Animal-Genome cDNA 20110601C-002552

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002552
         (1783 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001124223.1| LIM and senescent cell antigen-like-containi...   701   0.0  
Alignment   gi|NP_001076964.1| LIM and senescent cell antigen-like domains ...   617   e-176
Alignment   gi|XP_002694569.1| PREDICTED: paxillin-like [Bos taurus].            144   2e-34
Alignment   gi|XP_595626.4| PREDICTED: paxillin-like [Bos taurus].               144   2e-34
Alignment   gi|NP_001020253.1| leupaxin [Bos taurus].                            138   2e-32
Alignment   gi|NP_001030390.1| transforming growth factor beta-1-induced tr...   136   7e-32
Alignment   gi|NP_001106722.1| PDZ and LIM domain protein 7 isoform 2 [Bos ...   129   6e-30
Alignment   gi|NP_001039511.1| four and a half LIM domains protein 2 [Bos t...   121   2e-27
Alignment   gi|NP_001029395.1| four and a half LIM domains protein 3 [Bos t...   115   1e-25
Alignment   gi|NP_001106730.1| four and a half LIM domains 1 isoform 2 [Bos...   115   2e-25

>ref|NP_001124223.1| LIM and senescent cell antigen-like-containing domain protein 2 [Bos
            taurus].
          Length = 341

 Score =  701 bits (1809), Expect = 0.0
 Identities = 317/341 (92%), Positives = 321/341 (94%)
 Frame = +3

Query: 129  MTGSNMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEG 308
            MTGSNMSNALANAVCQRCQARFAP+ERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEG
Sbjct: 1    MTGSNMSNALANAVCQRCQARFAPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEG 60

Query: 309  RKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGR 488
            RKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGR
Sbjct: 61   RKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGR 120

Query: 489  HLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAREL 668
            HLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMF+NDAYHPDHF+CTHCGKELTAEAREL
Sbjct: 121  HLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFKNDAYHPDHFSCTHCGKELTAEAREL 180

Query: 669  KGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKK 848
            KGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKK
Sbjct: 181  KGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKK 240

Query: 849  GLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFD 1028
            GLAYCETHYNQLFGDVCY CSHVIEGDVVSALNKAWCV+CFSCSTCNSRLTLKNKFVEFD
Sbjct: 241  GLAYCETHYNQLFGDVCYTCSHVIEGDVVSALNKAWCVHCFSCSTCNSRLTLKNKFVEFD 300

Query: 1029 MKPVCKRCYXXXXXXXXXXXXXXXXXVARRAQPKSSGLHSA 1151
            MKPVCKRCY                  ARRAQPKSSGLH A
Sbjct: 301  MKPVCKRCYEKFPLELKKRLKKLSELAARRAQPKSSGLHPA 341


>ref|NP_001076964.1| LIM and senescent cell antigen-like domains 3-like [Bos taurus].
          Length = 337

 Score =  617 bits (1590), Expect = e-176
 Identities = 266/309 (86%), Positives = 293/309 (94%)
 Frame = +3

Query: 129  MTGSNMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEG 308
            MT SNM+NALANA C+RC+  FAP+E+IVNSNGELYHE CFVCAQCF+ FPEGLFYEFEG
Sbjct: 8    MTNSNMANALANASCERCRGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEG 67

Query: 309  RKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGR 488
            RKYCEHDFQMLFAPCC  CGEFIIGRVIKAMNN+WHP CFRC+LC   LAD+GFVKNAGR
Sbjct: 68   RKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGR 127

Query: 489  HLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAREL 668
            HLCRPCHNREKA+GLGKYICQ+CH +IDEQPL+F+ND YHPDHFNC +CGKELTA+AREL
Sbjct: 128  HLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADAREL 187

Query: 669  KGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKK 848
            KGELYCLPCHDKMGVPICGACRRPIEGRVVNA+GKQWHVEHFVCAKCEKPFLGHRHYE+K
Sbjct: 188  KGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERK 247

