Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002434
(1255 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001068988.1| cytochrome P450, family 2, subfamily c [Bos ... 471 e-133
Alignment gi|NP_001069519.1| cytochrome P450, family 2, subfamily C, poly... 366 e-105
Alignment gi|XP_002698439.1| PREDICTED: cytochrome P450, family 2, subfam... 353 e-101
Alignment gi|XP_612374.2| PREDICTED: cytochrome P450, family 2, subfamily... 353 e-101
Alignment gi|XP_002698442.1| PREDICTED: cytochrome P450 family 2 subfamil... 350 e-101
Alignment gi|XP_581757.3| PREDICTED: cytochrome P450 family 2 subfamily C... 350 e-101
Alignment gi|XP_002698440.1| PREDICTED: cytochrome P450, family 2, subfam... 351 e-100
Alignment gi|NP_001103262.1| cytochrome P450, family 2, subfamily C, poly... 348 e-100
Alignment gi|XP_002698445.1| PREDICTED: cytochrome P450, family 2, subfam... 344 2e-98
Alignment gi|XP_001252335.1| PREDICTED: cytochrome P450, family 2, subfam... 344 2e-98
>ref|NP_001068988.1| cytochrome P450, family 2, subfamily c [Bos taurus].
Length = 495
Score = 471 bits (1211), Expect = e-133
Identities = 235/332 (70%), Positives = 267/332 (80%), Gaps = 1/332 (0%)
Frame = +1
Query: 226 MELLGITTLALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXX-NLMQLNLKDIPASLS 402
ME L ITTLAL++CVTCLVFL VWKK+HK NLMQLNLKDIPASLS
Sbjct: 1 MERLEITTLALVICVTCLVFLFVWKKSHKGLGKLPPGPTPLPIIGNLMQLNLKDIPASLS 60
Query: 403 KLAKQYGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFS 582
KLAKQYG V T++ GSQ VVLHGYE VKEALIDQGDEFLGR PIIDDTQ GYGLIFS
Sbjct: 61 KLAKQYGPVYTLHLGSQTTVVLHGYEVVKEALIDQGDEFLGRAHFPIIDDTQRGYGLIFS 120
Query: 583 NGERWKQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPC 762
NG+ WKQ+RRFSLMTLRNFGMGKRSLEER+QEEAQFLVEE RK+EAQPF+P LSCA C
Sbjct: 121 NGDTWKQMRRFSLMTLRNFGMGKRSLEERIQEEAQFLVEEFRKSEAQPFNPAVTLSCATC 180
Query: 763 NVICSILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSK 942
N+ICSILFN+RFHY ++T SL++LLN NF ++S W QIYNLWP++IK LPGEHRAFSK
Sbjct: 181 NIICSILFNERFHYQDKTLHSLLDLLNENFNRISSLWNQIYNLWPKLIKPLPGEHRAFSK 240
Query: 943 RLKDCRSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFV 1122
RLKD F+LEKVKEH+KS N NNP+DYIDCFLS+MEQEKQNP+S+FHL+NL G+N
Sbjct: 241 RLKDVHYFVLEKVKEHQKSLNHNNPRDYIDCFLSRMEQEKQNPESQFHLENLATCGSNLF 300
Query: 1123 VAGTETTTSTLRYGLLLLMNTLRFQPKFMKKL 1218
AG ETTT+TL YGLLLLM Q K +++
Sbjct: 301 SAGVETTTATLSYGLLLLMKYPEVQAKVHEEI 332
>ref|NP_001069519.1| cytochrome P450, family 2, subfamily C, polypeptide 18 [Bos taurus].
Length = 490
Score = 366 bits (940), Expect(2) = e-105
Identities = 176/310 (56%), Positives = 230/310 (74%)
Frame = +1
Query: 250 LALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSV 429
+ L++C++CL+ LS+WK++ + N++QL++K+I SLS L+ YG V
Sbjct: 5 VVLVLCLSCLLLLSLWKQSSGKGKLPPGPTPLPILGNILQLDVKNIGKSLSNLSNTYGPV 64
Query: 430 CTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIR 609
TVYFG +P VVLHGYEAVKEALIDQG+EF GRG IP+ GYG+IFSNG+RWK+IR
Sbjct: 65 FTVYFGLRPTVVLHGYEAVKEALIDQGEEFSGRGNIPMSQRVNKGYGIIFSNGKRWKEIR 124
Query: 610 RFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFN 789
RFSLMTLRNFGMGKRS+E+RVQEEA LVEELRKT P DPTFIL CAPCNVICSI+F
Sbjct: 125 RFSLMTLRNFGMGKRSIEDRVQEEAHCLVEELRKTNGSPCDPTFILGCAPCNVICSIIFQ 184
Query: 790 DRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFI 969
+RF Y ++ FL+L++ N N + +SPW+Q+ N +P +I + PG H K RS++
Sbjct: 185 NRFDYTDQNFLNLLDKFNENLQVASSPWMQVCNTFPILIDYFPGSHNKLFKNFAYIRSYV 244
Query: 970 LEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTS 1149
LEKVKEH+ + ++NNP+D+IDCFL KMEQEK N + EF +NLI S ++ AGTETT++
Sbjct: 245 LEKVKEHQATLDINNPRDFIDCFLIKMEQEKHNQEMEFTFENLIASVSDLFGAGTETTST 304
Query: 1150 TLRYGLLLLM 1179
TLRYGLL+L+
Sbjct: 305 TLRYGLLMLL 314
Score = 36.2 bits (82), Expect(2) = e-105
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+HPEV+AKV E+IDRVIGR P
Sbjct: 315 KHPEVTAKVQEEIDRVIGRHRSP 337
>ref|XP_002698439.1| PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide
87-like isoform 1 [Bos taurus].
Length = 490
Score = 353 bits (905), Expect(2) = e-101
Identities = 169/310 (54%), Positives = 229/310 (73%)
Frame = +1
Query: 250 LALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSV 429
+ L++C+ CL+ +S+WK++ + N++QL++KDI S+S L+K YG V
Sbjct: 5 VVLVLCLCCLLLISLWKQSSGKGKLPPGPTPLPILGNILQLDVKDISKSVSNLSKVYGPV 64
Query: 430 CTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIR 609
T+YFG P VVLHGYEAVKEALI G+EF GRG P+I GYG+IFSNG+ WK+ R
Sbjct: 65 FTLYFGMNPLVVLHGYEAVKEALIGLGEEFSGRGSCPVIQRASKGYGVIFSNGKIWKETR 124
Query: 610 RFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFN 789
RFSLMTLR+FGMGKRS+E+RVQ+EA LVEELRKT+ P DPTFIL CAPCNVICSI+F
Sbjct: 125 RFSLMTLRDFGMGKRSMEDRVQQEACCLVEELRKTDGLPCDPTFILGCAPCNVICSIIFQ 184
Query: 790 DRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFI 969
+ F Y ++ FL LM LN N R L SPWIQ+ + +P +I ++PG+H+ F + +S++
Sbjct: 185 NHFDYKDQIFLDLMERLNENARILGSPWIQLCSSFPALIDYVPGKHKKFFENYACMKSYV 244
Query: 970 LEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTS 1149
LEK +EH+ S ++NNP+D+IDCFL+KMEQEK N + E+ ++NL ++ + VAGTETT++
Sbjct: 245 LEKTREHQASLDMNNPRDFIDCFLTKMEQEKHNQELEYTVENLAHTVLDLFVAGTETTST 304
Query: 1150 TLRYGLLLLM 1179
TLRYGLLLL+
Sbjct: 305 TLRYGLLLLL 314
Score = 34.3 bits (77), Expect(2) = e-101
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+HPEV+AKV E+ID VIGR P
Sbjct: 315 KHPEVTAKVQEEIDHVIGRHRSP 337
>ref|XP_612374.2| PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide
87-like isoform 2 [Bos taurus].
Length = 490
Score = 353 bits (905), Expect(2) = e-101
Identities = 169/310 (54%), Positives = 229/310 (73%)
Frame = +1
Query: 250 LALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSV 429
+ L++C+ CL+ +S+WK++ + N++QL++KDI S+S L+K YG V
Sbjct: 5 VVLVLCLCCLLLISLWKQSSGKGKLPPGPTPLPILGNILQLDVKDISKSVSNLSKVYGPV 64
Query: 430 CTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIR 609
T+YFG P VVLHGYEAVKEALI G+EF GRG P+I GYG+IFSNG+ WK+ R
Sbjct: 65 FTLYFGMNPLVVLHGYEAVKEALIGLGEEFSGRGSCPVIQRASKGYGVIFSNGKIWKETR 124
Query: 610 RFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFN 789
RFSLMTLR+FGMGKRS+E+RVQ+EA LVEELRKT+ P DPTFIL CAPCNVICSI+F
Sbjct: 125 RFSLMTLRDFGMGKRSMEDRVQQEACCLVEELRKTDGLPCDPTFILGCAPCNVICSIIFQ 184
Query: 790 DRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFI 969
+ F Y ++ FL LM LN N R L SPWIQ+ + +P +I ++PG+H+ F + +S++
Sbjct: 185 NHFDYKDQIFLDLMERLNENARILGSPWIQLCSSFPALIDYVPGKHKKFFENYACMKSYV 244
Query: 970 LEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTS 1149
LEK +EH+ S ++NNP+D+IDCFL+KMEQEK N + E+ ++NL ++ + VAGTETT++
Sbjct: 245 LEKTREHQASLDMNNPRDFIDCFLTKMEQEKHNQELEYTVENLAHTVLDLFVAGTETTST 304
Query: 1150 TLRYGLLLLM 1179
TLRYGLLLL+
Sbjct: 305 TLRYGLLLLL 314
Score = 34.3 bits (77), Expect(2) = e-101
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+HPEV+AKV E+ID VIGR P
Sbjct: 315 KHPEVTAKVQEEIDHVIGRHRSP 337
>ref|XP_002698442.1| PREDICTED: cytochrome P450 family 2 subfamily C polypeptide 18-like
isoform 1 [Bos taurus].
Length = 490
Score = 350 bits (899), Expect(2) = e-101
Identities = 172/310 (55%), Positives = 224/310 (72%)
Frame = +1
Query: 250 LALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSV 429
+ L++C++CL+ LS+WK++ + N++QL++K+I SL+ L+K YG V
Sbjct: 5 VVLVLCLSCLLLLSLWKQSSGKGKLPPGPTPLPILGNILQLDVKNISKSLTNLSKVYGPV 64
Query: 430 CTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIR 609
TVYFG +P VVLHGYEAVKEALID G+EF GRG+ P+ + G++FSNG+ WK+IR
Sbjct: 65 FTVYFGMKPIVVLHGYEAVKEALIDLGEEFSGRGMFPLAERANIVNGILFSNGKTWKEIR 124
Query: 610 RFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFN 789
RFSLMTLRNFGMGKRS+E+RVQEEA LVEELRKT P DPTFIL CAPCNVICSI+F
Sbjct: 125 RFSLMTLRNFGMGKRSIEDRVQEEACCLVEELRKTNGLPCDPTFILGCAPCNVICSIIFQ 184
Query: 790 DRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFI 969
+RF Y + FL LM LN R L+SPW+Q+ N +P + +LPG H K + + +SF+
Sbjct: 185 NRFDYKDPVFLDLMERLNEILRILSSPWVQVCNNFPALFDYLPGSHNKVLKNVANLKSFV 244
Query: 970 LEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTS 1149
LEK EH+ S ++NNP+DYIDCFL +MEQEKQN EF L+NL + + AGTET ++
Sbjct: 245 LEKAMEHKASLDINNPRDYIDCFLIRMEQEKQNQQLEFTLENLTTTVFDLFGAGTETMST 304
Query: 1150 TLRYGLLLLM 1179
TLRYGLLLL+
Sbjct: 305 TLRYGLLLLL 314
Score = 36.2 bits (82), Expect(2) = e-101
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+HPEV+AKV E+IDRVIGR P
Sbjct: 315 KHPEVTAKVQEEIDRVIGRHRSP 337
>ref|XP_581757.3| PREDICTED: cytochrome P450 family 2 subfamily C polypeptide 18-like
isoform 2 [Bos taurus].
Length = 490
Score = 350 bits (899), Expect(2) = e-101
Identities = 172/310 (55%), Positives = 224/310 (72%)
Frame = +1
Query: 250 LALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSV 429
+ L++C++CL+ LS+WK++ + N++QL++K+I SL+ L+K YG V
Sbjct: 5 VVLVLCLSCLLLLSLWKQSSGKGKLPPGPTPLPILGNILQLDVKNISKSLTNLSKVYGPV 64
Query: 430 CTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIR 609
TVYFG +P VVLHGYEAVKEALID G+EF GRG+ P+ + G++FSNG+ WK+IR
Sbjct: 65 FTVYFGMKPIVVLHGYEAVKEALIDLGEEFSGRGMFPLAERANIVNGILFSNGKTWKEIR 124
Query: 610 RFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFN 789
RFSLMTLRNFGMGKRS+E+RVQEEA LVEELRKT P DPTFIL CAPCNVICSI+F
Sbjct: 125 RFSLMTLRNFGMGKRSIEDRVQEEACCLVEELRKTNGLPCDPTFILGCAPCNVICSIIFQ 184
Query: 790 DRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFI 969
+RF Y + FL LM LN R L+SPW+Q+ N +P + +LPG H K + + +SF+
Sbjct: 185 NRFDYKDPVFLDLMERLNEILRILSSPWVQVCNNFPALFDYLPGSHNKVLKNVANLKSFV 244
Query: 970 LEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTS 1149
LEK EH+ S ++NNP+DYIDCFL +MEQEKQN EF L+NL + + AGTET ++
Sbjct: 245 LEKAMEHKASLDINNPRDYIDCFLIRMEQEKQNQQLEFTLENLTTTVFDLFGAGTETMST 304
Query: 1150 TLRYGLLLLM 1179
TLRYGLLLL+
Sbjct: 305 TLRYGLLLLL 314
Score = 36.2 bits (82), Expect(2) = e-101
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+HPEV+AKV E+IDRVIGR P
Sbjct: 315 KHPEVTAKVQEEIDRVIGRHRSP 337
>ref|XP_002698440.1| PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide
87-like isoform 2 [Bos taurus].
Length = 490
Score = 351 bits (901), Expect(2) = e-100
Identities = 168/310 (54%), Positives = 229/310 (73%)
Frame = +1
Query: 250 LALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSV 429
+ L++C+ CL+ +S+WK++ + N++QL++KDI S+S L+K YG V
Sbjct: 5 VVLVLCLCCLLLISLWKQSSGKGKLPPGPTPLPILGNILQLDVKDISKSVSNLSKVYGPV 64
Query: 430 CTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIR 609
T+YFG P VVLHGYEAVKEALI G+EF GRG P+I GYG+IFSNG+ WK+ R
Sbjct: 65 FTLYFGMNPLVVLHGYEAVKEALIGLGEEFSGRGSCPVIQRASKGYGVIFSNGKIWKETR 124
Query: 610 RFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFN 789
RFSLMTLR+FGMGKRS+E+RVQ+EA LVEELRKT+ P DPTFIL CAPCNVICSI+F
Sbjct: 125 RFSLMTLRDFGMGKRSMEDRVQQEACCLVEELRKTDGLPCDPTFILGCAPCNVICSIIFQ 184
Query: 790 DRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFI 969
+ F Y ++ FL LM LN N R L SPWIQ+ + +P +I ++PG+H+ F + +S++
Sbjct: 185 NHFDYKDQIFLDLMERLNENARILGSPWIQLCSSFPALIDYVPGKHKKFFENYACMKSYV 244
Query: 970 LEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTS 1149
LEK +EH+ S ++NNP+D+IDCFL+KME+EK N + E+ ++NL ++ + VAGTETT++
Sbjct: 245 LEKTREHQASLDMNNPRDFIDCFLTKMEKEKHNQELEYTVENLAHTVLDLFVAGTETTST 304
Query: 1150 TLRYGLLLLM 1179
TLRYGLLLL+
Sbjct: 305 TLRYGLLLLL 314
Score = 34.3 bits (77), Expect(2) = e-100
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+HPEV+AKV E+ID VIGR P
Sbjct: 315 KHPEVTAKVQEEIDHVIGRHRSP 337
>ref|NP_001103262.1| cytochrome P450, family 2, subfamily C, polypeptide 19 [Bos taurus].
