Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001978
(900 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001039642.1| leucine-rich alpha-2-glycoprotein [Bos tauru... 423 e-119
Alignment gi|NP_001094702.1| carboxypeptidase N subunit 2 [Bos taurus]. 137 1e-32
Alignment gi|NP_001069431.1| insulin-like growth factor-binding protein c... 111 7e-25
Alignment gi|XP_002684904.1| PREDICTED: glycoprotein V (platelet) [Bos ta... 110 2e-24
Alignment gi|XP_002691418.1| PREDICTED: leucine rich repeat transmembrane... 105 5e-23
Alignment gi|XP_876920.3| PREDICTED: leucine rich repeat transmembrane ne... 105 5e-23
Alignment gi|NP_001096753.1| leucine-rich repeat transmembrane neuronal p... 100 2e-21
Alignment gi|NP_776444.1| chondroadherin precursor [Bos taurus]. 100 3e-21
Alignment gi|XP_002693760.1| PREDICTED: reticulon 4 receptor-like 2-like ... 99 4e-21
Alignment gi|XP_607470.4| PREDICTED: reticulon 4 receptor-like 2-like [Bo... 99 4e-21
>ref|NP_001039642.1| leucine-rich alpha-2-glycoprotein [Bos taurus].
Length = 346
Score = 423 bits (1088), Expect = e-119
Identities = 214/271 (78%), Positives = 234/271 (86%)
Frame = +3
Query: 57 EFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 236
EFFNLTQ+PAD LQG+PNLQELHLS+N+LED S KFLLPVPQLKVLDLTRN+L L PG
Sbjct: 75 EFFNLTQLPADFLQGVPNLQELHLSSNRLEDFSPKFLLPVPQLKVLDLTRNSLTGLFPGF 134
Query: 237 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 416
F+VSAAL TLVLK N+L L+ASWL GLKALRHLDLS NQL +LP LL NFTDL LDL
Sbjct: 135 FRVSAALCTLVLKGNQLKFLEASWLHGLKALRHLDLSENQLHSLPPGLLENFTDLLTLDL 194
Query: 417 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 596
NNQLQTLPPDLLRGPL LE LHLEGNRLQVL EG LAPQPKLRYLFLN+N+L ++AAGA
Sbjct: 195 SNNQLQTLPPDLLRGPLNLERLHLEGNRLQVLGEGLLAPQPKLRYLFLNDNRLASVAAGA 254
Query: 597 FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLV 776
FRGLQ LDMLDLSNN LT+VP GLW SLGKAA N+K GFDIS NPWICDQ L DLYRWLV
Sbjct: 255 FRGLQKLDMLDLSNNLLTTVPTGLWTSLGKAARNLKDGFDISNNPWICDQNLADLYRWLV 314
Query: 777 ANEDKMFFQNNTHCAGPKALEGQTLLAVAAS 869
ANE+KMFF+N+T CAGP+AL+GQTLLA A S
Sbjct: 315 ANENKMFFRNHTRCAGPEALKGQTLLAAAES 345
>ref|NP_001094702.1| carboxypeptidase N subunit 2 [Bos taurus].
Length = 548
Score = 137 bits (345), Expect = 1e-32
Identities = 92/264 (34%), Positives = 128/264 (48%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
L +P ++ + LQ L LSNNQL L + L+ L L N++ LPP +F
Sbjct: 181 LAYLPEELFHPLGRLQTLRLSNNQLASLPRGLFSRLGSLQELFLDGNSISELPPEVFAQL 240
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
+ L L L+ N + L S L L L L GN L+TLP L L L L +NQ
Sbjct: 241 SCLEKLWLQHNAIGHLPGSVFSALPNLTFLSLQGNALQTLPAGLFTQSPGLVSLSLSHNQ 300
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
L+T+P L L L N L L G L L+L++N LT L F+ L
Sbjct: 301 LETVPEAAFANLTSLGSLMLSHNALTHLPAGVFRGLKGLVKLYLSSNNLTVLHPALFQNL 360
Query: 609 QVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANED 788
L++L LS N LT++PEG++ + + + GNPW CD L L+ WL D
Sbjct: 361 SKLELLSLSRNLLTTLPEGIFDT-----NDNLFNLALYGNPWQCDCHLAYLFSWLYQYSD 415
Query: 789 KMFFQNNTHCAGPKALEGQTLLAV 860
++ F T+CAGP L+GQ + A+
Sbjct: 416 RL-FNIQTYCAGPAYLKGQVVPAL 438
Score = 70.5 bits (171), Expect = 2e-12
Identities = 54/165 (32%), Positives = 70/165 (42%)
Frame = +3
Query: 237 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 416
F S L +V R+ GL L+ L+++G + +N L L
Sbjct: 69 FSSSPNLTKVVFLNTRVCHFRPDAFGGLPGLQDLEITGGNFSNFSADIFSNLISLSKFTL 128
Query: 417 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 596
N L+ LP L + LE L L+GNRLQ L + P L+ L L N L L
Sbjct: 129 NFNMLEALPEGLFQHMDGLESLQLQGNRLQTLPQRLFQPLRCLKTLNLAQNLLAYLPEEL 188
Query: 597 FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNP 731
F L L L LSNN L S+P GL++ LG G IS P
Sbjct: 189 FHPLGRLQTLRLSNNQLASLPRGLFSRLGSLQELFLDGNSISELP 233
>ref|NP_001069431.1| insulin-like growth factor-binding protein complex acid labile
subunit [Bos taurus].
Length = 611
Score = 111 bits (278), Expect = 7e-25
Identities = 93/285 (32%), Positives = 128/285 (44%), Gaps = 24/285 (8%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
L Q+P + G+ L+ L L++NQL++L L + L VL+L+ N L+ LP F+
Sbjct: 331 LRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGL 390
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
A LH+L L+ L L GL LR L L GN + + + L +L LDL NQ
Sbjct: 391 AKLHSLHLEGGCLARLGPLAFAGLSGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQ 450
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
L LP L + +LE+L L NRL L L P + +L +++N+L L A A L
Sbjct: 451 LTHLPGRLFQDLGRLEYLLLARNRLSALPADALGPLQRTFWLDVSHNRLEALPAAALAPL 510
Query: 609 QVLDMLDLSNNSL-TSVP-----EGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRW 770
L L L NNSL T P E LW + GNPW C L L +
Sbjct: 511 SRLRFLSLRNNSLRTFAPQPPGLERLW---------------LEGNPWDCSCALGALRAF 555
Query: 771 LV---------------ANEDK---MFFQNNTHCAGPKALEGQTL 851
+ N+D+ + NN CA P +L G L
Sbjct: 556 ALQQPASVPRFVQALAEGNDDRQPPVLAYNNITCASPPSLAGLDL 600
Score = 108 bits (269), Expect = 8e-24
Identities = 74/207 (35%), Positives = 106/207 (51%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
+LT +P QG+ L+EL L+ N+L L + +L+ LDL+RN L+ + +F
Sbjct: 186 SLTVLPDTAFQGLAGLRELVLAGNKLAYLQPALFCGLGELRELDLSRNTLRSVKANVFVK 245
Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
L L L N + + G+KALR LDLS N++ +L LH+L L +N
Sbjct: 246 LPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLEDSFPGLLGLHVLRLSHN 305
Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
L L P + LE L L NRL+ L E A +L L LN+N+L L G F G
Sbjct: 306 ALAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAFAGLGQLEVLALNDNQLQELRPGGFLG 365
Query: 606 LQVLDMLDLSNNSLTSVPEGLWASLGK 686
L+ L +L+LS+N L +PE + L K
Sbjct: 366 LRNLAVLNLSSNCLRDLPERAFQGLAK 392
Score = 99.4 bits (246), Expect = 4e-21
Identities = 69/202 (34%), Positives = 104/202 (51%)
Frame = +3
Query: 51 NREFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPP 230
N + L + L G+ L LHL +N+L L+A L P L L L+ N L RL
Sbjct: 109 NLQGSGLASLEPQALLGLRGLCHLHLEHNRLHALAAHTFLHTPGLASLGLSNNLLSRLDE 168
Query: 231 GLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHIL 410
GLF+ A L L L N L +L + +GL LR L L+GN+L L L +L L
Sbjct: 169 GLFRGLAHLWDLNLGWNSLTVLPDTAFQGLAGLRELVLAGNKLAYLQPALFCGLGELREL 228
Query: 411 DLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAA 590
DL N L+++ ++ KL+ L+L+ N + + G LR+L L++N++ +L
Sbjct: 229 DLSRNTLRSVKANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLSHNRVGSLLE 288
Query: 591 GAFRGLQVLDMLDLSNNSLTSV 656
+F GL L +L LS+N+L +
Sbjct: 289 DSFPGLLGLHVLRLSHNALAGL 310
Score = 89.4 bits (220), Expect = 4e-18
Identities = 79/245 (32%), Positives = 107/245 (43%), Gaps = 25/245 (10%)
Frame = +3
Query: 27 CPLGAQKENREFFN-LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLT 203
C LG +E N L + A++ +P LQ+L+L +N + ++ L + L+ LDL+
Sbjct: 220 CGLGELRELDLSRNTLRSVKANVFVKLPKLQKLYLDHNLVAAVAPGAFLGMKALRWLDLS 279
Query: 204 RNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLL 383
N + L F LH L L N L L + L L L L N+LR LP +
Sbjct: 280 HNRVGSLLEDSFPGLLGLHVLRLSHNALAGLRPRTFKDLHFLEELQLGHNRLRQLPEEAF 339
Query: 384 ANFTDLHILDLGNNQLQTLPP--------------------DL----LRGPLKLEWLHLE 491
A L +L L +NQLQ L P DL +G KL LHLE
Sbjct: 340 AGLGQLEVLALNDNQLQELRPGGFLGLRNLAVLNLSSNCLRDLPERAFQGLAKLHSLHLE 399
Query: 492 GNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLW 671
G L L A LR LFL N + + + GL L LDL+ N LT +P L+
Sbjct: 400 GGCLARLGPLAFAGLSGLRRLFLKGNSIADVDERSLGGLAELLELDLTANQLTHLPGRLF 459
Query: 672 ASLGK 686
LG+
Sbjct: 460 QDLGR 464
Score = 72.8 bits (177), Expect = 4e-13
Identities = 60/170 (35%), Positives = 75/170 (44%)
Frame = +3
Query: 177 PQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQ 356
P + L L N +P F+ + L L L+ + L L+ L GL+ L HL L N+
Sbjct: 79 PGTRALWLDGNNFSSIPAAAFRNLSGLGFLNLQGSGLASLEPQALLGLRGLCHLHLEHNR 138
Query: 357 LRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQ 536
L L + L L L NN L L L RG L L+L N L VL +
Sbjct: 139 LHALAAHTFLHTPGLASLGLSNNLLSRLDEGLFRGLAHLWDLNLGWNSLTVLPDTAFQGL 198
Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 686
LR L L NKL L F GL L LDLS N+L SV ++ L K
Sbjct: 199 AGLRELVLAGNKLAYLQPALFCGLGELRELDLSRNTLRSVKANVFVKLPK 248
>ref|XP_002684904.1| PREDICTED: glycoprotein V (platelet) [Bos taurus].
Length = 583
Score = 110 bits (274), Expect = 2e-24
Identities = 88/292 (30%), Positives = 129/292 (44%), Gaps = 25/292 (8%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
NLT +P + LQ+L L +N+L L + L + L L L N L+ + PG F
Sbjct: 181 NLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDR 240
Query: 246 SAALHTLVLKENRLDIL-DASWLRG-----------------------LKALRHLDLSGN 353
+L +L L ENRL+ L A +L + LR L L
Sbjct: 241 LRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLKST 300
Query: 354 QLRTLPRKLLANFTDLHILDLG-NNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLA 530
QLRTLP N T L +L++ + +L LP D RG +L+ L L L L G L
Sbjct: 301 QLRTLPAAAFRNLTGLRVLEVSLSPRLSALPEDAFRGLGELQVLALSSTGLASLPAGLLR 360
Query: 531 PQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVG 710
+LR++ L +N+L L + FR L L+ + L +N L ++P + +L + AG +
Sbjct: 361 GLCRLRHVSLRSNRLRALPSALFRNLSSLEEVQLDHNQLETLPGDAFEALPRLAGVL--- 417
Query: 711 FDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLLAVAA 866
+ NPW CD L WL + + C GP G+ L + A
Sbjct: 418 --LGHNPWRCDCGLGPFLAWLRRHAGLVGRAEPPRCHGPGPHAGRLLWTLQA 467
Score = 105 bits (262), Expect = 5e-23
Identities = 75/207 (36%), Positives = 106/207 (51%), Gaps = 1/207 (0%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
L + ++ Q + +LQEL L+ NQL L A + LK+LDL+ N L LP GLF V
Sbjct: 134 LKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQ 193
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
L L+L NRL L++ L L+AL L L N LR++ L L L N+
Sbjct: 194 VKLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENR 253
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
L+ LP L L +L L N L+ L + LR L L + +L TL A AFR L
Sbjct: 254 LEFLPSALFLHSHNLTFLTLSENPLEELPKVLFGEIGGLRELRLKSTQLRTLPAAAFRNL 313
Query: 609 QVLDMLDLS-NNSLTSVPEGLWASLGK 686
L +L++S + L+++PE + LG+
Sbjct: 314 TGLRVLEVSLSPRLSALPEDAFRGLGE 340
Score = 94.7 bits (234), Expect = 9e-20
Identities = 68/187 (36%), Positives = 91/187 (48%)
Frame = +3
Query: 111 LQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLD 290
LQ L LS++ + ++ +LK L L+RN + LP L L L L N L
Sbjct: 76 LQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNELK 135
Query: 291 ILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLK 470
LD + + L L+ L L+ NQL LP L + +L +LDL N L LP L +K
Sbjct: 136 SLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVK 195
Query: 471 LEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLT 650
L+ L L NRL LE G L L L L+ N L ++ GAF L+ L L LS N L
Sbjct: 196 LQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLE 255
Query: 651 SVPEGLW 671
+P L+
Sbjct: 256 FLPSALF 262
Score = 86.7 bits (213), Expect = 3e-17
Identities = 62/185 (33%), Positives = 87/185 (47%)
Frame = +3
Query: 126 LSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDAS 305
L NN D++ L+ L L+ + + + PG F L TL L N++ L ++
Sbjct: 65 LQNNSFSDMTV--------LQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSA 116
Query: 306 WLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLH 485
L L L L L GN+L++L + L L L L NQL LP L L+ L
Sbjct: 117 LLDNLVLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLD 176
Query: 486 LEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEG 665
L GN L L EG Q KL+ L L++N+L +L +G L+ L L L N L S+ G
Sbjct: 177 LSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRALTELQLHTNHLRSIVPG 236
Query: 666 LWASL 680
+ L
Sbjct: 237 AFDRL 241
Score = 80.5 bits (197), Expect = 2e-15
Identities = 66/191 (34%), Positives = 88/191 (46%)
Frame = +3
Query: 111 LQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLD 290
L+ L LS N++ L + L + L+ L L N LK L LF+ L L L +N+L
Sbjct: 100 LKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLA 159
Query: 291 ILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLK 470
L AS L L+ LDLSGN L LP L L L L +N+L +L LL
Sbjct: 160 FLPASLFTHLGNLKLLDLSGNNLTHLPEGLFGVQVKLQKLLLHSNRLASLESGLLDSLRA 219
Query: 471 LEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLT 650
L L L N L+ + G L L L+ N+L L + F L L LS N L
Sbjct: 220 LTELQLHTNHLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPLE 279
Query: 651 SVPEGLWASLG 683
+P+ L+ +G
Sbjct: 280 ELPKVLFGEIG 290
Score = 55.1 bits (131), Expect = 8e-08
Identities = 42/134 (31%), Positives = 63/134 (47%)
Frame = +3
Query: 327 LRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQ 506
L H+ L TL ++ T L L L ++ + + P P+KL+ L L N++
Sbjct: 52 LTHILLFQMGRGTLQNNSFSDMTVLQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKIT 111
Query: 507 VLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 686
L L L LFL+ N+L +L F+ L L L L+ N L +P L+ L
Sbjct: 112 HLPSALLDNLVLLEQLFLDGNELKSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHL-- 169
Query: 687 AAGNMKVGFDISGN 728
GN+K+ D+SGN
Sbjct: 170 --GNLKL-LDLSGN 180
>ref|XP_002691418.1| PREDICTED: leucine rich repeat transmembrane neuronal 2-like [Bos
taurus].
Length = 535
Score = 105 bits (262), Expect = 5e-23
Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 27/286 (9%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
++ + D QGI L+EL LS+N++ L K PVP L+ LDL+ N L+ L FK
Sbjct: 97 ISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRSLDLSYNKLQSLQSEQFK-- 154
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
GL+ L L L N L+T+P ++ + +L LDLG N+
Sbjct: 155 ----------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNR 192
Query: 429 LQTLPPDLLRGPLKLEWLHLE------------------------GNRLQVLEEGFLAPQ 536
L++L + G LKL+ LHLE NR++ + +G
Sbjct: 193 LRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTW 252
Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASLGKAAGNMKV 707
L L L+ N + + G F+ L L L+L +N LT++ + W SL +
Sbjct: 253 SSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL--------I 304
Query: 708 GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
+SGN W C + + L+ WL K ++ CAGPK ++G+
Sbjct: 305 SITLSGNMWECSRSICPLFYWL--KNFKGNKESTMICAGPKHMQGE 348
>ref|XP_876920.3| PREDICTED: leucine rich repeat transmembrane neuronal 2-like
isoform 3 [Bos taurus].
Length = 535
Score = 105 bits (262), Expect = 5e-23
Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 27/286 (9%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
++ + D QGI L+EL LS+N++ L K PVP L+ LDL+ N L+ L FK
Sbjct: 97 ISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRSLDLSYNKLQSLQSEQFK-- 154
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
GL+ L L L N L+T+P ++ + +L LDLG N+
Sbjct: 155 ----------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNR 192
Query: 429 LQTLPPDLLRGPLKLEWLHLE------------------------GNRLQVLEEGFLAPQ 536
L++L + G LKL+ LHLE NR++ + +G
Sbjct: 193 LRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTW 252
Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASLGKAAGNMKV 707
L L L+ N + + G F+ L L L+L +N LT++ + W SL +
Sbjct: 253 SSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL--------I 304
Query: 708 GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
+SGN W C + + L+ WL K ++ CAGPK ++G+
Sbjct: 305 SITLSGNMWECSRSICPLFYWL--KNFKGNKESTMICAGPKHMQGE 348
>ref|NP_001096753.1| leucine-rich repeat transmembrane neuronal protein 3 [Bos taurus].
Length = 536
Score = 100 bits (248), Expect = 2e-21
Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 28/291 (9%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
+L ++ + +G+ L L+L +N + ++ + +LK L L+ N + F+
Sbjct: 72 SLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRP 131
Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
L L L N+L L + RGL+ L L L N LRT+P ++ + +L +LDLG N
Sbjct: 132 VTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYN 191
Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA---AGA 596
++++L ++ G ++L+ LHLE N+ L L+ L+L NK++ + +
Sbjct: 192 RIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKISVIGQTMSWT 251
Query: 597 FRGLQVLDM----------------------LDLSNNSLTSVPEGL---WASLGKAAGNM 701
+ LQ LD+ L+L +N LT + + + W SL
Sbjct: 252 WSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLN------ 305
Query: 702 KVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLL 854
++GN W C + + L WL K +N CA PK L+G ++
Sbjct: 306 --DISLAGNIWECSRNICSLVNWL--KSFKGLRENTIICASPKELQGVNVI 352
Score = 69.3 bits (168), Expect = 4e-12
Identities = 50/163 (30%), Positives = 74/163 (45%)
Frame = +3
Query: 192 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 371
L L N+L++L FK L L L N + +D + G++ L+ L LS N++
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 372 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 551
T+L LDL NQL +L + RG KL LHL N L+ + L
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLEL 185
Query: 552 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
L L N++ +LA F G+ L L L +N + + L+ L
Sbjct: 186 LDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRL 228
>ref|NP_776444.1| chondroadherin precursor [Bos taurus].
Length = 361
Score = 99.8 bits (247), Expect = 3e-21
Identities = 81/297 (27%), Positives = 122/297 (41%), Gaps = 46/297 (15%)
Frame = +3
Query: 93 LQGIPNLQE----LHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 260
LQ IP + E L+L N L+ +P L L L ++ + G F+ L
Sbjct: 45 LQKIPKVSEKTKLLNLQRNNFPVLATNSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLI 104
Query: 261 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 440
L L N + +L A L L +L L N++ LPR LL+ +L IL L NN+++ L
Sbjct: 105 YLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIREL 164
Query: 441 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 620
+G L WL+L N L L+ G L L +L+ N+L++ + A L+V++
Sbjct: 165 RSGAFQGAKDLRWLYLSENSLSSLQPGALDDVENLAKFYLDRNQLSSYPSAALSKLRVVE 224
Query: 621 MLDLSNNSLTSVPEGLWASLGKAAGNM--------------------------------- 701
L LS+N L S+P+ + S G+ +
Sbjct: 225 ELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLHQ 284
Query: 702 ---KVGFD------ISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
FD ++ NPW C +L L RWL A + + CA P GQ
Sbjct: 285 LPSNFPFDSLETLTLTNNPWKCTCQLRGLRRWLEAKTSR----PDATCASPAKFRGQ 337
>ref|XP_002693760.1| PREDICTED: reticulon 4 receptor-like 2-like [Bos taurus].
