Animal-Genome cDNA 20110601C-002120


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002120
         (979 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001116504.1| corticosteroid 11-beta-dehydrogenase isozyme...   398   e-111
Alignment   gi|NP_996852.1| hydroxysteroid 11-beta-dehydrogenase 1-like pro...   196   3e-50
Alignment   gi|NP_001039627.1| dehydrogenase/reductase SDR family member 7 ...    91   2e-18
Alignment   gi|NP_777247.1| dehydrogenase/reductase SDR family member 4 [Bo...    85   8e-17
Alignment   gi|NP_001039751.1| estradiol 17-beta-dehydrogenase 11 [Bos taur...    84   2e-16
Alignment   gi|NP_001030420.1| dehydrogenase/reductase SDR family member 7B...    82   9e-16
Alignment   gi|XP_002702202.1| PREDICTED: dehydrogenase/reductase SDR famil...    82   9e-16
Alignment   gi|NP_001039384.1| 3-ketodihydrosphingosine reductase precursor...    80   2e-15
Alignment   gi|NP_001040081.1| 17-beta-hydroxysteroid dehydrogenase 13 [Bos...    76   5e-14
Alignment   gi|NP_001192862.1| epidermal retinol dehydrogenase 2 [Bos tauru...    70   2e-12

>ref|NP_001116504.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Bos taurus].
          Length = 292

 Score =  398 bits (1023), Expect = e-111
 Identities = 211/278 (75%), Positives = 234/278 (84%)
 Frame = +2

Query: 140 MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH 319
           MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGK+VIVTGASKGIGREMAYHLARMGAH
Sbjct: 1   MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKRVIVTGASKGIGREMAYHLARMGAH 60

Query: 320 VVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH 499
           VVVTARSEE+LKKVVS CLELGA+SAHYVAGTME+MTFAEQFVAKAG+L+GGLDMLILNH
Sbjct: 61  VVVTARSEESLKKVVSRCLELGAASAHYVAGTMENMTFAEQFVAKAGELVGGLDMLILNH 120

Query: 500 ITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV 679
           I +  +  FS+DIHL+RR++EVN LSYVVLS AALPMLKQ+NGSIVVVSS AGK+A PLV
Sbjct: 121 IHYTPLGVFSNDIHLLRRTLEVNLLSYVVLSTAALPMLKQTNGSIVVVSSIAGKIACPLV 180

Query: 680 APYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGNTHVQPSPKEN 859
           A YSASKFALDGFFSS+R EY  TKVNVSITLCILGLIDTDTAM AVAG  + + SPKE 
Sbjct: 181 AAYSASKFALDGFFSSLRMEYEATKVNVSITLCILGLIDTDTAMKAVAGIFNAKASPKEE 240

Query: 860 VPWKLSKGQLCAKRKCIMTAQS*LLSCWEIQGRKILEF 973
              ++ KG    + +    +           GRKI+EF
Sbjct: 241 CALEIIKGGTLRQDEVYYDSSILTPLLLRNPGRKIMEF 278


>ref|NP_996852.1| hydroxysteroid 11-beta-dehydrogenase 1-like protein precursor [Bos
           taurus].
          Length = 287

 Score =  196 bits (497), Expect = 3e-50
 Identities = 110/235 (46%), Positives = 149/235 (63%), Gaps = 1/235 (0%)
 Frame = +2

Query: 149 MKKYLLPILG-IFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVV 325
           MK  LL  LG +F AYY+   ++ F P  L G +V++TG S GIG E+AYH AR+G+H+V
Sbjct: 1   MKVLLLTGLGALFFAYYW---DDNFDPASLHGARVLLTGVSAGIGEELAYHYARLGSHLV 57

Query: 326 VTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHIT 505
           +TA +E  L++VV +C +LGA    Y+A  M      E+ V  A   LGGLD L+LNH+ 
Sbjct: 58  LTAHTEALLQQVVGNCRKLGAPKVFYIAADMASPEVPERVVQFALDKLGGLDYLVLNHLG 117

Query: 506 HASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLVAP 685
            A            R  M++NFLSYV L+ +ALP L  S GS+VVVSS  G++     +P
Sbjct: 118 AAPAGTRVRSSQSTRWLMQMNFLSYVQLTSSALPSLTDSKGSLVVVSSLLGRVPTSFSSP 177

Query: 686 YSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGNTHVQPSP 850
           YSA+KFALD FFSS+R+E  V +VNV+IT+C+LGL D  +A   V G T V+ +P
Sbjct: 178 YSAAKFALDSFFSSLRRELDVQEVNVAITMCVLGLRDRASAAEGVRGITRVRAAP 232


>ref|NP_001039627.1| dehydrogenase/reductase SDR family member 7 [Bos taurus].
          Length = 339

 Score = 90.5 bits (223), Expect = 2e-18
 Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 5/205 (2%)
 Frame = +2

Query: 221 RPEM-LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSA 397
           RPE  L    V VTGAS GIG E+AY L+++G  +V++AR    L++V   CLE G    
Sbjct: 43  RPEWELTDMVVWVTGASSGIGEELAYQLSKLGVSLVLSARRMHELERVKRKCLENGNLKE 102

Query: 398 HYVAGTMEDMT--FAEQFVAKAG-KLLGGLDMLILNHITHASMTPFSDDIHLVRRSMEVN 568
             +     D+T   + +   KA  +  G +D+L+ N             + + +  +E+N
Sbjct: 103 KDILILPLDLTDRSSHEMATKAVLQEFGRIDILVNNGGVSQRALCVDTSLDVFKELIELN 162

Query: 569 FLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKEYS 745
           +L  V L+   LP M+++  G IV V+S  G +A PL   Y ASK AL GFF+++R E +
Sbjct: 163 YLGTVSLTKCVLPHMIERKQGKIVTVNSMVGIIAAPLSTGYCASKHALRGFFNTLRSELA 222

Query: 746 VTKVNVSITLCILGLIDTDTAMTAV 820
            T   ++I+    G + ++    A+
Sbjct: 223 -TYPGITISNICPGPVQSNIVKNAL 246


>ref|NP_777247.1| dehydrogenase/reductase SDR family member 4 [Bos taurus].
          Length = 260

 Score = 85.1 bits (209), Expect = 8e-17
 Identities = 70/201 (34%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
 Frame = +2

Query: 221 RPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSAH 400
           R   L  K  +VT ++ GIG  +A  LA+ GAHVVV++R ++ + + V+     G S   
Sbjct: 8   RRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVTG 67

Query: 401 YV--AGTMEDMTFAEQFVAKAGKLLGGLDMLILNHITHASMTPFSDDI-----HLVRRSM 559
            V   G  ED    E+ VA A KL GG+D+LI N    A+++PF   +      +  + +
Sbjct: 68  TVCHVGKAED---RERLVATAVKLHGGVDILISN----AAVSPFFGSLMDVPEEVWDKIL 120

Query: 560 EVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRK 736
           +VN  +  +L+ A +P M K+  GSIV+VSS A     P + PY+ SK AL G   ++  
Sbjct: 121 DVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLAL 180

Query: 737 EYSVTKVNVSITLCILGLIDT 799
           E  + + NV +     GLI T
Sbjct: 181 E--LAESNVRVNCLAPGLIRT 199


>ref|NP_001039751.1| estradiol 17-beta-dehydrogenase 11 [Bos taurus].
          Length = 316

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 4/211 (1%)
 Frame = +2

Query: 161 LLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARS 340
           LLP L + +           + + + G+ V++TGA  GIGR+ AY  A++   +V+   +
Sbjct: 26  LLPFLLVCIVESLLKLFIPKKRKSVTGEIVLITGAGHGIGRQTAYEFAKLKCKLVLWDIN 85

Query: 341 EETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKL---LGGLDMLILNHITHA 511
           +  L++  + C  LGA +  +V     D +  E   + A K+   +G + +L+ N     
Sbjct: 86  KHGLEETATECKRLGAKAHTFVV----DCSNREDIYSSAKKVKAEVGDVSILVNNAGVVY 141

Query: 512 SMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPY 688
           +   F+     + ++ EVN L++   + A LP M+K ++G IV V+S AG    P +  Y
Sbjct: 142 TSDLFATQDPQIEKTFEVNILAHFWTTKAFLPEMMKNNHGHIVTVASAAGHTGVPFLLAY 201

Query: 689 SASKFALDGFFSSIRKEYSVTKVNVSITLCI 781
            +SKFA  GF  ++ +E S  K     T C+
Sbjct: 202 CSSKFAAVGFHKALTEELSALKRTGVKTTCL 232


>ref|NP_001030420.1| dehydrogenase/reductase SDR family member 7B [Bos taurus].
          Length = 325

 Score = 81.6 bits (200), Expect = 9e-16
 Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 11/210 (5%)
 Frame = +2

Query: 233 LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSA----- 397
           +R   V++TGA+ G+GRE A      GA +V+  R+ E L+++     EL AS A     
Sbjct: 50  VRNAVVVITGATSGLGRECARVFHAAGARLVLCGRNAEALEELSQ---ELAASRAPGVQT 106

Query: 398 HYVAGTMEDMTFAEQFVAKAGKLL---GGLDMLILNH--ITHASMTPFSDDIHLVRRSME 562
           H       D+         A ++L   G +D+LI N       ++   S D+   +R ME
Sbjct: 107 HKPCTVTFDLADPGAIAGAASEILQCFGHVDVLINNAGISYRGAIVDTSPDVD--KRVME 164

Query: 563 VNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKE 739
            N+   V L+ A LP M+++  G +V +SS  GK++ P  + Y+ASK A   FF  +R E
Sbjct: 165 TNYFGPVALTKALLPAMIRRRQGHVVAISSIQGKISLPFRSAYAASKHATQAFFDCLRAE 224

Query: 740 YSVTKVNVSITLCILGLIDTDTAMTAVAGN 829
             V + ++ +T+   G I T+ ++ AV  +
Sbjct: 225 --VEQHDIEVTVISPGYIHTNLSLNAVTAD 252


>ref|XP_002702202.1| PREDICTED: dehydrogenase/reductase SDR family member 7B-like [Bos
           taurus].
          Length = 325

 Score = 81.6 bits (200), Expect = 9e-16
 Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 11/210 (5%)
 Frame = +2

Query: 233 LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSA----- 397
           +R   V++TGA+ G+GRE A      GA +V+  R+ E L+++     EL AS A     
Sbjct: 50  VRNAVVVITGATSGLGRECARVFHAAGARLVLCGRNAEALEELSQ---ELAASRAPEVQT 106