Length = 490
Score = 348 bits (893), Expect(2) = e-100
Identities = 161/310 (51%), Positives = 223/310 (71%)
Frame = +1
Query: 250 LALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSV 429
+ L++C++ L+FL +W + H + N++Q+N+K++ S+SKLA+ YG V
Sbjct: 5 VVLVICLSILIFLFLWNQRHAKGKLPPGPTPLPIVGNILQINIKNVSKSISKLAEDYGPV 64
Query: 430 CTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIR 609
T+YFG +P VVLHGYEAVK+ LIDQ +EF GRG +P+ D+ G G++FSNGE WKQ R
Sbjct: 65 FTLYFGMKPTVVLHGYEAVKQVLIDQSEEFSGRGSLPVADNINQGLGIVFSNGEIWKQTR 124
Query: 610 RFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFN 789
RFSLM LRN GMGKR++E R+QEEA LVE L+KT P DPT +LSCAPCNVICSI+F
Sbjct: 125 RFSLMVLRNMGMGKRTIEHRIQEEALCLVEALKKTNGSPCDPTLLLSCAPCNVICSIIFR 184
Query: 790 DRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFI 969
+RF Y++E L+L+ N N R +++PW+++YN +P ++ + PG H K + + R FI
Sbjct: 185 NRFEYNDERLLTLIKYFNENSRLVSTPWVELYNTFPSLLHYFPGSHNTIFKNMTEQRKFI 244
Query: 970 LEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTS 1149
LE++K+H++S +LNNPQD+ID FL KME+EK N SEF + NLI + + AGTETT+
Sbjct: 245 LEEIKKHQESLDLNNPQDFIDYFLIKMEKEKHNKHSEFTMDNLITTVWDVFSAGTETTSL 304
Query: 1150 TLRYGLLLLM 1179
TLRYGLLLL+
Sbjct: 305 TLRYGLLLLL 314
Score = 36.6 bits (83), Expect(2) = e-100
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+HPEV+AKV E+IDRV+GR P
Sbjct: 315 KHPEVTAKVQEEIDRVVGRNRSP 337
>ref|XP_002698445.1| PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide
19-like isoform 2 [Bos taurus].
Length = 490
Score = 344 bits (882), Expect(2) = 2e-98
Identities = 161/311 (51%), Positives = 223/311 (71%)
Frame = +1
Query: 247 TLALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGS 426
++ L++C++ L+FL +W + H + N++Q+N+K++ S+SKLA+ YG
Sbjct: 4 SVVLVICLSILIFLFLWNQRHAKGTLPPGPTPLPIVGNILQINIKNVSKSISKLAEDYGP 63
Query: 427 VCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQI 606
V T+YFG +P VVLHGYEAVK+ LIDQ +EF GRG +P+ D+ G G+IFSNGE WKQ
Sbjct: 64 VFTLYFGMKPTVVLHGYEAVKQVLIDQSEEFSGRGSLPVADNINQGLGIIFSNGEIWKQT 123
Query: 607 RRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILF 786
RRFSLM LRN GMGKR++E R+QEEA LVE L+KT P DPTF+L+ APCNVICSI+F
Sbjct: 124 RRFSLMVLRNMGMGKRTIEHRIQEEALCLVEALKKTNGCPCDPTFLLTYAPCNVICSIIF 183
Query: 787 NDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSF 966
+RF Y +E+FL+L ++ N ++PWI++YN +P ++ +LPG H K + + R F
Sbjct: 184 RNRFEYSDESFLTLAKYIHENATIFSTPWIELYNAFPSLLHYLPGSHNTLFKNMTEQRKF 243
Query: 967 ILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTT 1146
ILEK+KEH++S +LNNPQD+ID FL KME+EK N SEF + NLI + + AG ETT+
Sbjct: 244 ILEKIKEHQESLDLNNPQDFIDYFLIKMEKEKHNKQSEFTMDNLITTVWDVFTAGIETTS 303
Query: 1147 STLRYGLLLLM 1179
+L+YGLLLL+
Sbjct: 304 ISLKYGLLLLL 314
Score = 34.7 bits (78), Expect(2) = 2e-98
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+HPEV+AKV E+I+RV+GR P
Sbjct: 315 KHPEVTAKVQEEINRVVGRNRSP 337
>ref|XP_001252335.1| PREDICTED: cytochrome P450, family 2, subfamily C, polypeptide
19-like isoform 1 [Bos taurus].
Length = 490
Score = 344 bits (882), Expect(2) = 2e-98
Identities = 161/311 (51%), Positives = 223/311 (71%)
Frame = +1
Query: 247 TLALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGS 426
++ L++C++ L+FL +W + H + N++Q+N+K++ S+SKLA+ YG
Sbjct: 4 SVVLVICLSILIFLFLWNQRHAKGTLPPGPTPLPIVGNILQINIKNVSKSISKLAEDYGP 63
Query: 427 VCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQI 606
V T+YFG +P VVLHGYEAVK+ LIDQ +EF GRG +P+ D+ G G+IFSNGE WKQ
Sbjct: 64 VFTLYFGMKPTVVLHGYEAVKQVLIDQSEEFSGRGSLPVADNINQGLGIIFSNGEIWKQT 123
Query: 607 RRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILF 786
RRFSLM LRN GMGKR++E R+QEEA LVE L+KT P DPTF+L+ APCNVICSI+F
Sbjct: 124 RRFSLMVLRNMGMGKRTIEHRIQEEALCLVEALKKTNGCPCDPTFLLTYAPCNVICSIIF 183
Query: 787 NDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSF 966
+RF Y +E+FL+L ++ N ++PWI++YN +P ++ +LPG H K + + R F
Sbjct: 184 RNRFEYSDESFLTLAKYIHENATIFSTPWIELYNAFPSLLHYLPGSHNTLFKNMTEQRKF 243
Query: 967 ILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTT 1146
ILEK+KEH++S +LNNPQD+ID FL KME+EK N SEF + NLI + + AG ETT+
Sbjct: 244 ILEKIKEHQESLDLNNPQDFIDYFLIKMEKEKHNKQSEFTMDNLITTVWDVFTAGIETTS 303
Query: 1147 STLRYGLLLLM 1179
+L+YGLLLL+
Sbjct: 304 ISLKYGLLLLL 314
Score = 34.7 bits (78), Expect(2) = 2e-98
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+HPEV+AKV E+I+RV+GR P
Sbjct: 315 KHPEVTAKVQEEINRVVGRNRSP 337
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 47,964,268
Number of extensions: 1313810
Number of successful extensions: 5077
Number of sequences better than 1.0e-05: 48
Number of HSP's gapped: 5038
Number of HSP's successfully gapped: 79
Length of query: 418
Length of database: 17,681,374
Length adjustment: 105
Effective length of query: 313
Effective length of database: 14,207,134
Effective search space: 4446832942
Effective search space used: 4446832942
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002434
(1255 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001003334.1| cytochrome P450 2C41 [Canis lupus familiaris]. 342 8e-98
Alignment gi|NP_001183973.1| cytochrome P450 2C21 [Canis lupus familiaris]. 339 4e-96
Alignment gi|XP_541606.2| PREDICTED: similar to Cytochrome P450 2G1 (CYPI... 303 3e-82
Alignment gi|NP_001032422.1| cytochrome P450 family 2 subfamily A polypep... 286 1e-81
Alignment gi|XP_855301.1| PREDICTED: similar to cytochrome P450, family 2... 300 3e-81
Alignment gi|NP_001041492.1| hypothetical protein LOC484493 [Canis lupus ... 277 4e-79
Alignment gi|NP_001003339.1| cytochrome P450 2E1 [Canis lupus familiaris]. 278 8e-75
Alignment gi|XP_855605.1| PREDICTED: cytochrome P450 2B11 [Canis familiar... 266 4e-71
Alignment gi|NP_001006653.1| cytochrome P450 2B11 [Canis lupus familiaris]. 265 9e-71
Alignment gi|XP_533661.2| PREDICTED: similar to cytochrome P450 monooxyge... 244 1e-64
>ref|NP_001003334.1| cytochrome P450 2C41 [Canis lupus familiaris].
Length = 489
Score = 342 bits (878), Expect(2) = 8e-98
Identities = 166/310 (53%), Positives = 220/310 (70%)
Frame = +1
Query: 250 LALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSV 429
+ L++C++C + LS+WK++ ++ N++QL+ KDI SLS L+K YG V
Sbjct: 5 VVLVLCLSCCLLLSLWKQSSRKGKLPPGPTPLPFIGNILQLD-KDINKSLSNLSKAYGPV 63
Query: 430 CTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIR 609
T+YFG +P VVLHGY+AVKE LID G+EF RG PI + GG+G+IF++G RWK++R
Sbjct: 64 FTLYFGMKPTVVLHGYDAVKETLIDLGEEFSARGRFPIAEKVSGGHGIIFTSGNRWKEMR 123
Query: 610 RFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFN 789
RF+L TLRN GMGK LE RVQEEA +LVEELRKT A P DPTF+L CA CNVICSI+F
Sbjct: 124 RFALTTLRNLGMGKSDLESRVQEEACYLVEELRKTNALPCDPTFVLGCASCNVICSIIFQ 183
Query: 790 DRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFI 969
+RF Y ++T + + LN NFR L+SPWIQ YN +P ++ +LPG H K +S+I
Sbjct: 184 NRFDYTDQTLIGFLEKLNENFRILSSPWIQAYNSFPALLHYLPGSHNTIFKNFAFIKSYI 243
Query: 970 LEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTS 1149
LEK+KEH++S ++NNP+D+ID FL KMEQEK N EF +NL + AGTETT++
Sbjct: 244 LEKIKEHQESFDVNNPRDFIDYFLIKMEQEKHNQPLEFTFENLKTIATDLFGAGTETTST 303
Query: 1150 TLRYGLLLLM 1179
TLRYGLLLL+
Sbjct: 304 TLRYGLLLLL 313
Score = 34.7 bits (78), Expect(2) = 8e-98
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+HPEV+ KV E+IDRVIGR P
Sbjct: 314 KHPEVTVKVQEEIDRVIGRHQSP 336
>ref|NP_001183973.1| cytochrome P450 2C21 [Canis lupus familiaris].
Length = 490
Score = 339 bits (870), Expect(2) = 4e-96
Identities = 161/310 (51%), Positives = 222/310 (71%)
Frame = +1
Query: 250 LALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSV 429
+ L++C++CL+ +W +N + N++Q+N K++ SLSKLA+ YG V
Sbjct: 5 IVLVICLSCLISFFLWNQNRAKGKLPPGPTPLPIIGNILQINTKNVSKSLSKLAENYGPV 64
Query: 430 CTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIR 609
TVYFG +P VVL+GYEAVKEALID+ +EF GRG P++D T G G++FSNGE+WKQ R
Sbjct: 65 FTVYFGMKPTVVLYGYEAVKEALIDRSEEFSGRGHFPLLDWTIQGLGIVFSNGEKWKQTR 124
Query: 610 RFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFN 789
RFSL LRN GMGK+++E+R+QEEA +LVE L+KT A P DPTF+L CAPCNVICSI+F
Sbjct: 125 RFSLTVLRNMGMGKKTVEDRIQEEALYLVEALKKTNASPCDPTFLLGCAPCNVICSIIFQ 184
Query: 790 DRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFI 969
+RF YD++ FL+L+ + N ++ WIQ+YN +P +I +LPG H K + + FI
Sbjct: 185 NRFEYDDKDFLTLLEYFHENLLISSTSWIQLYNAFPLLIHYLPGSHHVLFKNIANQFKFI 244
Query: 970 LEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTS 1149
EK+KEHE+S N +NP+D+ID FL K+E+EK N SEF + NLI + + AGTETT++
Sbjct: 245 SEKIKEHEESLNFSNPRDFIDYFLIKIEKEKHNKQSEFTMDNLIITIWDVFSAGTETTST 304
Query: 1150 TLRYGLLLLM 1179
TLRYGLL+L+
Sbjct: 305 TLRYGLLVLL 314
Score = 32.0 bits (71), Expect(2) = 4e-96
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+HP+V+AKV E+I RV+GR P
Sbjct: 315 KHPDVTAKVQEEIHRVVGRHRSP 337
>ref|XP_541606.2| PREDICTED: similar to Cytochrome P450 2G1 (CYPIIG1) (P450-OLF1)
(Olfactive) [Canis familiaris].
Length = 494
Score = 303 bits (775), Expect = 3e-82
Identities = 150/331 (45%), Positives = 218/331 (65%)
Frame = +1
Query: 226 MELLGITTLALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSK 405
MEL G T+ L + ++CL+ L WK+N K N++Q+ S K
Sbjct: 1 MELGGAFTIFLALSLSCLLILIAWKRNSKGGKLPPGPTPIPFLGNVLQVRTDATFQSFMK 60
Query: 406 LAKQYGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSN 585
L ++YG + TVY G +P VVL G+EAVKEAL+D+ DEF GRG + I+ G+G+ +N
Sbjct: 61 LREKYGPIFTVYMGPRPVVVLCGHEAVKEALVDRADEFSGRGELASIERNFQGHGVALAN 120
Query: 586 GERWKQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCN 765
GERW+ +RRFSL LR+FGMGKRS+EER+QEEA FL+EELRKT+ P +PTF LS N
Sbjct: 121 GERWRILRRFSLTILRDFGMGKRSIEERIQEEAGFLLEELRKTKGSPIEPTFFLSRTVSN 180
Query: 766 VICSILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKR 945
VI S++F RF Y+++ FL L+ ++N +F +++PW Q+Y+++ I+++LPG H
Sbjct: 181 VISSVVFGSRFDYEDKQFLKLLQMINESFIEMSTPWAQLYDMYSGIMQYLPGRHNRIYYL 240
Query: 946 LKDCRSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVV 1125
+++ + FI +VK +E S + NP+D+IDCFL KM Q+ NP +EF+LKNL+ + N
Sbjct: 241 IEELKDFIASRVKINEASLDPQNPRDFIDCFLIKMHQDTNNPHTEFNLKNLVLTTLNLFF 300
Query: 1126 AGTETTTSTLRYGLLLLMNTLRFQPKFMKKL 1218
AGTET +STLRYGLLL+M + K +++
Sbjct: 301 AGTETVSSTLRYGLLLMMKHPEVEAKIHEEI 331
>ref|NP_001032422.1| cytochrome P450 family 2 subfamily A polypeptide 13 [Canis lupus
familiaris].
Length = 494
Score = 286 bits (731), Expect(2) = 1e-81
Identities = 144/314 (45%), Positives = 211/314 (67%)
Frame = +1
Query: 238 GITTLALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQ 417
G+ +AL+ C+T +V +SVWK+ N +QLN + + SL K++++
Sbjct: 5 GLLLVALLACLTIIVLMSVWKQRKLGGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISER 64
Query: 418 YGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERW 597
YG V T++ G +P VVL G+EAVKEAL+DQ +EF GRG D GYG+ FSNGER
Sbjct: 65 YGPVFTIHLGPRPVVVLCGHEAVKEALVDQAEEFSGRGEQATFDWLFKGYGVAFSNGERA 124
Query: 598 KQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICS 777
KQ+RRFS+ TLR+FG+GKR +EER+QEEA FL+E LR T DPTF LS NVI S
Sbjct: 125 KQLRRFSITTLRDFGVGKRGIEERIQEEAGFLIEALRGTRGAFIDPTFFLSRTVSNVISS 184
Query: 778 ILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDC 957
I+F DRF Y+++ FLSL+ ++ +F+ + Q+Y ++ ++KHLPG + K L+
Sbjct: 185 IVFGDRFDYEDKEFLSLLRMMLGSFQFTATSMGQLYEMFYSVMKHLPGPQQQAFKELQGL 244
Query: 958 RSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTE 1137
FI +KV++++++ + N+P+D+ID FL +M++E+ NP++EF+LKNL+ + N AGTE
Sbjct: 245 EDFITKKVEQNQRTLDPNSPRDFIDSFLIRMQEEQNNPNTEFYLKNLVLTTLNLFFAGTE 304
Query: 1138 TTTSTLRYGLLLLM 1179
T ++TLRYG LLLM
Sbjct: 305 TVSTTLRYGFLLLM 318
Score = 37.4 bits (85), Expect(2) = 1e-81
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+HP+V AKVHE+IDRVIG+ P
Sbjct: 319 KHPDVEAKVHEEIDRVIGKNRQP 341
>ref|XP_855301.1| PREDICTED: similar to cytochrome P450, family 2, subfamily F,
polypeptide 1 [Canis familiaris].