Length = 448
Score = 99.4 bits (246), Expect = 4e-21
Identities = 84/253 (33%), Positives = 110/253 (43%), Gaps = 1/253 (0%)
Frame = +3
Query: 105 PNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENR 284
P Q L L NN + L P L L L N L + PG F+ AL L L +NR
Sbjct: 88 PGTQRLFLQNNLIGALRPGSF--GPSLLTLWLFSNNLSAIYPGTFRHLQALEELDLGDNR 145
Query: 285 -LDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRG 461
L L+ +GL+ L+ L L QL +LP + L L L N L L DL
Sbjct: 146 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFAD 205
Query: 462 PLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNN 641
L L L GNRL++L E L L L+ N+L + AFRGL L +L L NN
Sbjct: 206 LANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLGRLTILYLFNN 265
Query: 642 SLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCA 821
SL S+P A L ++ NPW CD + L+ W + ++ CA
Sbjct: 266 SLASLPGEALADLPSLE-----FLRLNANPWACDCRARPLWAWF---QRARVSSSDVTCA 317
Query: 822 GPKALEGQTLLAV 860
P G+ L A+
Sbjct: 318 SPPERRGRDLRAL 330
Score = 72.0 bits (175), Expect = 7e-13
Identities = 53/144 (36%), Positives = 67/144 (46%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
+L + D QG+ LQ LHL QL L + L+ L L N+L L LF
Sbjct: 146 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFAD 205
Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
A L L L NRL +L RGL +L L L GN+L+ + R L IL L NN
Sbjct: 206 LANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLGRLTILYLFNN 265
Query: 426 QLQTLPPDLLRGPLKLEWLHLEGN 497
L +LP + L LE+L L N
Sbjct: 266 SLASLPGEALADLPSLEFLRLNAN 289
>ref|XP_607470.4| PREDICTED: reticulon 4 receptor-like 2-like [Bos taurus].
Length = 460
Score = 99.4 bits (246), Expect = 4e-21
Identities = 84/253 (33%), Positives = 110/253 (43%), Gaps = 1/253 (0%)
Frame = +3
Query: 105 PNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENR 284
P Q L L NN + L P L L L N L + PG F+ AL L L +NR
Sbjct: 100 PGTQRLFLQNNLIGALRPGSF--GPSLLTLWLFSNNLSAIYPGTFRHLQALEELDLGDNR 157
Query: 285 -LDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRG 461
L L+ +GL+ L+ L L QL +LP + L L L N L L DL
Sbjct: 158 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFAD 217
Query: 462 PLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNN 641
L L L GNRL++L E L L L+ N+L + AFRGL L +L L NN
Sbjct: 218 LANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLGRLTILYLFNN 277
Query: 642 SLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCA 821
SL S+P A L ++ NPW CD + L+ W + ++ CA
Sbjct: 278 SLASLPGEALADLPSLE-----FLRLNANPWACDCRARPLWAWF---QRARVSSSDVTCA 329
Query: 822 GPKALEGQTLLAV 860
P G+ L A+
Sbjct: 330 SPPERRGRDLRAL 342
Score = 72.0 bits (175), Expect = 7e-13
Identities = 53/144 (36%), Positives = 67/144 (46%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
+L + D QG+ LQ LHL QL L + L+ L L N+L L LF
Sbjct: 158 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFAD 217
Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
A L L L NRL +L RGL +L L L GN+L+ + R L IL L NN
Sbjct: 218 LANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFRGLGRLTILYLFNN 277
Query: 426 QLQTLPPDLLRGPLKLEWLHLEGN 497
L +LP + L LE+L L N
Sbjct: 278 SLASLPGEALADLPSLEFLRLNAN 301
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 38,326,778
Number of extensions: 1252576
Number of successful extensions: 10423
Number of sequences better than 1.0e-05: 223
Number of HSP's gapped: 8924
Number of HSP's successfully gapped: 754
Length of query: 300
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 198
Effective length of database: 14,306,398
Effective search space: 2832666804
Effective search space used: 2832666804
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001978
(900 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_854692.1| PREDICTED: similar to leucine-rich alpha-2-glyc... 412 e-115
Alignment gi|XP_545165.2| PREDICTED: similar to Carboxypeptidase N subuni... 136 2e-32
Alignment gi|XP_545164.2| PREDICTED: similar to leucine rich repeat conta... 126 2e-29
Alignment gi|XP_538355.2| PREDICTED: similar to Ran GTPase-activating pro... 117 1e-26
Alignment gi|XP_852514.1| PREDICTED: similar to Leucine-rich repeat trans... 105 8e-23
Alignment gi|XP_540206.2| PREDICTED: similar to Leucine-rich repeat trans... 105 8e-23
Alignment gi|XP_547189.2| PREDICTED: similar to insulin-like growth facto... 104 1e-22
Alignment gi|XP_852404.1| PREDICTED: similar to Chondroadherin precursor ... 102 5e-22
Alignment gi|XP_542026.2| PREDICTED: similar to Fibromodulin precursor (F... 100 1e-21
Alignment gi|XP_546127.2| PREDICTED: similar to Leucine-rich repeat trans... 100 2e-21
>ref|XP_854692.1| PREDICTED: similar to leucine-rich alpha-2-glycoprotein 1 [Canis
familiaris].
Length = 347
Score = 412 bits (1058), Expect = e-115
Identities = 209/271 (77%), Positives = 231/271 (85%)
Frame = +3
Query: 57 EFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 236
EFFNLTQ+ D LQG+ NLQELHLS NQLE LS K LLPVP LKVLDLTRNAL +LPPGL
Sbjct: 76 EFFNLTQLRPDTLQGVSNLQELHLSTNQLESLSPKLLLPVPLLKVLDLTRNALTQLPPGL 135
Query: 237 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 416
F+VSAALHTLVLKENRL++L+ SWL GLKAL HLDLSGN L+TLP LLAN T L ILDL
Sbjct: 136 FRVSAALHTLVLKENRLEVLEPSWLCGLKALGHLDLSGNHLQTLPPGLLANVTALRILDL 195
Query: 417 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 596
NNQL+TLP DLLRGPL+LE LHLEGNRLQVLEEG LAPQP LRYLFL++NKL +AAGA
Sbjct: 196 SNNQLKTLPLDLLRGPLQLERLHLEGNRLQVLEEGLLAPQPGLRYLFLSDNKLAAVAAGA 255
Query: 597 FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLV 776
FRGLQ LDMLDLSNNSLTSVP+GLW SLG+ +M+ GFDISGNPWICD LDDLYRWLV
Sbjct: 256 FRGLQQLDMLDLSNNSLTSVPKGLWTSLGQPTRDMEDGFDISGNPWICDHNLDDLYRWLV 315
Query: 777 ANEDKMFFQNNTHCAGPKALEGQTLLAVAAS 869
AN+DKMF +N+T CA P+AL+GQTLL A S
Sbjct: 316 ANKDKMFSRNDTRCARPEALKGQTLLEAAES 346
Score = 82.0 bits (201), Expect = 7e-16
Identities = 55/132 (41%), Positives = 71/132 (53%)
Frame = +3
Query: 264 LVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLP 443
LV++ L L L+G+ L+ L LS NQL +L KLL L +LDL N L LP
Sbjct: 73 LVVEFFNLTQLRPDTLQGVSNLQELHLSTNQLESLSPKLLLPVPLLKVLDLTRNALTQLP 132
Query: 444 PDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDM 623
P L R L L L+ NRL+VLE +L L +L L+ N L TL G + L +
Sbjct: 133 PGLFRVSAALHTLVLKENRLEVLEPSWLCGLKALGHLDLSGNHLQTLPPGLLANVTALRI 192
Query: 624 LDLSNNSLTSVP 659
LDLSNN L ++P
Sbjct: 193 LDLSNNQLKTLP 204
>ref|XP_545165.2| PREDICTED: similar to Carboxypeptidase N subunit 2 precursor
(Carboxypeptidase N polypeptide 2) (Carboxypeptidase N 83
kDa chain) (Carboxypeptidase N regulatory subunit)
(Carboxypeptidase N large subunit) [Canis familiaris].
Length = 547
Score = 136 bits (343), Expect = 2e-32
Identities = 99/310 (31%), Positives = 143/310 (46%), Gaps = 44/310 (14%)
Frame = +3
Query: 63 FNLTQ-MPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLF 239
FNL + +P + + L+ L L N+L+ L + P+ +L+ L+L +N L LP GLF
Sbjct: 130 FNLLEALPEGLFGHMEALESLQLQGNRLQSLPRRLFQPLTRLQSLNLAQNLLAHLPEGLF 189
Query: 240 KVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLG 419
+L TL L +N L L GL +LR L L GN + LP + + L L L
Sbjct: 190 DPLGSLQTLRLSDNALSGLPPGVFGGLHSLRELFLDGNSISELPPGVFSRLFRLEQLWLQ 249
Query: 420 NNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAF 599
N + LP + L +L L+GN L+VL G AP P L L L+ NKL ++ GAF
Sbjct: 250 RNAIGHLPLSVFSSLGNLTFLSLQGNALRVLPAGLFAPTPGLLVLSLSYNKLEAVSEGAF 309
Query: 600 RGLQVLDMLDLSNNSLTSVPEG--------------------LWASLGKAAGNMKV---- 707
L L L LS+N++T +P G L +L + N+++
Sbjct: 310 ANLSSLSSLTLSHNAITHLPAGVFRGLEGLVKLYLGSNNLTALHPTLFQNLSNLELLSLS 369
Query: 708 -------------------GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPK 830
+ GNPW CD L L++WL D++ F T+CAGP
Sbjct: 370 RNLLTTLPTGIFDSNYNLFNLALHGNPWQCDCHLAYLFQWLYQYSDRL-FNIQTYCAGPA 428
Query: 831 ALEGQTLLAV 860
L+GQ L A+
Sbjct: 429 YLKGQVLPAL 438
Score = 91.7 bits (226), Expect = 9e-19
Identities = 73/245 (29%), Positives = 103/245 (42%), Gaps = 25/245 (10%)
Frame = +3
Query: 24 PCPLGAQKENREFF----NLTQMPADI---------------------LQGIPNLQELHL 128
PCP G +E F L +P DI G PNL ++
Sbjct: 21 PCPAGCDCFAQELFCSDAGLAAVPPDIPPLATDIVFVETSLSALGSRAFSGSPNLTKVVF 80
Query: 129 SNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASW 308
N L+ L +P+L+ L++T A L F +L N L+ L
Sbjct: 81 LNAPLQHLGPDAFGGLPRLQDLEVTGGAFTNLSSAAFSNLTSLGKFTFNFNLLEALPEGL 140
Query: 309 LRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHL 488
++AL L L GN+L++LPR+L T L L+L N L LP L L+ L L
Sbjct: 141 FGHMEALESLQLQGNRLQSLPRRLFQPLTRLQSLNLAQNLLAHLPEGLFDPLGSLQTLRL 200
Query: 489 EGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGL 668
N L L G LR LFL+ N ++ L G F L L+ L L N++ +P +
Sbjct: 201 SDNALSGLPPGVFGGLHSLRELFLDGNSISELPPGVFSRLFRLEQLWLQRNAIGHLPLSV 260
Query: 669 WASLG 683
++SLG
Sbjct: 261 FSSLG 265
>ref|XP_545164.2| PREDICTED: similar to leucine rich repeat containing 15 [Canis
familiaris].
Length = 614
Score = 126 bits (317), Expect = 2e-29
Identities = 84/271 (30%), Positives = 126/271 (46%)
Frame = +3
Query: 48 ENREFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLP 227
ENR L+++P G NLQEL L NQ+ LS L+ L L+ N + +LP
Sbjct: 237 ENR----LSEIPMGTFDGCGNLQELALQQNQIGMLSPGLFHNNRNLQKLYLSNNHISQLP 292
Query: 228 PGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHI 407
PG+F L+ L L N L L + LR L L N + +LP + +N L +
Sbjct: 293 PGIFMQLPQLNRLTLFGNSLKELSPGIFGPMHNLRELWLYDNHITSLPDNVFSNLHQLQV 352
Query: 408 LDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA 587
L L NQ+ + PD G ++L L L N LQ L+ L+ + L NN+L L
Sbjct: 353 LILSRNQINYISPDAFNGLVELRELSLHTNALQELDGSVFRMLVNLQNISLQNNRLRQLP 412
Query: 588 AGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYR 767
F + L + L NN L ++P G++ LG + NPW CD + L+
Sbjct: 413 GNIFANVNGLMTIQLQNNQLENLPMGIFDHLGNLC-----ELRLYDNPWRCDSDILPLHN 467
Query: 768 WLVANEDKMFFQNNTHCAGPKALEGQTLLAV 860
WL+ N+ ++ C P ++ GQ+L+ +
Sbjct: 468 WLLLNKPRLGTDTLPVCFSPPSVRGQSLIII 498
Score = 89.0 bits (219), Expect = 6e-18
Identities = 65/204 (31%), Positives = 95/204 (46%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
L +P + QG+ NL+ L LS+NQL + LK L L N L+ +P G+F
Sbjct: 144 LQVLPIGLFQGLNNLESLLLSSNQLVQIQPAHFSQFSNLKELQLHGNHLEYIPDGVFDHL 203
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
L L L +N L L + L L+ L L N+L +P +L L L NQ
Sbjct: 204 VGLTKLNLGKNSLTHLSPRIFQRLGNLQVLRLYENRLSEIPMGTFDGCGNLQELALQQNQ 263
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
+ L P L L+ L+L N + L G P+L L L N L L+ G F +
Sbjct: 264 IGMLSPGLFHNNRNLQKLYLSNNHISQLPPGIFMQLPQLNRLTLFGNSLKELSPGIFGPM 323
Query: 609 QVLDMLDLSNNSLTSVPEGLWASL 680
L L L +N +TS+P+ ++++L
Sbjct: 324 HNLRELWLYDNHITSLPDNVFSNL 347
Score = 83.2 bits (204), Expect = 3e-16
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 2/221 (0%)
Frame = +3
Query: 24 PCPLGAQKENREFFN--LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLD 197
P PL + + N +T++ I L L + N+L + + L+ L
Sbjct: 79 PAPLPWNAMSLQILNTHITELNESPFLNISALIALRIEKNELSHIMPGAFRNLGSLRYLS 138
Query: 198 LTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRK 377
L N L+ LP GLF+ L +L+L N+L + + L+ L L GN L +P
Sbjct: 139 LANNKLQVLPIGLFQGLNNLESLLLSSNQLVQIQPAHFSQFSNLKELQLHGNHLEYIPDG 198
Query: 378 LLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLF 557
+ + L L+LG N L L P + + L+ L L NRL + G L+ L
Sbjct: 199 VFDHLVGLTKLNLGKNSLTHLSPRIFQRLGNLQVLRLYENRLSEIPMGTFDGCGNLQELA 258
Query: 558 LNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
L N++ L+ G F + L L LSNN ++ +P G++ L
Sbjct: 259 LQQNQIGMLSPGLFHNNRNLQKLYLSNNHISQLPPGIFMQL 299
Score = 76.6 bits (187), Expect = 3e-14
Identities = 56/204 (27%), Positives = 95/204 (46%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
L+ + + + +L+ L L+NN+L+ L + L+ L L+ N L ++ P F
Sbjct: 120 LSHIMPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLNNLESLLLSSNQLVQIQPAHFSQF 179
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
+ L L L N L+ + L L L+L N L L ++ +L +L L N+
Sbjct: 180 SNLKELQLHGNHLEYIPDGVFDHLVGLTKLNLGKNSLTHLSPRIFQRLGNLQVLRLYENR 239
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
L +P G L+ L L+ N++ +L G L+ L+L+NN ++ L G F L
Sbjct: 240 LSEIPMGTFDGCGNLQELALQQNQIGMLSPGLFHNNRNLQKLYLSNNHISQLPPGIFMQL 299
Query: 609 QVLDMLDLSNNSLTSVPEGLWASL 680
L+ L L NSL + G++ +
Sbjct: 300 PQLNRLTLFGNSLKELSPGIFGPM 323
Score = 68.9 bits (167), Expect = 6e-12
Identities = 54/192 (28%), Positives = 80/192 (41%)
Frame = +3
Query: 108 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 287
N L + N + +L+ L + L L + +N L + PG F
Sbjct: 85 NAMSLQILNTHITELNESPFLNISALIALRIEKNELSHIMPGAF---------------- 128
Query: 288 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 467
R L +LR+L L+ N+L+ LP L +L L L +NQL + P
Sbjct: 129 --------RNLGSLRYLSLANNKLQVLPIGLFQGLNNLESLLLSSNQLVQIQPAHFSQFS 180
Query: 468 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 647
L+ L L GN L+ + +G L L L N LT L+ F+ L L +L L N L
Sbjct: 181 NLKELQLHGNHLEYIPDGVFDHLVGLTKLNLGKNSLTHLSPRIFQRLGNLQVLRLYENRL 240
Query: 648 TSVPEGLWASLG 683
+ +P G + G
Sbjct: 241 SEIPMGTFDGCG 252
>ref|XP_538355.2| PREDICTED: similar to Ran GTPase-activating protein 1 [Canis
familiaris].
Length = 1323
Score = 117 bits (294), Expect = 1e-26
Identities = 92/271 (33%), Positives = 135/271 (49%), Gaps = 2/271 (0%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
+ ++ A L G+ +L L+LS+N+L LSA L P+L L L RN +R+P +
Sbjct: 1040 IAELEAGALAGLASLIYLYLSDNRLAGLSAAALEGAPRLAYLYLERNRFQRVPGTALRAL 1099
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
L +L L+ N ++ L+ L G +ALR L LS N++ + + DL L L NQ
Sbjct: 1100 PGLFSLHLQHNAVERLEPGDLAGSQALRWLYLSANRISHVSPGAIGPAPDLEKLYLDRNQ 1159
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP-KLRYLFLNNNKLTTLAAGAFRG 605
LQ +P L G L L L GN L+ L +G P L++LFLN++ L ++ AF G
Sbjct: 1160 LQGVPTVALEGLPTLLELQLSGNPLRALPDGAFRPVGGSLQHLFLNSSGLEQISPRAFSG 1219
Query: 606 LQV-LDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVAN 782
L L L L N L ++P S + D+SGNP+ CD +L L+RWL+
Sbjct: 1220 LGPWLQSLHLQKNQLQAMPALPHLSQLEL-------IDLSGNPFHCDCQLLPLHRWLIG- 1271
Query: 783 EDKMFFQNNTHCAGPKALEGQTLLAVAASLE 875
+ + CA P + GQ + A A E
Sbjct: 1272 ---LNLRVGATCATPPSAHGQRVKAATAVFE 1299
Score = 100 bits (250), Expect = 1e-21
Identities = 88/258 (34%), Positives = 116/258 (44%)
Frame = +3
Query: 96 QGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 275
+G+ LQ L+L++N+L L + L + L+ LDL RN L+ L PG F AL TL L
Sbjct: 689 RGLGRLQILNLASNRLSSLPQEALDGLGSLQRLDLERNVLEELRPGTFGALGALTTLNLA 748
Query: 276 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 455
N L L A +GL R L LS N L L + LA L L L +N+LQ LP L
Sbjct: 749 HNALVYLPAMTFQGLPRARWLRLSHNALSVLDPEALAGLPALRRLSLQHNELQALPGLAL 808
Query: 456 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 635
L L L N + E P LR L L + L L A AF L LDL
Sbjct: 809 SQARALARLELGHNPFTYVGEEDGLALPGLRELTLEHGALQALDARAFARCPRLHTLDLR 868
Query: 636 NNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTH 815
N L +VP + G ++ + GNP C + L WL + ++
Sbjct: 869 GNQLDTVPP------LQGPGQLR-RLRLHGNPLWCGCRARPLLEWLA----RARVHSDGA 917
Query: 816 CAGPKALEGQTLLAVAAS 869
C GP+ L G+ L A+ S
Sbjct: 918 CRGPRRLGGEALDALRPS 935
Score = 84.3 bits (207), Expect = 1e-16
Identities = 68/200 (34%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
Frame = +3
Query: 66 NLTQMPADILQGIPNL-QELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFK 242
NLT++P +P L Q L L N L+ + +P L LDL ++ + G F+
Sbjct: 634 NLTEVP----DAVPELTQRLDLQGNLLKVIPPAAFRDLPYLTHLDLRHCQVELVAEGAFR 689
Query: 243 VSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGN 422
L L L NRL L L GL +L+ LDL N L L L L+L +
Sbjct: 690 GLGRLQILNLASNRLSSLPQEALDGLGSLQRLDLERNVLEELRPGTFGALGALTTLNLAH 749
Query: 423 NQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFR 602
N L LP +G + WL L N L VL+ LA P LR L L +N+L L A
Sbjct: 750 NALVYLPAMTFQGLPRARWLRLSHNALSVLDPEALAGLPALRRLSLQHNELQALPGLALS 809
Query: 603 GLQVLDMLDLSNNSLTSVPE 662
+ L L+L +N T V E
Sbjct: 810 QARALARLELGHNPFTYVGE 829
Score = 75.9 bits (185), Expect = 5e-14
Identities = 54/145 (37%), Positives = 69/145 (47%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
L +PA QG+P + L LS+N L L + L +P L+ L L N L+ LP +
Sbjct: 752 LVYLPAMTFQGLPRARWLRLSHNALSVLDPEALAGLPALRRLSLQHNELQALPGLALSQA 811
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
AL L L N + L LR L L L+ L + A LH LDL NQ
Sbjct: 812 RALARLELGHNPFTYVGEEDGLALPGLRELTLEHGALQALDARAFARCPRLHTLDLRGNQ 871
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRL 503
L T+PP L+GP +L L L GN L
Sbjct: 872 LDTVPP--LQGPGQLRRLRLHGNPL 894
Score = 58.5 bits (140), Expect = 8e-09
Identities = 51/169 (30%), Positives = 77/169 (45%)
Frame = +3
Query: 183 LKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLR 362
LK LD A +R PP + H +N ++ DA + + LDL GN L+
Sbjct: 603 LKDLDGAGTA-QRCPPTCVCDNPRRHVACRHQNLTEVPDAV----PELTQRLDLQGNLLK 657
Query: 363 TLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPK 542
+P + L LDL + Q++ + RG +L+ L+L NRL L + L
Sbjct: 658 VIPPAAFRDLPYLTHLDLRHCQVELVAEGAFRGLGRLQILNLASNRLSSLPQEALDGLGS 717
Query: 543 LRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKA 689
L+ L L N L L G F L L L+L++N+L +P + L +A
Sbjct: 718 LQRLDLERNVLEELRPGTFGALGALTTLNLAHNALVYLPAMTFQGLPRA 766
>ref|XP_852514.1| PREDICTED: similar to Leucine-rich repeat transmembrane neuronal
protein 4 precursor isoform 2 [Canis familiaris].