Query: 398 HYVAGTMEDMTFAEQFVAKAGKLL---GGLDMLILNH--ITHASMTPFSDDIHLVRRSME 562
           H       D+         A ++L   G +D+LI N       ++   S D+   +R ME
Sbjct: 107 HKPCTVTFDLADPGAIAGAASEILQCFGHVDVLINNAGISYRGAIVDTSPDVD--KRVME 164

Query: 563 VNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKE 739
            N+   V L+ A LP M+++  G +V +SS  GK++ P  + Y+ASK A   FF  +R E
Sbjct: 165 TNYFGPVALTKALLPAMIRRRQGHVVAISSIQGKISLPFRSAYAASKHATQAFFDCLRAE 224

Query: 740 YSVTKVNVSITLCILGLIDTDTAMTAVAGN 829
             V + ++ +T+   G I T+ ++ AV  +
Sbjct: 225 --VEQHDIEVTVISPGYIHTNLSLNAVTAD 252


>ref|NP_001039384.1| 3-ketodihydrosphingosine reductase precursor [Bos taurus].
          Length = 331

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 6/218 (2%)
 Frame = +2

Query: 170 ILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEET 349
           ++   L  Y  S     +P  L G  V+VTG S GIG+ +A    + GA + + AR+E+ 
Sbjct: 9   LVAFVLLLYMVSPLISPKPLALPGAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDK 68

Query: 350 L----KKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHITHASM 517
           L    K++  H +              +D +  E  + +A + LG +DML+ N    +  
Sbjct: 69  LLQAKKEIEKHSINDKQVVLCISVDVSQDYSQVENVIKQAQEKLGPVDMLV-NCAGMSLS 127

Query: 518 TPFSD-DIHLVRRSMEVNFLSYVVLSVAALPMLKQSN-GSIVVVSSQAGKMANPLVAPYS 691
             F D ++    R M +N+L  V  S A +  +K+   G +V VSSQAG++       YS
Sbjct: 128 GKFEDLEVSTFERLMSINYLGSVYPSRAVIATMKERRMGRVVFVSSQAGQLGLFGYTAYS 187

Query: 692 ASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDT 805
           +SKFAL G   +++ E  V   NV +T+      DTDT
Sbjct: 188 SSKFALRGLAEALQME--VKPYNVYVTVAYPP--DTDT 221


>ref|NP_001040081.1| 17-beta-hydroxysteroid dehydrogenase 13 [Bos taurus].
          Length = 300

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 57/200 (28%), Positives = 104/200 (52%), Gaps = 7/200 (3%)
 Frame = +2

Query: 161 LLPILGIFLAYYYYSANEEFRP---EMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVT 331
           LL +L I +  Y  S  + F P   + + G+ V++TGA  GIGR+ AY  A+  + +V+ 
Sbjct: 7   LLLLLLIIIYSYLESLVKVFIPRRRKSVAGEIVLITGAGHGIGRQTAYEFAKRKSRLVLW 66

Query: 332 ARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQF---VAKAGKLLGGLDMLILNHI 502
             ++  +++  + C +LGA++  +V     D +  E+    V +  K +G + +++ N  
Sbjct: 67  DINKHGVEETAAECRKLGATTHVFVV----DCSNREEIYSSVNQVKKEVGDVTIVVNNAG 122

Query: 503 THASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLV 679
                   S     + ++ EVN L +  ++ A LP M+++++G IV V+S  G    P +
Sbjct: 123 AIYPADLLSTKDEEITKTFEVNILGHFWITKALLPSMIRRNHGHIVTVASVCGHGVIPYL 182

Query: 680 APYSASKFALDGFFSSIRKE 739
            PY +SKFA  GF  ++  E
Sbjct: 183 IPYCSSKFAAVGFHRALTSE 202


>ref|NP_001192862.1| epidermal retinol dehydrogenase 2 [Bos taurus].
          Length = 309

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 55/175 (31%), Positives = 90/175 (51%), Gaps = 3/175 (1%)
 Frame = +2

Query: 239 GKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSAHYVAGTM 418
           G+ V++TGA  G+GR +A   A++G+ +V+   S+E+ ++     +E GA+  +      
Sbjct: 40  GEIVLITGAGSGLGRLLALKFAQLGSVLVLWDISQESNEETCKMAVEAGATRVYAYTCDC 99

Query: 419 EDMTFAEQFVAKAGKLLGGLDMLILNH--ITHASMTPFSDDIHLVRRSMEVNFLSYVVLS 592
                  +   +  K +G   +LI N   +T        D+  L+ +S++VNF S++   
Sbjct: 100 SRKEEIYRVANQVKKEVGDASILINNAGIVTGRKFMDCPDE--LIEKSLDVNFKSHIWTY 157

Query: 593 VAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKEYSVTK 754
            A LP M+  + G +V +SS AG +    +A Y ASKFA  GF  SI  E S TK
Sbjct: 158 KAFLPAMIANNRGHLVCISSSAGLIGMNGLADYCASKFAAYGFAESIFLE-SFTK 211


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 36,310,705
Number of extensions: 1030067
Number of successful extensions: 3401
Number of sequences better than 1.0e-05: 36
Number of HSP's gapped: 3362
Number of HSP's successfully gapped: 36
Length of query: 326
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 224
Effective length of database: 14,306,398
Effective search space: 3204633152
Effective search space used: 3204633152
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002120
         (979 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001005756.1| corticosteroid 11-beta-dehydrogenase isozyme...   404   e-113
Alignment   gi|XP_542145.2| PREDICTED: similar to short-chain dehydrogenase...   188   8e-48
Alignment   gi|XP_868441.1| PREDICTED: similar to short-chain dehydrogenase...   110   2e-24
Alignment   gi|XP_537465.2| PREDICTED: similar to Dehydrogenase/reductase S...    91   2e-18
Alignment   gi|NP_001041699.1| dehydrogenase/reductase SDR family member 4 ...    82   6e-16
Alignment   gi|XP_536670.2| PREDICTED: similar to CG7601-PA [Canis familiar...    82   8e-16
Alignment   gi|XP_535646.2| PREDICTED: similar to alcohol dehydrogenase PAN...    79   9e-15
Alignment   gi|XP_850000.1| PREDICTED: similar to hydroxysteroid (17-beta) ...    79   9e-15
Alignment   gi|XP_544970.2| PREDICTED: similar to dehydrogenase/reductase (...    77   2e-14
Alignment   gi|XP_852048.1| PREDICTED: similar to follicular lymphoma varia...    75   9e-14

>ref|NP_001005756.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Canis lupus
           familiaris].
          Length = 293

 Score =  404 bits (1038), Expect = e-113
 Identities = 216/281 (76%), Positives = 237/281 (84%), Gaps = 1/281 (0%)
 Frame = +2

Query: 140 MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH 319
           MAF KKYL P+LG FLAYYYYSANEEFRPEML+GKKVIVTGASKGIG +MAYHLA+MGAH
Sbjct: 1   MAFKKKYLPPLLGFFLAYYYYSANEEFRPEMLQGKKVIVTGASKGIGEQMAYHLAKMGAH 60

Query: 320 VVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH 499
           VVVTARS+ETLKKVVSHCLELGA+SAHY+ GTMEDMTFAEQFVAKAGKL+GGLDMLILNH
Sbjct: 61  VVVTARSKETLKKVVSHCLELGAASAHYIPGTMEDMTFAEQFVAKAGKLMGGLDMLILNH 120

Query: 500 ITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV 679
           IT+ SM  FS DIHLVRRSMEVNFLSYVVLS AALPMLKQSNGSIVVVSS+AGKM++PLV
Sbjct: 121 ITNTSMNLFSGDIHLVRRSMEVNFLSYVVLSAAALPMLKQSNGSIVVVSSKAGKMSSPLV 180

Query: 680 APYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAG-NTHVQPSPKE 856
           APYSASKFALDGFFSS+R E+SVTKVNVSITLCILGLI+TDTAM AV+G  + V  S KE
Sbjct: 181 APYSASKFALDGFFSSVRMEHSVTKVNVSITLCILGLINTDTAMKAVSGILSTVGASSKE 240

Query: 857 NVPWKLSKGQLCAKRKCIMTAQS*LLSCWEIQGRKILEFLS 979
               ++ KG    + +                GRKILEFLS
Sbjct: 241 ECALEIIKGGALRQEEVYYDNSVWTAFLLGNPGRKILEFLS 281


>ref|XP_542145.2| PREDICTED: similar to short-chain dehydrogenase/reductase 10
           isoform e isoform 1 [Canis familiaris].
          Length = 223

 Score =  188 bits (477), Expect = 8e-48
 Identities = 106/224 (47%), Positives = 139/224 (62%)
 Frame = +2

Query: 149 MKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVV 328
           MK  LL  LG     YY+  N  F P  L+G +V++TGAS G+G E+AYH AR+G+H+V+
Sbjct: 1   MKVLLLTGLGALFFSYYWDDN--FDPASLQGARVLLTGASAGVGEELAYHYARLGSHLVL 58

Query: 329 TARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHITH 508
           TA +E  L+KVV +C +LGA    Y+A  M       + V  A   LGGLD L+LNH+  
Sbjct: 59  TAHTEAFLQKVVGNCRKLGAPEVFYIAADMASPEVPGRVVQFALDKLGGLDYLVLNHLGA 118

Query: 509 ASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLVAPY 688
                 S  I   R  ++VN LSYV L+  ALP L  S GS+VVVSS  G++     +PY
Sbjct: 119 TPAGTRSRSIQGTRWLLQVNLLSYVQLTSLALPSLTDSRGSLVVVSSLLGRVPTSFSSPY 178

Query: 689 SASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAV 820
           SA+KFALDGFF S+R+E  V  VNV+IT+C+LGL D  +A  AV
Sbjct: 179 SAAKFALDGFFGSLRRELDVQDVNVAITMCVLGLRDRASAAEAV 222


>ref|XP_868441.1| PREDICTED: similar to short-chain dehydrogenase/reductase 10
           isoform a isoform 2 [Canis familiaris].
          Length = 142

 Score =  110 bits (275), Expect = 2e-24
 Identities = 60/117 (51%), Positives = 76/117 (64%)
 Frame = +2

Query: 470 GGLDMLILNHITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSS 649
           GGLD L+LNH+        S  I   R  ++VN LSYV L+  ALP L  S GS+VVVSS
Sbjct: 25  GGLDYLVLNHLGATPAGTRSRSIQGTRWLLQVNLLSYVQLTSLALPSLTDSRGSLVVVSS 84