Length = 582
Score = 300 bits (767), Expect = 3e-81
Identities = 144/327 (44%), Positives = 218/327 (66%)
Frame = +1
Query: 238 GITTLALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQ 417
G++T A+++ + L FL + + + NL+QL +D+ SL+KL+K+
Sbjct: 78 GVST-AILLGLLALAFLFLILNSRGKSQLPPGPRPLPFLGNLLQLRSQDMLTSLTKLSKE 136
Query: 418 YGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERW 597
YGSV TV+ G + VVL GY+AVKEAL+DQG++F GRG P+ + G G+ FSNG+RW
Sbjct: 137 YGSVYTVHLGPRRVVVLSGYQAVKEALVDQGEDFSGRGDYPVFFNFTKGNGIAFSNGDRW 196
Query: 598 KQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICS 777
K +RRFS+ LRNFGMGKRS+EER+ EE FL+ ELRKTE +PFDPTF+LS + N+ICS
Sbjct: 197 KVLRRFSVQILRNFGMGKRSIEERILEEGSFLLAELRKTEGKPFDPTFVLSRSVSNIICS 256
Query: 778 ILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDC 957
++F RF YD+E L+++ L+N NF+ ++ PW ++YN++P ++ +PG HR +
Sbjct: 257 VIFGSRFDYDDERLLTIIRLINDNFQIMSGPWGELYNIFPSLLDWIPGPHRRLFQNFGCM 316
Query: 958 RSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTE 1137
+ I V++H+ S + P+D+IDCFL+KM QEKQ+P S FH+ L+ + +N + GTE
Sbjct: 317 KDLIARSVRDHQDSLDPRCPRDFIDCFLNKMAQEKQDPHSHFHMDTLLMTTHNLIFGGTE 376
Query: 1138 TTTSTLRYGLLLLMNTLRFQPKFMKKL 1218
T +TLR+ L+LM + Q + +++
Sbjct: 377 TVGTTLRHAFLVLMKYPKVQARVQEEI 403
>ref|NP_001041492.1| hypothetical protein LOC484493 [Canis lupus familiaris].
Length = 494
Score = 277 bits (709), Expect(2) = 4e-79
Identities = 142/314 (45%), Positives = 208/314 (66%)
Frame = +1
Query: 238 GITTLALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQ 417
GI +AL+ C+T +V +SV ++ N +QLN++ + S K++K+
Sbjct: 5 GILLVALLTCLTVMVLMSVRRQWKLLEKLPPGPTPLPFIGNYLQLNIQQMSDSFMKISKR 64
Query: 418 YGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERW 597
YG V T++ G + VVL GYEAVKEAL+DQ +EF GRG D GYG+ FSNGER
Sbjct: 65 YGPVFTIHLGPRRVVVLCGYEAVKEALVDQAEEFSGRGAQATFDTLFKGYGVTFSNGERA 124
Query: 598 KQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICS 777
KQ+RRFS+ TLR+FG+GKR +EER+QEEA FL+E L+ T DPTF LS NVI S
Sbjct: 125 KQLRRFSITTLRDFGVGKRGIEERIQEEAGFLIEALQGTRGAFIDPTFFLSRTVSNVISS 184
Query: 778 ILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDC 957
I+F DRF Y+++ FLSL+ ++ +F+ + Q+ ++ +IK+LPG + K L+
Sbjct: 185 IVFGDRFDYEDKEFLSLLRMMLGSFQFTATSMGQLCEMFHSVIKYLPGPQQQAIKELQGL 244
Query: 958 RSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTE 1137
FI +KV++++++ + N+P+D+ID FL +M++E+ NP++EFHLKNL+ + N AGTE
Sbjct: 245 EDFITKKVEQNQRTLDPNSPRDFIDSFLIRMQEEQNNPNTEFHLKNLVLTTLNLFFAGTE 304
Query: 1138 TTTSTLRYGLLLLM 1179
T ++TLRYG LLLM
Sbjct: 305 TVSTTLRYGFLLLM 318
Score = 37.4 bits (85), Expect(2) = 4e-79
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+HP+V AKVHE+IDRVIG+ P
Sbjct: 319 KHPDVEAKVHEEIDRVIGKNRQP 341
>ref|NP_001003339.1| cytochrome P450 2E1 [Canis lupus familiaris].
Length = 494
Score = 278 bits (711), Expect = 8e-75
Identities = 140/331 (42%), Positives = 211/331 (63%)
Frame = +1
Query: 226 MELLGITTLALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSK 405
M LGIT +AL+V + L+ +S+WK+ + R N++Q+++K++P SL+K
Sbjct: 1 MAALGIT-VALLVWMATLMLISIWKQIYSRWKLPPGPFPLPIIGNILQVDIKNVPKSLAK 59
Query: 406 LAKQYGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSN 585
LA+QYG V T+Y GSQ VVLHGY+AVKE L+D ++ GRG + + G+ F+N
Sbjct: 60 LAEQYGPVFTLYLGSQRTVVLHGYKAVKEVLLDHKNDLSGRGEV-FAFQSHKDRGITFNN 118
Query: 586 GERWKQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCN 765
G WK RR SL TLR++GMGKR EER+Q E FL+E LR T QPFDPTF+L AP N
Sbjct: 119 GPGWKDTRRLSLSTLRDYGMGKRGNEERIQREIPFLLEALRGTRGQPFDPTFLLGFAPFN 178
Query: 766 VICSILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKR 945
VI ILF+ F Y ++T L + L N NF L++ W+Q+YN++P + +LPG HR +
Sbjct: 179 VIADILFHKHFDYSDQTGLRIQKLFNENFHLLSTGWLQLYNIFPSYLHYLPGSHRKVLRN 238
Query: 946 LKDCRSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVV 1125
+ + + + LE+VKEH++S + +D+ DC L ++++E+ + + L N+ + +
Sbjct: 239 VAELKDYSLERVKEHQESLDPTCSRDFTDCLLQELQKERYGTEPWYTLDNIAVTVADLFF 298
Query: 1126 AGTETTTSTLRYGLLLLMNTLRFQPKFMKKL 1218
AGTETT++TLRYGLL+LM + K +++
Sbjct: 299 AGTETTSTTLRYGLLILMKYPEVEEKLHEEI 329
>ref|XP_855605.1| PREDICTED: cytochrome P450 2B11 [Canis familiaris].
Length = 494
Score = 266 bits (679), Expect = 4e-71
Identities = 130/287 (45%), Positives = 192/287 (66%)
Frame = +1
Query: 358 NLMQLNLKDIPASLSKLAKQYGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGII 537
N +Q++ K + S +L ++YG V TVY G + V+L G +A++EAL+D + F GRG I
Sbjct: 42 NFLQMDRKGLLKSFLRLQEKYGDVFTVYLGPRRTVMLCGIDAIREALVDNAEAFSGRGKI 101
Query: 538 PIIDDTQGGYGLIFSNGERWKQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTE 717
+++ GYG++F+NGERWK +RRFSL T+R+FGMGKRS+EER+QEEAQ LVEELRKTE
Sbjct: 102 AVVEPVFQGYGVVFANGERWKTLRRFSLATMRDFGMGKRSVEERIQEEAQCLVEELRKTE 161
Query: 718 AQPFDPTFILSCAPCNVICSILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWP 897
DPTF N+ICSI+F RF Y + FL LMNL +F ++S Q++ L+
Sbjct: 162 GVLQDPTFFFHSMTANIICSIVFGKRFGYKDPEFLRLMNLFYVSFALISSFSSQMFELFH 221
Query: 898 QIIKHLPGEHRAFSKRLKDCRSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDS 1077
+K+ PG HR L++ ++FI V++H ++ + + P+D+ID +L +M++EK P S
Sbjct: 222 SFLKYFPGTHRQVYNNLQEIKAFIARMVEKHRETLDPSAPRDFIDAYLIRMDKEKAEPSS 281
Query: 1078 EFHLKNLINSGNNFVVAGTETTTSTLRYGLLLLMNTLRFQPKFMKKL 1218
EFH +NLI+S + AGTETT++TLRYG LL++ + K++
Sbjct: 282 EFHHRNLIDSALSLFFAGTETTSTTLRYGFLLMLKYPHIAERIYKEI 328
>ref|NP_001006653.1| cytochrome P450 2B11 [Canis lupus familiaris].
Length = 494
Score = 265 bits (676), Expect = 9e-71
Identities = 129/287 (44%), Positives = 192/287 (66%)
Frame = +1
Query: 358 NLMQLNLKDIPASLSKLAKQYGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGII 537
N +Q++ K + S +L ++YG V TVY G + V+L G +A++EAL+D + F GRG I
Sbjct: 42 NFLQMDRKGLLKSFLRLQEKYGDVFTVYLGPRRTVMLCGIDAIREALVDNAEAFSGRGKI 101
Query: 538 PIIDDTQGGYGLIFSNGERWKQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTE 717
+++ GYG++F+NGERWK +RRFSL T+R+FGMGKRS+EER+QEEAQ LVEELRKTE
Sbjct: 102 AVVEPVFQGYGVVFANGERWKTLRRFSLATMRDFGMGKRSVEERIQEEAQCLVEELRKTE 161
Query: 718 AQPFDPTFILSCAPCNVICSILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWP 897
DPTF N+ICSI+F RF Y + FL LMNL +F ++S Q++ L+
Sbjct: 162 GVLQDPTFFFHSMTANIICSIVFGKRFGYKDPEFLRLMNLFYVSFALISSFSSQMFELFH 221
Query: 898 QIIKHLPGEHRAFSKRLKDCRSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDS 1077
+K+ PG HR L++ ++FI V++H ++ + + P+D+ID +L +M++EK P S
Sbjct: 222 SFLKYFPGTHRQVYNNLQEIKAFIARMVEKHRETLDPSAPRDFIDAYLIRMDKEKAEPSS 281
Query: 1078 EFHLKNLINSGNNFVVAGTETTTSTLRYGLLLLMNTLRFQPKFMKKL 1218
EFH +NLI++ + AGTETT++TLRYG LL++ + K++
Sbjct: 282 EFHHRNLIDTALSLFFAGTETTSTTLRYGFLLMLKYPHIAERIYKEI 328
>ref|XP_533661.2| PREDICTED: similar to cytochrome P450 monooxygenase CYP2T1 [Canis
familiaris].
Length = 495
Score = 244 bits (624), Expect = 1e-64
Identities = 119/293 (40%), Positives = 190/293 (64%)
Frame = +1
Query: 358 NLMQLNLKDIPASLSKLAKQYGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGII 537
NL+QL + + +L +L+ ++G V TV G +PAVVL GY A+++AL+ Q D F GRG +
Sbjct: 46 NLLQLESRRLDRALMELSGRWGPVFTVRLGPRPAVVLCGYSALRDALVLQADAFSGRGAM 105
Query: 538 PIIDDTQGGYGLIFSNGERWKQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTE 717
+ + G G++FSNG RW+ +R F+L L+ FG+G R++EER+ EEA L+ E + T
Sbjct: 106 AVFERFTHGNGIVFSNGLRWRTLRNFALGALKEFGLGTRTIEERILEEAACLLGEFQATT 165
Query: 718 AQPFDPTFILSCAPCNVICSILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWP 897
PFDP +L A NVICS++F +R+ Y++ F L++L N NFR ++S W ++YN++P
Sbjct: 166 GAPFDPRRLLGNAVSNVICSVVFGNRYGYEDPEFQRLLDLFNDNFRIMSSRWGEMYNVFP 225
Query: 898 QIIKHLPGEHRAFSKRLKDCRSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDS 1077
++ LPG H + + R FI E+++ H+++ P+D+IDCFL +M++E+ +P+S
Sbjct: 226 TLLDWLPGPHHRIFQNFTELRVFISEQIQRHQQTRQPGKPRDFIDCFLDQMDKEQNDPES 285
Query: 1078 EFHLKNLINSGNNFVVAGTETTTSTLRYGLLLLMNTLRFQPKFMKKLTV*LDA 1236
F + L+ + +N GTETT++TLRYGLL+L+ P+ K+ LDA
Sbjct: 286 HFQEETLVMTTHNLFFGGTETTSTTLRYGLLILLK----YPEVAAKVQAELDA 334
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 50,211,482
Number of extensions: 1365542
Number of successful extensions: 4807
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 4773
Number of HSP's successfully gapped: 25
Length of query: 418
Length of database: 18,874,504
Length adjustment: 105
Effective length of query: 313
Effective length of database: 15,374,224
Effective search space: 4812132112
Effective search space used: 4812132112
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002434
(1255 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_000762.2| cytochrome P450 2C9 [Homo sapiens]. 368 e-105
Alignment gi|NP_000760.1| cytochrome P450 2C19 [Homo sapiens]. 364 e-104
Alignment gi|NP_000763.1| cytochrome P450 2C18 isoform 1 [Homo sapiens]. 363 e-102
Alignment gi|NP_000761.3| cytochrome P450 2C8 isoform a [Homo sapiens]. 354 e-101
Alignment gi|NP_001185784.1| cytochrome P450 2C8 isoform b [Homo sapiens]. 312 1e-88
Alignment gi|NP_001185782.1| cytochrome P450 2C8 isoform b [Homo sapiens]. 312 1e-88
Alignment gi|NP_000764.1| cytochrome P450 2E1 [Homo sapiens]. 308 7e-84
Alignment gi|NP_000765.2| cytochrome P450 2F1 [Homo sapiens]. 283 2e-76
Alignment gi|NP_000757.2| cytochrome P450 2A13 [Homo sapiens]. 282 5e-76
Alignment gi|NP_001185783.1| cytochrome P450 2C8 isoform c [Homo sapiens]. 269 1e-75
>ref|NP_000762.2| cytochrome P450 2C9 [Homo sapiens].
Length = 490
Score = 368 bits (944), Expect(2) = e-105
Identities = 177/310 (57%), Positives = 234/310 (75%)
Frame = +1
Query: 250 LALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSV 429
+ L++C++CL+ LS+W+++ R N++Q+ +KDI SL+ L+K YG V
Sbjct: 5 VVLVLCLSCLLLLSLWRQSSGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPV 64
Query: 430 CTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIR 609
T+YFG +P VVLHGYEAVKEALID G+EF GRGI P+ + G+G++FSNG++WK+IR
Sbjct: 65 FTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIR 124
Query: 610 RFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFN 789
RFSLMTLRNFGMGKRS+E+RVQEEA+ LVEELRKT+A P DPTFIL CAPCNVICSI+F+
Sbjct: 125 RFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFH 184
Query: 790 DRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFI 969
RF Y ++ FL+LM LN N + L+SPWIQI N + II + PG H K + +S+I
Sbjct: 185 KRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYI 244
Query: 970 LEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTS 1149
LEKVKEH++S ++NNPQD+IDCFL KME+EK N SEF +++L N+ + AGTETT++
Sbjct: 245 LEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTST 304
Query: 1150 TLRYGLLLLM 1179
TLRY LLLL+
Sbjct: 305 TLRYALLLLL 314
Score = 35.4 bits (80), Expect(2) = e-105
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+HPEV+AKV E+I+RVIGR P
Sbjct: 315 KHPEVTAKVQEEIERVIGRNRSP 337
>ref|NP_000760.1| cytochrome P450 2C19 [Homo sapiens].