Length = 519
Score = 105 bits (261), Expect = 8e-23
Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 27/286 (9%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
++ + D QGI L+EL LS+N++ L K PVP L+ LDL+ N L+ L FK
Sbjct: 98 ISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFK-- 155
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
GL+ L L L N L+T+P ++ + +L LDLG N+
Sbjct: 156 ----------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNR 193
Query: 429 LQTLPPDLLRGPLKLEWLHLE------------------------GNRLQVLEEGFLAPQ 536
L++L + G LKL+ LHLE NR++ + +G
Sbjct: 194 LRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTW 253
Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASLGKAAGNMKV 707
L L L+ N + + G F+ L L L+L +N LT++ + W SL +
Sbjct: 254 SSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL--------I 305
Query: 708 GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
+SGN W C + + L+ WL K ++ CAGPK ++G+
Sbjct: 306 SITLSGNMWECSRSICPLFYWL--KNFKGNKESTMICAGPKHIQGE 349
>ref|XP_540206.2| PREDICTED: similar to Leucine-rich repeat transmembrane neuronal
protein 4 precursor isoform 1 [Canis familiaris].
Length = 518
Score = 105 bits (261), Expect = 8e-23
Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 27/286 (9%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
++ + D QGI L+EL LS+N++ L K PVP L+ LDL+ N L+ L FK
Sbjct: 97 ISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFK-- 154
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
GL+ L L L N L+T+P ++ + +L LDLG N+
Sbjct: 155 ----------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNR 192
Query: 429 LQTLPPDLLRGPLKLEWLHLE------------------------GNRLQVLEEGFLAPQ 536
L++L + G LKL+ LHLE NR++ + +G
Sbjct: 193 LRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTW 252
Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASLGKAAGNMKV 707
L L L+ N + + G F+ L L L+L +N LT++ + W SL +
Sbjct: 253 SSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL--------I 304
Query: 708 GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
+SGN W C + + L+ WL K ++ CAGPK ++G+
Sbjct: 305 SITLSGNMWECSRSICPLFYWL--KNFKGNKESTMICAGPKHIQGE 348
>ref|XP_547189.2| PREDICTED: similar to insulin-like growth factor binding protein,
acid labile subunit [Canis familiaris].
Length = 676
Score = 104 bits (260), Expect = 1e-22
Identities = 70/206 (33%), Positives = 106/206 (51%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
L +P QG+ +L+EL L+ N+L L + +L+ LDL+RNAL+ + +F
Sbjct: 253 LAVLPDAAFQGLASLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNALRSVKANVFVKL 312
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
L L L N + + G+KALR LDLS N++ L LH+L L +N
Sbjct: 313 PKLQKLYLDHNVIAAVAPGAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLSHNA 372
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
+ L P R LE L L NR++ L + +L L LN+N++ + AGAF GL
Sbjct: 373 IAGLRPRTFRDLHFLEELRLGHNRIRQLPDKAFEGLGQLEVLTLNDNQIREIEAGAFVGL 432
Query: 609 QVLDMLDLSNNSLTSVPEGLWASLGK 686
+ +++LS N L S+PE + LG+
Sbjct: 433 LSVAVMNLSGNCLRSLPERTFQGLGR 458
Score = 97.8 bits (242), Expect = 1e-20
Identities = 72/217 (33%), Positives = 103/217 (47%)
Frame = +3
Query: 30 PLGAQKENREFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRN 209
P GA+ + NL +P Q + +L L+L + L L + LL + QL+ L L RN
Sbjct: 144 PAGARALWLDGNNLFSIPEAAFQNLSSLGFLNLQGSGLASLEPRALLGLQQLRHLHLERN 203
Query: 210 ALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLAN 389
L+ L F + L +L L N L +D RGL L L L N L LP
Sbjct: 204 QLRGLGAHTFLHTPGLASLGLSNNMLGRVDEGLFRGLADLWDLHLGWNGLAVLPDAAFQG 263
Query: 390 FTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNN 569
L L L N+L L P L G +L L L N L+ ++ PKL+ L+L++N
Sbjct: 264 LASLRELVLAGNKLAYLQPPLFCGLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHN 323
Query: 570 KLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
+ +A GAF G++ L LDLS+N + + E + L
Sbjct: 324 VIAAVAPGAFLGMKALRWLDLSHNRVAGLLEDTFPGL 360
Score = 97.8 bits (242), Expect = 1e-20
Identities = 68/202 (33%), Positives = 102/202 (50%)
Frame = +3
Query: 51 NREFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPP 230
N + L + L G+ L+ LHL NQL L A L P L L L+ N L R+
Sbjct: 175 NLQGSGLASLEPRALLGLQQLRHLHLERNQLRGLGAHTFLHTPGLASLGLSNNMLGRVDE 234
Query: 231 GLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHIL 410
GLF+ A L L L N L +L + +GL +LR L L+GN+L L L +L L
Sbjct: 235 GLFRGLADLWDLHLGWNGLAVLPDAAFQGLASLRELVLAGNKLAYLQPPLFCGLGELREL 294
Query: 411 DLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAA 590
DL N L+++ ++ KL+ L+L+ N + + G LR+L L++N++ L
Sbjct: 295 DLSRNALRSVKANVFVKLPKLQKLYLDHNVIAAVAPGAFLGMKALRWLDLSHNRVAGLLE 354
Query: 591 GAFRGLQVLDMLDLSNNSLTSV 656
F GL L +L LS+N++ +
Sbjct: 355 DTFPGLLGLHVLRLSHNAIAGL 376
Score = 97.4 bits (241), Expect = 2e-20
Identities = 83/285 (29%), Positives = 124/285 (43%), Gaps = 24/285 (8%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
+ Q+P +G+ L+ L L++NQ+ ++ A + + + V++L+ N L+ LP F+
Sbjct: 397 IRQLPDKAFEGLGQLEVLTLNDNQIREIEAGAFVGLLSVAVMNLSGNCLRSLPERTFQGL 456
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
LH+L L+ L + GL LR L L N + + + L +L LDL N+
Sbjct: 457 GRLHSLHLERGCLGRVRPHAFAGLSGLRRLFLKHNGITAVDEQGLWGLAELLELDLTANR 516
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
L LP +G KLE+L L GN+L L L P +L +L +++N+L L G L
Sbjct: 517 LTHLPARAFQGLGKLEYLLLSGNQLAALAADSLRPLRRLFWLDVSHNRLEALPDGELAEL 576
Query: 609 QVLDMLDLSNNSL------TSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRW 770
L L L+NNSL + E LW + NPW C L L R
Sbjct: 577 GQLRYLSLTNNSLRIFTPPATGLERLW---------------LGDNPWDCGCALGAL-RA 620
Query: 771 LVANE------------------DKMFFQNNTHCAGPKALEGQTL 851
L E ++ NN CAGP + G L
Sbjct: 621 LALREPGVVPRLVQAAPEGDDGQPPIYVSNNITCAGPPGVSGLDL 665
Score = 87.4 bits (215), Expect = 2e-17
Identities = 70/222 (31%), Positives = 103/222 (46%), Gaps = 4/222 (1%)
Frame = +3
Query: 18 RPP--CPLGAQKENREFFN-LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLK 188
+PP C LG +E N L + A++ +P LQ+L+L +N + ++ L + L+
Sbjct: 281 QPPLFCGLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNVIAAVAPGAFLGMKALR 340
Query: 189 VLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTL 368
LDL+ N + L F LH L L N + L R L L L L N++R L
Sbjct: 341 WLDLSHNRVAGLLEDTFPGLLGLHVLRLSHNAIAGLRPRTFRDLHFLEELRLGHNRIRQL 400
Query: 369 PRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLR 548
P K L +L L +NQ++ + G L + ++L GN L+ L E +L
Sbjct: 401 PDKAFEGLGQLEVLTLNDNQIREIEAGAFVGLLSVAVMNLSGNCLRSLPERTFQGLGRLH 460
Query: 549 YLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE-GLW 671
L L L + AF GL L L L +N +T+V E GLW
Sbjct: 461 SLHLERGCLGRVRPHAFAGLSGLRRLFLKHNGITAVDEQGLW 502
Score = 77.8 bits (190), Expect = 1e-14
Identities = 63/167 (37%), Positives = 78/167 (46%)
Frame = +3
Query: 186 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 365
+ L L N L +P F+ ++L L L+ + L L+ L GL+ LRHL L NQLR
Sbjct: 148 RALWLDGNNLFSIPEAAFQNLSSLGFLNLQGSGLASLEPRALLGLQQLRHLHLERNQLRG 207
Query: 366 LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKL 545
L + L L L NN L + L RG L LHL N L VL + L
Sbjct: 208 LGAHTFLHTPGLASLGLSNNMLGRVDEGLFRGLADLWDLHLGWNGLAVLPDAAFQGLASL 267
Query: 546 RYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 686
R L L NKL L F GL L LDLS N+L SV ++ L K
Sbjct: 268 RELVLAGNKLAYLQPPLFCGLGELRELDLSRNALRSVKANVFVKLPK 314
>ref|XP_852404.1| PREDICTED: similar to Chondroadherin precursor (Cartilage
leucine-rich protein) [Canis familiaris].
Length = 355
Score = 102 bits (254), Expect = 5e-22
Identities = 83/297 (27%), Positives = 124/297 (41%), Gaps = 46/297 (15%)
Frame = +3
Query: 93 LQGIPNLQE----LHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 260
LQ IP + E L+L N L+A +P L L L ++ + G F+ L
Sbjct: 39 LQKIPKVSEKTKLLNLQRNNFPVLAANSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLI 98
Query: 261 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 440
L L N + +L A L L +L L N++ LPR LL+ +L IL L NN+++ L
Sbjct: 99 YLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIREL 158
Query: 441 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 620
+G L WL+L N L L+ G L L +L+ N+L++ A A L+V++
Sbjct: 159 RAGAFQGAKDLRWLYLSENALTSLQPGALDDVENLAKFYLDRNQLSSYPAAALSKLRVVE 218
Query: 621 MLDLSNNSLTSVPEGLWASLGKAAGNM--------------------------------- 701
L LS+N L S+P+ + S G+ +
Sbjct: 219 ELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLNQ 278
Query: 702 ---KVGFD------ISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
FD ++ NPW C +L L RWL A + + CA P +GQ
Sbjct: 279 LPSNFPFDSLETLTLTNNPWKCTCQLRGLRRWLEAKTSR----PDATCASPAKFKGQ 331
>ref|XP_542026.2| PREDICTED: similar to Fibromodulin precursor (FM) (Collagen-binding
59 kDa protein) (Keratan sulfate proteoglycan
fibromodulin) (KSPG fibromodulin) [Canis familiaris].
Length = 593
Score = 100 bits (250), Expect = 1e-21
Identities = 79/199 (39%), Positives = 111/199 (55%), Gaps = 7/199 (3%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLED--LSAKFLLPVPQLKVLDLTRNALKRLPPGLF 239
++T + A L G+ L EL+L+ N+L + + P+ L+ LDL N L RLP GL
Sbjct: 381 HVTTLGARDLAGLRGLAELNLAYNRLVSARVHRRAFRPLRALRSLDLAGNQLTRLPGGL- 439
Query: 240 KVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT--LPRKLLANFTDLHILD 413
+L TL L+ N+L L+ L GL LR L L+ N+LR + L +LD
Sbjct: 440 --PGSLRTLRLQRNQLRALEPELLAGLDQLRELSLAHNRLRIGDIGPGTWHELQALQVLD 497
Query: 414 LGNNQLQTLPPDLLRGPLKLEWLHLEGNRL-QVLEEGFLAPQPKLRYLFLNNNKL--TTL 584
L +N+L +PPDL P LE LHL+GNR+ V E FL+ P+LR LFL N+L T++
Sbjct: 498 LSHNELSFVPPDL---PEALEELHLQGNRIGHVGSEAFLS-TPRLRALFLRANRLHMTSI 553
Query: 585 AAGAFRGLQVLDMLDLSNN 641
A AF GL L ++D + N
Sbjct: 554 APEAFLGLLHLRVVDTAGN 572
Score = 94.0 bits (232), Expect = 2e-19
Identities = 81/226 (35%), Positives = 112/226 (49%), Gaps = 6/226 (2%)
Frame = +3
Query: 21 PPCPLGAQKENREFFNLTQMPADILQGIPNLQELHLSNNQLED--LSAKFLLPVPQLKVL 194
P P ++ + + ++++P L +L+EL+L +NQL D L A + L+ L
Sbjct: 224 PSLPPSLERLHLQNNLISKVPRGALSRQTHLRELYLQHNQLTDSGLDATTFSKLRHLEYL 283
Query: 195 DLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT--L 368
DL+ N L +P GL + A LH L NR+ ++A+ LRG + LR+L L NQL L
Sbjct: 284 DLSHNQLASVPAGLPRTLAVLH---LGRNRIRWVEAARLRGARGLRYLLLQHNQLGAEGL 340
Query: 369 PRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLR 548
P L LH L L N L +PP L P +L L L N + L LA L
Sbjct: 341 PAGALRPLRGLHTLHLYGNGLHRVPPAL---PRRLRALVLPHNHVTTLGARDLAGLRGLA 397
Query: 549 YLFLNNNKLTTLAAG--AFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
L L N+L + AFR L+ L LDL+ N LT +P GL SL
Sbjct: 398 ELNLAYNRLVSARVHRRAFRPLRALRSLDLAGNQLTRLPGGLPGSL 443
Score = 83.2 bits (204), Expect = 3e-16
Identities = 71/212 (33%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Frame = +3
Query: 114 QELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKR--LPPGLFKVSAALHTLVLKENRL 287
Q L L NNQL++L L + L+ L+L N + LP F+ L + + N+L
Sbjct: 89 QHLSLQNNQLQELPYNELSRLRSLRTLNLHNNLISSEGLPDEAFESLTQLQHIYVAHNKL 148
Query: 288 DILDASWLRGLK---------------------ALRHLDLSGNQLRT--LPRKLLANFTD 398
+ R L+ ALR + L NQL LP
Sbjct: 149 SVAPQFLPRSLRVADLAANQVTEIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFHGSEA 208
Query: 399 LHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLT 578
+ L L +N+L LPP L P LE LHL+ N + + G L+ Q LR L+L +N+LT
Sbjct: 209 VATLSLSSNRLSYLPPSL---PPSLERLHLQNNLISKVPRGALSRQTHLRELYLQHNQLT 265
Query: 579 T--LAAGAFRGLQVLDMLDLSNNSLTSVPEGL 668
L A F L+ L+ LDLS+N L SVP GL
Sbjct: 266 DSGLDATTFSKLRHLEYLDLSHNQLASVPAGL 297
Score = 54.3 bits (129), Expect = 2e-07
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 25/145 (17%)
Frame = +3
Query: 321 KALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT--LPPDLLRGPLKLEWLHLEG 494
+A +HL L NQL+ LP L+ L L+L NN + + LP + +L+ +++
Sbjct: 86 RAAQHLSLQNNQLQELPYNELSRLRSLRTLNLHNNLISSEGLPDEAFESLTQLQHIYVAH 145
Query: 495 NRLQVLEEGF---------------------LAPQPKLRYLFLNNNKLTT--LAAGAFRG 605
N+L V + +P LR ++L+NN+L+ L AF G
Sbjct: 146 NKLSVAPQFLPRSLRVADLAANQVTEIFPLTFGEKPALRSVYLHNNQLSNAGLPPDAFHG 205
Query: 606 LQVLDMLDLSNNSLTSVPEGLWASL 680
+ + L LS+N L+ +P L SL
Sbjct: 206 SEAVATLSLSSNRLSYLPPSLPPSL 230
>ref|XP_546127.2| PREDICTED: similar to Leucine-rich repeat transmembrane neuronal
protein 3 precursor isoform 1 [Canis familiaris].
Length = 581
Score = 100 bits (248), Expect = 2e-21
Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 28/291 (9%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
+L ++ + +G+ L L+L +N + ++ + +LK L L+ N + F+
Sbjct: 72 SLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRP 131
Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
L L L N+L L + RGL+ L L L N LRT+P ++ + +L +LDLG N
Sbjct: 132 VTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYN 191
Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA---AGA 596
++++L ++ G ++L+ LHLE N+ L L+ L+L NK++ + +
Sbjct: 192 RIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYLQWNKISVIGQTMSWT 251
Query: 597 FRGLQVLDM----------------------LDLSNNSLTSVPEGL---WASLGKAAGNM 701
+ LQ LD+ L+L +N LT + + + W SL
Sbjct: 252 WSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLN------ 305
Query: 702 KVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLL 854
++GN W C + + L WL K +N CA PK L+G ++
Sbjct: 306 --DISLAGNIWECSRNICSLVNWL--KSFKGLRENTIICASPKELQGVNVM 352
Score = 69.3 bits (168), Expect = 5e-12
Identities = 50/163 (30%), Positives = 74/163 (45%)
Frame = +3
Query: 192 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 371
L L N+L++L FK L L L N + +D + G++ L+ L LS N++
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 372 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 551
T+L LDL NQL +L + RG KL LHL N L+ + L
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLEL 185
Query: 552 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
L L N++ +LA F G+ L L L +N + + L+ L
Sbjct: 186 LDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRL 228
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 39,905,838
Number of extensions: 1280214
Number of successful extensions: 9686
Number of sequences better than 1.0e-05: 158
Number of HSP's gapped: 8428
Number of HSP's successfully gapped: 467
Length of query: 300
Length of database: 18,874,504
Length adjustment: 102
Effective length of query: 198
Effective length of database: 15,474,232
Effective search space: 3063897936
Effective search space used: 3063897936
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001978
(900 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_443204.1| leucine-rich alpha-2-glycoprotein precursor [Ho... 395 e-110
Alignment gi|NP_001073982.2| carboxypeptidase N subunit 2 [Homo sapiens]. 124 1e-28
Alignment gi|NP_570843.2| leucine-rich repeat-containing protein 15 isofo... 121 1e-27
Alignment gi|NP_001128529.2| leucine-rich repeat-containing protein 15 is... 121 1e-27
Alignment gi|NP_612490.1| chondroadherin-like protein precursor [Homo sap... 117 2e-26
Alignment gi|NP_000164.5| platelet glycoprotein Ib alpha chain precursor ... 114 2e-25
Alignment gi|NP_079269.4| leucine-rich repeat transmembrane neuronal prot... 105 7e-23
Alignment gi|NP_001128217.1| leucine-rich repeat transmembrane neuronal p... 105 7e-23
Alignment gi|NP_001139478.1| insulin-like growth factor-binding protein c... 103 2e-22
Alignment gi|NP_004961.1| insulin-like growth factor-binding protein comp... 103 2e-22
>ref|NP_443204.1| leucine-rich alpha-2-glycoprotein precursor [Homo sapiens].