Query: 650 QAGKMANPLVAPYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAV 820
             G++     +PYSA+KFALDGFF S+R+E  V  VNV+IT+C+LGL D  +A  AV
Sbjct: 85  LLGRVPTSFSSPYSAAKFALDGFFGSLRRELDVQDVNVAITMCVLGLRDRASAAEAV 141


>ref|XP_537465.2| PREDICTED: similar to Dehydrogenase/reductase SDR family member 7
           precursor (Retinal short-chain dehydrogenase/reductase
           4) (retSDR4) [Canis familiaris].
          Length = 437

 Score = 90.5 bits (223), Expect = 2e-18
 Identities = 62/178 (34%), Positives = 95/178 (53%), Gaps = 5/178 (2%)
 Frame = +2

Query: 221 RPEMLRGKKVI-VTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSA 397
           RPE      VI VTGAS GIG E+ Y L+++G  +V++AR  + L++V   CLE G    
Sbjct: 141 RPEWELTDMVIWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKE 200

Query: 398 HYVAGTMEDMTFAEQFVAKAGKLL---GGLDMLILNHITHASMTPFSDDIHLVRRSMEVN 568
             +     D+T      A    +L   G +D+L+ N            ++ + +  ME+N
Sbjct: 201 KDIFVLPLDLTDRSSHEAATKAVLQEFGKIDILVNNGGQSQRSLCVDTNLDVFKELMELN 260

Query: 569 FLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKE 739
           +L  V L++  LP M+++  G IV V+S  G ++ PL + Y ASK AL GFF+ +R E
Sbjct: 261 YLGTVSLTMCVLPHMIERKQGKIVTVNSLLGIISAPLSSGYCASKHALRGFFNCLRVE 318


>ref|NP_001041699.1| dehydrogenase/reductase SDR family member 4 [Canis lupus
           familiaris].
          Length = 255

 Score = 82.4 bits (202), Expect = 6e-16
 Identities = 65/201 (32%), Positives = 106/201 (52%), Gaps = 8/201 (3%)
 Frame = +2

Query: 221 RPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSAH 400
           R + L  K  +VT ++ GIG  +A  LAR GAHVVV++R +  + + V+     G S   
Sbjct: 3   RQDPLANKVALVTASTDGIGFAIARRLARDGAHVVVSSRKQHNVDRAVAALQGEGLSVTG 62

Query: 401 YV--AGTMEDMTFAEQFVAKAGKLLGGLDMLILNHITHASMTPFSDDIHLVR-----RSM 559
            V   G  ED    E+ VA A  L GG+D+LI N    A++ PF  ++  V      + +
Sbjct: 63  TVCHVGKAED---RERLVATAVNLHGGIDILISN----AAVNPFFGNLMDVTEEVWDKIL 115

Query: 560 EVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRK 736
           ++N  +  +++ A +P M K+  GS+V+V+S    +  P + PY+ SK AL G   ++ +
Sbjct: 116 DINVKATALMTKAVVPEMEKRGGGSVVIVASIGAYLPFPGLGPYNVSKTALLGLTKNLAR 175

Query: 737 EYSVTKVNVSITLCILGLIDT 799
           E  + + N+ +     GLI T
Sbjct: 176 E--LDQRNIRVNCLAPGLIKT 194


>ref|XP_536670.2| PREDICTED: similar to CG7601-PA [Canis familiaris].
          Length = 325

 Score = 82.0 bits (201), Expect = 8e-16
 Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 9/208 (4%)
 Frame = +2

Query: 233 LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSA----- 397
           LR   V++TGA+ G+GRE A      GA +V+  R+++ L+++     EL AS A     
Sbjct: 50  LRNAVVVITGATSGLGRECARVFYTAGAKLVLCGRNQKALEELTK---ELTASPATKVQT 106

Query: 398 HYVAGTMEDMTFAEQFVAKAGKLL---GGLDMLILNHITHASMTPFSDDIHLVRRSMEVN 568
           H       D+      +A   ++L   G +D+LI N               + ++ ME N
Sbjct: 107 HKPYMVTFDLADPGAIIAATAEILQCFGYVDVLINNAGISYRGAIVDTTTDVDKKVMETN 166

Query: 569 FLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKEYS 745
           +   V L+ A LP M+K+  G IVV+SS  GK++ P  + Y+ASK A   FF  +R E  
Sbjct: 167 YFGPVALTKALLPSMIKRRQGHIVVISSIQGKISIPFRSAYAASKHATQAFFDCLRAE-- 224

Query: 746 VTKVNVSITLCILGLIDTDTAMTAVAGN 829
           + +  + +T+   G I T+ ++ AV  +
Sbjct: 225 MEQYEIEVTVISPGYIHTNLSLNAVTAD 252


>ref|XP_535646.2| PREDICTED: similar to alcohol dehydrogenase PAN1B-like isoform 1
           [Canis familiaris].
          Length = 271

 Score = 78.6 bits (192), Expect = 9e-15
 Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 5/212 (2%)
 Frame = +2

Query: 161 LLPILGIFLAYYYYSANEEF--RPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTA 334
           LL +L I  +Y        F  + + + G+ V++TGA  GIGR  AY  A+  + +V+  
Sbjct: 8   LLLLLTIIYSYLEALVKVFFPRKRKSVAGEIVLITGAGHGIGRWTAYEFAKQKSRLVLWD 67

Query: 335 RSEETLKKVVSHCLELGASSAHYVA--GTMEDMTFAEQFVAKAGKLLGGLDMLILNHITH 508
            ++  +++  + C +LGA+   +V   G  ED+  +   V +  K +G + +L+ N  T 
Sbjct: 68  INKHGVEETAAECRKLGATVHTFVVDCGNREDIYNS---VKQVKKEVGDVTILVNNAGTV 124

Query: 509 ASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAP 685
                 S     + ++ E+N L +  ++ A LP M+K+++G IV V+S  G    P + P
Sbjct: 125 YPADLLSTKDEEITKTFEINILGHFWITKALLPSMIKRNHGHIVTVASVCGHGVIPYLIP 184

Query: 686 YSASKFALDGFFSSIRKEYSVTKVNVSITLCI 781
           Y +SKFA  GF  ++  E     +    T C+
Sbjct: 185 YCSSKFAAVGFHRALTLELQTLGITGIKTSCL 216


>ref|XP_850000.1| PREDICTED: similar to hydroxysteroid (17-beta) dehydrogenase 13
           isoform 2 [Canis familiaris].
          Length = 300

 Score = 78.6 bits (192), Expect = 9e-15
 Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 5/212 (2%)
 Frame = +2

Query: 161 LLPILGIFLAYYYYSANEEF--RPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTA 334
           LL +L I  +Y        F  + + + G+ V++TGA  GIGR  AY  A+  + +V+  
Sbjct: 8   LLLLLTIIYSYLEALVKVFFPRKRKSVAGEIVLITGAGHGIGRWTAYEFAKQKSRLVLWD 67

Query: 335 RSEETLKKVVSHCLELGASSAHYVA--GTMEDMTFAEQFVAKAGKLLGGLDMLILNHITH 508
            ++  +++  + C +LGA+   +V   G  ED+  +   V +  K +G + +L+ N  T 
Sbjct: 68  INKHGVEETAAECRKLGATVHTFVVDCGNREDIYNS---VKQVKKEVGDVTILVNNAGTV 124

Query: 509 ASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAP 685
                 S     + ++ E+N L +  ++ A LP M+K+++G IV V+S  G    P + P
Sbjct: 125 YPADLLSTKDEEITKTFEINILGHFWITKALLPSMIKRNHGHIVTVASVCGHGVIPYLIP 184

Query: 686 YSASKFALDGFFSSIRKEYSVTKVNVSITLCI 781
           Y +SKFA  GF  ++  E     +    T C+
Sbjct: 185 YCSSKFAAVGFHRALTLELQTLGITGIKTSCL 216


>ref|XP_544970.2| PREDICTED: similar to dehydrogenase/reductase (SDR family) member 8
           [Canis familiaris].
          Length = 300

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 4/210 (1%)
 Frame = +2

Query: 164 LPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSE 343
           LP+L IF            + + + G+ V++TGA  GIGR  AY  A++ + +V+   ++
Sbjct: 11  LPLLIIFTLESLLKLFIPKKRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK 70

Query: 344 ETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKL---LGGLDMLILNHITHAS 514
             ++   + C  LGA    +V     D +  E     A K+   +G + +L+ N     +
Sbjct: 71  HGIEDTAAECRRLGAKVHAFVV----DCSNREDIYGSATKVKAEVGDVSILVNNAGVVYT 126

Query: 515 MTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYS 691
              F+     + ++ EVN L++   + A LP M+K ++G IV V+S AG    P +  Y 
Sbjct: 127 SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPVMMKNNHGHIVTVASAAGHTGVPFLLAYC 186

Query: 692 ASKFALDGFFSSIRKEYSVTKVNVSITLCI 781
           +SKFA  GF  ++ +E +  +     T C+
Sbjct: 187 SSKFAAVGFHKALTEELAALERTGVKTTCL 216


>ref|XP_852048.1| PREDICTED: similar to follicular lymphoma variant translocation 1
           [Canis familiaris].
          Length = 509

 Score = 75.1 bits (183), Expect = 9e-14
 Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 6/203 (2%)
 Frame = +2

Query: 158 YLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTAR 337
           Y+L +L  F+  Y +  N   R          VTG S GIG+ +A    + GA + + AR
Sbjct: 120 YVLLLLADFVVNYNHENNSSMRNS--------VTGGSSGIGKCIAIECYKQGAFITLVAR 171

Query: 338 SEETL----KKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHIT 505
           +E+ L    K++  H +              +D +  E  + +A + LG +DML+ N   
Sbjct: 172 NEDKLLQAKKEIEKHSINDKQVVLCISVDVSQDYSQVENVIKQAQEKLGPVDMLV-NCAG 230

Query: 506 HASMTPFSD-DIHLVRRSMEVNFLSYVVLSVAALPMLKQSN-GSIVVVSSQAGKMANPLV 679
            +    F D ++    R M VN+L  V  S A +  +K+   G IV VSSQAG++     
Sbjct: 231 MSLSGKFEDLEVSTFERLMSVNYLGSVYPSRAVITTMKERRVGRIVFVSSQAGQLGLFGF 290