Length = 490
Score = 364 bits (934), Expect(2) = e-104
Identities = 175/310 (56%), Positives = 232/310 (74%)
Frame = +1
Query: 250 LALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSV 429
+ L++C++CL+ LS+W+++ R N++Q+++KD+ SL+ L+K YG V
Sbjct: 5 VVLVLCLSCLLLLSIWRQSSGRGKLPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPV 64
Query: 430 CTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIR 609
T+YFG + VVLHGYE VKEALID G+EF GRG P+ + G+G++FSNG+RWK+IR
Sbjct: 65 FTLYFGLERMVVLHGYEVVKEALIDLGEEFSGRGHFPLAERANRGFGIVFSNGKRWKEIR 124
Query: 610 RFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFN 789
RFSLMTLRNFGMGKRS+E+RVQEEA+ LVEELRKT+A P DPTFIL CAPCNVICSI+F
Sbjct: 125 RFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFQ 184
Query: 790 DRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFI 969
RF Y ++ FL+LM LN N R +++PWIQI N +P II + PG H K L S I
Sbjct: 185 KRFDYKDQQFLNLMEKLNENIRIVSTPWIQICNNFPTIIDYFPGTHNKLLKNLAFMESDI 244
Query: 970 LEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTS 1149
LEKVKEH++S ++NNP+D+IDCFL KME+EKQN SEF ++NL+ + + + AGTETT++
Sbjct: 245 LEKVKEHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTST 304
Query: 1150 TLRYGLLLLM 1179
TLRY LLLL+
Sbjct: 305 TLRYALLLLL 314
Score = 35.4 bits (80), Expect(2) = e-104
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+HPEV+AKV E+I+RVIGR P
Sbjct: 315 KHPEVTAKVQEEIERVIGRNRSP 337
>ref|NP_000763.1| cytochrome P450 2C18 isoform 1 [Homo sapiens].
Length = 490
Score = 363 bits (932), Expect(2) = e-102
Identities = 172/310 (55%), Positives = 232/310 (74%)
Frame = +1
Query: 250 LALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSV 429
+AL++C++CL LS+W+++ R N++QL++KD+ SL+ +K YG V
Sbjct: 5 VALVLCLSCLFLLSLWRQSSGRGRLPSGPTPLPIIGNILQLDVKDMSKSLTNFSKVYGPV 64
Query: 430 CTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIR 609
TVYFG +P VVLHGYEAVKEALID G+EF GRG P+ + G G++FSNG+RWK+IR
Sbjct: 65 FTVYFGLKPIVVLHGYEAVKEALIDHGEEFSGRGSFPVAEKVNKGLGILFSNGKRWKEIR 124
Query: 610 RFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFN 789
RF LMTLRNFGMGKRS+E+RVQEEA+ LVEELRKT A P DPTFIL CAPCNVICS++F+
Sbjct: 125 RFCLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFH 184
Query: 790 DRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFI 969
DRF Y ++ FL+LM N N R L+SPWIQ+ N +P +I +LPG H ++ +S++
Sbjct: 185 DRFDYKDQRFLNLMEKFNENLRILSSPWIQVCNNFPALIDYLPGSHNKIAENFAYIKSYV 244
Query: 970 LEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTS 1149
LE++KEH++S ++N+ +D+IDCFL KMEQEK N SEF +++LI + + AGTETT++
Sbjct: 245 LERIKEHQESLDMNSARDFIDCFLIKMEQEKHNQQSEFTVESLIATVTDMFGAGTETTST 304
Query: 1150 TLRYGLLLLM 1179
TLRYGLLLL+
Sbjct: 305 TLRYGLLLLL 314
Score = 29.6 bits (65), Expect(2) = e-102
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
++PEV+AKV E+I+ V+GR P
Sbjct: 315 KYPEVTAKVQEEIECVVGRNRSP 337
>ref|NP_000761.3| cytochrome P450 2C8 isoform a [Homo sapiens].
Length = 490
Score = 354 bits (909), Expect(2) = e-101
Identities = 174/310 (56%), Positives = 224/310 (72%)
Frame = +1
Query: 250 LALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSV 429
+ L++C++ ++ S+W+++ +R N++Q+++KDI S + +K YG V
Sbjct: 5 VVLVLCLSFMLLFSLWRQSCRRRKLPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPV 64
Query: 430 CTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIR 609
TVYFG P VV HGYEAVKEALID G+EF GRG PI G G+I SNG+RWK+IR
Sbjct: 65 FTVYFGMNPIVVFHGYEAVKEALIDNGEEFSGRGNSPISQRITKGLGIISSNGKRWKEIR 124
Query: 610 RFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFN 789
RFSL TLRNFGMGKRS+E+RVQEEA LVEELRKT+A P DPTFIL CAPCNVICS++F
Sbjct: 125 RFSLTTLRNFGMGKRSIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQ 184
Query: 790 DRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFI 969
RF Y ++ FL+LM N NFR LNSPWIQ+ N +P +I PG H K + RS+I
Sbjct: 185 KRFDYKDQNFLTLMKRFNENFRILNSPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYI 244
Query: 970 LEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTS 1149
EKVKEH+ S ++NNP+D+IDCFL KMEQEK N SEF+++NL+ + + VAGTETT++
Sbjct: 245 REKVKEHQASLDVNNPRDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTST 304
Query: 1150 TLRYGLLLLM 1179
TLRYGLLLL+
Sbjct: 305 TLRYGLLLLL 314
Score = 34.3 bits (77), Expect(2) = e-101
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+HPEV+AKV E+ID VIGR P
Sbjct: 315 KHPEVTAKVQEEIDHVIGRHRSP 337
>ref|NP_001185784.1| cytochrome P450 2C8 isoform b [Homo sapiens].
Length = 420
Score = 312 bits (800), Expect(2) = 1e-88
Identities = 154/242 (63%), Positives = 185/242 (76%)
Frame = +1
Query: 454 PAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIRRFSLMTLR 633
P VV HGYEAVKEALID G+EF GRG PI G G+I SNG+RWK+IRRFSL TLR
Sbjct: 3 PIVVFHGYEAVKEALIDNGEEFSGRGNSPISQRITKGLGIISSNGKRWKEIRRFSLTTLR 62
Query: 634 NFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFNDRFHYDNE 813
NFGMGKRS+E+RVQEEA LVEELRKT+A P DPTFIL CAPCNVICS++F RF Y ++
Sbjct: 63 NFGMGKRSIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQ 122
Query: 814 TFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFILEKVKEHE 993
FL+LM N NFR LNSPWIQ+ N +P +I PG H K + RS+I EKVKEH+
Sbjct: 123 NFLTLMKRFNENFRILNSPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIREKVKEHQ 182
Query: 994 KSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTSTLRYGLLL 1173
S ++NNP+D+IDCFL KMEQEK N SEF+++NL+ + + VAGTETT++TLRYGLLL
Sbjct: 183 ASLDVNNPRDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLL 242
Query: 1174 LM 1179
L+
Sbjct: 243 LL 244
Score = 34.3 bits (77), Expect(2) = 1e-88
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+HPEV+AKV E+ID VIGR P
Sbjct: 245 KHPEVTAKVQEEIDHVIGRHRSP 267
>ref|NP_001185782.1| cytochrome P450 2C8 isoform b [Homo sapiens].
Length = 420
Score = 312 bits (800), Expect(2) = 1e-88
Identities = 154/242 (63%), Positives = 185/242 (76%)
Frame = +1
Query: 454 PAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIRRFSLMTLR 633
P VV HGYEAVKEALID G+EF GRG PI G G+I SNG+RWK+IRRFSL TLR
Sbjct: 3 PIVVFHGYEAVKEALIDNGEEFSGRGNSPISQRITKGLGIISSNGKRWKEIRRFSLTTLR 62
Query: 634 NFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFNDRFHYDNE 813
NFGMGKRS+E+RVQEEA LVEELRKT+A P DPTFIL CAPCNVICS++F RF Y ++
Sbjct: 63 NFGMGKRSIEDRVQEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDYKDQ 122
Query: 814 TFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFILEKVKEHE 993
FL+LM N NFR LNSPWIQ+ N +P +I PG H K + RS+I EKVKEH+
Sbjct: 123 NFLTLMKRFNENFRILNSPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIREKVKEHQ 182
Query: 994 KSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTSTLRYGLLL 1173
S ++NNP+D+IDCFL KMEQEK N SEF+++NL+ + + VAGTETT++TLRYGLLL
Sbjct: 183 ASLDVNNPRDFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTLRYGLLL 242
Query: 1174 LM 1179
L+
Sbjct: 243 LL 244
Score = 34.3 bits (77), Expect(2) = 1e-88
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+HPEV+AKV E+ID VIGR P
Sbjct: 245 KHPEVTAKVQEEIDHVIGRHRSP 267
>ref|NP_000764.1| cytochrome P450 2E1 [Homo sapiens].
Length = 493
Score = 308 bits (789), Expect = 7e-84
Identities = 154/331 (46%), Positives = 216/331 (65%)
Frame = +1
Query: 226 MELLGITTLALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSK 405
M LG+T +AL+V L+ +S+W++ H NL QL LK+IP S ++
Sbjct: 1 MSALGVT-VALLVWAAFLLLVSMWRQVHSSWNLPPGPFPLPIIGNLFQLELKNIPKSFTR 59
Query: 406 LAKQYGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSN 585
LA+++G V T+Y GSQ VV+HGY+AVKEAL+D DEF GRG +P G+IF+N
Sbjct: 60 LAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFH-AHRDRGIIFNN 118
Query: 586 GERWKQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCN 765
G WK IRRFSL TLRN+GMGK+ E R+Q EA FL+E LRKT+ QPFDPTF++ CAPCN
Sbjct: 119 GPTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCN 178
Query: 766 VICSILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKR 945
VI ILF F Y++E FL LM L N NF L++PW+Q+YN +P + +LPG HR K
Sbjct: 179 VIADILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKN 238
Query: 946 LKDCRSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVV 1125
+ + + ++ E+VKEH +S + N P+D DC L +ME+EK + + + + + + +
Sbjct: 239 VAEVKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFF 298
Query: 1126 AGTETTTSTLRYGLLLLMNTLRFQPKFMKKL 1218
AGTETT++TLRYGLL+LM + K +++
Sbjct: 299 AGTETTSTTLRYGLLILMKYPEIEEKLHEEI 329
>ref|NP_000765.2| cytochrome P450 2F1 [Homo sapiens].
Length = 491
Score = 283 bits (725), Expect = 2e-76
Identities = 136/322 (42%), Positives = 212/322 (65%)
Frame = +1
Query: 253 ALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSVC 432
A+++ + LV L + + + NL+ L +D+ SL+KL+K+YGS+
Sbjct: 7 AILLLLLALVCLLLTLSSRDKGKLPPGPRPLSILGNLLLLCSQDMLTSLTKLSKEYGSMY 66
Query: 433 TVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIRR 612
TV+ G + VVL GY+AVKEAL+DQG+EF GRG P + G G+ FS+G+RWK +R+
Sbjct: 67 TVHLGPRRVVVLSGYQAVKEALVDQGEEFSGRGDYPAFFNFTKGNGIAFSSGDRWKVLRQ 126
Query: 613 FSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFND 792
FS+ LRNFGMGKRS+EER+ EE FL+ ELRKTE +PFDPTF+LS + N+ICS+LF
Sbjct: 127 FSIQILRNFGMGKRSIEERILEEGSFLLAELRKTEGEPFDPTFVLSRSVSNIICSVLFGS 186
Query: 793 RFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFIL 972
RF YD+E L+++ L+N NF+ ++SPW ++Y+++P ++ +PG H+ + K R I
Sbjct: 187 RFDYDDERLLTIIRLINDNFQIMSSPWGELYDIFPSLLDWVPGPHQRIFQNFKCLRDLIA 246
Query: 973 EKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTST 1152
V +H+ S + +P+D+I CFL+KM +EK++P S FH+ L+ + +N + GT+T ++T
Sbjct: 247 HSVHDHQASLDPRSPRDFIQCFLTKMAEEKEDPLSHFHMDTLLMTTHNLLFGGTKTVSTT 306
Query: 1153 LRYGLLLLMNTLRFQPKFMKKL 1218
L + L LM + Q + +++
Sbjct: 307 LHHAFLALMKYPKVQARVQEEI 328
>ref|NP_000757.2| cytochrome P450 2A13 [Homo sapiens].
Length = 494
Score = 282 bits (721), Expect = 5e-76
Identities = 141/327 (43%), Positives = 214/327 (65%)
Frame = +1
Query: 238 GITTLALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQ 417
G+ + L+ C+T +V +SVW++ R N +QLN + + SL K++++
Sbjct: 5 GLLLVTLLACLTVMVLMSVWRQRKSRGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISER 64
Query: 418 YGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERW 597
YG V T++ G + VVL G++AVKEAL+DQ +EF GRG D GYG+ FSNGER
Sbjct: 65 YGPVFTIHLGPRRVVVLCGHDAVKEALVDQAEEFSGRGEQATFDWLFKGYGVAFSNGERA 124
Query: 598 KQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICS 777
KQ+RRFS+ TLR FG+GKR +EER+QEEA FL++ LR T DPTF LS NVI S
Sbjct: 125 KQLRRFSIATLRGFGVGKRGIEERIQEEAGFLIDALRGTHGANIDPTFFLSRTVSNVISS 184
Query: 778 ILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDC 957
I+F DRF Y+++ FLSL+ ++ +F+ + Q+Y ++ ++KHLPG + K L+
Sbjct: 185 IVFGDRFDYEDKEFLSLLRMMLGSFQFTATSTGQLYEMFSSVMKHLPGPQQQAFKELQGL 244
Query: 958 RSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTE 1137
FI +KV+ ++++ + N+P+D+ID FL +M++E++NP++EF+LKNL+ + N AGTE
Sbjct: 245 EDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTE 304
Query: 1138 TTTSTLRYGLLLLMNTLRFQPKFMKKL 1218
T ++TLRYG LLLM + K +++
Sbjct: 305 TVSTTLRYGFLLLMKHPEVEAKVHEEI 331
>ref|NP_001185783.1| cytochrome P450 2C8 isoform c [Homo sapiens].
Length = 388
Score = 269 bits (687), Expect(2) = 1e-75
Identities = 130/204 (63%), Positives = 160/204 (78%)
Frame = +1
Query: 568 GLIFSNGERWKQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFIL 747
G+I SNG+RWK+IRRFSL TLRNFGMGKRS+E+RVQEEA LVEELRKT+A P DPTFIL
Sbjct: 9 GIISSNGKRWKEIRRFSLTTLRNFGMGKRSIEDRVQEEAHCLVEELRKTKASPCDPTFIL 68
Query: 748 SCAPCNVICSILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEH 927
CAPCNVICS++F RF Y ++ FL+LM N NFR LNSPWIQ+ N +P +I PG H
Sbjct: 69 GCAPCNVICSVVFQKRFDYKDQNFLTLMKRFNENFRILNSPWIQVCNNFPLLIDCFPGTH 128
Query: 928 RAFSKRLKDCRSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINS 1107
K + RS+I EKVKEH+ S ++NNP+D+IDCFL KMEQEK N SEF+++NL+ +
Sbjct: 129 NKVLKNVALTRSYIREKVKEHQASLDVNNPRDFIDCFLIKMEQEKDNQKSEFNIENLVGT 188
Query: 1108 GNNFVVAGTETTTSTLRYGLLLLM 1179
+ VAGTETT++TLRYGLLLL+
Sbjct: 189 VADLFVAGTETTSTTLRYGLLLLL 212
Score = 34.3 bits (77), Expect(2) = 1e-75
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+HPEV+AKV E+ID VIGR P
Sbjct: 213 KHPEVTAKVQEEIDHVIGRHRSP 235
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 49,264,543
Number of extensions: 1348747
Number of successful extensions: 4916
Number of sequences better than 1.0e-05: 28
Number of HSP's gapped: 4893
Number of HSP's successfully gapped: 42
Length of query: 418
Length of database: 18,297,164
Length adjustment: 105
Effective length of query: 313
Effective length of database: 14,835,944
Effective search space: 4643650472
Effective search space used: 4643650472
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002434
(1255 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001161377.1| cytochrome P450, family 2, subfamily c, poly... 436 e-122
Alignment gi|NP_001001446.3| cytochrome P450, family 2, subfamily c, poly... 436 e-122
Alignment gi|NP_082467.2| cytochrome P450, family 2, subfamily c, polypep... 354 e-100
Alignment gi|NP_082365.1| cytochrome P450 2C55 [Mus musculus]. 348 8e-98
Alignment gi|NP_001011707.1| cytochrome P450, family 2, subfamily c, poly... 350 1e-96
Alignment gi|NP_034133.2| cytochrome P450 2C39 [Mus musculus]. 338 1e-95
Alignment gi|NP_031841.3| cytochrome P450 2C29 [Mus musculus]. 334 8e-95
Alignment gi|NP_034132.2| cytochrome P450 2C38 [Mus musculus]. 332 2e-93
Alignment gi|NP_034131.2| cytochrome P450 2C37 [Mus musculus]. 321 2e-89
Alignment gi|NP_598905.2| cytochrome P450 2C50 isoform 1 [Mus musculus]. 314 3e-87
>ref|NP_001161377.1| cytochrome P450, family 2, subfamily c, polypeptide 44 isoform 2 [Mus
musculus].