Length = 347
Score = 395 bits (1015), Expect = e-110
Identities = 199/271 (73%), Positives = 226/271 (83%)
Frame = +3
Query: 57 EFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 236
EFFNLT +PA++LQG LQELHLS+N LE LS +FL PVPQL+VLDLTRNAL LPPGL
Sbjct: 76 EFFNLTHLPANLLQGASKLQELHLSSNGLESLSPEFLRPVPQLRVLDLTRNALTGLPPGL 135
Query: 237 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 416
F+ SA L TLVLKEN+L++L+ SWL GLKAL HLDLSGN+LR LP LLANFT L LDL
Sbjct: 136 FQASATLDTLVLKENQLEVLEVSWLHGLKALGHLDLSGNRLRKLPPGLLANFTLLRTLDL 195
Query: 417 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 596
G NQL+TLPPDLLRGPL+LE LHLEGN+LQVL + L PQP LRYLFLN NKL +AAGA
Sbjct: 196 GENQLETLPPDLLRGPLQLERLHLEGNKLQVLGKDLLLPQPDLRYLFLNGNKLARVAAGA 255
Query: 597 FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLV 776
F+GL+ LDMLDLSNNSL SVPEGLWASLG+ +M+ GFDISGNPWICDQ L DLYRWL
Sbjct: 256 FQGLRQLDMLDLSNNSLASVPEGLWASLGQPNWDMRDGFDISGNPWICDQNLSDLYRWLQ 315
Query: 777 ANEDKMFFQNNTHCAGPKALEGQTLLAVAAS 869
A +DKMF QN+T CAGP+A++GQTLLAVA S
Sbjct: 316 AQKDKMFSQNDTRCAGPEAVKGQTLLAVAKS 346
Score = 60.5 bits (145), Expect = 2e-09
Identities = 42/115 (36%), Positives = 53/115 (46%)
Frame = +3
Query: 333 HLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVL 512
HL + L LP LL + L L L +N L++L P+ LR +L L L N L L
Sbjct: 72 HLAVEFFNLTHLPANLLQGASKLQELHLSSNGLESLSPEFLRPVPQLRVLDLTRNALTGL 131
Query: 513 EEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWAS 677
G L L L N+L L GL+ L LDLS N L +P GL A+
Sbjct: 132 PPGLFQASATLDTLVLKENQLEVLEVSWLHGLKALGHLDLSGNRLRKLPPGLLAN 186
>ref|NP_001073982.2| carboxypeptidase N subunit 2 [Homo sapiens].
Length = 545
Score = 124 bits (311), Expect = 1e-28
Identities = 91/283 (32%), Positives = 132/283 (46%), Gaps = 19/283 (6%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
L +P + Q + +L+ L+L+ N L L + P+ L+ L L+ NAL LP G+F
Sbjct: 157 LQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKL 216
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
+L L L N + L L L L L N + LP + A+ +L L L N
Sbjct: 217 GSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNM 276
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
L+ LP L L L L N+L+ + EG A LR L L+ N +T L AG FR L
Sbjct: 277 LRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDL 336
Query: 609 QVLDMLDLSNNSLTSVPEGLWASLGK--------------AAGNMKVGFD-----ISGNP 731
+ L L L +N+LT++ L+ +L K G ++ + GNP
Sbjct: 337 EELVKLYLGSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALHGNP 396
Query: 732 WICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLLAV 860
W CD L L+ WL D++ T+CAGP L+GQ + A+
Sbjct: 397 WQCDCHLAYLFNWLQQYTDRL-LNIQTYCAGPAYLKGQVVPAL 438
Score = 99.8 bits (247), Expect = 3e-21
Identities = 76/249 (30%), Positives = 109/249 (43%), Gaps = 25/249 (10%)
Frame = +3
Query: 12 RERPPCPLGAQKENREFF----NLTQMPADI---------------------LQGIPNLQ 116
R PCP+G +E F L +P DI PNL
Sbjct: 17 RPAQPCPMGCDCFVQEVFCSDEELATVPLDIPPYTKNIIFVETSFTTLETRAFGSNPNLT 76
Query: 117 ELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDIL 296
++ N QL +P+L+ L++T ++ L +F +L L L N L+ L
Sbjct: 77 KVVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNIFSNLTSLGKLTLNFNMLEAL 136
Query: 297 DASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLE 476
+ L AL L L GNQL+ LPR+L T L L+L N L LP +L L+
Sbjct: 137 PEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQ 196
Query: 477 WLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSV 656
L L N L L +G L+ LFL++N ++ L F L L+ L L N++T +
Sbjct: 197 TLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHL 256
Query: 657 PEGLWASLG 683
P ++ASLG
Sbjct: 257 PLSIFASLG 265
>ref|NP_570843.2| leucine-rich repeat-containing protein 15 isoform b [Homo sapiens].
Length = 581
Score = 121 bits (303), Expect = 1e-27
Identities = 84/271 (30%), Positives = 122/271 (45%)
Frame = +3
Query: 48 ENREFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLP 227
ENR LT +P G+ NLQEL L NQ+ LS L+ L L+ N + +LP
Sbjct: 206 ENR----LTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLP 261
Query: 228 PGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHI 407
P +F L+ L L N L L + LR L L N + +LP + +N L +
Sbjct: 262 PSVFMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQV 321
Query: 408 LDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA 587
L L NQ+ + P G +L L L N LQ L+ L+ + L NN+L L
Sbjct: 322 LILSRNQISFISPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLP 381
Query: 588 AGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYR 767
F + L + L NN L ++P G++ LGK + NPW CD + L
Sbjct: 382 GNIFANVNGLMAIQLQNNQLENLPLGIFDHLGKLC-----ELRLYDNPWRCDSDILPLRN 436
Query: 768 WLVANEDKMFFQNNTHCAGPKALEGQTLLAV 860
WL+ N+ ++ C P + GQ+L+ +
Sbjct: 437 WLLLNQPRLGTDTVPVCFSPANVRGQSLIII 467
Score = 92.8 bits (229), Expect = 4e-19
Identities = 65/191 (34%), Positives = 93/191 (48%)
Frame = +3
Query: 108 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 287
NL+EL L N LE + + L L+L +N+L + P +F+ L L L ENRL
Sbjct: 150 NLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRL 209
Query: 288 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 467
+ GL L+ L L NQ+ L L N +L L L NN + LPP +
Sbjct: 210 TDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLP 269
Query: 468 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 647
+L L L GN L+ L G P P LR L+L +N +++L F L+ L +L LS N +
Sbjct: 270 QLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQI 329
Query: 648 TSVPEGLWASL 680
+ + G + L
Sbjct: 330 SFISPGAFNGL 340
Score = 78.2 bits (191), Expect = 1e-14
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 2/221 (0%)
Frame = +3
Query: 24 PCPLGAQKENREFFN--LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLD 197
P PL + + N +T++ I L L + N+L ++ + L+ L
Sbjct: 48 PTPLPWNAMSLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLS 107
Query: 198 LTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRK 377
L N L+ LP GLF+ +L +L+L N+L + + L+ L L GN L +P
Sbjct: 108 LANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDG 167
Query: 378 LLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLF 557
+ L L+LG N L + P + + L+ L L NRL + G L+ L
Sbjct: 168 AFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELA 227
Query: 558 LNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
L N++ L+ G F L L LSNN ++ +P ++ L
Sbjct: 228 LQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQL 268
Score = 77.0 bits (188), Expect = 2e-14
Identities = 54/204 (26%), Positives = 97/204 (47%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
L+++ + + +L+ L L+NN+L+ L + L+ L L+ N L ++ P F
Sbjct: 89 LSRITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQC 148
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
+ L L L N L+ + L L L+L N L + ++ + +L +L L N+
Sbjct: 149 SNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENR 208
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
L +P G + L+ L L+ N++ +L G L+ L+L+NN ++ L F L
Sbjct: 209 LTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQL 268
Query: 609 QVLDMLDLSNNSLTSVPEGLWASL 680
L+ L L NSL + G++ +
Sbjct: 269 PQLNRLTLFGNSLKELSPGIFGPM 292
Score = 59.7 bits (143), Expect = 4e-09
Identities = 44/141 (31%), Positives = 65/141 (46%)
Frame = +3
Query: 261 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 440
+L + + L+ S + AL L + N+L + N L L L NN+LQ L
Sbjct: 57 SLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVL 116
Query: 441 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 620
P L +G LE L L N+L ++ + L+ L L+ N L + GAF L L
Sbjct: 117 PIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLT 176
Query: 621 MLDLSNNSLTSVPEGLWASLG 683
L+L NSLT + ++ LG
Sbjct: 177 KLNLGKNSLTHISPRVFQHLG 197
>ref|NP_001128529.2| leucine-rich repeat-containing protein 15 isoform a [Homo sapiens].
Length = 587
Score = 121 bits (303), Expect = 1e-27
Identities = 84/271 (30%), Positives = 122/271 (45%)
Frame = +3
Query: 48 ENREFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLP 227
ENR LT +P G+ NLQEL L NQ+ LS L+ L L+ N + +LP
Sbjct: 212 ENR----LTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLP 267
Query: 228 PGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHI 407
P +F L+ L L N L L + LR L L N + +LP + +N L +
Sbjct: 268 PSVFMQLPQLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQV 327
Query: 408 LDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA 587
L L NQ+ + P G +L L L N LQ L+ L+ + L NN+L L
Sbjct: 328 LILSRNQISFISPGAFNGLTELRELSLHTNALQDLDGNVFRMLANLQNISLQNNRLRQLP 387
Query: 588 AGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYR 767
F + L + L NN L ++P G++ LGK + NPW CD + L
Sbjct: 388 GNIFANVNGLMAIQLQNNQLENLPLGIFDHLGKLC-----ELRLYDNPWRCDSDILPLRN 442
Query: 768 WLVANEDKMFFQNNTHCAGPKALEGQTLLAV 860
WL+ N+ ++ C P + GQ+L+ +
Sbjct: 443 WLLLNQPRLGTDTVPVCFSPANVRGQSLIII 473
Score = 92.8 bits (229), Expect = 4e-19
Identities = 65/191 (34%), Positives = 93/191 (48%)
Frame = +3
Query: 108 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 287
NL+EL L N LE + + L L+L +N+L + P +F+ L L L ENRL
Sbjct: 156 NLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRL 215
Query: 288 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 467
+ GL L+ L L NQ+ L L N +L L L NN + LPP +
Sbjct: 216 TDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQLP 275
Query: 468 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 647
+L L L GN L+ L G P P LR L+L +N +++L F L+ L +L LS N +
Sbjct: 276 QLNRLTLFGNSLKELSPGIFGPMPNLRELWLYDNHISSLPDNVFSNLRQLQVLILSRNQI 335
Query: 648 TSVPEGLWASL 680
+ + G + L
Sbjct: 336 SFISPGAFNGL 346
Score = 78.2 bits (191), Expect = 1e-14
Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 2/221 (0%)
Frame = +3
Query: 24 PCPLGAQKENREFFN--LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLD 197
P PL + + N +T++ I L L + N+L ++ + L+ L
Sbjct: 54 PTPLPWNAMSLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLS 113
Query: 198 LTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRK 377
L N L+ LP GLF+ +L +L+L N+L + + L+ L L GN L +P
Sbjct: 114 LANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDG 173
Query: 378 LLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLF 557
+ L L+LG N L + P + + L+ L L NRL + G L+ L
Sbjct: 174 AFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENRLTDIPMGTFDGLVNLQELA 233
Query: 558 LNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
L N++ L+ G F L L LSNN ++ +P ++ L
Sbjct: 234 LQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQL 274
Score = 77.0 bits (188), Expect = 2e-14
Identities = 54/204 (26%), Positives = 97/204 (47%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
L+++ + + +L+ L L+NN+L+ L + L+ L L+ N L ++ P F
Sbjct: 95 LSRITPGAFRNLGSLRYLSLANNKLQVLPIGLFQGLDSLESLLLSSNQLLQIQPAHFSQC 154
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
+ L L L N L+ + L L L+L N L + ++ + +L +L L N+
Sbjct: 155 SNLKELQLHGNHLEYIPDGAFDHLVGLTKLNLGKNSLTHISPRVFQHLGNLQVLRLYENR 214
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
L +P G + L+ L L+ N++ +L G L+ L+L+NN ++ L F L
Sbjct: 215 LTDIPMGTFDGLVNLQELALQQNQIGLLSPGLFHNNHNLQRLYLSNNHISQLPPSVFMQL 274
Query: 609 QVLDMLDLSNNSLTSVPEGLWASL 680
L+ L L NSL + G++ +
Sbjct: 275 PQLNRLTLFGNSLKELSPGIFGPM 298
Score = 59.7 bits (143), Expect = 4e-09
Identities = 44/141 (31%), Positives = 65/141 (46%)
Frame = +3
Query: 261 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 440
+L + + L+ S + AL L + N+L + N L L L NN+LQ L
Sbjct: 63 SLQILNTHITELNESPFLNISALIALRIEKNELSRITPGAFRNLGSLRYLSLANNKLQVL 122
Query: 441 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 620
P L +G LE L L N+L ++ + L+ L L+ N L + GAF L L
Sbjct: 123 PIGLFQGLDSLESLLLSSNQLLQIQPAHFSQCSNLKELQLHGNHLEYIPDGAFDHLVGLT 182
Query: 621 MLDLSNNSLTSVPEGLWASLG 683
L+L NSLT + ++ LG
Sbjct: 183 KLNLGKNSLTHISPRVFQHLG 203
>ref|NP_612490.1| chondroadherin-like protein precursor [Homo sapiens].
Length = 762
Score = 117 bits (292), Expect = 2e-26
Identities = 93/271 (34%), Positives = 134/271 (49%), Gaps = 2/271 (0%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
+ ++ A L G+ L L+LS+NQL LSA L P+L L L RN ++P +
Sbjct: 461 IAELEAGALAGLGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLERNRFLQVPGAALRAL 520
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
+L +L L++N +D L L +ALR + LSGN++ + L +L L L NQ
Sbjct: 521 PSLFSLHLQDNAVDRLAPGDLGRTRALRWVYLSGNRITEVSLGALGPARELEKLHLDRNQ 580
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPK-LRYLFLNNNKLTTLAAGAFRG 605
L+ +P L G L L L GN L+ L +G P + L++LFLN++ L + GAF G
Sbjct: 581 LREVPTGALEGLPALLELQLSGNPLRALRDGAFQPVGRSLQHLFLNSSGLEQICPGAFSG 640
Query: 606 L-QVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVAN 782
L L L L N L ++P SL + D+S NP+ CD +L L+RWL
Sbjct: 641 LGPGLQSLHLQKNQLRALP--ALPSLSQLE-----LIDLSSNPFHCDCQLLPLHRWLTG- 692
Query: 783 EDKMFFQNNTHCAGPKALEGQTLLAVAASLE 875
+ + CA P GQ + A AA E
Sbjct: 693 ---LNLRVGATCATPPNARGQRVKAAAAVFE 720
Score = 97.4 bits (241), Expect = 2e-20
Identities = 84/255 (32%), Positives = 116/255 (45%)
Frame = +3
Query: 96 QGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLK 275
+G+ L L+L++N L +L + L + L+ L+L NAL+ L PG F AL TL L
Sbjct: 107 RGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLA 166
Query: 276 ENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLL 455
N L L A +GL +R L LS N L L + LA L L L +N+LQ LP +L
Sbjct: 167 HNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGPVL 226
Query: 456 RGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLS 635
L L L N L E P LR L L+ L L AF L LDL
Sbjct: 227 SQARGLARLELGHNPLTYAGEEDGLALPGLRELLLDGGALQALGPRAFAHCPRLHTLDLR 286
Query: 636 NNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTH 815
N L ++P + G ++ + GNP C + L WL + +++
Sbjct: 287 GNQLDTLPP------LQGPGQLR-RLRLQGNPLWCGCQARPLLEWLA----RARVRSDGA 335
Query: 816 CAGPKALEGQTLLAV 860
C GP+ L G+ L A+
Sbjct: 336 CQGPRRLRGEALDAL 350
Score = 70.1 bits (170), Expect = 3e-12
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Frame = +3
Query: 174 VPQL-KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSG 350
+P+L + LDL N LK +P F+ L L L+ ++++ RGL L L+L+
Sbjct: 60 IPELTQRLDLQGNLLKVIPAAAFQGVPHLTHLDLRHCEVELVAEGAFRGLGRLLLLNLAS 119
Query: 351 NQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLA 530
N LR LP++ L L L+L N L+ L P L L+L N L L
Sbjct: 120 NHLRELPQEALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLAHNALVYLPAMAFQ 179
Query: 531 PQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVP 659
++R+L L++N L+ LA A GL L L L +N L ++P
Sbjct: 180 GLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALP 222
>ref|NP_000164.5| platelet glycoprotein Ib alpha chain precursor [Homo sapiens].
Length = 652
Score = 114 bits (284), Expect = 2e-25
Identities = 86/244 (35%), Positives = 122/244 (50%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
NLT +P D+ + + LHLS N L S L+P +L L+L R L +L
Sbjct: 37 NLTALPPDLPK---DTTILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQ------ 87
Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
+D + L L LDLS NQL++LP L L +LD+ N
Sbjct: 88 ----------------VDGT----LPVLGTLDLSHNQLQSLPL-LGQTLPALTVLDVSFN 126
Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
+L +LP LRG +L+ L+L+GN L+ L G L P PKL L L NN LT L AG G
Sbjct: 127 RLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNG 186
Query: 606 LQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANE 785
L+ LD L L NSL ++P+G + S ++ + GNPW+C+ ++ RWL N
Sbjct: 187 LENLDTLLLQENSLYTIPKGFFGS------HLLPFAFLHGNPWLCNCEILYFRRWLQDNA 240
Query: 786 DKMF 797
+ ++
Sbjct: 241 ENVY 244
Score = 60.5 bits (145), Expect = 2e-09
Identities = 33/76 (43%), Positives = 43/76 (56%)
Frame = +3
Query: 60 FFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLF 239
F LT +P L+G+ LQEL+L N+L+ L L P P+L+ L L N L LP GL
Sbjct: 125 FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLL 184
Query: 240 KVSAALHTLVLKENRL 287
L TL+L+EN L
Sbjct: 185 NGLENLDTLLLQENSL 200
>ref|NP_079269.4| leucine-rich repeat transmembrane neuronal protein 4 isoform b
[Homo sapiens].
Length = 518
Score = 105 bits (261), Expect = 7e-23
Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 27/286 (9%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
++ + D QGI L+EL LS+N++ L K PVP L+ LDL+ N L+ L FK
Sbjct: 97 ISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFK-- 154
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
GL+ L L L N L+T+P ++ + +L LDLG N+
Sbjct: 155 ----------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNR 192
Query: 429 LQTLPPDLLRGPLKLEWLHLE------------------------GNRLQVLEEGFLAPQ 536
L++L + G LKL+ LHLE NR++ + +G
Sbjct: 193 LRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTW 252
Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASLGKAAGNMKV 707
L L L+ N + + G F+ L L L+L +N LT++ + W SL +
Sbjct: 253 SSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL--------I 304
Query: 708 GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
+SGN W C + + L+ WL K ++ CAGPK ++G+
Sbjct: 305 SITLSGNMWECSRSICPLFYWL--KNFKGNKESTMICAGPKHIQGE 348
>ref|NP_001128217.1| leucine-rich repeat transmembrane neuronal protein 4 isoform a
[Homo sapiens].
Length = 590
Score = 105 bits (261), Expect = 7e-23
Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 27/286 (9%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
++ + D QGI L+EL LS+N++ L K PVP L+ LDL+ N L+ L FK
Sbjct: 97 ISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFK-- 154
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
GL+ L L L N L+T+P ++ + +L LDLG N+
Sbjct: 155 ----------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNR 192
Query: 429 LQTLPPDLLRGPLKLEWLHLE------------------------GNRLQVLEEGFLAPQ 536
L++L + G LKL+ LHLE NR++ + +G
Sbjct: 193 LRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTW 252
Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASLGKAAGNMKV 707
L L L+ N + + G F+ L L L+L +N LT++ + W SL +
Sbjct: 253 SSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL--------I 304
Query: 708 GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
+SGN W C + + L+ WL K ++ CAGPK ++G+
Sbjct: 305 SITLSGNMWECSRSICPLFYWL--KNFKGNKESTMICAGPKHIQGE 348
>ref|NP_001139478.1| insulin-like growth factor-binding protein complex acid labile
subunit isoform 1 precursor [Homo sapiens].