Query: 680 APYSASKFALDGFFSSIRKEYSV 748
             YS+SKFA+ G   +++ E  +
Sbjct: 291 TAYSSSKFAIRGLAEALQMEVEI 313


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 37,607,035
Number of extensions: 1001234
Number of successful extensions: 3470
Number of sequences better than 1.0e-05: 43
Number of HSP's gapped: 3430
Number of HSP's successfully gapped: 44
Length of query: 326
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 223
Effective length of database: 15,440,896
Effective search space: 3443319808
Effective search space used: 3443319808
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002120
         (979 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001193670.1| corticosteroid 11-beta-dehydrogenase isozyme...   411   e-115
Alignment   gi|NP_861420.1| corticosteroid 11-beta-dehydrogenase isozyme 1 ...   411   e-115
Alignment   gi|NP_005516.1| corticosteroid 11-beta-dehydrogenase isozyme 1 ...   411   e-115
Alignment   gi|NP_941995.1| hydroxysteroid 11-beta-dehydrogenase 1-like pro...   199   3e-51
Alignment   gi|NP_940935.1| hydroxysteroid 11-beta-dehydrogenase 1-like pro...   194   1e-49
Alignment   gi|NP_941996.1| hydroxysteroid 11-beta-dehydrogenase 1-like pro...   121   1e-27
Alignment   gi|NP_941994.1| hydroxysteroid 11-beta-dehydrogenase 1-like pro...   119   4e-27
Alignment   gi|NP_941997.1| hydroxysteroid 11-beta-dehydrogenase 1-like pro...   105   8e-23
Alignment   gi|NP_941993.1| hydroxysteroid 11-beta-dehydrogenase 1-like pro...   100   3e-21
Alignment   gi|NP_057113.1| dehydrogenase/reductase SDR family member 7 pre...    91   2e-18

>ref|NP_001193670.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Homo sapiens].
          Length = 292

 Score =  411 bits (1057), Expect = e-115
 Identities = 213/279 (76%), Positives = 241/279 (86%)
 Frame = +2

Query: 140 MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH 319
           MAFMKKYLLPILG+F+AYYYYSANEEFRPEML+GKKVIVTGASKGIGREMAYHLA+MGAH
Sbjct: 1   MAFMKKYLLPILGLFMAYYYYSANEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAH 60

Query: 320 VVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH 499
           VVVTARS+ETL+KVVSHCLELGA+SAHY+AGTMEDMTFAEQFVA+AGKL+GGLDMLILNH
Sbjct: 61  VVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH 120

Query: 500 ITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV 679
           IT+ S+  F DDIH VR+SMEVNFLSYVVL+VAALPMLKQSNGSIVVVSS AGK+A P+V
Sbjct: 121 ITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMV 180

Query: 680 APYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGNTHVQPSPKEN 859
           A YSASKFALDGFFSSIRKEYSV++VNVSITLC+LGLIDT+TAM AV+G  H+Q +PKE 
Sbjct: 181 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEE 240

Query: 860 VPWKLSKGQLCAKRKCIMTAQS*LLSCWEIQGRKILEFL 976
              ++ KG    + +    +            RKILEFL
Sbjct: 241 CALEIIKGGALRQEEVYYDSSLWTTLLIRNPCRKILEFL 279


>ref|NP_861420.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Homo sapiens].
          Length = 292

 Score =  411 bits (1057), Expect = e-115
 Identities = 213/279 (76%), Positives = 241/279 (86%)
 Frame = +2

Query: 140 MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH 319
           MAFMKKYLLPILG+F+AYYYYSANEEFRPEML+GKKVIVTGASKGIGREMAYHLA+MGAH
Sbjct: 1   MAFMKKYLLPILGLFMAYYYYSANEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAH 60

Query: 320 VVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH 499
           VVVTARS+ETL+KVVSHCLELGA+SAHY+AGTMEDMTFAEQFVA+AGKL+GGLDMLILNH
Sbjct: 61  VVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH 120

Query: 500 ITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV 679
           IT+ S+  F DDIH VR+SMEVNFLSYVVL+VAALPMLKQSNGSIVVVSS AGK+A P+V
Sbjct: 121 ITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMV 180

Query: 680 APYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGNTHVQPSPKEN 859
           A YSASKFALDGFFSSIRKEYSV++VNVSITLC+LGLIDT+TAM AV+G  H+Q +PKE 
Sbjct: 181 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEE 240

Query: 860 VPWKLSKGQLCAKRKCIMTAQS*LLSCWEIQGRKILEFL 976
              ++ KG    + +    +            RKILEFL
Sbjct: 241 CALEIIKGGALRQEEVYYDSSLWTTLLIRNPCRKILEFL 279


>ref|NP_005516.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Homo sapiens].
          Length = 292

 Score =  411 bits (1057), Expect = e-115
 Identities = 213/279 (76%), Positives = 241/279 (86%)
 Frame = +2

Query: 140 MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH 319
           MAFMKKYLLPILG+F+AYYYYSANEEFRPEML+GKKVIVTGASKGIGREMAYHLA+MGAH
Sbjct: 1   MAFMKKYLLPILGLFMAYYYYSANEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAH 60

Query: 320 VVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH 499
           VVVTARS+ETL+KVVSHCLELGA+SAHY+AGTMEDMTFAEQFVA+AGKL+GGLDMLILNH
Sbjct: 61  VVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNH 120

Query: 500 ITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV 679
           IT+ S+  F DDIH VR+SMEVNFLSYVVL+VAALPMLKQSNGSIVVVSS AGK+A P+V
Sbjct: 121 ITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMV 180

Query: 680 APYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGNTHVQPSPKEN 859
           A YSASKFALDGFFSSIRKEYSV++VNVSITLC+LGLIDT+TAM AV+G  H+Q +PKE 
Sbjct: 181 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEE 240

Query: 860 VPWKLSKGQLCAKRKCIMTAQS*LLSCWEIQGRKILEFL 976
              ++ KG    + +    +            RKILEFL
Sbjct: 241 CALEIIKGGALRQEEVYYDSSLWTTLLIRNPCRKILEFL 279


>ref|NP_941995.1| hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform b [Homo
           sapiens].
          Length = 286

 Score =  199 bits (506), Expect = 3e-51
 Identities = 112/235 (47%), Positives = 149/235 (63%), Gaps = 1/235 (0%)
 Frame = +2

Query: 149 MKKYLLPILG-IFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVV 325
           MK  LL  LG +F AYY+   ++ F P  L+G +V++TGA+ G+G E+AYH AR+G+H+V
Sbjct: 1   MKVLLLTGLGALFFAYYW---DDNFDPASLQGARVLLTGANAGVGEELAYHYARLGSHLV 57

Query: 326 VTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHIT 505
           +TA +E  L+KVV +C +LGA    Y+A  M      E  V  A   LGGLD L+LNHI 
Sbjct: 58  LTAHTEALLQKVVGNCRKLGAPKVFYIAADMASPEAPESVVQFALDKLGGLDYLVLNHIG 117

Query: 506 HASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLVAP 685
            A     +      R  M+VNF+SYV L+  ALP L  S GS+VVVSS  G++      P
Sbjct: 118 GAPAGTRARSPQATRWLMQVNFVSYVQLTSRALPSLTDSKGSLVVVSSLLGRVPTSFSTP 177

Query: 686 YSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGNTHVQPSP 850
           YSA+KFALDGFF S+R+E  V  VNV+IT+C+LGL D  +A  AV G T V+ +P
Sbjct: 178 YSAAKFALDGFFGSLRRELDVQDVNVAITMCVLGLRDRASAAEAVRGVTRVKAAP 232


>ref|NP_940935.1| hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform e [Homo
           sapiens].
          Length = 315

 Score =  194 bits (493), Expect = 1e-49
 Identities = 110/236 (46%), Positives = 147/236 (62%), Gaps = 1/236 (0%)
 Frame = +2

Query: 149 MKKYLLPILG-IFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVV 325
           MK  LL  LG +F AYY+   ++ F P  L+G +V++TGA+ G+G E+AYH AR+G+H+V
Sbjct: 1   MKVLLLTGLGALFFAYYW---DDNFDPASLQGARVLLTGANAGVGEELAYHYARLGSHLV 57

Query: 326 VTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHIT 505
           +TA +E  L+KVV +C +LGA    Y+A  M      E  V  A   LGGLD L+LNHI 
Sbjct: 58  LTAHTEALLQKVVGNCRKLGAPKVFYIAADMASPEAPESVVQFALDKLGGLDYLVLNHIG 117

Query: 506 HASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLVAP 685
            A     +      R  M+VNF+SYV L+  ALP L  S GS+VVVSS  G++      P
Sbjct: 118 GAPAGTRARSPQATRWLMQVNFVSYVQLTSRALPSLTDSKGSLVVVSSLLGRVPTSFSTP 177

Query: 686 YSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGNTHVQPSPK 853
           YSA+KFALDGFF S+R+E  V  VNV+IT+C+LGL D  +A  AV  +T     P+
Sbjct: 178 YSAAKFALDGFFGSLRRELDVQDVNVAITMCVLGLRDRASAAEAVRSSTSRPRQPE 233


>ref|NP_941996.1| hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform c [Homo
           sapiens].
          Length = 199

 Score =  121 bits (303), Expect = 1e-27
 Identities = 69/138 (50%), Positives = 86/138 (62%)
 Frame = +2

Query: 437 EQFVAKAGKLLGGLDMLILNHITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLK 616
           E  V  A   LGGLD L+LNHI  A     +      R  M+VNF+SYV L+  ALP L 
Sbjct: 8   ESVVQFALDKLGGLDYLVLNHIGGAPAGTRARSPQATRWLMQVNFVSYVQLTSRALPSLT 67

Query: 617 QSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLID 796
            S GS+VVVSS  G++      PYSA+KFALDGFF S+R+E  V  VNV+IT+C+LGL D
Sbjct: 68  DSKGSLVVVSSLLGRVPTSFSTPYSAAKFALDGFFGSLRRELDVQDVNVAITMCVLGLRD 127

Query: 797 TDTAMTAVAGNTHVQPSP 850
             +A  AV G T V+ +P
Sbjct: 128 RASAAEAVRGVTRVKAAP 145


>ref|NP_941994.1| hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform a [Homo
           sapiens].
          Length = 205

 Score =  119 bits (298), Expect = 4e-27
 Identities = 65/127 (51%), Positives = 82/127 (64%)
 Frame = +2

Query: 470 GGLDMLILNHITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSS 649
           GGLD L+LNHI  A     +      R  M+VNF+SYV L+  ALP L  S GS+VVVSS
Sbjct: 25  GGLDYLVLNHIGGAPAGTRARSPQATRWLMQVNFVSYVQLTSRALPSLTDSKGSLVVVSS 84