Length = 456
Score = 436 bits (1120), Expect = e-122
Identities = 216/331 (65%), Positives = 265/331 (80%)
Frame = +1
Query: 226 MELLGITTLALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSK 405
MELLG+ TLAL+V V L LSVW K N++QL+LKDIPASLSK
Sbjct: 1 MELLGLPTLALLVLVMSLSLLSVWTKMRTGGRLPPGPTPLPIIGNILQLDLKDIPASLSK 60
Query: 406 LAKQYGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSN 585
LAK+YG V T+YFGS P VVLHGY+ VKEAL++QGDEFLGRG +PII+D+Q G+G++FS
Sbjct: 61 LAKEYGPVYTLYFGSWPTVVLHGYDVVKEALLNQGDEFLGRGPLPIIEDSQKGHGIVFSE 120
Query: 586 GERWKQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCN 765
GERWK +RRFSLMTL+NFGMGKRSLEERVQEEA+ LVEEL KTEAQPFDPTFIL+CAPCN
Sbjct: 121 GERWKLLRRFSLMTLKNFGMGKRSLEERVQEEARCLVEELHKTEAQPFDPTFILACAPCN 180
Query: 766 VICSILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKR 945
VICSILFN+RF Y+++TFL+LM+LLN NF LNS WIQ+YNLWP I+K++PG+HR FSKR
Sbjct: 181 VICSILFNERFPYNDKTFLNLMDLLNKNFYQLNSIWIQMYNLWPTIMKYIPGKHREFSKR 240
Query: 946 LKDCRSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVV 1125
L ++FILEKVKEH++S + NP+DYIDCFLSK+E+EK N S+F+L+NL G+N
Sbjct: 241 LGGVKNFILEKVKEHQESLDPANPRDYIDCFLSKIEEEKHNLKSDFNLENLAICGSNLFT 300
Query: 1126 AGTETTTSTLRYGLLLLMNTLRFQPKFMKKL 1218
AGTETT++TLR+GLLLL+ Q K ++L
Sbjct: 301 AGTETTSTTLRFGLLLLVKHPEVQAKVHEEL 331
>ref|NP_001001446.3| cytochrome P450, family 2, subfamily c, polypeptide 44 isoform 1 [Mus
musculus].
Length = 494
Score = 436 bits (1120), Expect = e-122
Identities = 216/331 (65%), Positives = 265/331 (80%)
Frame = +1
Query: 226 MELLGITTLALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSK 405
MELLG+ TLAL+V V L LSVW K N++QL+LKDIPASLSK
Sbjct: 1 MELLGLPTLALLVLVMSLSLLSVWTKMRTGGRLPPGPTPLPIIGNILQLDLKDIPASLSK 60
Query: 406 LAKQYGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSN 585
LAK+YG V T+YFGS P VVLHGY+ VKEAL++QGDEFLGRG +PII+D+Q G+G++FS
Sbjct: 61 LAKEYGPVYTLYFGSWPTVVLHGYDVVKEALLNQGDEFLGRGPLPIIEDSQKGHGIVFSE 120
Query: 586 GERWKQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCN 765
GERWK +RRFSLMTL+NFGMGKRSLEERVQEEA+ LVEEL KTEAQPFDPTFIL+CAPCN
Sbjct: 121 GERWKLLRRFSLMTLKNFGMGKRSLEERVQEEARCLVEELHKTEAQPFDPTFILACAPCN 180
Query: 766 VICSILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKR 945
VICSILFN+RF Y+++TFL+LM+LLN NF LNS WIQ+YNLWP I+K++PG+HR FSKR
Sbjct: 181 VICSILFNERFPYNDKTFLNLMDLLNKNFYQLNSIWIQMYNLWPTIMKYIPGKHREFSKR 240
Query: 946 LKDCRSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVV 1125
L ++FILEKVKEH++S + NP+DYIDCFLSK+E+EK N S+F+L+NL G+N
Sbjct: 241 LGGVKNFILEKVKEHQESLDPANPRDYIDCFLSKIEEEKHNLKSDFNLENLAICGSNLFT 300
Query: 1126 AGTETTTSTLRYGLLLLMNTLRFQPKFMKKL 1218
AGTETT++TLR+GLLLL+ Q K ++L
Sbjct: 301 AGTETTSTTLRFGLLLLVKHPEVQAKVHEEL 331
>ref|NP_082467.2| cytochrome P450, family 2, subfamily c, polypeptide 65 [Mus
musculus].
Length = 490
Score = 354 bits (908), Expect(2) = e-100
Identities = 166/308 (53%), Positives = 224/308 (72%)
Frame = +1
Query: 256 LMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSVCT 435
L + +TCL+ LS+W++N +R N++QL+LKDI SL +K YG V T
Sbjct: 7 LGLLLTCLLLLSLWRQNSQRRNLPPGPTPLPIIGNILQLDLKDISKSLRNFSKVYGPVFT 66
Query: 436 VYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIRRF 615
+Y G PAVVLHGYEAVKEA D G+EF GRG+ P+ D + G++FS+G WK++RRF
Sbjct: 67 LYLGRNPAVVLHGYEAVKEAFTDHGEEFAGRGVFPVFDKFKKNCGVVFSSGRTWKEMRRF 126
Query: 616 SLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFNDR 795
SLMTLRNFGMG+RS+E+R+QEEA+ LV+ELRKT+ +P DPTFIL CAPCNVICSI+F +R
Sbjct: 127 SLMTLRNFGMGRRSIEDRIQEEARCLVDELRKTKGEPCDPTFILGCAPCNVICSIVFQNR 186
Query: 796 FHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFILE 975
F Y ++ FL+ +++LN N L+SPWIQI N +P +I +LPG HR K + L
Sbjct: 187 FDYKDQEFLTFLDILNENVEILSSPWIQICNNFPAVIDYLPGRHRKLHKNFAFAEHYFLS 246
Query: 976 KVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTSTL 1155
KVK+H++S ++NNP+D+IDCFL KMEQEK NP +EF +NL+ + ++ AGTETT++TL
Sbjct: 247 KVKQHQESLDINNPRDFIDCFLIKMEQEKHNPKTEFTCENLVFTASDLFAAGTETTSTTL 306
Query: 1156 RYGLLLLM 1179
RY LLLL+
Sbjct: 307 RYSLLLLL 314
Score = 30.8 bits (68), Expect(2) = e-100
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
++PEV+AKV E+ID VIGR P
Sbjct: 315 KYPEVTAKVQEEIDCVIGRHRSP 337
>ref|NP_082365.1| cytochrome P450 2C55 [Mus musculus].
Length = 490
Score = 348 bits (892), Expect(2) = 8e-98
Identities = 166/310 (53%), Positives = 226/310 (72%)
Frame = +1
Query: 250 LALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSV 429
L L++ ++CL+ LS+W++N R N++Q+++K+I S + +K YG V
Sbjct: 5 LVLVLTLSCLLLLSLWRQNSGRGKLPPGPTPFPIIGNILQIDIKNISKSFNYFSKVYGPV 64
Query: 430 CTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIR 609
T+YFGS+P VV+HGYEAVKEAL D G+EF GRG I + G+IFSNG +WK++R
Sbjct: 65 FTLYFGSKPTVVVHGYEAVKEALDDLGEEFSGRGSFQIFERINNDLGVIFSNGTKWKELR 124
Query: 610 RFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFN 789
RFS+MTLR+FGMGKRS+E+R+QEEA LVEELRK DPTFILSCAP NVICS++F+
Sbjct: 125 RFSIMTLRSFGMGKRSIEDRIQEEASCLVEELRKANGSLCDPTFILSCAPSNVICSVIFH 184
Query: 790 DRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFI 969
+RF Y +E FL+LM LN NF+ LNSPW+Q+YN P +I +LPG H K + +S+I
Sbjct: 185 NRFDYKDEKFLNLMERLNENFKILNSPWMQVYNALPTLINYLPGSHNKVIKNFTEIKSYI 244
Query: 970 LEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTS 1149
L +VKEH+++ +++NP+D+IDCFL KMEQEK NP SEF +++L+ + + VAGTETT
Sbjct: 245 LGRVKEHQETLDMDNPRDFIDCFLIKMEQEKHNPHSEFTIESLMATVTDIFVAGTETTNI 304
Query: 1150 TLRYGLLLLM 1179
TLRYGLLLL+
Sbjct: 305 TLRYGLLLLL 314
Score = 28.9 bits (63), Expect(2) = 8e-98
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
+H EV+AKV +ID VIGR P
Sbjct: 315 KHTEVTAKVQAEIDHVIGRHRSP 337
>ref|NP_001011707.1| cytochrome P450, family 2, subfamily c, polypeptide 66 [Mus
musculus].
Length = 490
Score = 350 bits (899), Expect = 1e-96
Identities = 174/332 (52%), Positives = 231/332 (69%)
Frame = +1
Query: 256 LMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSVCT 435
L + +TCL+ LS+WK+N +R N++QL+LKDI SL +K YG V T
Sbjct: 7 LGLLLTCLLLLSLWKQNSQRRNLPPGPTPLPIIGNILQLDLKDISKSLRNFSKVYGPVFT 66
Query: 436 VYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIRRF 615
+Y G +PAVVLHGY+AVKEALID G+EF GRG P+ D G++FS+G WK++RRF
Sbjct: 67 LYLGKKPAVVLHGYKAVKEALIDHGEEFAGRGTFPVADKFIRRCGVVFSSGRTWKEMRRF 126
Query: 616 SLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFNDR 795
SLMTLRNFGMGKRS+E+RVQEEA+ LV+ELRKT+ P DPTFIL CAPCNVICSI+F +R
Sbjct: 127 SLMTLRNFGMGKRSIEDRVQEEARCLVDELRKTKGVPCDPTFILGCAPCNVICSIVFQNR 186
Query: 796 FHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFILE 975
F Y ++ FL+ +++LN N L+SPWIQ+ N +P II +LPG HR K + + L
Sbjct: 187 FDYKDQEFLTFIDILNENVEILSSPWIQVCNNFPAIIDYLPGRHRKLLKNFDFAKHYFLA 246
Query: 976 KVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTSTL 1155
KV +H++S ++NNP+D+IDCFL KMEQEK NP +EF +NLI + ++ AGTETT++TL
Sbjct: 247 KVIQHKESLDINNPRDFIDCFLIKMEQEKHNPKTEFTCENLIFTASDLFAAGTETTSTTL 306
Query: 1156 RYGLLLLMNTLRFQPKFMKKLTV*LDAPTSLH 1251
RY LLLL+ P+ K+ +D H
Sbjct: 307 RYSLLLLLK----YPEVTAKVQAEIDCVIGRH 334
>ref|NP_034133.2| cytochrome P450 2C39 [Mus musculus].
Length = 490
Score = 338 bits (868), Expect(2) = 1e-95
Identities = 163/308 (52%), Positives = 221/308 (71%)
Frame = +1
Query: 256 LMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSVCT 435
L++ ++ L+ LS+W+++ R N +Q+++K++ SL+ +K YG V T
Sbjct: 7 LVLTLSSLILLSLWRQSCGRGSLPPGPTPFPIIGNFLQIDIKNVSQSLTNFSKAYGPVFT 66
Query: 436 VYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIRRF 615
+Y GS+P VVLHGYEAVKEALID G+EF RG IP+++ G G++FSNG RWK+IRRF
Sbjct: 67 LYLGSRPTVVLHGYEAVKEALIDHGEEFSDRGSIPMVEKINNGLGIVFSNGNRWKEIRRF 126
Query: 616 SLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFNDR 795
+L TLRN GMGKR++E+RVQEEAQ LVEELRKT+ P DPTFILSCAPCNVICSI+F DR
Sbjct: 127 TLTTLRNLGMGKRNIEDRVQEEAQCLVEELRKTKGSPCDPTFILSCAPCNVICSIIFQDR 186
Query: 796 FHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFILE 975
F Y ++ FL LM LN N + L+SPW+Q+ N +P +I + PG H K +K RS++LE
Sbjct: 187 FDYKDKDFLMLMEKLNENVKILSSPWLQVCNNFPLLIDYCPGSHHKVLKNVKYIRSYLLE 246
Query: 976 KVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTSTL 1155
K+KEH++S ++ NP+D+ID +L K +Q +EF L+NL + NN AGTETT++TL
Sbjct: 247 KIKEHQESLDVTNPRDFIDYYLIKQKQANHIQQAEFSLENLACTINNLFAAGTETTSTTL 306
Query: 1156 RYGLLLLM 1179
RY LLLLM
Sbjct: 307 RYALLLLM 314
Score = 30.8 bits (68), Expect(2) = 1e-95
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
++P+V+AKV E+ID VIGR P
Sbjct: 315 KYPDVTAKVQEEIDHVIGRHRSP 337
>ref|NP_031841.3| cytochrome P450 2C29 [Mus musculus].
Length = 490
Score = 334 bits (857), Expect(2) = 8e-95
Identities = 158/308 (51%), Positives = 222/308 (72%)
Frame = +1
Query: 256 LMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSVCT 435
L + ++CL+ LS+W+++ R N +Q+++K+I S + +K YG V T
Sbjct: 7 LALTLSCLILLSLWRQSSGRGKLPPGPTPLPIIGNFLQIDVKNISQSFTNFSKAYGPVFT 66
Query: 436 VYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIRRF 615
+Y GS+P V+LHGYEAVKEALID+G+EF GRG P+ + G+G++FSNG RWK++RRF
Sbjct: 67 LYLGSKPTVILHGYEAVKEALIDRGEEFAGRGSFPMAEKIIKGFGVVFSNGNRWKEMRRF 126
Query: 616 SLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFNDR 795
+LMTLRN GMGKR++E+RVQEEAQ LVEELRKT+ P DPTFILSCAPCNVICSI+F +R
Sbjct: 127 TLMTLRNLGMGKRNIEDRVQEEAQCLVEELRKTKGSPCDPTFILSCAPCNVICSIIFQNR 186
Query: 796 FHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFILE 975
F Y ++ FL LM+ +N N + L+SPW+Q+ N +P +I + PG H K +S++LE
Sbjct: 187 FDYKDKEFLILMDKINENVKILSSPWLQVCNSFPSLIDYCPGSHHKIVKNFNYLKSYLLE 246
Query: 976 KVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTSTL 1155
K+KEH++S ++ NP+D+ID +L K +Q SEF L+NL ++ N+ AGTETT++TL
Sbjct: 247 KIKEHKESLDVTNPRDFIDYYLIKQKQVNHIEQSEFSLENLASTINDLFGAGTETTSTTL 306
Query: 1156 RYGLLLLM 1179
RY LLLL+
Sbjct: 307 RYALLLLL 314
Score = 32.3 bits (72), Expect(2) = 8e-95
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
++P+V+AKV E+IDRV+GR P
Sbjct: 315 KYPDVTAKVQEEIDRVVGRHRSP 337
>ref|NP_034132.2| cytochrome P450 2C38 [Mus musculus].