Length = 643
Score = 103 bits (258), Expect = 2e-22
Identities = 71/205 (34%), Positives = 100/205 (48%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
NL+ +P Q + +L L+L QL L + LL + L L L RN L+ L G F
Sbjct: 123 NLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAH 182
Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
+ AL +L L NRL L+ GL +L L+L N L LP L L L N
Sbjct: 183 TPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGN 242
Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
+L L P L G +L L L N L+ ++ P+L+ L+L+ N + +A GAF G
Sbjct: 243 RLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLG 302
Query: 606 LQVLDMLDLSNNSLTSVPEGLWASL 680
L+ L LDLS+N + + E + L
Sbjct: 303 LKALRWLDLSHNRVAGLLEDTFPGL 327
Score = 102 bits (254), Expect = 5e-22
Identities = 69/207 (33%), Positives = 108/207 (52%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
+L +P +G+ +L+EL L+ N+L L + +L+ LDL+RNAL+ + +F
Sbjct: 219 SLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQ 278
Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
L L L N + + GLKALR LDLS N++ L L +L L +N
Sbjct: 279 LPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHN 338
Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
+ +L P + LE L L NR++ L E +L L L++N+L + AGAF G
Sbjct: 339 AIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLG 398
Query: 606 LQVLDMLDLSNNSLTSVPEGLWASLGK 686
L + +++LS N L ++PE ++ LGK
Sbjct: 399 LTNVAVMNLSGNCLRNLPEQVFRGLGK 425
Score = 99.0 bits (245), Expect = 5e-21
Identities = 85/284 (29%), Positives = 124/284 (43%), Gaps = 23/284 (8%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
+ Q+ +G+ L+ L L +NQL+++ A L + + V++L+ N L+ LP +F+
Sbjct: 364 IRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGL 423
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
LH+L L+ + L + GL LR L L N L + + L +L LDL +NQ
Sbjct: 424 GKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQ 483
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
L LP L +G KLE+L L NRL L L P + +L +++N+L L L
Sbjct: 484 LTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPL 543
Query: 609 QVLDMLDLSNNSL---TSVPEG---LWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRW 770
L L L NNSL T P G LW + GNPW C L L +
Sbjct: 544 GRLRYLSLRNNSLRTFTPQPPGLERLW---------------LEGNPWDCGCPLKALRDF 588
Query: 771 LVAN-----------------EDKMFFQNNTHCAGPKALEGQTL 851
+ N + + NN CA P + G L
Sbjct: 589 ALQNPSAVPRFVQAICEGDDCQPPAYTYNNITCASPPEVVGLDL 632
Score = 98.6 bits (244), Expect = 7e-21
Identities = 67/196 (34%), Positives = 100/196 (51%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
L + L G+ NL LHL NQL L+ P L L L+ N L RL GLF+
Sbjct: 148 LGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGL 207
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
+L L L N L +L + RGL +LR L L+GN+L L L + +L LDL N
Sbjct: 208 GSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNA 267
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
L+ + ++ +L+ L+L+ N + + G LR+L L++N++ L F GL
Sbjct: 268 LRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGL 327
Query: 609 QVLDMLDLSNNSLTSV 656
L +L LS+N++ S+
Sbjct: 328 LGLRVLRLSHNAIASL 343
Score = 91.7 bits (226), Expect = 8e-19
Identities = 68/196 (34%), Positives = 96/196 (48%)
Frame = +3
Query: 99 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 278
G+ L+ L LS+N++ L + L+VL L+ NA+ L P FK L L L
Sbjct: 302 GLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGH 361
Query: 279 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 458
NR+ L GL L L L NQL+ + T++ +++L N L+ LP + R
Sbjct: 362 NRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFR 421
Query: 459 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 638
G KL LHLEG+ L + LR LFL +N L + + GL L LDL++
Sbjct: 422 GLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTS 481
Query: 639 NSLTSVPEGLWASLGK 686
N LT +P L+ LGK
Sbjct: 482 NQLTHLPHRLFQGLGK 497
Score = 76.6 bits (187), Expect = 3e-14
Identities = 59/165 (35%), Positives = 79/165 (47%)
Frame = +3
Query: 186 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 365
+ L L N L +PP F+ ++L L L+ +L L+ L GL+ L HL L NQLR+
Sbjct: 115 QALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRS 174
Query: 366 LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKL 545
L A+ L L L NN+L L L G L L+L N L VL + L
Sbjct: 175 LALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSL 234
Query: 546 RYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
R L L N+L L F GL L LDLS N+L ++ ++ L
Sbjct: 235 RELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQL 279
Score = 70.9 bits (172), Expect = 2e-12
Identities = 46/114 (40%), Positives = 60/114 (52%)
Frame = +3
Query: 342 LSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEG 521
L GN L ++P N + L L+L QL +L P L G L LHLE N+L+ L G
Sbjct: 119 LDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALG 178
Query: 522 FLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLG 683
A P L L L+NN+L+ L G F GL L L+L NSL +P+ + LG
Sbjct: 179 TFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLG 232
Score = 62.4 bits (150), Expect = 5e-10
Identities = 57/169 (33%), Positives = 75/169 (44%)
Frame = +3
Query: 180 QLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQL 359
+L V +RN L RLP G V L L N L + + + L +L L+L G QL
Sbjct: 93 ELSVFCSSRN-LTRLPDG---VPGGTQALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQL 148
Query: 360 RTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 539
+L + L +L L L NQL++L L L L NRL LE+G
Sbjct: 149 GSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLG 208
Query: 540 KLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 686
L L L N L L AFRGL L L L+ N L + L++ L +
Sbjct: 209 SLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAE 257
>ref|NP_004961.1| insulin-like growth factor-binding protein complex acid labile
subunit isoform 2 precursor [Homo sapiens].
Length = 605
Score = 103 bits (258), Expect = 2e-22
Identities = 71/205 (34%), Positives = 100/205 (48%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
NL+ +P Q + +L L+L QL L + LL + L L L RN L+ L G F
Sbjct: 85 NLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAH 144
Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
+ AL +L L NRL L+ GL +L L+L N L LP L L L N
Sbjct: 145 TPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGN 204
Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
+L L P L G +L L L N L+ ++ P+L+ L+L+ N + +A GAF G
Sbjct: 205 RLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLG 264
Query: 606 LQVLDMLDLSNNSLTSVPEGLWASL 680
L+ L LDLS+N + + E + L
Sbjct: 265 LKALRWLDLSHNRVAGLLEDTFPGL 289
Score = 102 bits (254), Expect = 5e-22
Identities = 69/207 (33%), Positives = 108/207 (52%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
+L +P +G+ +L+EL L+ N+L L + +L+ LDL+RNAL+ + +F
Sbjct: 181 SLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQ 240
Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
L L L N + + GLKALR LDLS N++ L L +L L +N
Sbjct: 241 LPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHN 300
Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
+ +L P + LE L L NR++ L E +L L L++N+L + AGAF G
Sbjct: 301 AIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLG 360
Query: 606 LQVLDMLDLSNNSLTSVPEGLWASLGK 686
L + +++LS N L ++PE ++ LGK
Sbjct: 361 LTNVAVMNLSGNCLRNLPEQVFRGLGK 387
Score = 99.0 bits (245), Expect = 5e-21
Identities = 85/284 (29%), Positives = 124/284 (43%), Gaps = 23/284 (8%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
+ Q+ +G+ L+ L L +NQL+++ A L + + V++L+ N L+ LP +F+
Sbjct: 326 IRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGL 385
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
LH+L L+ + L + GL LR L L N L + + L +L LDL +NQ
Sbjct: 386 GKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQ 445
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
L LP L +G KLE+L L NRL L L P + +L +++N+L L L
Sbjct: 446 LTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPL 505
Query: 609 QVLDMLDLSNNSL---TSVPEG---LWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRW 770
L L L NNSL T P G LW + GNPW C L L +
Sbjct: 506 GRLRYLSLRNNSLRTFTPQPPGLERLW---------------LEGNPWDCGCPLKALRDF 550
Query: 771 LVAN-----------------EDKMFFQNNTHCAGPKALEGQTL 851
+ N + + NN CA P + G L
Sbjct: 551 ALQNPSAVPRFVQAICEGDDCQPPAYTYNNITCASPPEVVGLDL 594
Score = 98.6 bits (244), Expect = 7e-21
Identities = 67/196 (34%), Positives = 100/196 (51%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
L + L G+ NL LHL NQL L+ P L L L+ N L RL GLF+
Sbjct: 110 LGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGL 169
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
+L L L N L +L + RGL +LR L L+GN+L L L + +L LDL N
Sbjct: 170 GSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNA 229
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
L+ + ++ +L+ L+L+ N + + G LR+L L++N++ L F GL
Sbjct: 230 LRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGL 289
Query: 609 QVLDMLDLSNNSLTSV 656
L +L LS+N++ S+
Sbjct: 290 LGLRVLRLSHNAIASL 305
Score = 91.7 bits (226), Expect = 8e-19
Identities = 68/196 (34%), Positives = 96/196 (48%)
Frame = +3
Query: 99 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 278
G+ L+ L LS+N++ L + L+VL L+ NA+ L P FK L L L
Sbjct: 264 GLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGH 323
Query: 279 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 458
NR+ L GL L L L NQL+ + T++ +++L N L+ LP + R
Sbjct: 324 NRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFR 383
Query: 459 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 638
G KL LHLEG+ L + LR LFL +N L + + GL L LDL++
Sbjct: 384 GLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTS 443
Query: 639 NSLTSVPEGLWASLGK 686
N LT +P L+ LGK
Sbjct: 444 NQLTHLPHRLFQGLGK 459
Score = 76.6 bits (187), Expect = 3e-14
Identities = 59/165 (35%), Positives = 79/165 (47%)
Frame = +3
Query: 186 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 365
+ L L N L +PP F+ ++L L L+ +L L+ L GL+ L HL L NQLR+
Sbjct: 77 QALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRS 136
Query: 366 LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKL 545
L A+ L L L NN+L L L G L L+L N L VL + L
Sbjct: 137 LALGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSL 196
Query: 546 RYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
R L L N+L L F GL L LDLS N+L ++ ++ L
Sbjct: 197 RELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQL 241
Score = 70.9 bits (172), Expect = 2e-12
Identities = 46/114 (40%), Positives = 60/114 (52%)
Frame = +3
Query: 342 LSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEG 521
L GN L ++P N + L L+L QL +L P L G L LHLE N+L+ L G
Sbjct: 81 LDGNNLSSVPPAAFQNLSSLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALG 140
Query: 522 FLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLG 683
A P L L L+NN+L+ L G F GL L L+L NSL +P+ + LG
Sbjct: 141 TFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLG 194
Score = 62.4 bits (150), Expect = 5e-10
Identities = 57/169 (33%), Positives = 75/169 (44%)
Frame = +3
Query: 180 QLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQL 359
+L V +RN L RLP G V L L N L + + + L +L L+L G QL
Sbjct: 55 ELSVFCSSRN-LTRLPDG---VPGGTQALWLDGNNLSSVPPAAFQNLSSLGFLNLQGGQL 110
Query: 360 RTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 539
+L + L +L L L NQL++L L L L NRL LE+G
Sbjct: 111 GSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNRLSRLEDGLFEGLG 170
Query: 540 KLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 686
L L L N L L AFRGL L L L+ N L + L++ L +
Sbjct: 171 SLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGLAE 219
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 39,150,833
Number of extensions: 1258363
Number of successful extensions: 10052
Number of sequences better than 1.0e-05: 207
Number of HSP's gapped: 8534
Number of HSP's successfully gapped: 654
Length of query: 300
Length of database: 18,297,164
Length adjustment: 102
Effective length of query: 198
Effective length of database: 14,934,836
Effective search space: 2957097528
Effective search space used: 2957097528
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001978
(900 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_084072.1| leucine-rich alpha-2-glycoprotein [Mus musculus]. 338 3e-93
Alignment gi|NP_082180.2| carboxypeptidase N subunit 2 [Mus musculus]. 123 2e-28
Alignment gi|NP_083249.1| leucine-rich repeat-containing protein 15 precu... 122 5e-28
Alignment gi|NP_001157792.1| chondroadherin-like [Mus musculus]. 119 2e-27
Alignment gi|NP_032366.2| insulin-like growth factor-binding protein comp... 112 3e-25
Alignment gi|NP_032174.2| platelet glycoprotein V precursor [Mus musculus]. 110 2e-24
Alignment gi|NP_848846.3| leucine-rich repeat transmembrane neuronal prot... 105 4e-23
Alignment gi|NP_954693.1| reticulon-4 receptor-like 2 precursor [Mus musc... 101 9e-22
Alignment gi|NP_848793.1| leucine-rich repeat transmembrane neuronal prot... 99 3e-21
Alignment gi|NP_031715.1| chondroadherin precursor [Mus musculus]. 99 4e-21
>ref|NP_084072.1| leucine-rich alpha-2-glycoprotein [Mus musculus].
Length = 342
Score = 338 bits (867), Expect = 3e-93
Identities = 173/269 (64%), Positives = 209/269 (77%)
Frame = +3
Query: 57 EFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 236
EF NLTQ+PA LQG P L+ELHLS+N+L+ LS + L PVP+L+ LDLTRNAL+ LPPGL
Sbjct: 69 EFSNLTQLPAAALQGCPGLRELHLSSNRLQALSPELLAPVPRLRALDLTRNALRSLPPGL 128
Query: 237 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 416
F SA L TLVL+EN+L + A WL+GL AL HLDL+ NQL +LP LLA+ LH LDL
Sbjct: 129 FSTSANLSTLVLRENQLREVSAQWLQGLDALGHLDLAENQLSSLPSGLLASLGALHTLDL 188
Query: 417 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 596
G N L++LP LLRGP +L+ LHLEGNRLQ LE+ LAPQP LR LFLN+N+L +A G+
Sbjct: 189 GYNLLESLPEGLLRGPRRLQRLHLEGNRLQRLEDSLLAPQPFLRVLFLNDNQLVGVATGS 248
Query: 597 FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLV 776
F+GLQ LDMLDLSNNSL+S P GLWA LG+ +M+ GFDIS NPWICD+ L DL RWLV
Sbjct: 249 FQGLQHLDMLDLSNNSLSSTPPGLWAFLGRPTRDMQDGFDISHNPWICDKNLADLCRWLV 308
Query: 777 ANEDKMFFQNNTHCAGPKALEGQTLLAVA 863
AN +KMF QN+T CAGP+A++GQ LL VA
Sbjct: 309 ANRNKMFSQNDTRCAGPEAMKGQRLLDVA 337
Score = 76.6 bits (187), Expect = 2e-14
Identities = 52/135 (38%), Positives = 72/135 (53%)
Frame = +3
Query: 264 LVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLP 443
L ++ + L L A+ L+G LR L LS N+L+ L +LLA L LDL N L++LP
Sbjct: 66 LSVEFSNLTQLPAAALQGCPGLRELHLSSNRLQALSPELLAPVPRLRALDLTRNALRSLP 125
Query: 444 PDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDM 623
P L L L L N+L+ + +L L +L L N+L++L +G L L
Sbjct: 126 PGLFSTSANLSTLVLRENQLREVSAQWLQGLDALGHLDLAENQLSSLPSGLLASLGALHT 185
Query: 624 LDLSNNSLTSVPEGL 668
LDL N L S+PEGL
Sbjct: 186 LDLGYNLLESLPEGL 200
Score = 72.4 bits (176), Expect = 4e-13
Identities = 47/129 (36%), Positives = 67/129 (51%)
Frame = +3
Query: 333 HLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVL 512
HL + + L LP L L L L +N+LQ L P+LL +L L L N L+ L
Sbjct: 65 HLSVEFSNLTQLPAAALQGCPGLRELHLSSNRLQALSPELLAPVPRLRALDLTRNALRSL 124
Query: 513 EEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAA 692
G + L L L N+L ++A +GL L LDL+ N L+S+P GL ASLG A
Sbjct: 125 PPGLFSTSANLSTLVLRENQLREVSAQWLQGLDALGHLDLAENQLSSLPSGLLASLG-AL 183
Query: 693 GNMKVGFDI 719
+ +G+++
Sbjct: 184 HTLDLGYNL 192
>ref|NP_082180.2| carboxypeptidase N subunit 2 [Mus musculus].
Length = 547
Score = 123 bits (309), Expect = 2e-28
Identities = 94/261 (36%), Positives = 123/261 (47%), Gaps = 2/261 (0%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
LTQ+P Q + LQ L LSNN L L L + L+ L L NA+ L P LF
Sbjct: 181 LTQLPKGAFQSLTGLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQL 240
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
+L L L+ N + L S L L L L N LRTLP L A+ L L L NQ
Sbjct: 241 FSLEMLWLQHNAICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQ 300
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
L+T+P +L L L N + L E +L L L++N LT L F L
Sbjct: 301 LETIPEGAFTNLSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNL 360
Query: 609 QVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANED 788
L +L+LS N LT++P G++ + + GNPW CD L L WL +
Sbjct: 361 SRLQLLNLSRNQLTTLPGGIFDT-----NYDLFNLALLGNPWQCDCHLSYLTSWLRLYNN 415
Query: 789 KMFFQNNTH--CAGPKALEGQ 845
++ +NTH CAGP L+GQ
Sbjct: 416 QI---SNTHTFCAGPAYLKGQ 433
Score = 103 bits (256), Expect = 2e-22
Identities = 77/244 (31%), Positives = 110/244 (45%), Gaps = 25/244 (10%)
Frame = +3
Query: 24 PCPLGAQKENREFF----NLTQMPADI---------------------LQGIPNLQELHL 128
PCP+G RE F L +P DI G PNL ++
Sbjct: 21 PCPVGCDCFGREVFCSDEQLADIPPDIPPHITDIVFVETAFTTVRTRAFSGSPNLTKVVF 80
Query: 129 SNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASW 308
N Q+ L +P+L+ L++T + + L +F ++L L L +RL L
Sbjct: 81 LNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDL 140
Query: 309 LRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHL 488
+ L L L GNQLRTLP +L + DL L+L N L LP + L+ L L
Sbjct: 141 FCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKL 200
Query: 489 EGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGL 668
N L L EG L L+ LFL+ N +T L+ F L L+ML L +N++ +P L
Sbjct: 201 SNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSL 260
Query: 669 WASL 680
++SL
Sbjct: 261 FSSL 264
Score = 98.2 bits (243), Expect = 8e-21
Identities = 65/196 (33%), Positives = 97/196 (49%)
Frame = +3
Query: 87 DILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTL 266
D G+P LQ+L ++ + + +LSA + L+ L L + L LP LF L +L
Sbjct: 91 DAFGGLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDFDRLAGLPEDLFCHMDILESL 150
Query: 267 VLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPP 446
L+ N+L L + L+ LR L+L+ N L LP+ + T L +L L NN L LP
Sbjct: 151 QLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLARLPE 210
Query: 447 DLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDML 626
L L+ L L+GN + L + L L+L +N + L F L L L
Sbjct: 211 GALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNLTFL 270
Query: 627 DLSNNSLTSVPEGLWA 674
L +N+L ++PEGL+A
Sbjct: 271 SLKDNALRTLPEGLFA 286
>ref|NP_083249.1| leucine-rich repeat-containing protein 15 precursor [Mus musculus].
