNKLNSLDAKLFNSLTSLTTVGLSGN 311

Query: 729 PWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLL 854
            W C  ++  L  WL + + +  ++++  C  P   +G+ +L
Sbjct: 312 LWECSPRICALASWLGSFQGR--WEHSILCHSPDHTQGEDIL 351



 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 53/155 (34%), Positives = 74/155 (47%)
 Frame = +3

Query: 192 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 371
           L L  N +  L    F   + L  L L  N++  +     +GL  L+ L LS N++  LP
Sbjct: 66  LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125

Query: 372 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 551
                   +LH LDL  NQL +L P+L  G  KL+ LHL  N L+ +          L +
Sbjct: 126 NTTFTQLINLHNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185

Query: 552 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSV 656
           L L+ N+L +LA   F GL  L  L L +N LT +
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKI 220


>ref|XP_003358145.1| PREDICTED: chondroadherin-like [Sus scrofa].
          Length = 359

 Score =  100 bits (249), Expect = 1e-21
 Identities = 82/297 (27%), Positives = 123/297 (41%), Gaps = 46/297 (15%)
 Frame = +3

Query: 93  LQGIPNLQE----LHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 260
           LQ IP + E    L+L  N    L+A     +P L  L L    ++ +  G F+    L 
Sbjct: 43  LQKIPKVSEKTKLLNLQRNNFPVLAANSFRAMPNLVSLHLQHCQIREVASGAFRGLKQLI 102

Query: 261 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 440
            L L  N + +L A     L  L +L L  N++  LPR LL+   +L IL L NN+++ L
Sbjct: 103 YLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIREL 162

Query: 441 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 620
                +G   L WL+L  N L  L+ G L     L   +L+ N+L++  + A   L+V++
Sbjct: 163 RAGAFQGAKDLRWLYLSENSLSSLQPGSLDDVENLAKFYLDRNQLSSYPSAALSKLRVVE 222

Query: 621 MLDLSNNSLTSVPEGLWASLGKAAGNM--------------------------------- 701
            L LS+N L S+P+  + S G+    +                                 
Sbjct: 223 ELKLSHNPLKSIPDHAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLSQ 282

Query: 702 ---KVGFD------ISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
                 FD      ++ NPW C  +L  L RWL A   +     +  CA P    GQ
Sbjct: 283 LPSNFPFDNLETLTLTNNPWKCTCQLRGLRRWLEAKTSR----PDATCASPAKFRGQ 335


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 24,783,537
Number of extensions: 808283
Number of successful extensions: 6737
Number of sequences better than 1.0e-05: 155
Number of HSP's gapped: 5724
Number of HSP's successfully gapped: 455
Length of query: 300
Length of database: 11,343,932
Length adjustment: 98
Effective length of query: 202
Effective length of database: 8,904,026
Effective search space: 1798613252
Effective search space used: 1798613252
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-001978
         (900 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr02                                                        1675   0.0  

>Sscrofa_Chr02 
||          Length = 162569375

 Score = 1675 bits (845), Expect = 0.0
 Identities = 845/845 (100%)
 Strand = Plus / Plus

                                                                            
Query: 56       agagttcttcaacctgactcagatgcctgctgacatcctccagggcatccctaacctcca 115
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794145 agagttcttcaacctgactcagatgcctgctgacatcctccagggcatccctaacctcca 74794204

                                                                            
Query: 116      ggaactgcacctttccaacaaccagctggaggacctttcagccaagttcctgctgcctgt 175
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794205 ggaactgcacctttccaacaaccagctggaggacctttcagccaagttcctgctgcctgt 74794264

                                                                            
Query: 176      gcctcagctaaaggtgctcgatctgacccgcaacgccctgaaacgcctgccccctggcct 235
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794265 gcctcagctaaaggtgctcgatctgacccgcaacgccctgaaacgcctgccccctggcct 74794324

                                                                            
Query: 236      cttcaaggtctcggctgccctccacaccctggtgctgaaggaaaaccggctagacattct 295
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794325 cttcaaggtctcggctgccctccacaccctggtgctgaaggaaaaccggctagacattct 74794384

                                                                            
Query: 296      ggacgcctcgtggctacgtggcctgaaagccctcaggcatctggacttgtcagggaacca 355
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794385 ggacgcctcgtggctacgtggcctgaaagccctcaggcatctggacttgtcagggaacca 74794444

                                                                            
Query: 356      gctccggacactgccccgcaagctgctggccaacttcactgacctgcacatccttgacct 415
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794445 gctccggacactgccccgcaagctgctggccaacttcactgacctgcacatccttgacct 74794504

                                                                            
Query: 416      tggcaataaccagctgcagactttgccccctgacctcctgaggggccccttgaagttgga 475
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794505 tggcaataaccagctgcagactttgccccctgacctcctgaggggccccttgaagttgga 74794564

                                                                            
Query: 476      atggctgcaccttgagggcaatagattgcaggtgctcgaagagggctttctggcgcccca 535
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794565 atggctgcaccttgagggcaatagattgcaggtgctcgaagagggctttctggcgcccca 74794624

                                                                            
Query: 536      gccaaaactgcgctacctttttctaaacaacaacaagctgaccacgctggcagctggtgc 595
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794625 gccaaaactgcgctacctttttctaaacaacaacaagctgaccacgctggcagctggtgc 74794684

                                                                            
Query: 596      tttccgaggtctgcaggtgctggacatgctggacctctccaacaactcactgaccagtgt 655
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794685 tttccgaggtctgcaggtgctggacatgctggacctctccaacaactcactgaccagtgt 74794744

                                                                            
Query: 656      tcccgaggggctctgggcatccttgggaaaggctgccggcaacatgaaggttggttttga 715
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794745 tcccgaggggctctgggcatccttgggaaaggctgccggcaacatgaaggttggttttga 74794804

                                                                            
Query: 716      catctcagggaacccctggatctgtgaccagaaactagatgacctctatcggtggcttgt 775
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794805 catctcagggaacccctggatctgtgaccagaaactagatgacctctatcggtggcttgt 74794864

                                                                            
Query: 776      ggccaacgaagacaagatgtttttccagaacaacactcactgtgctggccccaaagcctt 835
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794865 ggccaacgaagacaagatgtttttccagaacaacactcactgtgctggccccaaagcctt 74794924

                                                                            
Query: 836      ggagggccagacgctcctggcagtggctgcgtctcttgaggcctagggctagggttaggg 895
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794925 ggagggccagacgctcctggcagtggctgcgtctcttgaggcctagggctagggttaggg 74794984

                     
Query: 896      tgggg 900
                |||||
Sbjct: 74794985 tgggg 74794989



 Score =  113 bits (57), Expect = 2e-22
 Identities = 57/57 (100%)
 Strand = Plus / Plus

                                                                         
Query: 1        ctagatggaaaagggagaggccaccatgtcctcttggagcccagaaggaaaacagag 57
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74792902 ctagatggaaaagggagaggccaccatgtcctcttggagcccagaaggaaaacagag 74792958


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 26,707,182
Number of extensions: 173
Number of successful extensions: 173
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 173
Number of HSP's successfully gapped: 2
Length of query: 900
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 879
Effective length of database: 2,808,413,156
Effective search space: 2468595164124
Effective search space used: 2468595164124
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)