Length = 490
Score = 332 bits (851), Expect(2) = 2e-93
Identities = 162/308 (52%), Positives = 217/308 (70%)
Frame = +1
Query: 256 LMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSVCT 435
L++ ++ L+ LS+W++ +R N +Q+++K+ SL+ +K YG V T
Sbjct: 7 LVLTLSSLILLSLWRQRSRRGRLPPGPTPFPIIGNFLQIDVKNFNQSLTNFSKTYGPVFT 66
Query: 436 VYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIRRF 615
+Y GS+P VVLHGYEAVKEALID G+EF GR IP+ + G G+ FSNG WK+ RRF
Sbjct: 67 LYLGSRPIVVLHGYEAVKEALIDHGEEFSGRENIPMSEKINNGLGITFSNGNSWKETRRF 126
Query: 616 SLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFNDR 795
+LMTLRN GMGKR++E+RV+EEAQ LVEELRKT+ P DPTFILSCAPCNVICSI+F DR
Sbjct: 127 TLMTLRNLGMGKRNIEDRVREEAQCLVEELRKTKGSPCDPTFILSCAPCNVICSIIFQDR 186
Query: 796 FHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFILE 975
F Y ++ FL LM LN N + L+SPW+Q+ N +P +I + PG H K K RS++LE
Sbjct: 187 FDYKDKDFLMLMKKLNENVKILSSPWLQVCNNFPLLIDYCPGSHHKVLKNFKYIRSYLLE 246
Query: 976 KVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTSTL 1155
KVKEH++S ++ NP+D+ID FL K +Q +E+ L+NL+ + NN AGTETT++TL
Sbjct: 247 KVKEHQESLDVTNPRDFIDYFLIKQKQANHIEQAEYSLENLVCTINNLFAAGTETTSTTL 306
Query: 1156 RYGLLLLM 1179
RY LLLLM
Sbjct: 307 RYALLLLM 314
Score = 30.4 bits (67), Expect(2) = 2e-93
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
++P+V+AKV E+ID V+GR P
Sbjct: 315 KYPDVTAKVQEEIDHVVGRHRSP 337
>ref|NP_034131.2| cytochrome P450 2C37 [Mus musculus].
Length = 490
Score = 321 bits (823), Expect(2) = 2e-89
Identities = 158/310 (50%), Positives = 211/310 (68%)
Frame = +1
Query: 250 LALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSV 429
L L++ ++CL LS+W+++ +R N++Q+++KDI S + L+K YG V
Sbjct: 5 LVLVLTLSCLFLLSLWRQSSERGKLPPGPTPLPIIGNILQIDVKDICQSFTNLSKVYGPV 64
Query: 430 CTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIR 609
T+Y G +P VVLHGYEAVKEAL+D G+EF GRG P+ D G GL FS G WK R
Sbjct: 65 YTLYLGRKPTVVLHGYEAVKEALVDHGEEFAGRGRFPVFDKATNGMGLAFSKGNVWKNTR 124
Query: 610 RFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFN 789
RFSLMTLRN GMGKRS+E+RVQEEA+ LVEELRKT P DPTFIL CAPCNVICSI+F
Sbjct: 125 RFSLMTLRNLGMGKRSIEDRVQEEARCLVEELRKTNGSPCDPTFILGCAPCNVICSIIFQ 184
Query: 790 DRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFI 969
DRF Y + FL+LM LN + L+SPW+QI N +P ++ + PG H+ F K ++F+
Sbjct: 185 DRFDYKDRDFLNLMEKLNEITKILSSPWLQICNTYPALLDYCPGSHKQFFKNYASIKNFL 244
Query: 970 LEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTS 1149
LEK+KEHE+S ++ P+D+ID FL QE N + L++L + + AGTETT++
Sbjct: 245 LEKIKEHEESLDVTIPRDFIDYFLINGGQEDGNQPLQNRLEHLAITVTDLFSAGTETTST 304
Query: 1150 TLRYGLLLLM 1179
TLRY +LLL+
Sbjct: 305 TLRYAILLLL 314
Score = 27.3 bits (59), Expect(2) = 2e-89
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
++P V+AKV E+I+ VIG+ P
Sbjct: 315 KYPHVTAKVQEEIEHVIGKHRSP 337
>ref|NP_598905.2| cytochrome P450 2C50 isoform 1 [Mus musculus].
Length = 490
Score = 314 bits (805), Expect(2) = 3e-87
Identities = 155/310 (50%), Positives = 209/310 (67%)
Frame = +1
Query: 250 LALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSV 429
L L+ ++CL LS+W+++ +R N++Q+N+KDI S + L+K YG V
Sbjct: 5 LVLVFTLSCLFLLSLWRQSSERGKLPPGPTPLPIIGNILQINVKDICQSFTNLSKVYGPV 64
Query: 430 CTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIR 609
T+Y G +P VVLHGYEAVKEAL+D G+EF GRG +P+ D G G+IFS G WK R
Sbjct: 65 YTLYLGRKPTVVLHGYEAVKEALVDHGEEFAGRGRLPVFDKATNGMGIIFSKGNVWKNTR 124
Query: 610 RFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFN 789
RFSL TLRN GMGKRS+E+RVQEEA+ LVEELRKT P DPTFIL CAPCNVICSI+F
Sbjct: 125 RFSLTTLRNLGMGKRSIEDRVQEEARCLVEELRKTNGSPCDPTFILGCAPCNVICSIIFQ 184
Query: 790 DRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFI 969
DRF Y + FL+LM LN + +++PW+Q+ N +P ++ + PG H K ++F+
Sbjct: 185 DRFDYKDRDFLNLMEKLNEITKIMSTPWLQVCNTFPVLLDYCPGSHNKVFKNYACIKNFL 244
Query: 970 LEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTS 1149
LEK+KEHE+S ++ P+D+ID FL QE N + L++L + + AGTETT++
Sbjct: 245 LEKIKEHEESLDVTIPRDFIDYFLINGGQENGNYPLKNRLEHLAITVTDLFSAGTETTST 304
Query: 1150 TLRYGLLLLM 1179
TLRY LLLL+
Sbjct: 305 TLRYALLLLL 314
Score = 26.9 bits (58), Expect(2) = 3e-87
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGRTNVP 1247
++P V+AKV E+I+ VIG+ P
Sbjct: 315 KYPHVTAKVQEEIEHVIGKHRRP 337
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 41,911,325
Number of extensions: 1138177
Number of successful extensions: 4387
Number of sequences better than 1.0e-05: 62
Number of HSP's gapped: 4320
Number of HSP's successfully gapped: 93
Length of query: 418
Length of database: 15,617,559
Length adjustment: 104
Effective length of query: 314
Effective length of database: 12,493,815
Effective search space: 3923057910
Effective search space used: 3923057910
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002434
(1255 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999579.1| cytochrome P450 2C33 [Sus scrofa]. 599 e-172
Alignment gi|XP_003359352.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome P... 369 e-102
Alignment gi|NP_001161307.1| cytochrome P450 2C42 [Sus scrofa]. 353 e-101
Alignment gi|NP_999585.1| cytochrome P450 2C49 [Sus scrofa]. 365 e-101
Alignment gi|XP_003127188.2| PREDICTED: cytochrome P450 2G1-like isoform ... 304 6e-83
Alignment gi|NP_999586.1| cytochrome P450 2E1 [Sus scrofa]. 292 3e-79
Alignment gi|NP_999582.1| cytochrome P450 2A19 [Sus scrofa]. 275 2e-77
Alignment gi|NP_999578.1| cytochrome P450 2B22 [Sus scrofa]. 263 2e-70
Alignment gi|XP_003360779.1| PREDICTED: cytochrome P450 2J2-like, partial... 214 8e-56
Alignment gi|XP_003128009.2| PREDICTED: cytochrome P450 2J2-like, partial... 211 9e-55
>ref|NP_999579.1| cytochrome P450 2C33 [Sus scrofa].
Length = 494
Score = 599 bits (1545), Expect = e-172
Identities = 295/331 (89%), Positives = 304/331 (91%)
Frame = +1
Query: 226 MELLGITTLALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSK 405
MELLGITTLALMVCVTCLVFLSVWKKNHKR NLMQLNLKDIPASLSK
Sbjct: 1 MELLGITTLALMVCVTCLVFLSVWKKNHKRRRLPPGPTPLPIIGNLMQLNLKDIPASLSK 60
Query: 406 LAKQYGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSN 585
LAKQYG VCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGL+FSN
Sbjct: 61 LAKQYGPVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLVFSN 120
Query: 586 GERWKQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCN 765
GERWKQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCN
Sbjct: 121 GERWKQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCN 180
Query: 766 VICSILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKR 945
VICSILFNDRFHYDNETFLSLMNLLNANFR ++SPWIQIYNLWPQIIKHLPGEHRAFSKR
Sbjct: 181 VICSILFNDRFHYDNETFLSLMNLLNANFRQISSPWIQIYNLWPQIIKHLPGEHRAFSKR 240
Query: 946 LKDCRSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVV 1125
LKDCRSFILEKVKEH+KSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHL+NLINSG+N
Sbjct: 241 LKDCRSFILEKVKEHQKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLENLINSGSNLFA 300
Query: 1126 AGTETTTSTLRYGLLLLMNTLRFQPKFMKKL 1218
AGTETTTSTLRYGLLLLM Q K +++
Sbjct: 301 AGTETTTSTLRYGLLLLMKHPEVQAKVHEEI 331
>ref|XP_003359352.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome P450 2C18 [Sus scrofa].
Length = 490
Score = 369 bits (946), Expect = e-102
Identities = 182/323 (56%), Positives = 237/323 (73%)
Frame = +1
Query: 250 LALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSV 429
+ L++C++CL+ LS+WK+N + N++QLN+KDI SLS L+K YG V
Sbjct: 5 VVLVLCLSCLLLLSLWKQNSGKGRLPPGPTPLPILGNILQLNVKDISKSLSNLSKVYGPV 64
Query: 430 CTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIR 609
TVY G +PAVVLHGYEA+KEALID G+EF GRG +P+ + G+G+IFS+G+RWK+IR
Sbjct: 65 FTVYLGLKPAVVLHGYEAMKEALIDGGEEFSGRGHLPMAERVNKGHGIIFSSGKRWKEIR 124
Query: 610 RFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFN 789
RFSLMTLRNFGMGKRS+EERVQEEA+ LVEELRKT A P+DPTF+L CAPC VICSI+F
Sbjct: 125 RFSLMTLRNFGMGKRSIEERVQEEARCLVEELRKTNASPWDPTFLLGCAPCKVICSIIFR 184
Query: 790 DRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFI 969
+RF Y + FL+L+ LN NFR L+SPWIQ+ N +P +I +LPG H K +S+I
Sbjct: 185 NRFDYTDPNFLTLLEKLNENFRILSSPWIQVCNNFPALIDYLPGSHNKVFKNSAYVKSYI 244
Query: 970 LEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTS 1149
LEKVKEH+ S ++N+P+D+IDCFL KMEQEK N F +NLI + ++ AGTETT++
Sbjct: 245 LEKVKEHQASLDVNDPRDFIDCFLIKMEQEKHNHQVAFTFENLIATISDLFGAGTETTST 304
Query: 1150 TLRYGLLLLMNTLRFQPKFMKKL 1218
TLRYGLLLL+ K K++
Sbjct: 305 TLRYGLLLLLKHPDVTAKVQKEI 327
>ref|NP_001161307.1| cytochrome P450 2C42 [Sus scrofa].
Length = 490
Score = 353 bits (905), Expect(2) = e-101
Identities = 169/310 (54%), Positives = 231/310 (74%)
Frame = +1
Query: 250 LALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSV 429
+ L++ ++CL+ LS+WK++ + N++QL++K+I SLS LA+ YG V
Sbjct: 5 VVLVLSLSCLLLLSLWKESSGKGELPPGPTPLPILGNILQLDVKNISKSLSNLAEVYGPV 64
Query: 430 CTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIR 609
TVYFG +P VVL+GYEAVKEAL+D G+EF GRG P+ + T G G+IFSNG++WK+IR
Sbjct: 65 FTVYFGIKPTVVLYGYEAVKEALVDLGEEFSGRGHFPVAEKTHKGLGIIFSNGKKWKEIR 124
Query: 610 RFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFN 789
RFSLMTLRN GMGKRS+E+R+QEEA LVEELRKT A P DPTFIL CAPCNVICSI+F
Sbjct: 125 RFSLMTLRNLGMGKRSIEDRIQEEACCLVEELRKTNASPCDPTFILDCAPCNVICSIIFQ 184
Query: 790 DRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFI 969
+RF Y ++ FL+L+ + N L+SPWIQ+ N +P +I + PG H K + +S++
Sbjct: 185 NRFDYTDQDFLTLLEKFHENLNILSSPWIQVCNNFPALIDYSPGIHNKLLKNIAYLKSYV 244
Query: 970 LEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTS 1149
L+KVKEH++S ++NNP+D+IDCFL KMEQEK N SE+ ++NLI + ++ AGTETT++
Sbjct: 245 LKKVKEHQESLDINNPRDFIDCFLIKMEQEKHNQQSEYTIENLIATVSDMFSAGTETTST 304
Query: 1150 TLRYGLLLLM 1179
T+RYGLLLL+
Sbjct: 305 TMRYGLLLLL 314
Score = 35.0 bits (79), Expect(2) = e-101
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +3
Query: 1179 EHPEVSAKVHEKIDRVIGR 1235
+HPEV+AKV E+IDRVIGR
Sbjct: 315 KHPEVTAKVQEEIDRVIGR 333
>ref|NP_999585.1| cytochrome P450 2C49 [Sus scrofa].
Length = 490
Score = 365 bits (937), Expect = e-101
Identities = 181/323 (56%), Positives = 235/323 (72%)
Frame = +1
Query: 250 LALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQYGSV 429
+ L++C++CL+ LS+WK+N + N++QL++KDI SLS L+K YG V
Sbjct: 5 VVLVLCLSCLLLLSLWKQNSGKGRLPPGPTPLSILGNILQLDVKDISKSLSNLSKVYGPV 64
Query: 430 CTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERWKQIR 609
TVYFG +PAVVLHGYEAVKEALID G+EF GRG P+ + G+G+IFS+G+RWK+ R
Sbjct: 65 FTVYFGLKPAVVLHGYEAVKEALIDGGEEFSGRGHFPMAERVNKGHGIIFSSGKRWKETR 124
Query: 610 RFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICSILFN 789
RFSLMTLRNFGMGKRS+EERVQEEA+ LVEELRKT A P DPTF+L CAPCNVICSI+F+
Sbjct: 125 RFSLMTLRNFGMGKRSIEERVQEEARCLVEELRKTNASPCDPTFLLGCAPCNVICSIIFH 184
Query: 790 DRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDCRSFI 969
+RF Y + FL+L+ LN NFR L+SPW+Q+ N +P +I +LPG H K +S+I
Sbjct: 185 NRFDYTDPNFLTLLEKLNENFRILSSPWMQVCNNFPALIDYLPGSHNKVLKNSAYVKSYI 244
Query: 970 LEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTETTTS 1149
LEKVKEH+ S ++ +P+D+IDCFL KMEQEK N F +NLI + + AGTETT++
Sbjct: 245 LEKVKEHQASLDVKDPRDFIDCFLIKMEQEKHNHQVAFTFENLIATITDLFGAGTETTST 304
Query: 1150 TLRYGLLLLMNTLRFQPKFMKKL 1218
TLRYGLLLL+ K K++
Sbjct: 305 TLRYGLLLLLKHPDVTAKVQKEI 327
>ref|XP_003127188.2| PREDICTED: cytochrome P450 2G1-like isoform 1 [Sus scrofa].