Length = 579
Score = 122 bits (305), Expect = 5e-28
Identities = 83/271 (30%), Positives = 122/271 (45%)
Frame = +3
Query: 48 ENREFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLP 227
ENR L+ +P + NLQEL L NQ+ LS L+ L L+ N + LP
Sbjct: 206 ENR----LSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLP 261
Query: 228 PGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHI 407
PG+F L+ L L N L L + LR L L N + +LP ++ L +
Sbjct: 262 PGIFMQLPHLNKLTLFGNSLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQLQV 321
Query: 408 LDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA 587
L L +NQL + P G L L L N LQ L+ LR + L NN+L L
Sbjct: 322 LILSHNQLSYISPGAFNGLTNLRELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQLP 381
Query: 588 AGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYR 767
F + L + L NN+L ++P G++ LG + NPW CD + L+
Sbjct: 382 GSIFANVNGLMTIQLQNNNLENLPLGIFDHLGNLC-----ELRLYDNPWRCDSNILPLHD 436
Query: 768 WLVANEDKMFFQNNTHCAGPKALEGQTLLAV 860
WL+ N ++ C+ P ++ GQ+L+ +
Sbjct: 437 WLILNRARLGTDTLPVCSSPASVRGQSLVII 467
Score = 96.7 bits (239), Expect = 2e-20
Identities = 76/228 (33%), Positives = 101/228 (44%), Gaps = 24/228 (10%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLF--- 239
L +P + Q + NL+ L LSNNQL + LK L L N L+ +P G+F
Sbjct: 113 LKNLPVRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHL 172
Query: 240 ----KVSAA-----------------LHTLVLKENRLDILDASWLRGLKALRHLDLSGNQ 356
K++ L L L ENRL + L L+ L L NQ
Sbjct: 173 VGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQENQ 232
Query: 357 LRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQ 536
+ TL L N +L L L NN + LPP + L L L GN L+ L G P
Sbjct: 233 IGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQLPHLNKLTLFGNSLKELSPGVFGPM 292
Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
P LR L+L NN +T+L AF L L +L LS+N L+ + G + L
Sbjct: 293 PNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSYISPGAFNGL 340
Score = 91.7 bits (226), Expect = 7e-19
Identities = 67/221 (30%), Positives = 102/221 (46%), Gaps = 2/221 (0%)
Frame = +3
Query: 24 PCPLGAQKENREFFN--LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLD 197
P PL + + N +T++P D I L L + N+L ++ + L+ L
Sbjct: 48 PSPLPWNAMSLQILNTHITELPEDKFLNISALIALKMEKNELANIMPGAFRNLGSLRHLS 107
Query: 198 LTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRK 377
L N LK LP LF+ L TL+L N+L + + L+ L L GN L +P
Sbjct: 108 LANNKLKNLPVRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEG 167
Query: 378 LLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLF 557
+ + L L+LGNN L P + + L+ L L NRL + G L+ L
Sbjct: 168 VFDHLVGLTKLNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELA 227
Query: 558 LNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
L N++ TL+ G F + L L LSNN ++ +P G++ L
Sbjct: 228 LQENQIGTLSPGLFHNNRNLQRLYLSNNHISHLPPGIFMQL 268
Score = 80.1 bits (196), Expect = 2e-15
Identities = 55/164 (33%), Positives = 80/164 (48%)
Frame = +3
Query: 192 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 371
L + + LP F +AL L +++N L + R L +LRHL L+ N+L+ LP
Sbjct: 58 LQILNTHITELPEDKFLNISALIALKMEKNELANIMPGAFRNLGSLRHLSLANNKLKNLP 117
Query: 372 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 551
+L + +L L L NNQL + P L+ L L GN L+ + EG L
Sbjct: 118 VRLFQDVNNLETLLLSNNQLVQIQPAQFSQFSNLKELQLYGNNLEYIPEGVFDHLVGLTK 177
Query: 552 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLG 683
L L NN T L+ F+ L L +L L N L+ +P G + +LG
Sbjct: 178 LNLGNNGFTHLSPRVFQHLGNLQVLRLYENRLSDIPMGTFDALG 221
>ref|NP_001157792.1| chondroadherin-like [Mus musculus].
Length = 748
Score = 119 bits (299), Expect = 2e-27
Identities = 94/272 (34%), Positives = 135/272 (49%), Gaps = 2/272 (0%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
+ ++ L G+ L L+LS+NQL LSA L P L L L N R+P +
Sbjct: 460 VAELEPGALAGLDRLLYLYLSHNQLSGLSAAALEGAPNLGYLYLEHNRFLRIPGTALRAL 519
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
L +L L++N +D L L G +ALR L LSGN + + L +L L L N+
Sbjct: 520 PTLVSLHLQDNAVDRLAPGDLAGARALRCLYLSGNHITQVSPGALGPARELEKLHLDRNR 579
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPK-LRYLFLNNNKLTTLAAGAFRG 605
L+ +P L G L+ L L GN L+ L +G P + L+ LFLN++ L ++ AF G
Sbjct: 580 LREVPTGALEGLPALKELQLSGNPLRALPDGAFQPVGRSLQQLFLNSSDLEQISPRAFSG 639
Query: 606 L-QVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVAN 782
L + L L L N L S+P A LG + + D+SGNP+ CD +L L+RWL
Sbjct: 640 LGKGLRSLYLHKNQLQSLP----APLGLSGLEL---VDLSGNPFHCDCQLLPLHRWLTG- 691
Query: 783 EDKMFFQNNTHCAGPKALEGQTLLAVAASLEA 878
+ + CA P ++ GQ + A EA
Sbjct: 692 ---LNLRVGATCATPPSVRGQKVKVAAPVFEA 720
Score = 94.7 bits (234), Expect = 8e-20
Identities = 92/304 (30%), Positives = 122/304 (40%), Gaps = 42/304 (13%)
Frame = +3
Query: 66 NLTQMPADILQGIPNL-QELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFK 242
NLT++P IP L Q L L N L+ L A +P L LDL ++ + G F+
Sbjct: 51 NLTEVP----NTIPELTQRLDLQGNILKVLPAAAFQDLPHLTHLDLRNCQVEMVAEGAFR 106
Query: 243 VSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGN 422
L L L NRL L L GL +LR L+L GN L L L L+L +
Sbjct: 107 GLGRLLLLNLASNRLSTLPQEALDGLGSLRRLELEGNMLEELRPGTFGALGSLTTLNLAH 166
Query: 423 NQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFR 602
N L LP +G L+ WL L N L VL LA P LR L L++N+L L A
Sbjct: 167 NALVYLPAMAFQGLLRTRWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGAALS 226
Query: 603 GLQVLDMLDLSNNSLT----------------SVPEGLWASLGKAA-------------G 695
+ L L+L +N LT ++ G +LG A G
Sbjct: 227 QARSLARLELGHNPLTYTGEEDGLALPGLRELALDHGSLQALGPRAFAHCPRLHTLDLRG 286
Query: 696 NMKVGFD------------ISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALE 839
N + GNP C L WLV + +++ C GP+ L
Sbjct: 287 NQLTTLPPLQVPGQLRRLRLQGNPLWCACHARPLLEWLV----RARVRSDGACRGPRRLR 342
Query: 840 GQTL 851
G+ L
Sbjct: 343 GEAL 346
Score = 60.1 bits (144), Expect = 2e-09
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFK- 242
++TQ+ L L++LHL N+L ++ L +P LK L L+ N L+ LP G F+
Sbjct: 555 HITQVSPGALGPARELEKLHLDRNRLREVPTGALEGLPALKELQLSGNPLRALPDGAFQP 614
Query: 243 VSAALHTLVLKENRLDILDASWLRGL-KALRHLDLSGNQLRTLPRKLLANFTDLHILDLG 419
V +L L L + L+ + GL K LR L L NQL++LP L + L ++DL
Sbjct: 615 VGRSLQQLFLNSSDLEQISPRAFSGLGKGLRSLYLHKNQLQSLPAPL--GLSGLELVDLS 672
Query: 420 NN 425
N
Sbjct: 673 GN 674
>ref|NP_032366.2| insulin-like growth factor-binding protein complex acid labile
subunit precursor [Mus musculus].
Length = 603
Score = 112 bits (281), Expect = 3e-25
Identities = 87/289 (30%), Positives = 135/289 (46%), Gaps = 21/289 (7%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
+ Q+ +G+ L+ L L++NQ+ ++ + + V++L+ N L+ LP +F+
Sbjct: 326 IRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGL 385
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
LH+L L+ + L + GL LR L L N + ++ + LA ++L LDL NQ
Sbjct: 386 GRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQ 445
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
L LP L +G +LE+L L N+L +L E L P + +L L++N+L T A G F L
Sbjct: 446 LTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSSL 505
Query: 609 QVLDMLDLSNNSL-TSVP----EGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWL 773
L L+L NNSL T VP E LW + NPW C L L +
Sbjct: 506 GRLRYLNLRNNSLQTFVPQPGLERLW---------------LDANPWDCSCPLKALRDFA 550
Query: 774 VANE----------------DKMFFQNNTHCAGPKALEGQTLLAVAASL 872
+ N ++ NN CAGP + G L ++ +L
Sbjct: 551 LQNPGVVPRFVQTVCEGDDCQPVYTYNNITCAGPANVSGLDLRDISETL 599
Score = 107 bits (268), Expect = 1e-23
Identities = 71/207 (34%), Positives = 109/207 (52%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
+L +P + QG+ NL EL L+ N+L L L + +L+ LDL+RNAL+ + +F
Sbjct: 181 SLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIH 240
Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
L L L N + + G+KALR LDLS N++ L LH+L L +N
Sbjct: 241 LPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAHN 300
Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
+ +L P + LE L L NR++ L E +L L LN+N++ + GAF G
Sbjct: 301 AITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFG 360
Query: 606 LQVLDMLDLSNNSLTSVPEGLWASLGK 686
L + +++LS N L S+PE ++ LG+
Sbjct: 361 LFNVAVMNLSGNCLRSLPEHVFQGLGR 387
Score = 104 bits (260), Expect = 8e-23
Identities = 71/205 (34%), Positives = 106/205 (51%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
NL+ +P+ Q + +L L+L + L L + LL + L L L RN L+ L GLF+
Sbjct: 85 NLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLAAGLFRH 144
Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
+ +L +L L N L L+ RGL L L+L N L LP + +LH L L N
Sbjct: 145 TPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGN 204
Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
+L L P LL G +L L L N L+ ++ P+L+ L+L+ N +T +A AF G
Sbjct: 205 KLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLG 264
Query: 606 LQVLDMLDLSNNSLTSVPEGLWASL 680
++ L LDLS+N + + E + L
Sbjct: 265 MKALRWLDLSHNRVAGLLEDTFPGL 289
Score = 92.0 bits (227), Expect = 5e-19
Identities = 65/196 (33%), Positives = 98/196 (50%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
L + L G+ NL LHL N L L+A P L L L N L RL GLF+
Sbjct: 110 LRSLEPQALLGLQNLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGL 169
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
+ L L L N L +L + +GL L L L+GN+L L LL +L LDL N
Sbjct: 170 SHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNA 229
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
L+++ ++ +L+ L+L+ N + + LR+L L++N++ L F GL
Sbjct: 230 LRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGL 289
Query: 609 QVLDMLDLSNNSLTSV 656
L +L L++N++TS+
Sbjct: 290 LGLHVLRLAHNAITSL 305
Score = 84.7 bits (208), Expect = 9e-17
Identities = 70/245 (28%), Positives = 108/245 (44%), Gaps = 25/245 (10%)
Frame = +3
Query: 27 CPLGAQKENREFFN-LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLT 203
C LG +E N L + A++ +P LQ+L+L N + ++ + L + L+ LDL+
Sbjct: 215 CGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLS 274
Query: 204 RNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLL 383
N + L F LH L L N + L + L L L L N++R L K
Sbjct: 275 HNRVAGLLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTF 334
Query: 384 ANFTDLHILDLGNNQ------------------------LQTLPPDLLRGPLKLEWLHLE 491
L +L L +NQ L++LP + +G +L LHLE
Sbjct: 335 EGLGQLEVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLE 394
Query: 492 GNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLW 671
+ L + A LR LFL +N ++++ + GL L LDL+ N LT +P L+
Sbjct: 395 HSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLF 454
Query: 672 ASLGK 686
LG+
Sbjct: 455 QGLGQ 459
Score = 72.8 bits (177), Expect = 3e-13
Identities = 61/165 (36%), Positives = 77/165 (46%)
Frame = +3
Query: 186 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 365
+ L L N L +P F+ ++L L L+ + L L+ L GL+ L HL L N LR+
Sbjct: 77 RALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRS 136
Query: 366 LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKL 545
L L + L L LGNN L L L RG L L+L N L VL + L
Sbjct: 137 LAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNL 196
Query: 546 RYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
L L NKLT L GL L LDLS N+L SV ++ L
Sbjct: 197 HELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANVFIHL 241
Score = 72.0 bits (175), Expect = 6e-13
Identities = 47/118 (39%), Positives = 60/118 (50%)
Frame = +3
Query: 330 RHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQV 509
R L L GN L ++P N + L L+L + L++L P L G L LHLE N L+
Sbjct: 77 RALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRS 136
Query: 510 LEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLG 683
L G P L L L NN L L G FRGL L L+L NSL +P+ ++ LG
Sbjct: 137 LAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLG 194
Score = 61.2 bits (147), Expect = 1e-09
Identities = 55/169 (32%), Positives = 77/169 (45%)
Frame = +3
Query: 180 QLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQL 359
+L V +RN L +LP + + L L N L + ++ + L +L L+L G+ L
Sbjct: 55 ELSVFCSSRN-LTQLPDS---IPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWL 110
Query: 360 RTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 539
R+L + L +L+ L L N L++L L R L L L N L LEEG
Sbjct: 111 RSLEPQALLGLQNLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLLGRLEEGLFRGLS 170
Query: 540 KLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 686
L L L N L L F+GL L L L+ N LT + L LG+
Sbjct: 171 HLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLGE 219
>ref|NP_032174.2| platelet glycoprotein V precursor [Mus musculus].
Length = 567
Score = 110 bits (274), Expect = 2e-24
Identities = 75/205 (36%), Positives = 104/205 (50%), Gaps = 1/205 (0%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
L + ++ Q + NLQEL L+ NQL L A + +LK+LDL+RN L LP GL
Sbjct: 134 LRDLDQNLFQQLRNLQELGLNQNQLSFLPANLFSSLRELKLLDLSRNNLTHLPKGLLGAQ 193
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
L L+L N+L +D+ L L AL L L N LR++ +L L L N
Sbjct: 194 VKLEKLLLYSNQLTSVDSGLLSNLGALTELRLERNHLRSVAPGAFDRLGNLSSLTLSGNL 253
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
L++LPP L + L L N L+ L + LR L+LN L+TL A AFR L
Sbjct: 254 LESLPPALFLHVSSVSRLTLFENPLEELPDVLFGEMAGLRELWLNGTHLSTLPAAAFRNL 313
Query: 609 QVLDMLDLSNN-SLTSVPEGLWASL 680
L L L+ N L+++P G++ L
Sbjct: 314 SGLQTLGLTRNPRLSALPRGVFQGL 338
Score = 105 bits (261), Expect = 6e-23
Identities = 71/191 (37%), Positives = 98/191 (51%)
Frame = +3
Query: 99 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 278
G+ LQ L LS++ + + + +LK L LTRN + RLP + L L L
Sbjct: 72 GMTVLQRLMLSDSHISAIDPGTFNDLVKLKTLRLTRNKISRLPRAILDKMVLLEQLFLDH 131
Query: 279 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 458
N L LD + + L+ L+ L L+ NQL LP L ++ +L +LDL N L LP LL
Sbjct: 132 NALRDLDQNLFQQLRNLQELGLNQNQLSFLPANLFSSLRELKLLDLSRNNLTHLPKGLLG 191
Query: 459 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 638
+KLE L L N+L ++ G L+ L L L N L ++A GAF L L L LS
Sbjct: 192 AQVKLEKLLLYSNQLTSVDSGLLSNLGALTELRLERNHLRSVAPGAFDRLGNLSSLTLSG 251
Query: 639 NSLTSVPEGLW 671
N L S+P L+
Sbjct: 252 NLLESLPPALF 262
Score = 98.2 bits (243), Expect = 8e-21
Identities = 81/280 (28%), Positives = 122/280 (43%), Gaps = 25/280 (8%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRL------- 224
NLT +P +L L++L L +NQL + + L + L L L RN L+ +
Sbjct: 181 NLTHLPKGLLGAQVKLEKLLLYSNQLTSVDSGLLSNLGALTELRLERNHLRSVAPGAFDR 240
Query: 225 -----------------PPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGN 353
PP LF +++ L L EN L+ L + LR L L+G
Sbjct: 241 LGNLSSLTLSGNLLESLPPALFLHVSSVSRLTLFENPLEELPDVLFGEMAGLRELWLNGT 300
Query: 354 QLRTLPRKLLANFTDLHILDLGNN-QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLA 530
L TLP N + L L L N +L LP + +G +L L L N L L + L
Sbjct: 301 HLSTLPAAAFRNLSGLQTLGLTRNPRLSALPRGVFQGLRELRVLALHTNALAELRDDALR 360
Query: 531 PQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVG 710
LR + L +N+L L FR L L+ + L +N L ++P ++A+L + +
Sbjct: 361 GLGHLRQVSLRHNRLRALPRTLFRNLSSLESVQLEHNQLETLPGDVFAALPQLTQVL--- 417
Query: 711 FDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPK 830
+ NPW+CD L +WL + D + C GP+
Sbjct: 418 --LGHNPWLCDCGLWPFLQWLRHHPDILGRDEPPQCRGPE 455
Score = 77.4 bits (189), Expect = 1e-14
Identities = 62/190 (32%), Positives = 89/190 (46%)
Frame = +3
Query: 111 LQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLD 290
L+ L L+ N++ L L + L+ L L NAL+ L LF+ L L L +N+L
Sbjct: 100 LKTLRLTRNKISRLPRAILDKMVLLEQLFLDHNALRDLDQNLFQQLRNLQELGLNQNQLS 159
Query: 291 ILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLK 470
L A+ L+ L+ LDLS N L LP+ LL L L L +NQL ++ LL
Sbjct: 160 FLPANLFSSLRELKLLDLSRNNLTHLPKGLLGAQVKLEKLLLYSNQLTSVDSGLLSNLGA 219
Query: 471 LEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLT 650
L L LE N L+ + G L L L+ N L +L F + + L L N L
Sbjct: 220 LTELRLERNHLRSVAPGAFDRLGNLSSLTLSGNLLESLPPALFLHVSSVSRLTLFENPLE 279
Query: 651 SVPEGLWASL 680
+P+ L+ +
Sbjct: 280 ELPDVLFGEM 289
>ref|NP_848846.3| leucine-rich repeat transmembrane neuronal protein 4 [Mus
musculus].
Length = 518
Score = 105 bits (263), Expect = 4e-23
Identities = 84/286 (29%), Positives = 128/286 (44%), Gaps = 27/286 (9%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
++ + D QGI L+EL LS+N++ L K PVP L+ LDL+ N L+ L FK
Sbjct: 97 ISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFK-- 154
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
GL+ L L L N L+T+P ++ + +L LDLG N+
Sbjct: 155 ----------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNR 192
Query: 429 LQTLPPDLLRGPLKLEWLHLE------------------------GNRLQVLEEGFLAPQ 536
L++L + G LKL+ LHLE NR++ + +G
Sbjct: 193 LRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSVSQGLTWTW 252
Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASLGKAAGNMKV 707
L L L+ N + + G F+ L L L+L +N LT+V + W SL +
Sbjct: 253 SSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQETVNAWISL--------I 304
Query: 708 GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
+SGN W C + + L+ WL K ++ CAGPK ++G+
Sbjct: 305 SITLSGNMWECSRSICPLFYWL--KNFKGNKESTMICAGPKHIQGE 348
>ref|NP_954693.1| reticulon-4 receptor-like 2 precursor [Mus musculus].
Length = 420
Score = 101 bits (251), Expect = 9e-22
Identities = 84/258 (32%), Positives = 115/258 (44%), Gaps = 3/258 (1%)
Frame = +3
Query: 105 PNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENR 284
P+ Q L L NN + L P L L L N L + PG F+ AL L L +NR
Sbjct: 60 PSTQRLFLQNNLIRSLRPGTF--GPNLLTLWLFSNNLSTIHPGTFRHLQALEELDLGDNR 117
Query: 285 -LDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRG 461
L L+ +GL+ L+ L L QL +LP + L L L N L L DL
Sbjct: 118 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFAD 177
Query: 462 PLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNN 641
L L L GNRL++L E L L L+ N+L + AF GL L +L L NN
Sbjct: 178 LANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNN 237
Query: 642 SLTSVPEGLWASLGKAAGNMKV--GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTH 815
SL S+P G+A ++ ++ NPW CD + L+ W + ++
Sbjct: 238 SLASLP-------GEALADLPALEFLRLNANPWACDCRARPLWAWF---QRARVSSSDVT 287
Query: 816 CAGPKALEGQTLLAVAAS 869
CA P +G+ L A+ S
Sbjct: 288 CATPPERQGRDLRALRDS 305
Score = 72.8 bits (177), Expect = 3e-13
Identities = 53/144 (36%), Positives = 68/144 (47%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
+L + D QG+ LQ LHL QL L + L+ L L N+L L LF
Sbjct: 118 HLRSLEPDTFQGLERLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFAD 177
Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
A L L L NRL +L RGL +L L L GN+L+ + R + L IL L NN
Sbjct: 178 LANLSHLFLHGNRLRLLTEHVFRGLGSLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNN 237
Query: 426 QLQTLPPDLLRGPLKLEWLHLEGN 497
L +LP + L LE+L L N
Sbjct: 238 SLASLPGEALADLPALEFLRLNAN 261
>ref|NP_848793.1| leucine-rich repeat transmembrane neuronal protein 3 precursor [Mus
musculus].