Query: 650 QAGKMANPLVAPYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGN 829
             G++      PYSA+KFALDGFF S+R+E  V  VNV+IT+C+LGL D  +A  AV G 
Sbjct: 85  LLGRVPTSFSTPYSAAKFALDGFFGSLRRELDVQDVNVAITMCVLGLRDRASAAEAVRGV 144

Query: 830 THVQPSP 850
           T V+ +P
Sbjct: 145 TRVKAAP 151


>ref|NP_941997.1| hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform d [Homo
           sapiens].
          Length = 152

 Score =  105 bits (261), Expect = 8e-23
 Identities = 54/98 (55%), Positives = 69/98 (70%)
 Frame = +2

Query: 557 MEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRK 736
           M+VNF+SYV L+  ALP L  S GS+VVVSS  G++      PYSA+KFALDGFF S+R+
Sbjct: 1   MQVNFVSYVQLTSRALPSLTDSKGSLVVVSSLLGRVPTSFSTPYSAAKFALDGFFGSLRR 60

Query: 737 EYSVTKVNVSITLCILGLIDTDTAMTAVAGNTHVQPSP 850
           E  V  VNV+IT+C+LGL D  +A  AV G T V+ +P
Sbjct: 61  ELDVQDVNVAITMCVLGLRDRASAAEAVRGVTRVKAAP 98


>ref|NP_941993.1| hydroxysteroid 11-beta-dehydrogenase 1-like protein isoform f [Homo
           sapiens].
          Length = 181

 Score =  100 bits (248), Expect = 3e-21
 Identities = 52/99 (52%), Positives = 67/99 (67%)
 Frame = +2

Query: 557 MEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRK 736
           M+VNF+SYV L+  ALP L  S GS+VVVSS  G++      PYSA+KFALDGFF S+R+
Sbjct: 1   MQVNFVSYVQLTSRALPSLTDSKGSLVVVSSLLGRVPTSFSTPYSAAKFALDGFFGSLRR 60

Query: 737 EYSVTKVNVSITLCILGLIDTDTAMTAVAGNTHVQPSPK 853
           E  V  VNV+IT+C+LGL D  +A  AV  +T     P+
Sbjct: 61  ELDVQDVNVAITMCVLGLRDRASAAEAVRSSTSRPRQPE 99


>ref|NP_057113.1| dehydrogenase/reductase SDR family member 7 precursor [Homo
           sapiens].
          Length = 339

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 5/207 (2%)
 Frame = +2

Query: 221 RPEM-LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSA 397
           RPE  L    V VTGAS GIG E+AY L+++G  +V++AR    L++V   CLE G    
Sbjct: 43  RPEWELTDMVVWVTGASSGIGEELAYQLSKLGVSLVLSARRVHELERVKRRCLENGNLKE 102

Query: 398 HYVAGTMEDMTFAEQFVAKAGKLL---GGLDMLILNHITHASMTPFSDDIHLVRRSMEVN 568
             +     D+T      A    +L   G +D+L+ N             + + R+ +E+N
Sbjct: 103 KDILVLPLDLTDTGSHEAATKAVLQEFGRIDILVNNGGMSQRSLCMDTSLDVYRKLIELN 162

Query: 569 FLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKEYS 745
           +L  V L+   LP M+++  G IV V+S  G ++ PL   Y ASK AL GFF+ +R E +
Sbjct: 163 YLGTVSLTKCVLPHMIERKQGKIVTVNSILGIISVPLSIGYCASKHALRGFFNGLRTELA 222

Query: 746 VTKVNVSITLCILGLIDTDTAMTAVAG 826
            T   + ++    G + ++    ++AG
Sbjct: 223 -TYPGIIVSNICPGPVQSNIVENSLAG 248


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 36,828,160
Number of extensions: 974638
Number of successful extensions: 3432
Number of sequences better than 1.0e-05: 56
Number of HSP's gapped: 3376
Number of HSP's successfully gapped: 57
Length of query: 326
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 223
Effective length of database: 14,901,872
Effective search space: 3323117456
Effective search space used: 3323117456
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002120
         (979 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001038216.1| corticosteroid 11-beta-dehydrogenase isozyme...   387   e-108
Alignment   gi|NP_032314.2| corticosteroid 11-beta-dehydrogenase isozyme 1 ...   387   e-108
Alignment   gi|NP_001165583.1| dehydrogenase/reductase SDR family member 7B...    87   2e-17
Alignment   gi|NP_663403.1| dehydrogenase/reductase SDR family member 7B is...    87   2e-17
Alignment   gi|NP_079798.2| dehydrogenase/reductase SDR family member 7 pre...    84   2e-16
Alignment   gi|NP_444492.1| estradiol 17-beta-dehydrogenase 11 [Mus musculu...    79   5e-15
Alignment   gi|NP_081810.1| 3-ketodihydrosphingosine reductase precursor [M...    77   2e-14
Alignment   gi|NP_082066.2| dehydrogenase/reductase member 2 [Mus musculus].      75   6e-14
Alignment   gi|NP_001033027.2| dehydrogenase/reductase SDR family member 4 ...    74   2e-13
Alignment   gi|NP_001156958.1| 17-beta-hydroxysteroid dehydrogenase 13 isof...    72   5e-13

>ref|NP_001038216.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Mus musculus].
          Length = 292

 Score =  387 bits (993), Expect = e-108
 Identities = 199/280 (71%), Positives = 226/280 (80%)
 Frame = +2

Query: 140 MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH 319
           MA MK YLLPIL +FLAYYYYS NEEFRPEML+GKKVIVTGASKGIGREMAYHL++MGAH
Sbjct: 1   MAVMKNYLLPILVLFLAYYYYSTNEEFRPEMLQGKKVIVTGASKGIGREMAYHLSKMGAH 60

Query: 320 VVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH 499
           VV+TARSEE L+KVVS CLELGA+SAHY+AGTMEDMTFAEQF+ KAGKL+GGLDMLILNH
Sbjct: 61  VVLTARSEEGLQKVVSRCLELGAASAHYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILNH 120

Query: 500 ITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV 679
           IT  S++ F DDIH VRR MEVNFLSYVV+S AALPMLKQSNGSI V+SS AGKM  P++
Sbjct: 121 ITQTSLSLFHDDIHSVRRVMEVNFLSYVVMSTAALPMLKQSNGSIAVISSLAGKMTQPMI 180

Query: 680 APYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGNTHVQPSPKEN 859
           APYSASKFALDGFFS+IR E  +TKVNVSITLC+LGLIDT+TAM  ++G  + Q SPKE 
Sbjct: 181 APYSASKFALDGFFSTIRTELYITKVNVSITLCVLGLIDTETAMKEISGIINAQASPKEE 240

Query: 860 VPWKLSKGQLCAKRKCIMTAQS*LLSCWEIQGRKILEFLS 979
              ++ KG    K +                GRKI+EF S
Sbjct: 241 CALEIIKGTALRKSEVYYDKSPLTPILLGNPGRKIMEFFS 280


>ref|NP_032314.2| corticosteroid 11-beta-dehydrogenase isozyme 1 [Mus musculus].
          Length = 292

 Score =  387 bits (993), Expect = e-108
 Identities = 199/280 (71%), Positives = 226/280 (80%)
 Frame = +2

Query: 140 MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH 319
           MA MK YLLPIL +FLAYYYYS NEEFRPEML+GKKVIVTGASKGIGREMAYHL++MGAH
Sbjct: 1   MAVMKNYLLPILVLFLAYYYYSTNEEFRPEMLQGKKVIVTGASKGIGREMAYHLSKMGAH 60

Query: 320 VVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH 499
           VV+TARSEE L+KVVS CLELGA+SAHY+AGTMEDMTFAEQF+ KAGKL+GGLDMLILNH
Sbjct: 61  VVLTARSEEGLQKVVSRCLELGAASAHYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILNH 120

Query: 500 ITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV 679
           IT  S++ F DDIH VRR MEVNFLSYVV+S AALPMLKQSNGSI V+SS AGKM  P++
Sbjct: 121 ITQTSLSLFHDDIHSVRRVMEVNFLSYVVMSTAALPMLKQSNGSIAVISSLAGKMTQPMI 180

Query: 680 APYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGNTHVQPSPKEN 859
           APYSASKFALDGFFS+IR E  +TKVNVSITLC+LGLIDT+TAM  ++G  + Q SPKE 
Sbjct: 181 APYSASKFALDGFFSTIRTELYITKVNVSITLCVLGLIDTETAMKEISGIINAQASPKEE 240

Query: 860 VPWKLSKGQLCAKRKCIMTAQS*LLSCWEIQGRKILEFLS 979
              ++ KG    K +                GRKI+EF S
Sbjct: 241 CALEIIKGTALRKSEVYYDKSPLTPILLGNPGRKIMEFFS 280


>ref|NP_001165583.1| dehydrogenase/reductase SDR family member 7B isoform 1 [Mus
           musculus].
          Length = 314

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 4/203 (1%)
 Frame = +2

Query: 233 LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSAHYVAG 412
           LR   V+VTGA+ G+GRE A      GA +V+  R+ + L+++            H    
Sbjct: 41  LRNAVVVVTGATSGLGRECAKVFHAAGAKLVLCGRNVKALEELSRELAGSSQGQTHQPFV 100

Query: 413 TMEDMTFAEQFVAKAGKLL---GGLDMLILNHITHASMTPFSDDIHLVRRSMEVNFLSYV 583
              D+       A A ++L   G +D+LI N       T     + + R+ ME+N+   V
Sbjct: 101 VTFDLADPGTIAAAAAEILQCFGYVDVLINNAGISYRGTISDTIVDVDRKVMEINYFGPV 160

Query: 584 VLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKEYSVTKVN 760
            L+ A LP M+++  G IV +SS  GK++ P  + YSASK A   FF  +R E  + + N
Sbjct: 161 ALTKALLPSMVERKQGHIVAISSIQGKISIPFRSAYSASKHATQAFFDCLRAE--MEEAN 218

Query: 761 VSITLCILGLIDTDTAMTAVAGN 829
           + +T+   G I T+ ++ AV  +
Sbjct: 219 IKVTVISPGYIHTNLSVNAVTAD 241


>ref|NP_663403.1| dehydrogenase/reductase SDR family member 7B isoform 2 [Mus
           musculus].
          Length = 323