Length = 549
Score = 304 bits (779), Expect = 6e-83
Identities = 151/331 (45%), Positives = 219/331 (66%)
Frame = +1
Query: 226 MELLGITTLALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSK 405
MEL G T+ L +C++CL+ L WK+ K NL+Q+ S K
Sbjct: 1 MELGGAFTIFLALCLSCLLILIAWKRISKGGKLPPGPTPIPFLGNLLQVRTDATFQSFMK 60
Query: 406 LAKQYGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSN 585
L ++YG V TVY G +P VVL G+EAVKEALID+ DEF GRG + ++ G+G+ +N
Sbjct: 61 LREKYGPVFTVYMGPRPVVVLCGHEAVKEALIDRADEFSGRGELASVERNFQGHGVALAN 120
Query: 586 GERWKQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCN 765
G+RW+ +RRFSL LR+FGMGKRS+EER+QEEA FL++ELRKT+ P +PTF LS N
Sbjct: 121 GDRWRILRRFSLTILRDFGMGKRSIEERIQEEAGFLLQELRKTKGAPIEPTFFLSRTVSN 180
Query: 766 VICSILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKR 945
VI S++F RF Y+++ FL L+ ++N +F +++PW Q+Y+++ I+++LPG H
Sbjct: 181 VISSVVFGSRFDYEDKQFLKLLQMINQSFIEMSTPWAQLYDMYSGIMQYLPGRHNRIYYL 240
Query: 946 LKDCRSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVV 1125
+++ + FI +VK +E S + NP+D+IDCFL KM Q+K NP +EF+LKNL+ + N
Sbjct: 241 IEELKDFIASRVKINEASLDPQNPRDFIDCFLIKMHQDKDNPHTEFNLKNLVLTTLNLFF 300
Query: 1126 AGTETTTSTLRYGLLLLMNTLRFQPKFMKKL 1218
AGTET +STLRYGLLL+M + K +++
Sbjct: 301 AGTETVSSTLRYGLLLMMKHPEVEAKIHEEI 331
>ref|NP_999586.1| cytochrome P450 2E1 [Sus scrofa].
Length = 495
Score = 292 bits (747), Expect = 3e-79
Identities = 150/331 (45%), Positives = 212/331 (64%)
Frame = +1
Query: 226 MELLGITTLALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSK 405
M LGIT +AL+V + L+ +S+WK H N+ QL+LK+IP S +
Sbjct: 1 MTALGIT-VALLVWLVTLLLISIWKHIHSSWKLPPGPFPLPIVGNIFQLDLKNIPKSFTM 59
Query: 406 LAKQYGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSN 585
LA++YG V TVY GS+ VVLHGY+AVKE L+ +EF GRG IP G+IF+N
Sbjct: 60 LAERYGPVFTVYLGSRRIVVLHGYKAVKEVLLHYKNEFSGRGEIPTFQ-VHKDKGVIFNN 118
Query: 586 GERWKQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCN 765
G W+ RRFSL TLR+FGMGK+ E+R+Q EA FL+E LRKT QPFDPTF++ CAPCN
Sbjct: 119 GPTWRDTRRFSLTTLRDFGMGKQGNEQRIQREAHFLLEALRKTHGQPFDPTFLIGCAPCN 178
Query: 766 VICSILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKR 945
VI ILF F Y+++T L LM++ N NF L++ WIQ+YN + +++LPG HR K
Sbjct: 179 VISDILFRQHFDYNDKTCLRLMSMFNENFYLLSTGWIQLYNNFSGYLRYLPGSHRKLMKN 238
Query: 946 LKDCRSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVV 1125
+ + + + LE+VK+H S + P+D+ D L +ME+EK + + + L N+ + +
Sbjct: 239 ISEIKDYALERVKDHRDSLEPSCPRDFTDTLLMEMEKEKYSAEPIYTLDNIAVTVADMFF 298
Query: 1126 AGTETTTSTLRYGLLLLMNTLRFQPKFMKKL 1218
AGTETT++TLRYGLL+LM + K +++
Sbjct: 299 AGTETTSTTLRYGLLILMKYPEVEEKLHEEI 329
>ref|NP_999582.1| cytochrome P450 2A19 [Sus scrofa].
Length = 494
Score = 275 bits (703), Expect(2) = 2e-77
Identities = 139/314 (44%), Positives = 207/314 (65%)
Frame = +1
Query: 238 GITTLALMVCVTCLVFLSVWKKNHKRXXXXXXXXXXXXXXNLMQLNLKDIPASLSKLAKQ 417
G+ +AL+ C+T +V +SVW++ + N +QLN + + SL K++++
Sbjct: 5 GLLLVALLTCLTIMVLMSVWRQRKLQGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISQR 64
Query: 418 YGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGERW 597
YG V TV+ G + VVL GY+AVKEAL+DQ +EF GRG D GYG+ FSNGER
Sbjct: 65 YGPVFTVHLGPRRIVVLCGYDAVKEALVDQAEEFSGRGEQATFDWLFKGYGVAFSNGERA 124
Query: 598 KQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVICS 777
KQ+RRFS+ TLR+FG+GKR +EER+QEEA L+E R T DPT+ LS NVI S
Sbjct: 125 KQLRRFSITTLRDFGVGKRGIEERIQEEAGHLIEAFRGTRGAFIDPTYFLSRTVSNVISS 184
Query: 778 ILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLKDC 957
I+F DRF Y+++ FL+L+ ++ +F+ + Q+Y ++ ++KHLPG + K L+
Sbjct: 185 IVFGDRFDYEDKEFLALLRMMLGSFQFTATSTGQLYEMFYSVMKHLPGPQQQAFKDLQGL 244
Query: 958 RSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAGTE 1137
FI KV+ ++++ + N+P+D+ID FL +M++EK+NPD+EF+ KNL+ + N AGTE
Sbjct: 245 EDFIARKVEHNQRTLDPNSPRDFIDSFLIRMQEEKKNPDTEFYWKNLVLTTLNLFFAGTE 304
Query: 1138 TTTSTLRYGLLLLM 1179
T ++T+RYG LLLM
Sbjct: 305 TVSTTMRYGFLLLM 318
Score = 33.1 bits (74), Expect(2) = 2e-77
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 1185 PEVSAKVHEKIDRVIGR 1235
P+V AKVHE+IDRVIGR
Sbjct: 321 PDVEAKVHEEIDRVIGR 337
>ref|NP_999578.1| cytochrome P450 2B22 [Sus scrofa].
Length = 493
Score = 263 bits (672), Expect = 2e-70
Identities = 130/287 (45%), Positives = 194/287 (67%)
Frame = +1
Query: 358 NLMQLNLKDIPASLSKLAKQYGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGII 537
N++Q++ K S L ++YG V TVY G +P V++ G EA++EAL+DQ + F GRG I
Sbjct: 41 NILQMDRKGFLKSFQALRERYGDVFTVYLGPRPVVMICGTEAIREALVDQAEAFSGRGKI 100
Query: 538 PIIDDTQGGYGLIFSNGERWKQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTE 717
+++ GYG+IFSNGERWK +RRFSL T+R+FG+GKRS+EER+QEEAQ LVEELRK++
Sbjct: 101 AVVEPIFQGYGVIFSNGERWKTLRRFSLATMRDFGLGKRSVEERIQEEAQCLVEELRKSQ 160
Query: 718 AQPFDPTFILSCAPCNVICSILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWP 897
DPT+ + N+ICSI+F RF Y + FL L++LL F ++S Q++ L+
Sbjct: 161 GALQDPTYYFHSSTANIICSIVFGKRFAYRDPEFLQLLDLLFQTFLLISSFPSQLFELYS 220
Query: 898 QIIKHLPGEHRAFSKRLKDCRSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDS 1077
+K+ PG HR K L+ +FI V++H ++ + ++P+D ID +L +M++EK NP+S
Sbjct: 221 AFLKYFPGSHRQIYKNLQQVNAFIGRSVEKHRETLDPSDPRDLIDSYLLRMDKEKSNPNS 280
Query: 1078 EFHLKNLINSGNNFVVAGTETTTSTLRYGLLLLMNTLRFQPKFMKKL 1218
EFH +NLI + + AGTETT++TLRYG LL++ + K++
Sbjct: 281 EFHEQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHITERIHKEI 327
>ref|XP_003360779.1| PREDICTED: cytochrome P450 2J2-like, partial [Sus scrofa].
Length = 363
Score = 214 bits (545), Expect = 8e-56
Identities = 113/292 (38%), Positives = 171/292 (58%)
Frame = +1
Query: 358 NLMQLNLKDIPASLSKLAKQYGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGII 537
NL L+ + SL + K+YG++ ++ + AVV+ G +KE L+ Q +F R I+
Sbjct: 25 NLFHLDFEKAHLSLQRFVKKYGNIFSLDLCALSAVVVTGLPLIKEVLVHQNQKFANRPIL 84
Query: 538 PIIDDTQGGYGLIFSNGERWKQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTE 717
PI D G++ S+G+ WK+ RRF+L TLRNFG+GK+SLEER+QEEAQ+L + + +
Sbjct: 85 PIQDRVFKNKGVVTSSGQVWKEQRRFTLTTLRNFGLGKKSLEERIQEEAQYLTQAIGEEN 144
Query: 718 AQPFDPTFILSCAPCNVICSILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWP 897
QPF+P F +S A N+ICSI F RF Y ++ F L+ LL W Q++N++P
Sbjct: 145 GQPFNPQFKISNAVSNIICSITFGKRFDYQDDQFQELLRLLREVTHLQTLLWCQLFNVFP 204
Query: 898 QIIKHLPGEHRAFSKRLKDCRSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDS 1077
+I+K LPG H+ + FI ++ H + N +D+ID +L ++E+ K N S
Sbjct: 205 RIMKFLPGPHQTLFSDWEKLEMFIARVIENHRRDWNPAEARDFIDAYLQEIEKNKGNATS 264
Query: 1078 EFHLKNLINSGNNFVVAGTETTTSTLRYGLLLLMNTLRFQPKFMKKLTV*LD 1233
FH +NLI S + + AGT+TT TLR+GLL + Q K ++ LD
Sbjct: 265 SFHEENLICSTLDLLFAGTDTTLITLRWGLLYMALHPEIQEKVQAEIDRVLD 316
>ref|XP_003128009.2| PREDICTED: cytochrome P450 2J2-like, partial [Sus scrofa].
Length = 432
Score = 211 bits (536), Expect = 9e-55
Identities = 108/269 (40%), Positives = 164/269 (60%)
Frame = +1
Query: 412 KQYGSVCTVYFGSQPAVVLHGYEAVKEALIDQGDEFLGRGIIPIIDDTQGGYGLIFSNGE 591
K+YG+V ++ FG+ +VV+ G +KEA + Q F R I+PI G++ SNG+
Sbjct: 3 KKYGNVFSLDFGALSSVVITGLPFIKEAFVHQDKNFSNRPIVPIQQRVFKDKGVVMSNGQ 62
Query: 592 RWKQIRRFSLMTLRNFGMGKRSLEERVQEEAQFLVEELRKTEAQPFDPTFILSCAPCNVI 771
WK+ RRF+L TLRNFG+GK+SLEER+QEEAQ+L++ + + QPF+P F ++ A N+I
Sbjct: 63 VWKEQRRFALTTLRNFGLGKKSLEERIQEEAQYLIQAIGEENGQPFNPHFKINNAVSNII 122
Query: 772 CSILFNDRFHYDNETFLSLMNLLNANFRHLNSPWIQIYNLWPQIIKHLPGEHRAFSKRLK 951
CSI F +RF Y + F L+ LL+ S W QIYN+ P I+K LPG H+ +
Sbjct: 123 CSITFGERFDYQDNQFQELLKLLDEVMCLQTSVWCQIYNIIPWIMKFLPGPHQTLFSNWE 182
Query: 952 DCRSFILEKVKEHEKSPNLNNPQDYIDCFLSKMEQEKQNPDSEFHLKNLINSGNNFVVAG 1131
+ F+ ++ H + N +D+I+ +L ++E+ K + S F +NLI S + VAG
Sbjct: 183 KLKMFVAHVIENHRRDWNPAEARDFIEAYLQEIEKHKGDATSSFQEENLICSTLDLFVAG 242
Query: 1132 TETTTSTLRYGLLLLMNTLRFQPKFMKKL 1218
TETT++TLR+GLL + Q K ++
Sbjct: 243 TETTSTTLRWGLLYMALYPEIQEKVQAEI 271
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 30,894,936
Number of extensions: 845149
Number of successful extensions: 3226
Number of sequences better than 1.0e-05: 26
Number of HSP's gapped: 3187
Number of HSP's successfully gapped: 34
Length of query: 418
Length of database: 11,343,932
Length adjustment: 102
Effective length of query: 316
Effective length of database: 8,804,438
Effective search space: 2782202408
Effective search space used: 2782202408
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-002434
(1255 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr14 688 0.0
gb|GL896193.2| Sus scrofa unplaced genomic scaffold ChrUScaf4077 62 8e-07
>Sscrofa_Chr14
|| Length = 153851969
Score = 688 bits (347), Expect = 0.0
Identities = 386/405 (95%)
Strand = Plus / Plus
Query: 1 gatttcatcagtgagggacaggaatgatacgaatccttcctaatgtcaagcttcaggaag 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 120804267 gatttcatcagtgagggacaggaacgatacgaatccttcctaatgtcaagcttcaggaag 120804326
Query: 61 gtacatagagtccaatccaatttcaggtttgttctctnnnnnnnnnnnnnnnnnntgcct 120
||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 120804327 gtacatagagtccaatccaatttcaggtttgttctctcccccaccccccaccccctgcct 120804386
Query: 121 tgtccaaggacacagactagcctttggctggcaggtcacactccacgtgtatataagact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120804387 tgtccaaggacacagactagcctttggctggcaggtcacactccacgtgtatataagact 120804446
Query: 181 ttgctaacaagcaatccagacagttactaacattgagtagctgagatggagctgctggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120804447 ttgctaacaagcaatccagacagttactaacattgagtagctgagatggagctgctggga 120804506
Query: 241 atcactacccttgctcttatggtttgtgttacttgcctggttttcctttctgtgtggaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120804507 atcactacccttgctcttatggtttgtgttacttgcctggttttcctttctgtgtggaag 120804566
Query: 301 aaaaatcacaagaggagaaggctccccccgggcccaactccccttcccatcattgggaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120804567 aaaaatcacaagaggagaaggctccccccgggcccaactccccttcccatcattgggaat 120804626
Query: 361 ctgatgcaacttaacctcaaggacatccctgcgtctctttccaag 405
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120804627 ctgatgcaacttaacctcaaggacatccctgcgtctctttccaag 120804671
Score = 571 bits (288), Expect = e-160
Identities = 288/288 (100%)
Strand = Plus / Minus
Query: 118 ccttgtccaaggacacagactagcctttggctggcaggtcacactccacgtgtatataag 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120707908 ccttgtccaaggacacagactagcctttggctggcaggtcacactccacgtgtatataag 120707849
Query: 178 actttgctaacaagcaatccagacagttactaacattgagtagctgagatggagctgctg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120707848 actttgctaacaagcaatccagacagttactaacattgagtagctgagatggagctgctg 120707789
Query: 238 ggaatcactacccttgctcttatggtttgtgttacttgcctggttttcctttctgtgtgg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120707788 ggaatcactacccttgctcttatggtttgtgttacttgcctggttttcctttctgtgtgg 120707729
Query: 298 aagaaaaatcacaagaggagaaggctccccccgggcccaactccccttcccatcattggg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120707728 aagaaaaatcacaagaggagaaggctccccccgggcccaactccccttcccatcattggg 120707669
Query: 358 aatctgatgcaacttaacctcaaggacatccctgcgtctctttccaag 405
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120707668 aatctgatgcaacttaacctcaaggacatccctgcgtctctttccaag 120707621
Score = 349 bits (176), Expect = 2e-93
Identities = 179/180 (99%)
Strand = Plus / Minus
Query: 878 agatttacaatctatggccgcaaatcataaagcatctccctggagagcacagagcatttt 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120699256 agatttacaatctatggccgcaaatcataaagcatctccctggagagcacagagcatttt 120699197
Query: 938 caaaaaggcttaaagactgtaggtcttttattctggaaaaagtaaaggagcatgaaaagt 997
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 120699196 caaaaaggcttaaagactgtaggtcttttattctggaaaaagtaaaggagcatcaaaagt 120699137
Query: 998 ccccgaatcttaacaaccctcaagactacattgactgtttcctcagcaagatggagcagg 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120699136 ccccgaatcttaacaaccctcaagactacattgactgtttcctcagcaagatggagcagg 120699077
Score = 341 bits (172), Expect = 6e-91
Identities = 178/180 (98%)
Strand = Plus / Plus
Query: 878 agatttacaatctatggccgcaaatcataaagcatctccctggagagcacagagcatttt 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120817419 agatttacaatctatggccgcaaatcataaagcatctccctggagagcacagagcatttt 120817478
Query: 938 caaaaaggcttaaagactgtaggtcttttattctggaaaaagtaaaggagcatgaaaagt 997
|||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 120817479 caaaaaggcttaaagactctaggtcttttattctggaaaaagtaaaggagcatcaaaagt 120817538
Query: 998 ccccgaatcttaacaaccctcaagactacattgactgtttcctcagcaagatggagcagg 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120817539 ccccgaatcttaacaaccctcaagactacattgactgtttcctcagcaagatggagcagg 120817598
Score = 325 bits (164), Expect = 3e-86
Identities = 174/176 (98%), Gaps = 1/176 (0%)
Strand = Plus / Minus
Query: 394 tctctttccaagttggccaaacagtacggctctgtttgtactgtgtactttggatcccag 453
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 120705852 tctctttcca-gttggccaaacagtacggccctgtttgtactgtgtactttggatcccag 120705794