Length = 582
Score = 99.4 bits (246), Expect = 3e-21
Identities = 75/291 (25%), Positives = 132/291 (45%), Gaps = 28/291 (9%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
+L ++ + +G+ L L+L +N + ++ + +LK L L+ N + F+
Sbjct: 72 SLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFLNNTFRP 131
Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
L L L N+L L + RGL+ L L L N LRT+P ++ + +L +LDLG N
Sbjct: 132 VTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLELLDLGYN 191
Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA---AGA 596
++++L ++ G ++L+ LHLE N+ L L+ L++ NK++ + +
Sbjct: 192 RIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRLVSLQNLYMQWNKISVIGQTMSWT 251
Query: 597 FRGLQVLDM----------------------LDLSNNSLTSVPEGL---WASLGKAAGNM 701
+ LQ LD+ L+L +N LT + + + W SL
Sbjct: 252 WSSLQRLDLSGNEIEAFSGPSVFQCVPNLQRLNLDSNKLTFIGQEILDSWISLN------ 305
Query: 702 KVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLL 854
++GN W C + + L WL K +N CA PK L+G ++
Sbjct: 306 --DISLAGNIWECSRNICSLVNWL--RSFKGLRENTIICASPKELQGVNVI 352
Score = 69.3 bits (168), Expect = 4e-12
Identities = 50/163 (30%), Positives = 74/163 (45%)
Frame = +3
Query: 192 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 371
L L N+L++L FK L L L N + +D + G++ L+ L LS N++
Sbjct: 66 LSLRYNSLQKLKYNQFKGLNQLTWLYLDHNHISNIDENAFNGIRRLKELILSSNRISYFL 125
Query: 372 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 551
T+L LDL NQL +L + RG KL LHL N L+ + L
Sbjct: 126 NNTFRPVTNLRNLDLSYNQLHSLGSEQFRGLRKLLSLHLRSNSLRTIPVRIFQDCRNLEL 185
Query: 552 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
L L N++ +LA F G+ L L L +N + + L+ L
Sbjct: 186 LDLGYNRIRSLARNVFAGMIRLKELHLEHNQFSKLNLALFPRL 228
>ref|NP_031715.1| chondroadherin precursor [Mus musculus].
Length = 358
Score = 99.0 bits (245), Expect = 4e-21
Identities = 81/299 (27%), Positives = 124/299 (41%), Gaps = 46/299 (15%)
Frame = +3
Query: 93 LQGIPNLQE----LHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 260
LQ IP + E L+L N L+A +P L L L ++ + G F+ L
Sbjct: 42 LQKIPKVSETTKLLNLQRNNFPVLAANSFRTMPNLVSLHLQHCNIREVAAGAFRGLKQLI 101
Query: 261 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 440
L L N + +L A L L +L L N++ LPR LL+ +L IL L NN+++ L
Sbjct: 102 YLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIREL 161
Query: 441 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 620
+G L WL+L N L L+ G L L L+ N+L++ + A L+V++
Sbjct: 162 RAGAFQGAKDLRWLYLSENALSSLQPGSLDDVENLAKFHLDKNQLSSYPSAALSKLRVVE 221
Query: 621 MLDLSNNSLTSVPEGLWASLGKAAGNM--------------------------------- 701
L LS+N L S+P+ + S G+ +
Sbjct: 222 ELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDAAFSGVTTLKHVHLDNNRLNQ 281
Query: 702 ---KVGFD------ISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTL 851
FD ++ NPW C +L L RWL A + + C+ P +GQ +
Sbjct: 282 LPSSFPFDNLETLTLTNNPWKCTCQLRGLRRWLEAKASR----PDATCSSPAKFKGQRI 336
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 32,959,015
Number of extensions: 1038618
Number of successful extensions: 7884
Number of sequences better than 1.0e-05: 180
Number of HSP's gapped: 6667
Number of HSP's successfully gapped: 550
Length of query: 300
Length of database: 15,617,559
Length adjustment: 101
Effective length of query: 199
Effective length of database: 12,583,923
Effective search space: 2504200677
Effective search space used: 2504200677
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001978
(900 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003123119.1| PREDICTED: leucine-rich alpha-2-glycoprotein... 549 e-157
Alignment gi|XP_003123120.1| PREDICTED: leucine-rich alpha-2-glycoprotein... 535 e-152
Alignment gi|XP_003358805.1| PREDICTED: leucine-rich repeat-containing pr... 127 8e-30
Alignment gi|XP_003358804.1| PREDICTED: carboxypeptidase N subunit 2 [Sus... 126 1e-29
Alignment gi|NP_001041651.1| insulin-like growth factor-binding protein c... 109 2e-24
Alignment gi|XP_003132649.1| PREDICTED: platelet glycoprotein V-like [Sus... 105 3e-23
Alignment gi|XP_003125026.2| PREDICTED: leucine-rich repeat transmembrane... 105 4e-23
Alignment gi|XP_003125025.2| PREDICTED: leucine-rich repeat transmembrane... 105 4e-23
Alignment gi|XP_003124039.2| PREDICTED: leucine-rich repeat transmembrane... 100 8e-22
Alignment gi|XP_003358145.1| PREDICTED: chondroadherin-like [Sus scrofa]. 100 1e-21
>ref|XP_003123119.1| PREDICTED: leucine-rich alpha-2-glycoprotein-like isoform 1 [Sus
scrofa].
Length = 356
Score = 549 bits (1414), Expect = e-157
Identities = 274/274 (100%), Positives = 274/274 (100%)
Frame = +3
Query: 57 EFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 236
EFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL
Sbjct: 83 EFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGL 142
Query: 237 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 416
FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL
Sbjct: 143 FKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDL 202
Query: 417 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 596
GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA
Sbjct: 203 GNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGA 262
Query: 597 FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLV 776
FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLV
Sbjct: 263 FRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLV 322
Query: 777 ANEDKMFFQNNTHCAGPKALEGQTLLAVAASLEA 878
ANEDKMFFQNNTHCAGPKALEGQTLLAVAASLEA
Sbjct: 323 ANEDKMFFQNNTHCAGPKALEGQTLLAVAASLEA 356
>ref|XP_003123120.1| PREDICTED: leucine-rich alpha-2-glycoprotein-like isoform 2 [Sus
scrofa].
Length = 267
Score = 535 bits (1377), Expect = e-152
Identities = 267/267 (100%), Positives = 267/267 (100%)
Frame = +3
Query: 78 MPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAAL 257
MPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAAL
Sbjct: 1 MPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAAL 60
Query: 258 HTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT 437
HTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT
Sbjct: 61 HTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT 120
Query: 438 LPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVL 617
LPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVL
Sbjct: 121 LPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVL 180
Query: 618 DMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMF 797
DMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMF
Sbjct: 181 DMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMF 240
Query: 798 FQNNTHCAGPKALEGQTLLAVAASLEA 878
FQNNTHCAGPKALEGQTLLAVAASLEA
Sbjct: 241 FQNNTHCAGPKALEGQTLLAVAASLEA 267
Score = 57.0 bits (136), Expect = 1e-08
Identities = 39/107 (36%), Positives = 51/107 (47%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
L +P +L +L L L NNQL+ L L +L+ L L N L+ L G
Sbjct: 94 LRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQ 153
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLAN 389
L L L N+L L A RGL+ L LDLS N L ++P L A+
Sbjct: 154 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWAS 200
>ref|XP_003358805.1| PREDICTED: leucine-rich repeat-containing protein 15-like [Sus
scrofa].
Length = 581
Score = 127 bits (319), Expect = 8e-30
Identities = 84/275 (30%), Positives = 129/275 (46%)
Frame = +3
Query: 48 ENREFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLP 227
ENR L+ +P G+ NLQEL L NQ+ L L+ L L+ N + +LP
Sbjct: 206 ENR----LSDLPMGCFDGLGNLQELALQQNQIGMLPPGLFHNNRNLQRLYLSNNHISQLP 261
Query: 228 PGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHI 407
PG+F L+ L L N L L + LR L L N + +LP + ++ L +
Sbjct: 262 PGIFMQLPQLNRLTLFGNSLKELSPGIFGPMHNLRELWLYDNHITSLPDNVFSSLRQLQV 321
Query: 408 LDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLA 587
L L NQ+ + PD G ++L+ L L N LQ L+ L+ + L NN+L L
Sbjct: 322 LILSRNQISYISPDAFNGLVELQELSLHTNALQELDGNVFRMLTNLQNISLQNNRLRQLP 381
Query: 588 AGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYR 767
F + L + L NN L ++P G++ LGK + NPW CD + L+
Sbjct: 382 GNIFANVNDLMTIQLQNNQLENLPLGIFDHLGKLC-----ELRLYDNPWRCDSDILPLHN 436
Query: 768 WLVANEDKMFFQNNTHCAGPKALEGQTLLAVAASL 872
WL+ N ++ C P ++ GQ+L+ ++ S+
Sbjct: 437 WLLLNRARLGTDTLPVCFSPASVRGQSLIIISISV 471
Score = 95.5 bits (236), Expect = 4e-20
Identities = 68/204 (33%), Positives = 96/204 (47%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
L +P + QG+ NL+ L LS+NQL + LK L L N L+ +P G+F
Sbjct: 113 LQVLPVGLFQGLDNLESLLLSSNQLVQIQPAHFSQFSNLKELQLHGNHLEYIPDGVFDHL 172
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
L L L +N L L + L L+ L L N+L LP +L L L NQ
Sbjct: 173 VGLTKLNLGKNSLTHLSPRVFQRLGNLQVLRLYENRLSDLPMGCFDGLGNLQELALQQNQ 232
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
+ LPP L L+ L+L N + L G P+L L L N L L+ G F +
Sbjct: 233 IGMLPPGLFHNNRNLQRLYLSNNHISQLPPGIFMQLPQLNRLTLFGNSLKELSPGIFGPM 292
Query: 609 QVLDMLDLSNNSLTSVPEGLWASL 680
L L L +N +TS+P+ +++SL
Sbjct: 293 HNLRELWLYDNHITSLPDNVFSSL 316
Score = 82.8 bits (203), Expect = 2e-16
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 2/221 (0%)
Frame = +3
Query: 24 PCPLGAQKENREFFN--LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLD 197
P PL + + N +T++ I L L + N+L + + L+ L
Sbjct: 48 PTPLPWNAMSLQILNTHITELNESPFLNISALIALRIEKNELSHIMPGAFRNLGSLRYLS 107
Query: 198 LTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRK 377
L N L+ LP GLF+ L +L+L N+L + + L+ L L GN L +P
Sbjct: 108 LANNKLQVLPVGLFQGLDNLESLLLSSNQLVQIQPAHFSQFSNLKELQLHGNHLEYIPDG 167
Query: 378 LLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLF 557
+ + L L+LG N L L P + + L+ L L NRL L G L+ L
Sbjct: 168 VFDHLVGLTKLNLGKNSLTHLSPRVFQRLGNLQVLRLYENRLSDLPMGCFDGLGNLQELA 227
Query: 558 LNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
L N++ L G F + L L LSNN ++ +P G++ L
Sbjct: 228 LQQNQIGMLPPGLFHNNRNLQRLYLSNNHISQLPPGIFMQL 268
Score = 77.4 bits (189), Expect = 1e-14
Identities = 57/204 (27%), Positives = 95/204 (46%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
L+ + + + +L+ L L+NN+L+ L + L+ L L+ N L ++ P F
Sbjct: 89 LSHIMPGAFRNLGSLRYLSLANNKLQVLPVGLFQGLDNLESLLLSSNQLVQIQPAHFSQF 148
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
+ L L L N L+ + L L L+L N L L ++ +L +L L N+
Sbjct: 149 SNLKELQLHGNHLEYIPDGVFDHLVGLTKLNLGKNSLTHLSPRVFQRLGNLQVLRLYENR 208
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
L LP G L+ L L+ N++ +L G L+ L+L+NN ++ L G F L
Sbjct: 209 LSDLPMGCFDGLGNLQELALQQNQIGMLPPGLFHNNRNLQRLYLSNNHISQLPPGIFMQL 268
Query: 609 QVLDMLDLSNNSLTSVPEGLWASL 680
L+ L L NSL + G++ +
Sbjct: 269 PQLNRLTLFGNSLKELSPGIFGPM 292
Score = 70.1 bits (170), Expect = 2e-12
Identities = 55/192 (28%), Positives = 81/192 (42%)
Frame = +3
Query: 108 NLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRL 287
N L + N + +L+ L + L L + +N L + PG F
Sbjct: 54 NAMSLQILNTHITELNESPFLNISALIALRIEKNELSHIMPGAF---------------- 97
Query: 288 DILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPL 467
R L +LR+L L+ N+L+ LP L +L L L +NQL + P
Sbjct: 98 --------RNLGSLRYLSLANNKLQVLPVGLFQGLDNLESLLLSSNQLVQIQPAHFSQFS 149
Query: 468 KLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSL 647
L+ L L GN L+ + +G L L L N LT L+ F+ L L +L L N L
Sbjct: 150 NLKELQLHGNHLEYIPDGVFDHLVGLTKLNLGKNSLTHLSPRVFQRLGNLQVLRLYENRL 209
Query: 648 TSVPEGLWASLG 683
+ +P G + LG
Sbjct: 210 SDLPMGCFDGLG 221
>ref|XP_003358804.1| PREDICTED: carboxypeptidase N subunit 2 [Sus scrofa].
Length = 547
Score = 126 bits (317), Expect = 1e-29
Identities = 97/315 (30%), Positives = 137/315 (43%), Gaps = 48/315 (15%)
Frame = +3
Query: 60 FFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLF 239
F L +P + + L+ L L NQL+ L P+ LK L+L +N L +LP LF
Sbjct: 130 FNKLEALPEGLFGHMDALESLQLQGNQLQTLPRHLFQPLRHLKTLNLAQNLLAQLPEELF 189
Query: 240 KVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLG 419
+L TL L N L L L +L+ L L GN + LP ++ A L L L
Sbjct: 190 HPLGSLETLRLSNNVLASLPKGVFGKLSSLQELFLDGNSISELPPEVFAQLPHLEKLWLQ 249
Query: 420 NNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP-------------------- 539
N ++ LPP + L +L+L+GN L++L G A P
Sbjct: 250 RNAIRQLPPAIFSSLGNLTFLNLQGNALKMLPTGLFAHSPGLISLSLSHNQLEMVPEGAF 309
Query: 540 ----KLRYLFLNNNKLTTLAAGAFRG------------------------LQVLDMLDLS 635
L L L++N LT L G FRG L L++L LS
Sbjct: 310 ANLSSLGSLTLSHNALTHLPTGVFRGLDGLVKLYLGYNNLTALHPALFQNLSKLELLSLS 369
Query: 636 NNSLTSVPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTH 815
N LT++PEG++ + + GNPW CD L L+ WL D++ F T+
Sbjct: 370 RNLLTTLPEGIFNT-----NYNLFNLALHGNPWQCDCHLAYLFNWLHQFSDRL-FNIQTY 423
Query: 816 CAGPKALEGQTLLAV 860
CAGP L+GQ + A+
Sbjct: 424 CAGPAYLKGQVVPAL 438
Score = 97.4 bits (241), Expect = 9e-21
Identities = 66/206 (32%), Positives = 96/206 (46%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
+ T + A G PNL ++ N Q+ +P+L+ L++T A L +F
Sbjct: 60 SFTTVGARAFSGSPNLTKVVFLNTQVCHFGPDAFGGLPRLQDLEITGGAFSNLSSNIFSN 119
Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
A+L L N+L+ L + AL L L GNQL+TLPR L L L+L N
Sbjct: 120 LASLVKFTLNFNKLEALPEGLFGHMDALESLQLQGNQLQTLPRHLFQPLRHLKTLNLAQN 179
Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
L LP +L LE L L N L L +G L+ LFL+ N ++ L F
Sbjct: 180 LLAQLPEELFHPLGSLETLRLSNNVLASLPKGVFGKLSSLQELFLDGNSISELPPEVFAQ 239
Query: 606 LQVLDMLDLSNNSLTSVPEGLWASLG 683
L L+ L L N++ +P +++SLG
Sbjct: 240 LPHLEKLWLQRNAIRQLPPAIFSSLG 265
Score = 96.7 bits (239), Expect = 2e-20
Identities = 65/196 (33%), Positives = 93/196 (47%)
Frame = +3
Query: 87 DILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTL 266
D G+P LQ+L ++ +LS+ + L L N L+ LP GLF AL +L
Sbjct: 91 DAFGGLPRLQDLEITGGAFSNLSSNIFSNLASLVKFTLNFNKLEALPEGLFGHMDALESL 150
Query: 267 VLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPP 446
L+ N+L L + L+ L+ L+L+ N L LP +L L L L NN L +LP
Sbjct: 151 QLQGNQLQTLPRHLFQPLRHLKTLNLAQNLLAQLPEELFHPLGSLETLRLSNNVLASLPK 210
Query: 447 DLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDML 626
+ L+ L L+GN + L A P L L+L N + L F L L L
Sbjct: 211 GVFGKLSSLQELFLDGNSISELPPEVFAQLPHLEKLWLQRNAIRQLPPAIFSSLGNLTFL 270
Query: 627 DLSNNSLTSVPEGLWA 674
+L N+L +P GL+A
Sbjct: 271 NLQGNALKMLPTGLFA 286
Score = 72.8 bits (177), Expect = 2e-13
Identities = 64/227 (28%), Positives = 90/227 (39%), Gaps = 4/227 (1%)
Frame = +3
Query: 12 RERPPCPLGAQKENREFF----NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVP 179
R PCP+G E L +P DI P+ ++ + A+ P
Sbjct: 17 RPTQPCPVGCDCFIHEVLCSEEELAAIPRDIP---PHATDIIFVETSFTTVGARAFSGSP 73
Query: 180 QLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQL 359
L + + P F L L + L ++ L +L L+ N+L
Sbjct: 74 NLTKVVFLNTQVCHFGPDAFGGLPRLQDLEITGGAFSNLSSNIFSNLASLVKFTLNFNKL 133
Query: 360 RTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 539
LP L + L L L NQLQTLP L + L+ L+L N L L E P
Sbjct: 134 EALPEGLFGHMDALESLQLQGNQLQTLPRHLFQPLRHLKTLNLAQNLLAQLPEELFHPLG 193
Query: 540 KLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASL 680
L L L+NN L +L G F L L L L NS++ +P ++A L
Sbjct: 194 SLETLRLSNNVLASLPKGVFGKLSSLQELFLDGNSISELPPEVFAQL 240
Score = 67.0 bits (162), Expect = 1e-11
Identities = 52/157 (33%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Frame = +3
Query: 315 GLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEG 494
GL L+ L+++G L + +N L L N+L+ LP L LE L L+G
Sbjct: 95 GLPRLQDLEITGGAFSNLSSNIFSNLASLVKFTLNFNKLEALPEGLFGHMDALESLQLQG 154
Query: 495 NRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWA 674
N+LQ L P L+ L L N L L F L L+ L LSNN L S+P+G++
Sbjct: 155 NQLQTLPRHLFQPLRHLKTLNLAQNLLAQLPEELFHPLGSLETLRLSNNVLASLPKGVFG 214
Query: 675 SLGKAAGNMKVGFDISGNPWICDQKLDDLYR-WLVAN 782
L G IS P +L L + WL N
Sbjct: 215 KLSSLQELFLDGNSISELPPEVFAQLPHLEKLWLQRN 251
>ref|NP_001041651.1| insulin-like growth factor-binding protein complex acid labile
subunit [Sus scrofa].