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 4/203 (1%)
 Frame = +2

Query: 233 LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSAHYVAG 412
           LR   V+VTGA+ G+GRE A      GA +V+  R+ + L+++            H    
Sbjct: 50  LRNAVVVVTGATSGLGRECAKVFHAAGAKLVLCGRNVKALEELSRELAGSSQGQTHQPFV 109

Query: 413 TMEDMTFAEQFVAKAGKLL---GGLDMLILNHITHASMTPFSDDIHLVRRSMEVNFLSYV 583
              D+       A A ++L   G +D+LI N       T     + + R+ ME+N+   V
Sbjct: 110 VTFDLADPGTIAAAAAEILQCFGYVDVLINNAGISYRGTISDTIVDVDRKVMEINYFGPV 169

Query: 584 VLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKEYSVTKVN 760
            L+ A LP M+++  G IV +SS  GK++ P  + YSASK A   FF  +R E  + + N
Sbjct: 170 ALTKALLPSMVERKQGHIVAISSIQGKISIPFRSAYSASKHATQAFFDCLRAE--MEEAN 227

Query: 761 VSITLCILGLIDTDTAMTAVAGN 829
           + +T+   G I T+ ++ AV  +
Sbjct: 228 IKVTVISPGYIHTNLSVNAVTAD 250


>ref|NP_079798.2| dehydrogenase/reductase SDR family member 7 precursor [Mus
           musculus].
          Length = 338

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 5/178 (2%)
 Frame = +2

Query: 221 RPEM-LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSA 397
           RPE  L    V VTGAS GIG E+A+ L+++G  +V++AR  + L++V   CLE G    
Sbjct: 43  RPEWELTDMVVWVTGASSGIGEELAFQLSKLGVSLVLSARRAQELERVKRRCLENGNLKE 102

Query: 398 HYVAGTMEDMTFAEQFVAKAGKLL---GGLDMLILNHITHASMTPFSDDIHLVRRSMEVN 568
             +     D+T      A    +L   G +D+L+ N            ++ + +  + +N
Sbjct: 103 KDILVLPLDLTDTSSHEAATKAVLQEFGKIDILVNNGGRSQRSLVLETNLDVFKELINLN 162

Query: 569 FLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKE 739
           ++  V L+   LP M+++  G IV V+S AG  +  L + Y ASK AL GFF+++  E
Sbjct: 163 YIGTVSLTKCVLPHMIERKQGKIVTVNSIAGIASVSLSSGYCASKHALRGFFNALHSE 220


>ref|NP_444492.1| estradiol 17-beta-dehydrogenase 11 [Mus musculus].
          Length = 298

 Score = 79.0 bits (193), Expect = 5e-15
 Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 4/197 (2%)
 Frame = +2

Query: 161 LLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARS 340
           LLP+L +F            + + + G+ V++TGA  GIGR  AY  A++   +V+   +
Sbjct: 10  LLPLLIVFSIESLVKLFIPKKKKSVAGEIVLITGAGHGIGRLTAYEFAKLNTKLVLWDIN 69

Query: 341 EETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKL---LGGLDMLILNHITHA 511
           +  +++  + C +LGA +  +V     D +  E+  + A K+   +G + +L+ N     
Sbjct: 70  KNGIEETAAKCRKLGAQAHPFVV----DCSQREEIYSAAKKVKEEVGDVSILVNNAGVVY 125

Query: 512 SMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPY 688
           +   F+     + ++ EVN L++   + A LP M+K ++G IV V+S AG    P +  Y
Sbjct: 126 TADLFATQDPQIEKTFEVNVLAHFWTTKAFLPVMMKNNHGHIVTVASAAGHTVVPFLLAY 185

Query: 689 SASKFALDGFFSSIRKE 739
            +SKFA  GF  ++  E
Sbjct: 186 CSSKFAAVGFHRALTDE 202


>ref|NP_081810.1| 3-ketodihydrosphingosine reductase precursor [Mus musculus].
          Length = 332

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 67/226 (29%), Positives = 103/226 (45%), Gaps = 5/226 (2%)
 Frame = +2

Query: 170 ILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEET 349
           ++   L  Y  S     +P  L G  V+VTG S GIG+ +A    + GA + + AR+E+ 
Sbjct: 9   LVAFVLLLYMVSPLISPKPLALPGAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDK 68

Query: 350 L----KKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHITHASM 517
           L    K +  H +              +D    E  + +A + LG +DML+    T  S 
Sbjct: 69  LLQAKKDIEKHSINDKQVVLCISVDVSQDYNQVENVIKQAQEKLGPVDMLVNCAGTSMSG 128

Query: 518 TPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSN-GSIVVVSSQAGKMANPLVAPYSA 694
                ++    + M +N+L  V  S A +  +K+   G IV VSSQAG++       YS+
Sbjct: 129 KFEELEVSSFEKLMSINYLGSVYPSRAVITTMKERRVGRIVFVSSQAGQLGLFGFTAYSS 188

Query: 695 SKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGNT 832
           SKFA+ G   +++ E  V   NV +T+      DTDT   A    T
Sbjct: 189 SKFAIRGLAEALQME--VKPYNVYVTVAYPP--DTDTPGLAEENKT 230


>ref|NP_082066.2| dehydrogenase/reductase member 2 [Mus musculus].
          Length = 282

 Score = 75.5 bits (184), Expect = 6e-14
 Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 6/199 (3%)
 Frame = +2

Query: 233 LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSAHYVAG 412
           L GK  ++TG+++GIG  +A  LA+ GAHVV+++R +E + + V+   E G S    V G
Sbjct: 35  LAGKVAVITGSTRGIGFAIARRLAQDGAHVVISSRKQENVDEAVTILKEEGLS----VTG 90

Query: 413 TMEDMTFAE---QFVAKAGKLLGGLDMLI-LNHITHASMTPFSDDIHLVRRSMEVNFLSY 580
           TM  +  AE     V  A K  GG+D L+ +  +     +       +  + ++VN  S 
Sbjct: 91  TMCHVGKAEDRQHLVTTALKHSGGIDFLVCVAGVNPLVGSTLGASEQIWDKILDVNVKSP 150

Query: 581 VVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKEYSVTKV 757
            +L    LP M  +  GS+V+VSS    +  P +  Y+ SK AL G   S+  E +   +
Sbjct: 151 ALLLSKVLPYMENRRGGSVVLVSSGVAYVPVPKLGVYNTSKTALLGLCKSLAVELAPKGI 210

Query: 758 NVSITLCIL-GLIDTDTAM 811
            V+   C++ G+I TD ++
Sbjct: 211 RVN---CLVPGIIKTDFSL 226


>ref|NP_001033027.2| dehydrogenase/reductase SDR family member 4 isoform 1 [Mus
           musculus].
          Length = 279

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 8/201 (3%)
 Frame = +2

Query: 221 RPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSAH 400
           R   L  K  +VT ++ GIG  +A  LA  GAHVVV++R ++ + + V+     G S   
Sbjct: 27  RRNPLSNKVALVTASTDGIGFAIARRLAEDGAHVVVSSRKQQNVDRAVATLQGEGLSVTG 86

Query: 401 YV--AGTMEDMTFAEQFVAKAGKLLGGLDMLILNHITHASMTPFSDDIHLVR-----RSM 559
            V   G  ED    E+ +  A K   G+D+L+ N    A++ PF  ++  V      + +
Sbjct: 87  IVCHVGKAED---REKLITTALKRHQGIDILVSN----AAVNPFFGNLMDVTEEVWDKVL 139

Query: 560 EVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRK 736
            +N  +  ++  A +P M K+  GS+V+V S AG    P + PY+ SK AL G   +   
Sbjct: 140 SINVTATAMMIKAVVPEMEKRGGGSVVIVGSVAGFTRFPSLGPYNVSKTALLGLTKNFAA 199

Query: 737 EYSVTKVNVSITLCILGLIDT 799
           E  +   N+ +     GLI T
Sbjct: 200 E--LAPKNIRVNCLAPGLIKT 218


>ref|NP_001156958.1| 17-beta-hydroxysteroid dehydrogenase 13 isoform 1 [Mus musculus].
          Length = 300

 Score = 72.4 bits (176), Expect = 5e-13
 Identities = 57/206 (27%), Positives = 105/206 (50%), Gaps = 6/206 (2%)
 Frame = +2

Query: 140 MAFMKKYLLPILGIFLAYYYYSANEEFRP---EMLRGKKVIVTGASKGIGREMAYHLARM 310
           M  + ++LL ++G+ +  Y  S  + F P   + + G+ V++TGA  GIGR  AY  A+ 
Sbjct: 1   MNLILEFLL-LVGVIIYSYLESLVKFFIPRRRKSVTGQTVLITGAGHGIGRLTAYEFAKQ 59

Query: 311 GAHVVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLI 490
            + +V+   ++  +++    C +LGA   H       +       V +  + +G +++++
Sbjct: 60  KSRLVLWDINKRGVEETADKCRKLGA-VVHVFVVDCSNRAEIYNSVDQVKREVGDVEIVV 118

Query: 491 LN--HITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGK 661
            N   I  A +    D+   + ++ EVN L +  +  A LP ML++++G IV V+S  G 
Sbjct: 119 NNAGAIYPADLLSAKDE--EITKTFEVNILGHFWIIKALLPSMLRRNSGHIVTVASVCGH 176

Query: 662 MANPLVAPYSASKFALDGFFSSIRKE 739
              P + PY +SKFA  GF  ++  E
Sbjct: 177 GVIPYLIPYCSSKFAAVGFHRALTAE 202


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 31,228,172
Number of extensions: 819086
Number of successful extensions: 2911
Number of sequences better than 1.0e-05: 48
Number of HSP's gapped: 2864
Number of HSP's successfully gapped: 48
Length of query: 326
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 224
Effective length of database: 12,553,887
Effective search space: 2812070688
Effective search space used: 2812070688
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002120
         (979 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_999413.1| corticosteroid 11-beta-dehydrogenase isozyme 1 ...   450   e-127
Alignment   gi|XP_003123133.1| PREDICTED: hydroxysteroid 11-beta-dehydrogen...   196   2e-50
Alignment   gi|XP_001928783.1| PREDICTED: dehydrogenase/reductase SDR famil...    89   4e-18
Alignment   gi|NP_999184.1| dehydrogenase/reductase SDR family member 4 [Su...    81   8e-16
Alignment   gi|XP_001925948.1| PREDICTED: 3-ketodihydrosphingosine reductas...    80   1e-15
Alignment   gi|XP_003129386.2| PREDICTED: estradiol 17-beta-dehydrogenase 1...    80   2e-15
Alignment   gi|NP_001161121.1| estradiol 17-beta-dehydrogenase 2 [Sus scrof...    79   4e-15
Alignment   gi|NP_001230551.1| hydroxysteroid (17-beta) dehydrogenase 13 [S...    77   1e-14
Alignment   gi|XP_003132036.2| PREDICTED: dehydrogenase/reductase SDR famil...    70   1e-12
Alignment   gi|NP_001182297.1| epidermal retinol dehydrogenase 2 [Sus scrof...    68   9e-12