Query: 454 cctgccgtggtcttacatggatatgaagcagtgaaggaagctctgattgatcagggggat 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120705793 cctgccgtggtcttacatggatatgaagcagtgaaggaagctctgattgatcagggggat 120705734
Query: 514 gaattccttggcagaggaattattccaattatcgatgatacccagggaggatatgg 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120705733 gaattccttggcagaggaattattccaattatcgatgatacccagggaggatatgg 120705678
Score = 325 bits (164), Expect = 3e-86
Identities = 174/176 (98%), Gaps = 1/176 (0%)
Strand = Plus / Plus
Query: 394 tctctttccaagttggccaaacagtacggctctgtttgtactgtgtactttggatcccag 453
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 120806445 tctctttcca-gttggccaaacagtacggccctgtttgtactgtgtactttggatcccag 120806503
Query: 454 cctgccgtggtcttacatggatatgaagcagtgaaggaagctctgattgatcagggggat 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120806504 cctgccgtggtcttacatggatatgaagcagtgaaggaagctctgattgatcagggggat 120806563
Query: 514 gaattccttggcagaggaattattccaattatcgatgatacccagggaggatatgg 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120806564 gaattccttggcagaggaattattccaattatcgatgatacccagggaggatatgg 120806619
Score = 321 bits (162), Expect = 5e-85
Identities = 162/162 (100%)
Strand = Plus / Minus
Query: 718 gctcagccctttgaccctaccttcatcctctcctgtgctccctgcaatgtgatctgctcc 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120699931 gctcagccctttgaccctaccttcatcctctcctgtgctccctgcaatgtgatctgctcc 120699872
Query: 778 atcctcttcaatgaccgtttccactacgacaatgagacatttctctctctgatgaatctg 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120699871 atcctcttcaatgaccgtttccactacgacaatgagacatttctctctctgatgaatctg 120699812
Query: 838 ttaaatgcaaattttcgtcatttaaactctccctggatccag 879
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120699811 ttaaatgcaaattttcgtcatttaaactctccctggatccag 120699770
Score = 299 bits (151), Expect = 2e-78
Identities = 151/151 (100%)
Strand = Plus / Minus
Query: 568 ggactcatattcagtaatggagagaggtggaagcaaatacggcgcttctccctcatgacc 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120700713 ggactcatattcagtaatggagagaggtggaagcaaatacggcgcttctccctcatgacc 120700654
Query: 628 ctgaggaactttgggatggggaagaggagcctcgaggagagggtccaggaggaagcccag 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120700653 ctgaggaactttgggatggggaagaggagcctcgaggagagggtccaggaggaagcccag 120700594
Query: 688 tttctggtggaggagctcaggaaaacagagg 718
|||||||||||||||||||||||||||||||
Sbjct: 120700593 tttctggtggaggagctcaggaaaacagagg 120700563
Score = 297 bits (150), Expect = 8e-78
Identities = 159/162 (98%)
Strand = Plus / Plus
Query: 718 gctcagccctttgaccctaccttcatcctctcctgtgctccctgcaatgtgatctgctcc 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120815442 gctcagccctttgaccctaccttcatcctctcctgtgctccctgcaatgtgatctgctcc 120815501
Query: 778 atcctcttcaatgaccgtttccactacgacaatgagacatttctctctctgatgaatctg 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120815502 atcctcttcaatgaccgtttccactacgacaatgagacatttctctctctgatgaatctg 120815561
Query: 838 ttaaatgcaaattttcgtcatttaaactctccctggatccag 879
|||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 120815562 ttaaatgcaaattttcgtcaaataagctctccctggatccag 120815603
Score = 291 bits (147), Expect = 5e-76
Identities = 150/151 (99%)
Strand = Plus / Plus
Query: 568 ggactcatattcagtaatggagagaggtggaagcaaatacggcgcttctccctcatgacc 627
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120814660 ggactcgtattcagtaatggagagaggtggaagcaaatacggcgcttctccctcatgacc 120814719
Query: 628 ctgaggaactttgggatggggaagaggagcctcgaggagagggtccaggaggaagcccag 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120814720 ctgaggaactttgggatggggaagaggagcctcgaggagagggtccaggaggaagcccag 120814779
Query: 688 tttctggtggaggagctcaggaaaacagagg 718
|||||||||||||||||||||||||||||||
Sbjct: 120814780 tttctggtggaggagctcaggaaaacagagg 120814810
Score = 285 bits (144), Expect = 3e-74
Identities = 165/172 (95%)
Strand = Plus / Plus
Query: 878 agatttacaatctatggccgcaaatcataaagcatctccctggagagcacagagcatttt 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120816114 agatttacaatctatggccgcaaatcataaagcatctccctggagagcacagagcatttt 120816173
Query: 938 caaaaaggcttaaagactgtaggtcttttattctggaaaaagtaaaggagcatgaaaagt 997
|||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 120816174 caaaaaggcttaaagactctaggtcttttattctgaaaaaagtaaaggagcatcaaaagt 120816233
Query: 998 ccccgaatcttaacaaccctcaagactacattgactgtttcctcagcaagat 1049
||||||||| | || |||||||||||||||||||||||||||||| ||||||
Sbjct: 120816234 ccccgaatccttaccaccctcaagactacattgactgtttcctcaccaagat 120816285
Score = 232 bits (117), Expect = 4e-58
Identities = 136/141 (96%), Gaps = 1/141 (0%)
Strand = Plus / Minus
Query: 1054 caggagaaacagaacccagactctgaatttcacctgaagaacttgataaactccggaaac 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120694237 caggagaaacagaacccagactctgaatttcacctgaagaacttgataaactccggaaca 120694178
Query: 1114 aattttgttgtagcaggaacagagacaaccactagcaccctgagatatgggctcctgctc 1173
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120694177 aatttgtttgtagcaggaacagagacaaccactagcaccctgagatatgggctcctgctc 120694118
Query: 1174 ctaatg-aacaccctgaggtt 1193
|||||| ||||||||||||||
Sbjct: 120694117 ctaatgaaacaccctgaggtt 120694097
Score = 200 bits (101), Expect = 1e-48
Identities = 147/160 (91%), Gaps = 3/160 (1%)
Strand = Plus / Plus
Query: 720 tcagccctttgaccctaccttcatcctctcctgtgctccctgcaatgtgatctgctccat 779
|||||||||||||||||| | ||| | ||||||| |||| |||||||||| ||||||||
Sbjct: 120816752 tcagccctttgaccctactt--atcttttcctgtgttccc-gcaatgtgatttgctccat 120816808
Query: 780 cctcttcaatgaccgtttccactacgacaatgagacatttctctctctgatgaatctgtt 839
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 120816809 cttcttcaatgaccgtttccactacgacaatgagacatttctctttctgatgaatctgtt 120816868
Query: 840 aaatgcaaattttcgtcatttaaactctccctggatccag 879
|||||||||||||||||| ||| ||||||||||||||||
Sbjct: 120816869 aaatgcaaattttcgtcaaataagctctccctggatccag 120816908
Score = 200 bits (101), Expect = 1e-48
Identities = 132/141 (93%), Gaps = 1/141 (0%)
Strand = Plus / Plus
Query: 1054 caggagaaacagaacccagactctgaatttcacctgaagaacttgataaactccggaaac 1113
||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 120822914 caggaaaaacagaacccagactctgaatttcacctggagaacttgataaactccggatca 120822973
Query: 1114 aattttgttgtagcaggaacagagacaaccactagcaccctgagatatgggctcctgctc 1173
||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120822974 aatttgtttgcagcaggaacagagacaaccactagcaccctgagatatgggctcctgctc 120823033
Query: 1174 ctaatg-aacaccctgaggtt 1193
|||||| ||||||||||||||
Sbjct: 120823034 ctaatgaaacaccctgaggtt 120823054
Score = 99.6 bits (50), Expect = 4e-18
Identities = 60/62 (96%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 1195 cagccaaagttcatgaaaaaattgaccgtgtgattggacgca-ccaacgtccctgcatgc 1253
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 120692037 cagccaaagttcatgaagaaattgaccgtgtgattggacgcagccaacgtccctgcatgc 120691978
Query: 1254 ag 1255
||
Sbjct: 120691977 ag 120691976
Score = 99.6 bits (50), Expect = 4e-18
Identities = 60/62 (96%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 1195 cagccaaagttcatgaaaaaattgaccgtgtgattggacgca-ccaacgtccctgcatgc 1253
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 120795377 cagccaaagttcatgaagaaattgaccgtgtgattggacgcagccaacgtccctgcatgc 120795436
Query: 1254 ag 1255
||
Sbjct: 120795437 ag 120795438
Score = 99.6 bits (50), Expect = 4e-18
Identities = 60/62 (96%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 1195 cagccaaagttcatgaaaaaattgaccgtgtgattggacgca-ccaacgtccctgcatgc 1253
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 120825110 cagccaaagttcatgaagaaattgaccgtgtgattggacgcagccaacgtccctgcatgc 120825169
Query: 1254 ag 1255
||
Sbjct: 120825170 ag 120825171
Score = 99.6 bits (50), Expect = 4e-18
Identities = 60/62 (96%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 1195 cagccaaagttcatgaaaaaattgaccgtgtgattggacgca-ccaacgtccctgcatgc 1253
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 120844144 cagccaaagttcatgaagaaattgaccgtgtgattggacgcagccaacgtccctgcatgc 120844085
Query: 1254 ag 1255
||
Sbjct: 120844084 ag 120844083
Score = 95.6 bits (48), Expect = 6e-17
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 20 aggaatgatacgaatccttcctaatgtcaagcttcaggaaggtacatagagtccaatcca 79
||||| |||| ||||||||||||||||||||||||||||||||||||| || |||| |||
Sbjct: 120708010 aggaaagatatgaatccttcctaatgtcaagcttcaggaaggtacataaagcccaaacca 120707951
Query: 80 atttcaggtttg 91
||| ||||||||
Sbjct: 120707950 attccaggtttg 120707939
Score = 85.7 bits (43), Expect = 5e-14
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 583 aatggagagaggtggaagcaaatacggcgcttctccctcatgaccctgaggaactttggg 642
|||||| |||| |||||||| || |||||||||||||||||| ||| ||||||| |||
Sbjct: 116191859 aatggaaagagatggaagcagatctggcgcttctccctcatgatgctgtggaacttgggg 116191918
Query: 643 atggggaagaggagcctcgaggagagggtccaggaggaagccc 685
||||||||||||||| | ||||| || || || ||||||||||
Sbjct: 116191919 atggggaagaggagcattgaggacagagttcaagaggaagccc 116191961
Score = 85.7 bits (43), Expect = 5e-14
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 607 cggcgcttctccctcatgaccctgaggaactttgggatggggaagaggagcctcgaggag 666
|||||||||||||||||||||||| |||| ||||||||||||||||| ||| | |||||
Sbjct: 116214256 cggcgcttctccctcatgaccctgcggaattttgggatggggaagagaagcattgaggaa 116214315
Query: 667 agggtccaggaggaagccc 685
|||| || ||||||||||
Sbjct: 116214316 cgggttcaagaggaagccc 116214334
Score = 83.8 bits (42), Expect = 2e-13
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 572 tcatattcagtaatggagagaggtggaagcaaatacggcgcttctccctcatgaccctga 631
|||| ||||| | |||| |||| |||||| | || ||||||||||||||||||||||||
Sbjct: 116122262 tcatcttcagcagtggaaagagatggaaggagatccggcgcttctccctcatgaccctgc 116122321
Query: 632 ggaactttgggatggggaagag 653
|||| |||||||||||||||||
Sbjct: 116122322 ggaattttgggatggggaagag 116122343
Score = 75.8 bits (38), Expect = 5e-11
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 452 agcctgccgtggtcttacatggatatgaagcagtgaaggaagctctgattgatc 505
||||| || |||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 116166109 agcctaccatggtgttgcatggatatgaagcagtgaaggaagctctgattgatc 116166162
Score = 75.8 bits (38), Expect = 5e-11
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 572 tcatattcagtaatggagagaggtggaagcaaatacggcgcttctccctcatgaccctga 631
|||| ||||| |||||| ||| |||||| |||| ||||||||||||||||||||| ||
Sbjct: 116301404 tcatcttcagcaatggaaagaaatggaaggaaatccggcgcttctccctcatgaccttgc 116301463
Query: 632 ggaactttgggatggggaagaggagc 657
|||| || ||||||||||| ||||||
Sbjct: 116301464 ggaatttagggatggggaaaaggagc 116301489
Score = 69.9 bits (35), Expect = 3e-09
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 471 tggatatgaagcagtgaaggaagctctgattgatc 505
|||||||||||||||||||||||||||||||||||
Sbjct: 116264758 tggatatgaagcagtgaaggaagctctgattgatc 116264792
Score = 67.9 bits (34), Expect = 1e-08
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 460 gtggtcttacatggatatgaagcagtgaaggaagctctgattgatc 505
||||| ||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 116301111 gtggtgttatatggatatgaagcagtgaaggaagctctggttgatc 116301156
Score = 61.9 bits (31), Expect = 8e-07
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 471 tggatatgaagcagtgaaggaagctctgattgatc 505
|||||||||||||||||| ||||||||||||||||
Sbjct: 115974955 tggatatgaagcagtgaaagaagctctgattgatc 115974989
Score = 61.9 bits (31), Expect = 8e-07
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 750 ctgtgctccctgcaatgtgatctgctccatc 780
|||||||||||||||||||||||||||||||
Sbjct: 116218018 ctgtgctccctgcaatgtgatctgctccatc 116218048
Score = 60.0 bits (30), Expect = 3e-06
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 611 gcttctccctcatgaccctgaggaactttgggatggggaagaggag 656
||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 115975280 gcttctccctcatgatgctgaggaatttggggatggggaagaggag 115975325
Score = 60.0 bits (30), Expect = 3e-06
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 750 ctgtgctccctgcaatgtgatctgctccat 779
||||||||||||||||||||||||||||||
Sbjct: 116304780 ctgtgctccctgcaatgtgatctgctccat 116304809
>gb|GL896193.2| Sus scrofa unplaced genomic scaffold ChrUScaf4077
Length = 16514
Score = 61.9 bits (31), Expect = 8e-07
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 750 ctgtgctccctgcaatgtgatctgctccatc 780
|||||||||||||||||||||||||||||||
Sbjct: 13875 ctgtgctccctgcaatgtgatctgctccatc 13905
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 40,382,276
Number of extensions: 393
Number of successful extensions: 393
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 388
Number of HSP's successfully gapped: 32
Length of query: 1255
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1234
Effective length of database: 2,808,413,156
Effective search space: 3465581834504
Effective search space used: 3465581834504
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)