Length = 606
Score = 109 bits (272), Expect = 2e-24
Identities = 73/207 (35%), Positives = 108/207 (52%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
+L +P G+ NL+EL L+ N+L L + +L+ LDL+RNAL+ + +F
Sbjct: 181 SLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVK 240
Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
L L L N L + G+KALR LDLS N++ L LH+L L +N
Sbjct: 241 LPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLEDTFPGLLGLHVLRLAHN 300
Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
L +L P + LE L L NRL+ L E +L L LN+N++ + AGAF G
Sbjct: 301 ALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLG 360
Query: 606 LQVLDMLDLSNNSLTSVPEGLWASLGK 686
L + +++LS N L ++PE ++ LGK
Sbjct: 361 LFNVAVMNLSGNCLRNLPEQVFRGLGK 387
Score = 105 bits (263), Expect = 3e-23
Identities = 88/285 (30%), Positives = 127/285 (44%), Gaps = 24/285 (8%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
L Q+P +G+ L+ L L++NQ++++ A L + + V++L+ N L+ LP +F+
Sbjct: 326 LRQLPEKAFEGLGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGL 385
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
LH+L L+ + L + GL LR L L N L + + L +L LDL N+
Sbjct: 386 GKLHSLHLEHSCLGRVGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTANR 445
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGL 608
L LP L +G KLE+L L NRL L L P + +L +++N+L L L
Sbjct: 446 LTHLPGRLFQGLGKLEYLLLSRNRLSALPADALGPLQRTFWLDVSHNRLQALPEAVLAPL 505
Query: 609 QVLDMLDLSNNSL-TSVP-----EGLWASLGKAAGNMKVGFDISGNPWICDQKLDDL--- 761
L L L NNSL T VP E LW + GNPW C L L
Sbjct: 506 GQLRYLSLRNNSLRTFVPQPLGLERLW---------------LEGNPWDCGCPLRALRAL 550
Query: 762 -----------YRWLVANED----KMFFQNNTHCAGPKALEGQTL 851
R + +D + NN CA P A+ G L
Sbjct: 551 ALQHPAVVPRFVRAVAEGDDDRQPPAYAYNNITCASPPAVSGLDL 595
Score = 99.0 bits (245), Expect = 3e-21
Identities = 70/202 (34%), Positives = 100/202 (49%)
Frame = +3
Query: 51 NREFFNLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPP 230
N + L + L G+ NL LHL NQL L+A L P L L L N L R+
Sbjct: 104 NLQGSGLASLEPQALLGLQNLYHLHLERNQLRSLAAHTFLHTPGLASLGLHNNLLSRVEE 163
Query: 231 GLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHIL 410
GLF+ L L L N L +L + GL LR L L+GN+L L L +L L
Sbjct: 164 GLFQGLTNLWDLNLGWNSLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGELREL 223
Query: 411 DLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAA 590
DL N L+++ ++ KL+ L+L+ N L + G LR+L L++N++ L
Sbjct: 224 DLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLSHNRVGGLLE 283
Query: 591 GAFRGLQVLDMLDLSNNSLTSV 656
F GL L +L L++N+L S+
Sbjct: 284 DTFPGLLGLHVLRLAHNALASL 305
Score = 88.6 bits (218), Expect = 4e-18
Identities = 78/245 (31%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Frame = +3
Query: 27 CPLGAQKENREFFN-LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLT 203
C LG +E N L + A++ +P LQ+L+L +N L ++ L + L+ LDL+
Sbjct: 215 CGLGELRELDLSRNALRSVKANVFVKLPKLQKLYLDHNLLAAVAPGAFLGMKALRWLDLS 274
Query: 204 RNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLL 383
N + L F LH L L N L L + L L L L N+LR LP K
Sbjct: 275 HNRVGGLLEDTFPGLLGLHVLRLAHNALASLRPRTFKDLHFLEELQLGHNRLRQLPEKAF 334
Query: 384 ANFTDLHILDLGNNQLQ------------------------TLPPDLLRGPLKLEWLHLE 491
L +L L +NQ+Q LP + RG KL LHLE
Sbjct: 335 EGLGQLEVLALNDNQIQEIKAGAFLGLFNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLE 394
Query: 492 GNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLW 671
+ L + A LR LFL +N L + + GL L LDL+ N LT +P L+
Sbjct: 395 HSCLGRVGLHTFAGLSGLRRLFLKDNGLEAIDEQSLWGLAELLELDLTANRLTHLPGRLF 454
Query: 672 ASLGK 686
LGK
Sbjct: 455 QGLGK 459
Score = 76.3 bits (186), Expect = 2e-14
Identities = 61/167 (36%), Positives = 79/167 (47%)
Frame = +3
Query: 186 KVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRT 365
+ L L N +P G F+ ++L L L+ + L L+ L GL+ L HL L NQLR+
Sbjct: 77 RALWLDSNNFSSVPAGAFRNLSSLGFLNLQGSGLASLEPQALLGLQNLYHLHLERNQLRS 136
Query: 366 LPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKL 545
L + L L L NN L + L +G L L+L N L VL + L
Sbjct: 137 LAAHTFLHTPGLASLGLHNNLLSRVEEGLFQGLTNLWDLNLGWNSLAVLPDTAFHGLANL 196
Query: 546 RYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 686
R L L NKLT L F GL L LDLS N+L SV ++ L K
Sbjct: 197 RELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVKLPK 243
Score = 62.8 bits (151), Expect = 3e-10
Identities = 56/169 (33%), Positives = 75/169 (44%)
Frame = +3
Query: 180 QLKVLDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQL 359
+L V +RN L +LP G + A L L N + A R L +L L+L G+ L
Sbjct: 55 ELSVFCSSRN-LTQLPDG---IPDAARALWLDSNNFSSVPAGAFRNLSSLGFLNLQGSGL 110
Query: 360 RTLPRKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQP 539
+L + L +L+ L L NQL++L L L L N L +EEG
Sbjct: 111 ASLEPQALLGLQNLYHLHLERNQLRSLAAHTFLHTPGLASLGLHNNLLSRVEEGLFQGLT 170
Query: 540 KLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 686
L L L N L L AF GL L L L+ N LT + L+ LG+
Sbjct: 171 NLWDLNLGWNSLAVLPDTAFHGLANLRELVLAGNKLTYLQPALFCGLGE 219
>ref|XP_003132649.1| PREDICTED: platelet glycoprotein V-like [Sus scrofa].
Length = 569
Score = 105 bits (263), Expect = 3e-23
Identities = 78/231 (33%), Positives = 106/231 (45%), Gaps = 25/231 (10%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
L + ++ Q + +LQEL L+ NQ L A + LK+LDL+ N L LP GLF
Sbjct: 134 LKSLDQNMFQKLVSLQELFLNQNQFAFLPASLFAHLENLKLLDLSGNNLTHLPKGLFGAQ 193
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
L L+L N+L LD+ L L+AL+ L L N +R++ L L L N+
Sbjct: 194 VKLEKLLLHSNQLVSLDSGLLDSLRALKELQLDSNHIRSVAPGAFDRLRSLSSLTLARNR 253
Query: 429 LQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAG----- 593
L+ LP L L +L L N L+ L E L+ L+LN +L TL A
Sbjct: 254 LEGLPSALFLHSRSLTFLTLFENPLEELPEVLFGEMGGLQELWLNGTQLLTLPAAVFRNL 313
Query: 594 --------------------AFRGLQVLDMLDLSNNSLTSVPEGLWASLGK 686
AFRGL L +L LS+N L S+P GL LG+
Sbjct: 314 SGLWVLRVTLSPRLSALPEDAFRGLGELRVLALSSNGLASLPAGLLRGLGR 364
Score = 101 bits (252), Expect = 5e-22
Identities = 93/311 (29%), Positives = 131/311 (42%), Gaps = 30/311 (9%)
Frame = +3
Query: 24 PCPLGAQKENREFF-----NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLK 188
P L A EN + NLT +P + L++L L +NQL L + L + LK
Sbjct: 162 PASLFAHLENLKLLDLSGNNLTHLPKGLFGAQVKLEKLLLHSNQLVSLDSGLLDSLRALK 221
Query: 189 VLD------------------------LTRNALKRLPPGLFKVSAALHTLVLKENRLDIL 296
L L RN L+ LP LF S +L L L EN L+ L
Sbjct: 222 ELQLDSNHIRSVAPGAFDRLRSLSSLTLARNRLEGLPSALFLHSRSLTFLTLFENPLEEL 281
Query: 297 DASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLG-NNQLQTLPPDLLRGPLKL 473
+ L+ L L+G QL TLP + N + L +L + + +L LP D RG +L
Sbjct: 282 PEVLFGEMGGLQELWLNGTQLLTLPAAVFRNLSGLWVLRVTLSPRLSALPEDAFRGLGEL 341
Query: 474 EWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTS 653
L L N L L G L +LR++ L N+L TL F L L + L +N L +
Sbjct: 342 RVLALSSNGLASLPAGLLRGLGRLRHVSLRRNRLRTLPRALFHNLSSLAEVQLDHNQLET 401
Query: 654 VPEGLWASLGKAAGNMKVGFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKA 833
+P ++ L + A + + NPW CD L WL + + C GP+
Sbjct: 402 LPGDMFEGLPQLAEVL-----LGHNPWRCDCGLRPFLAWLRQHAALVGRAEPPLCHGPRP 456
Query: 834 LEGQTLLAVAA 866
G L A+ A
Sbjct: 457 HAGLPLWALPA 467
Score = 101 bits (251), Expect = 6e-22
Identities = 68/191 (35%), Positives = 99/191 (51%)
Frame = +3
Query: 99 GIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALHTLVLKE 278
G+ LQ L LS++ + ++ L + +LK L L+RN + LP L L L L
Sbjct: 72 GMTVLQRLMLSDSHVTAIAPGTLNDLIKLKTLRLSRNKITHLPGALLDKLVLLEQLFLDG 131
Query: 279 NRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTLPPDLLR 458
N L LD + + L +L+ L L+ NQ LP L A+ +L +LDL N L LP L
Sbjct: 132 NELKSLDQNMFQKLVSLQELFLNQNQFAFLPASLFAHLENLKLLDLSGNNLTHLPKGLFG 191
Query: 459 GPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSN 638
+KLE L L N+L L+ G L L+ L L++N + ++A GAF L+ L L L+
Sbjct: 192 AQVKLEKLLLHSNQLVSLDSGLLDSLRALKELQLDSNHIRSVAPGAFDRLRSLSSLTLAR 251
Query: 639 NSLTSVPEGLW 671
N L +P L+
Sbjct: 252 NRLEGLPSALF 262
Score = 85.1 bits (209), Expect = 5e-17
Identities = 66/206 (32%), Positives = 96/206 (46%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
++T + L + L+ L LS N++ L L + L+ L L N LK L +F+
Sbjct: 85 HVTAIAPGTLNDLIKLKTLRLSRNKITHLPGALLDKLVLLEQLFLDGNELKSLDQNMFQK 144
Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
+L L L +N+ L AS L+ L+ LDLSGN L LP+ L L L L +N
Sbjct: 145 LVSLQELFLNQNQFAFLPASLFAHLENLKLLDLSGNNLTHLPKGLFGAQVKLEKLLLHSN 204
Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
QL +L LL L+ L L+ N ++ + G L L L N+L L + F
Sbjct: 205 QLVSLDSGLLDSLRALKELQLDSNHIRSVAPGAFDRLRSLSSLTLARNRLEGLPSALFLH 264
Query: 606 LQVLDMLDLSNNSLTSVPEGLWASLG 683
+ L L L N L +PE L+ +G
Sbjct: 265 SRSLTFLTLFENPLEELPEVLFGEMG 290
Score = 71.2 bits (173), Expect = 7e-13
Identities = 47/140 (33%), Positives = 74/140 (52%)
Frame = +3
Query: 258 HTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQT 437
H L+ + R + + S+ G+ L+ L LS + + + L + L L L N++
Sbjct: 54 HLLLFRMGRGALQNHSF-SGMTVLQRLMLSDSHVTAIAPGTLNDLIKLKTLRLSRNKITH 112
Query: 438 LPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVL 617
LP LL + LE L L+GN L+ L++ L+ LFLN N+ L A F L+ L
Sbjct: 113 LPGALLDKLVLLEQLFLDGNELKSLDQNMFQKLVSLQELFLNQNQFAFLPASLFAHLENL 172
Query: 618 DMLDLSNNSLTSVPEGLWAS 677
+LDLS N+LT +P+GL+ +
Sbjct: 173 KLLDLSGNNLTHLPKGLFGA 192
>ref|XP_003125026.2| PREDICTED: leucine-rich repeat transmembrane neuronal protein 4
isoform 2 [Sus scrofa].
Length = 590
Score = 105 bits (261), Expect = 4e-23
Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 27/286 (9%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
++ + D QGI L+EL LS+N++ L K PVP L+ LDL+ N L+ L FK
Sbjct: 97 ISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRSLDLSYNKLQTLQSEQFK-- 154
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
GL+ L L L N L+T+P ++ + +L LDLG N+
Sbjct: 155 ----------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNR 192
Query: 429 LQTLPPDLLRGPLKLEWLHLE------------------------GNRLQVLEEGFLAPQ 536
L++L + G LKL+ LHLE NR++ + +G
Sbjct: 193 LRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTW 252
Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASLGKAAGNMKV 707
L L L+ N + + G F+ L L L+L +N LT++ + W SL +
Sbjct: 253 SSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL--------I 304
Query: 708 GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
+SGN W C + + L+ WL K ++ CAGPK ++G+
Sbjct: 305 SITLSGNMWECTRSICPLFYWL--KNFKGNKESTMICAGPKHIQGE 348
>ref|XP_003125025.2| PREDICTED: leucine-rich repeat transmembrane neuronal protein 4
isoform 1 [Sus scrofa].
Length = 590
Score = 105 bits (261), Expect = 4e-23
Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 27/286 (9%)
Frame = +3
Query: 69 LTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVS 248
++ + D QGI L+EL LS+N++ L K PVP L+ LDL+ N L+ L FK
Sbjct: 97 ISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRSLDLSYNKLQTLQSEQFK-- 154
Query: 249 AALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQ 428
GL+ L L L N L+T+P ++ + +L LDLG N+
Sbjct: 155 ----------------------GLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNR 192
Query: 429 LQTLPPDLLRGPLKLEWLHLE------------------------GNRLQVLEEGFLAPQ 536
L++L + G LKL+ LHLE NR++ + +G
Sbjct: 193 LRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTW 252
Query: 537 PKLRYLFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSVPE---GLWASLGKAAGNMKV 707
L L L+ N + + G F+ L L L+L +N LT++ + W SL +
Sbjct: 253 SSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISL--------I 304
Query: 708 GFDISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
+SGN W C + + L+ WL K ++ CAGPK ++G+
Sbjct: 305 SITLSGNMWECTRSICPLFYWL--KNFKGNKESTMICAGPKHIQGE 348
>ref|XP_003124039.2| PREDICTED: leucine-rich repeat transmembrane neuronal protein 2
[Sus scrofa].
Length = 516
Score = 100 bits (250), Expect = 8e-22
Identities = 77/282 (27%), Positives = 126/282 (44%), Gaps = 19/282 (6%)
Frame = +3
Query: 66 NLTQMPADILQGIPNLQELHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKV 245
++T++ D L LHL +NQ+ + + +LK L L+ N + LP F
Sbjct: 72 HITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQ 131
Query: 246 SAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNN 425
LH L L N+L L GL+ L+ L L N LRT+P +L + L LDL N
Sbjct: 132 LINLHNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTN 191
Query: 426 QLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRG 605
+L++L + G +KL LHLE N+L + L LFL NK++ L G
Sbjct: 192 RLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWT 251
Query: 606 LQVLDMLDLSNNSLTSVPEGLWASLGK----AAGNMKVG---------------FDISGN 728
L+ LDL+ N + ++ ++ ++ N K+ +SGN
Sbjct: 252 WGTLEKLDLTGNEIKAIDSTVFETMPNLKILLMDNNKLNSLDAKLFNSLTSLTTVGLSGN 311
Query: 729 PWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQTLL 854
W C ++ L WL + + + ++++ C P +G+ +L
Sbjct: 312 LWECSPRICALASWLGSFQGR--WEHSILCHSPDHTQGEDIL 351
Score = 80.1 bits (196), Expect = 2e-15
Identities = 53/155 (34%), Positives = 74/155 (47%)
Frame = +3
Query: 192 LDLTRNALKRLPPGLFKVSAALHTLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLP 371
L L N + L F + L L L N++ + +GL L+ L LS N++ LP
Sbjct: 66 LSLRHNHITELERDQFASFSQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLP 125
Query: 372 RKLLANFTDLHILDLGNNQLQTLPPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRY 551
+LH LDL NQL +L P+L G KL+ LHL N L+ + L +
Sbjct: 126 NTTFTQLINLHNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEF 185
Query: 552 LFLNNNKLTTLAAGAFRGLQVLDMLDLSNNSLTSV 656
L L+ N+L +LA F GL L L L +N LT +
Sbjct: 186 LDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKI 220
>ref|XP_003358145.1| PREDICTED: chondroadherin-like [Sus scrofa].
Length = 359
Score = 100 bits (249), Expect = 1e-21
Identities = 82/297 (27%), Positives = 123/297 (41%), Gaps = 46/297 (15%)
Frame = +3
Query: 93 LQGIPNLQE----LHLSNNQLEDLSAKFLLPVPQLKVLDLTRNALKRLPPGLFKVSAALH 260
LQ IP + E L+L N L+A +P L L L ++ + G F+ L
Sbjct: 43 LQKIPKVSEKTKLLNLQRNNFPVLAANSFRAMPNLVSLHLQHCQIREVASGAFRGLKQLI 102
Query: 261 TLVLKENRLDILDASWLRGLKALRHLDLSGNQLRTLPRKLLANFTDLHILDLGNNQLQTL 440
L L N + +L A L L +L L N++ LPR LL+ +L IL L NN+++ L
Sbjct: 103 YLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIREL 162
Query: 441 PPDLLRGPLKLEWLHLEGNRLQVLEEGFLAPQPKLRYLFLNNNKLTTLAAGAFRGLQVLD 620
+G L WL+L N L L+ G L L +L+ N+L++ + A L+V++
Sbjct: 163 RAGAFQGAKDLRWLYLSENSLSSLQPGSLDDVENLAKFYLDRNQLSSYPSAALSKLRVVE 222
Query: 621 MLDLSNNSLTSVPEGLWASLGKAAGNM--------------------------------- 701
L LS+N L S+P+ + S G+ +
Sbjct: 223 ELKLSHNPLKSIPDHAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLSQ 282
Query: 702 ---KVGFD------ISGNPWICDQKLDDLYRWLVANEDKMFFQNNTHCAGPKALEGQ 845
FD ++ NPW C +L L RWL A + + CA P GQ
Sbjct: 283 LPSNFPFDNLETLTLTNNPWKCTCQLRGLRRWLEAKTSR----PDATCASPAKFRGQ 335
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 24,783,537
Number of extensions: 808283
Number of successful extensions: 6737
Number of sequences better than 1.0e-05: 155
Number of HSP's gapped: 5724
Number of HSP's successfully gapped: 455
Length of query: 300
Length of database: 11,343,932
Length adjustment: 98
Effective length of query: 202
Effective length of database: 8,904,026
Effective search space: 1798613252
Effective search space used: 1798613252
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-001978
(900 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr02 1675 0.0
>Sscrofa_Chr02
|| Length = 162569375
Score = 1675 bits (845), Expect = 0.0
Identities = 845/845 (100%)
Strand = Plus / Plus
Query: 56 agagttcttcaacctgactcagatgcctgctgacatcctccagggcatccctaacctcca 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794145 agagttcttcaacctgactcagatgcctgctgacatcctccagggcatccctaacctcca 74794204
Query: 116 ggaactgcacctttccaacaaccagctggaggacctttcagccaagttcctgctgcctgt 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794205 ggaactgcacctttccaacaaccagctggaggacctttcagccaagttcctgctgcctgt 74794264
Query: 176 gcctcagctaaaggtgctcgatctgacccgcaacgccctgaaacgcctgccccctggcct 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794265 gcctcagctaaaggtgctcgatctgacccgcaacgccctgaaacgcctgccccctggcct 74794324
Query: 236 cttcaaggtctcggctgccctccacaccctggtgctgaaggaaaaccggctagacattct 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794325 cttcaaggtctcggctgccctccacaccctggtgctgaaggaaaaccggctagacattct 74794384
Query: 296 ggacgcctcgtggctacgtggcctgaaagccctcaggcatctggacttgtcagggaacca 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794385 ggacgcctcgtggctacgtggcctgaaagccctcaggcatctggacttgtcagggaacca 74794444
Query: 356 gctccggacactgccccgcaagctgctggccaacttcactgacctgcacatccttgacct 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794445 gctccggacactgccccgcaagctgctggccaacttcactgacctgcacatccttgacct 74794504
Query: 416 tggcaataaccagctgcagactttgccccctgacctcctgaggggccccttgaagttgga 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794505 tggcaataaccagctgcagactttgccccctgacctcctgaggggccccttgaagttgga 74794564
Query: 476 atggctgcaccttgagggcaatagattgcaggtgctcgaagagggctttctggcgcccca 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794565 atggctgcaccttgagggcaatagattgcaggtgctcgaagagggctttctggcgcccca 74794624
Query: 536 gccaaaactgcgctacctttttctaaacaacaacaagctgaccacgctggcagctggtgc 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794625 gccaaaactgcgctacctttttctaaacaacaacaagctgaccacgctggcagctggtgc 74794684
Query: 596 tttccgaggtctgcaggtgctggacatgctggacctctccaacaactcactgaccagtgt 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794685 tttccgaggtctgcaggtgctggacatgctggacctctccaacaactcactgaccagtgt 74794744
Query: 656 tcccgaggggctctgggcatccttgggaaaggctgccggcaacatgaaggttggttttga 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794745 tcccgaggggctctgggcatccttgggaaaggctgccggcaacatgaaggttggttttga 74794804
Query: 716 catctcagggaacccctggatctgtgaccagaaactagatgacctctatcggtggcttgt 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794805 catctcagggaacccctggatctgtgaccagaaactagatgacctctatcggtggcttgt 74794864
Query: 776 ggccaacgaagacaagatgtttttccagaacaacactcactgtgctggccccaaagcctt 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794865 ggccaacgaagacaagatgtttttccagaacaacactcactgtgctggccccaaagcctt 74794924
Query: 836 ggagggccagacgctcctggcagtggctgcgtctcttgaggcctagggctagggttaggg 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74794925 ggagggccagacgctcctggcagtggctgcgtctcttgaggcctagggctagggttaggg 74794984
Query: 896 tgggg 900
|||||
Sbjct: 74794985 tgggg 74794989
Score = 113 bits (57), Expect = 2e-22
Identities = 57/57 (100%)
Strand = Plus / Plus
Query: 1 ctagatggaaaagggagaggccaccatgtcctcttggagcccagaaggaaaacagag 57
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74792902 ctagatggaaaagggagaggccaccatgtcctcttggagcccagaaggaaaacagag 74792958
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 26,707,182
Number of extensions: 173
Number of successful extensions: 173
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 173
Number of HSP's successfully gapped: 2
Length of query: 900
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 879
Effective length of database: 2,808,413,156
Effective search space: 2468595164124
Effective search space used: 2468595164124
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)