>ref|NP_999413.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Sus scrofa].
          Length = 292

 Score =  450 bits (1157), Expect = e-127
 Identities = 241/280 (86%), Positives = 247/280 (88%)
 Frame = +2

Query: 140 MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH 319
           MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH
Sbjct: 1   MAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAH 60

Query: 320 VVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH 499
           VVVTARSEETLKKVVSH LELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH
Sbjct: 61  VVVTARSEETLKKVVSHSLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH 120

Query: 500 ITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV 679
           IT A MT   DDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV
Sbjct: 121 ITQAFMTSVYDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLV 180

Query: 680 APYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGNTHVQPSPKEN 859
           APYSASKFALDGFFSSI KEYSVTKVNVSITLCILGLIDTDTAMTAVAG  +VQPSPKE 
Sbjct: 181 APYSASKFALDGFFSSITKEYSVTKVNVSITLCILGLIDTDTAMTAVAGILNVQPSPKEE 240

Query: 860 VPWKLSKGQLCAKRKCIMTAQS*LLSCWEIQGRKILEFLS 979
              ++ KG    + +    +        E  GRKILEFLS
Sbjct: 241 CALEIIKGAALRQEEVYYDSSILTSLLLENPGRKILEFLS 280


>ref|XP_003123133.1| PREDICTED: hydroxysteroid 11-beta-dehydrogenase 1-like protein-like
           [Sus scrofa].
          Length = 293

 Score =  196 bits (498), Expect = 2e-50
 Identities = 108/235 (45%), Positives = 148/235 (62%), Gaps = 1/235 (0%)
 Frame = +2

Query: 149 MKKYLLPILG-IFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVV 325
           MK  LL  LG +F AYY+    + F P  LRG +V++TGAS G+G E+AYH AR+G+H+V
Sbjct: 7   MKVLLLTGLGALFFAYYW---GDNFDPASLRGARVLLTGASAGVGEELAYHYARLGSHLV 63

Query: 326 VTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHIT 505
           +TA +E  L+KVV +C +LGA    Y+A  M      E+ V  A   LGGLD L+LNH+ 
Sbjct: 64  LTAHTEALLQKVVGNCRKLGAPKVFYIAADMASPDVPERVVQFALDKLGGLDYLVLNHLG 123

Query: 506 HASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLVAP 685
            A     +     +R  ++VNF+SYV L+  ALP L  S GS+VVVSS  G++     +P
Sbjct: 124 AAPAGTRARSAQAIRWLLQVNFISYVQLTSLALPSLTDSKGSLVVVSSLLGRVPTSFSSP 183

Query: 686 YSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTAMTAVAGNTHVQPSP 850
           YSA+KFALD FF S+R+E  +  VNV+IT+C+LGL D  +A   V G T  + +P
Sbjct: 184 YSAAKFALDSFFDSLRRELDMQDVNVAITMCVLGLRDHASAAEGVRGVTRAKAAP 238


>ref|XP_001928783.1| PREDICTED: dehydrogenase/reductase SDR family member 7 [Sus
           scrofa].
          Length = 339

 Score = 89.0 bits (219), Expect = 4e-18
 Identities = 61/178 (34%), Positives = 91/178 (51%), Gaps = 5/178 (2%)
 Frame = +2

Query: 221 RPEM-LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSA 397
           RPE  L    V VTGAS GIG E+ Y L+++G  +V++AR  + L++V   CLE G    
Sbjct: 43  RPEWELTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKG 102

Query: 398 HYVAGTMEDMTFAEQFVAKAGKLL---GGLDMLILNHITHASMTPFSDDIHLVRRSMEVN 568
             +     D+            +L   G +D+L+ N             + + +  MEVN
Sbjct: 103 KDILILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVN 162

Query: 569 FLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKE 739
           +L  V L+   LP M+++  G I+ V+S  G +A PL   Y ASK AL GFF+++R E
Sbjct: 163 YLGTVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTE 220


>ref|NP_999184.1| dehydrogenase/reductase SDR family member 4 [Sus scrofa].
          Length = 260

 Score = 81.3 bits (199), Expect = 8e-16
 Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%)
 Frame = +2

Query: 221 RPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSAH 400
           R + L  K  +VT ++ GIG  +A  LA+ GAHVVV++R +E + + V+     G S   
Sbjct: 8   RRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTG 67

Query: 401 YV--AGTMEDMTFAEQFVAKAGKLLGGLDMLILNHITHASMTPFSDDI-----HLVRRSM 559
            V   G  ED    E+ VA A  L GG+D+L+ N    A++ PF  +I      +  + +
Sbjct: 68  TVCHVGKAED---RERLVAMAVNLHGGVDILVSN----AAVNPFFGNIIDATEEVWDKIL 120

Query: 560 EVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRK 736
            VN  + V+++ A +P M K+  GS+++VSS       P + PY+ SK AL G   ++  
Sbjct: 121 HVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAV 180

Query: 737 EYSVTKVNVSITLCILGLIDTD 802
           E  +   N+ +     GLI T+
Sbjct: 181 E--LAPRNIRVNCLAPGLIKTN 200


>ref|XP_001925948.1| PREDICTED: 3-ketodihydrosphingosine reductase-like [Sus scrofa].
          Length = 332

 Score = 80.5 bits (197), Expect = 1e-15
 Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 6/218 (2%)
 Frame = +2

Query: 170 ILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEET 349
           ++   L  Y  S     +P  L G  V+VTG S GIG+ +A    + GA + + AR+E+ 
Sbjct: 9   LVAFVLLLYMVSPLISPKPLALPGAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDK 68

Query: 350 L----KKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHITHASM 517
           L    K++  H +              +D +  E  + +A + LG +DML+ N    +  
Sbjct: 69  LLQAKKEIEKHSINDKQVVLCISVDVSQDYSQVENVIKQAQEKLGPVDMLV-NCAGMSLS 127

Query: 518 TPFSD-DIHLVRRSMEVNFLSYVVLSVAALPMLKQSN-GSIVVVSSQAGKMANPLVAPYS 691
             F D ++    R M VN+L  V  S A +  +K+   G IV VSSQAG++       YS
Sbjct: 128 GKFEDLEVSTFERLMSVNYLGSVYPSRAVITTMKERRVGRIVFVSSQAGQLGLFGFTAYS 187

Query: 692 ASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDT 805
           +SKFA+ G   +++ E  V   NV +T+      DTDT
Sbjct: 188 SSKFAIRGLAEALQME--VKPYNVYVTVAYPP--DTDT 221


>ref|XP_003129386.2| PREDICTED: estradiol 17-beta-dehydrogenase 11-like [Sus scrofa].
          Length = 313

 Score = 79.7 bits (195), Expect = 2e-15
 Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 4/211 (1%)
 Frame = +2

Query: 161 LLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARS 340
           LLP+L IF            + + + G+ V++TGA  G+GR  A+  A++   +V+   +
Sbjct: 10  LLPLLLIFTLESLLKLFIPKKRKSVTGEIVLITGAGHGLGRLTAFEFAKLKCKLVLWDIN 69

Query: 341 EETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKL---LGGLDMLILNHITHA 511
           +  L++    C  LG+ +  +V     D +  E   + A K+   +G + +L+ N     
Sbjct: 70  KHGLEETADECKRLGSKAHAFVV----DCSDREDIYSSAKKVKAEVGDVSILVNNAGVVY 125

Query: 512 SMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPY 688
           +   F+     + ++ EVN L++   + A LP M+K ++G IV V+S AG    P +  Y
Sbjct: 126 TSDLFATQDPQIEKTFEVNILAHFWTTKAFLPAMMKNNHGHIVTVASAAGHAGIPFLLAY 185

Query: 689 SASKFALDGFFSSIRKEYSVTKVNVSITLCI 781
            +SKFA  GF  ++ +E +  K     T C+
Sbjct: 186 CSSKFAAVGFHKALTEELAALKRTGVKTTCL 216


>ref|NP_001161121.1| estradiol 17-beta-dehydrogenase 2 [Sus scrofa].
          Length = 388

 Score = 79.0 bits (193), Expect = 4e-15
 Identities = 75/258 (29%), Positives = 127/258 (49%), Gaps = 8/258 (3%)
 Frame = +2

Query: 113 GLLGPGPCLMAFMKKY--LLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGRE 286
           GL G G CL++    +  +L  L  FL Y Y+S  +EF P  +  K V++TG   GIG  
Sbjct: 43  GLWG-GACLLSLSLFWGLILFSLSCFLMYAYFSG-QEFLP--VDQKAVLITGGDSGIGHA 98

Query: 287 MAYHLARMGAHVVVTARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGKL 466
           ++ +L ++G  V      E+      S   EL  + + +++    D+T ++Q      K+
Sbjct: 99  LSKYLDKLGFIVFAGVLDEKG-----SGAEELRRTCSKHLSVLQLDITNSQQIRDAHSKV 153

Query: 467 LGGLDMLIL-NHITHASMTPFSDDIHLV-----RRSMEVNFLSYVVLSVAALPMLKQSNG 628
           +  +    L   + +A +  F  D  L+     +R M VNF   V ++ A LP+L++S G
Sbjct: 154 MEKVQNRGLWAVVNNAGILGFPIDGELIPMTQYKRCMAVNFFGAVEVTKAFLPLLRKSKG 213

Query: 629 SIVVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKEYSVTKVNVSITLCILGLIDTDTA 808
            +V +SS AG +    +A YS++K AL  F + +RKE S   V VS+       I   + 
Sbjct: 214 RLVNISSMAGGVPMEKMAAYSSTKAALTMFSAVMRKELSKWGVKVSV-------IQPGSF 266

Query: 809 MTAVAGNTHVQPSPKENV 862
            T +AG + +    ++N+
Sbjct: 267 QTNIAGTSDLWDKLEKNI 284


>ref|NP_001230551.1| hydroxysteroid (17-beta) dehydrogenase 13 [Sus scrofa].
          Length = 300

 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 7/214 (3%)
 Frame = +2

Query: 161 LLPILGIFLAYYYYSANEEFRP---EMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVT 331
           LL +L I +  Y  S  + F P   + + G+ V+VTGA  GIGR++AY  A+  + +V+ 
Sbjct: 7   LLFLLIIIIYSYLESLVKVFIPRRRKSVAGEIVLVTGAGHGIGRKIAYEFAKRKSRLVLW 66

Query: 332 ARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQF---VAKAGKLLGGLDMLILNHI 502
             ++  L++  + C +LGA++  +V     D +  E+    V +  K +G + +++ N  
Sbjct: 67  DINKHGLEETAAECKKLGATTHAFVV----DCSNREEIYNSVNQVKKEVGDITIVVNNAG 122

Query: 503 THASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLV 679
           T       S     +  + EVN L +  ++ A LP M+ +++G +V V+S  G    P +
Sbjct: 123 TIYPADLLSTKDEEITITFEVNILGHFWITKALLPAMMSRNHGHVVTVASLCGHGVIPYL 182

Query: 680 APYSASKFALDGFFSSIRKEYSVTKVNVSITLCI 781
            PY +SKFA  GF  ++  E          T C+
Sbjct: 183 IPYCSSKFAAVGFHRALTAELEAVGKTGIKTSCL 216


>ref|XP_003132036.2| PREDICTED: dehydrogenase/reductase SDR family member 7C-like [Sus
           scrofa].
          Length = 311

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 6/207 (2%)
 Frame = +2

Query: 164 LPILGIF-LAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARS 340
           L +LGI  L + Y   +  +    ++ K V++T A  G+G+E A      GA +V+  ++
Sbjct: 11  LLLLGISGLLFIYQEVSRLWSKSAVQNKVVVITDAISGLGKECARVFHTGGARLVLCGKN 70

Query: 341 EETLKKVVSHCLELGASSAHY----VAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHITH 508
            E L+ +    + +   S  +    V   + D++  +    +     G +D+LI N    
Sbjct: 71  WERLQTLYDALISVADPSKTFTPKLVLLDLSDISCVQDVAKEVLDCYGCVDILISNASMK 130

Query: 509 ASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAP 685
                    + L ++ M+ N+   + L+ A LP M+ +  G IV+V++  G++  P    
Sbjct: 131 VKGPAHKISLELDKKIMDANYFGPITLTKALLPNMISRRTGQIVLVNNIQGRLGIPFRTA 190

Query: 686 YSASKFALDGFFSSIRKEYSVTKVNVS 766
           Y+ASK A  GFF  +R E     V VS
Sbjct: 191 YAASKHAALGFFDCLRAEVEEFDVVVS 217


>ref|NP_001182297.1| epidermal retinol dehydrogenase 2 [Sus scrofa].
          Length = 309

 Score = 67.8 bits (164), Expect = 9e-12
 Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 7/220 (3%)
 Frame = +2

Query: 116 LLGPGPCLMAFMKKYLLPILGIFLAYYYYSANEEFRPEMLRGKKVIVTGASKGIGREMAY 295
           +LG    L+ F+ K +L ++   +  +     ++     + G+ V++TGA  G+GR +A 
Sbjct: 4   ILGLAQELLVFLGKSILVVVESLVFTFIPVPRKK-----VAGEIVLITGAGSGLGRLLAL 58

Query: 296 HLARMGAHVVV----TARSEETLKKVVSHCLELGASSAHYVAGTMEDMTFAEQFVAKAGK 463
             AR+G+ +V+      R+EET K V     E G + A+             +  ++  K
Sbjct: 59  KFARLGSVLVLWDINQERNEETRKMV----QEAGVAGAYAYTCDCSQREDVYRVASQVKK 114

Query: 464 LLGGLDMLILNH--ITHASMTPFSDDIHLVRRSMEVNFLSYVVLSVAALP-MLKQSNGSI 634
            +G + +LI N   +T        D+  L+ +S++VNF +++    A LP M+   +G +
Sbjct: 115 EVGDVSILINNAGIVTGRKFLDCPDE--LMEKSLDVNFKAHLWTYKAFLPAMIANDHGHL 172

Query: 635 VVVSSQAGKMANPLVAPYSASKFALDGFFSSIRKEYSVTK 754
           V +SS AG +    +A Y ASKFA  GF  ++  E   +K
Sbjct: 173 VCISSSAGLIGVYGLADYCASKFAAFGFAETVFFETFASK 212


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 24,057,831
Number of extensions: 764972
Number of successful extensions: 2261
Number of sequences better than 1.0e-05: 32
Number of HSP's gapped: 2225
Number of HSP's successfully gapped: 32
Length of query: 326
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 227
Effective length of database: 8,879,129
Effective search space: 2015562283
Effective search space used: 2015562283
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002120
         (979 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|GL894531.1| Sus scrofa unplaced genomic scaffold chrU_scaffol...   373   e-100
Sscrofa_Chr09                                                          76   4e-11

>gb|GL894531.1| Sus scrofa unplaced genomic scaffold chrU_scaffold3187
          Length = 27161

 Score =  373 bits (188), Expect = e-100
 Identities = 188/188 (100%)
 Strand = Plus / Minus

                                                                         
Query: 470   gggggcctggacatgctcattctcaaccacatcacccacgcctccatgactccgtttagt 529
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23005 gggggcctggacatgctcattctcaaccacatcacccacgcctccatgactccgtttagt 22946

                                                                         
Query: 530   gacgacatccacctcgtgcgcagaagcatggaggtcaacttcctcagctacgtggtcctc 589
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22945 gacgacatccacctcgtgcgcagaagcatggaggtcaacttcctcagctacgtggtcctc 22886

                                                                         
Query: 590   agcgtggccgccttgcccatgctgaagcagagcaacgggagcatcgtggtggtctcgtcc 649
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22885 agcgtggccgccttgcccatgctgaagcagagcaacgggagcatcgtggtggtctcgtcc 22826

                     
Query: 650   caggcggg 657
             ||||||||
Sbjct: 22825 caggcggg 22818



 Score =  295 bits (149), Expect = 2e-77
 Identities = 180/185 (97%), Gaps = 4/185 (2%)
 Strand = Plus / Minus

                                                                        
Query: 797  acagacacggccatgacagcagtggctgggaatactca-cgtacaaccatctccaaagga 855
            ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 1251 acagacacggccatgacagcagtggctggga-tactcaacgtacaaccatctccaaagga 1193

                                                                        
Query: 856  -gaatgtgccctggaaattatcaaaggggcagctttgcgccaagaggaagtgtattatga 914
             ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1192 agaatgcgccctggaaattatcaaaggggcagctttgcgccaagaggaagtgtattatga 1133

                                                                        
Query: 915  cagctcaatcttgacttctctcctgctgggaaatccaggggaggaagatcctggaatttc 974
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1132 cagctcaatcttgacttctctcctgctgggaaatcca-gggaggaagatcctggaatttc 1074

                 
Query: 975  tgtcc 979
            |||||
Sbjct: 1073 tgtcc 1069



 Score =  287 bits (145), Expect = 6e-75
 Identities = 145/145 (100%)
 Strand = Plus / Minus

                                                                        
Query: 656  gggaaaatggcgaatccacttgttgctccctattctgcaagcaagtttgctctggacggg 715
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3175 gggaaaatggcgaatccacttgttgctccctattctgcaagcaagtttgctctggacggg 3116

                                                                        
Query: 716  ttcttctcctctatcaggaaagaatattcagtgaccaaggtcaacgtgtcaatcacgctc 775
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3115 ttcttctcctctatcaggaaagaatattcagtgaccaaggtcaacgtgtcaatcacgctc 3056

                                     
Query: 776  tgtatcctcggtctcatagacacag 800
            |||||||||||||||||||||||||
Sbjct: 3055 tgtatcctcggtctcatagacacag 3031



 Score =  274 bits (138), Expect = 9e-71
 Identities = 138/138 (100%)
 Strand = Plus / Minus

                                                                         
Query: 224   ccagagatgcttcgaggaaagaaagtgattgtcacaggggccagcaaggggatcggaaga 283
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24199 ccagagatgcttcgaggaaagaaagtgattgtcacaggggccagcaaggggatcggaaga 24140

                                                                         
Query: 284   gagatggcctatcatctggcgaggatgggagcccatgtggtggtgacagcgaggtcagaa 343
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24139 gagatggcctatcatctggcgaggatgggagcccatgtggtggtgacagcgaggtcagaa 24080

                               
Query: 344   gaaactctcaagaaggtg 361
             ||||||||||||||||||
Sbjct: 24079 gaaactctcaagaaggtg 24062



 Score =  230 bits (116), Expect = 1e-57
 Identities = 116/116 (100%)
 Strand = Plus / Minus

                                                                         
Query: 112   agggctcctcgggccaggtccctgtctgatggcttttatgaaaaaatatctcctccctat 171
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25070 agggctcctcgggccaggtccctgtctgatggcttttatgaaaaaatatctcctccctat 25011

                                                                     
Query: 172   tctggggatcttcttggcctactactactattccgcaaatgaggaattcagaccag 227
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25010 tctggggatcttcttggcctactactactattccgcaaatgaggaattcagaccag 24955



 Score =  228 bits (115), Expect = 5e-57
 Identities = 115/115 (100%)
 Strand = Plus / Minus

                                                                         
Query: 357   aggtggtgtcccactgcctggagcttggcgcgtcttcagcacactacgttgctggcacca 416
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23221 aggtggtgtcccactgcctggagcttggcgcgtcttcagcacactacgttgctggcacca 23162

                                                                    
Query: 417   tggaggacatgaccttcgcagagcaatttgttgccaaagctggaaagctcctggg 471
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23161 tggaggacatgaccttcgcagagcaatttgttgccaaagctggaaagctcctggg 23107


>Sscrofa_Chr09 
||          Length = 153670197

 Score = 75.8 bits (38), Expect = 4e-11
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                       
Query: 77        tcaataaaaagaagtcaaatttggttgaaaccccaagg 114
                 ||||||||||||||||||||||||||||||||||||||
Sbjct: 146503108 tcaataaaaagaagtcaaatttggttgaaaccccaagg 146503145


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 26,377,193
Number of extensions: 133
Number of successful extensions: 133
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 130
Number of HSP's successfully gapped: 7
Length of query: 979
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 958
Effective length of database: 2,808,413,156
Effective search space: 2690459803448
Effective search space used: 2690459803448
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)