Query: 849  GLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFD 1028
            GLAYCETHYNQLFGDVC++C+ VIEGDVVSALNKAWCV+CF+CSTC+++LTLKNKFVEFD
Sbjct: 248  GLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVHCFACSTCSAKLTLKNKFVEFD 307

Query: 1029 MKPVCKRCY 1055
            MKPVCK+CY
Sbjct: 308  MKPVCKKCY 316


>ref|XP_002694569.1| PREDICTED: paxillin-like [Bos taurus].
          Length = 427

 Score =  144 bits (364), Expect = 2e-34
 Identities = 78/236 (33%), Positives = 114/236 (48%), Gaps = 2/236 (0%)
 Frame = +3

Query: 354  CGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLC-RPCHNREKAKG 530
            CG+C + I G+V+ AM   WHP  F C  C  E+    F +  G+  C +  HN    + 
Sbjct: 194  CGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPR- 252

Query: 531  LGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYCLPCHDKM 707
                 C  C+  I ++ +   +  +HP+HF C  CG     E   E  G+ YC   +  M
Sbjct: 253  -----CYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDM 307

Query: 708  GVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 887
              P CG C R I    ++AL   WH E FVC +C  PF+    +E +G  YCE HY++  
Sbjct: 308  FAPKCGGCARAILENYISALNTLWHPECFVCRECFTPFVHGSFFEHEGQPYCEAHYHERR 367

Query: 888  GDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
            G +C  C   I G  ++A+ K +    F C+ C  +L  K  F E + KP C+ C+
Sbjct: 368  GSLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLN-KGTFKEQNDKPYCQNCF 422



 Score =  131 bits (330), Expect = 2e-30
 Identities = 75/245 (30%), Positives = 113/245 (46%), Gaps = 1/245 (0%)
 Frame = +3

Query: 156 LANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQ 335
           +A  VC  C+   A   ++V + G+ +H   FVC  C        F+E +G+ YCE D+ 
Sbjct: 189 VAKGVCGACKKPIAG--QVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYH 246

Query: 336 MLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNR 515
            LF+P C  C   I+ +V+ A++  WHP  F C  C       GF +  G+  CR  +  
Sbjct: 247 NLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD 306

Query: 516 EKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELT-AEARELKGELYCLP 692
             A       C  C   I E  +   N  +HP+ F C  C          E +G+ YC  
Sbjct: 307 MFAPK-----CGGCARAILENYISALNTLWHPECFVCRECFTPFVHGSFFEHEGQPYCEA 361

Query: 693 CHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETH 872
            + +    +C  C++PI GR + A+ K++H EHFVCA C K        E+    YC+  
Sbjct: 362 HYHERRGSLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQNC 421

Query: 873 YNQLF 887
           + +LF
Sbjct: 422 FLKLF 426



 Score =  116 bits (290), Expect = 7e-26
 Identities = 61/176 (34%), Positives = 85/176 (48%), Gaps = 1/176 (0%)
 Frame = +3

Query: 531  LGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKEL-TAEARELKGELYCLPCHDKM 707
            + K +C  C   I  Q +      +HP+HF CTHC +E+ +    E  G+ YC   +  +
Sbjct: 189  VAKGVCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNL 248

Query: 708  GVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 887
              P C  C  PI  +VV AL + WH EHF CA+C   F     +EK G AYC   Y  +F
Sbjct: 249  FSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMF 308

Query: 888  GDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
               C  C+  I  + +SALN  W   CF C  C +   +   F E + +P C+  Y
Sbjct: 309  APKCGGCARAILENYISALNTLWHPECFVCRECFTPF-VHGSFFEHEGQPYCEAHY 363



 Score =  101 bits (251), Expect = 2e-21
 Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 5/145 (3%)
 Frame = +3

Query: 636  GKELTAEARELKGELYCLPCHDKMGVP-----ICGACRRPIEGRVVNALGKQWHVEHFVC 800
            G +L +    L+ +L      +K+GV      +CGAC++PI G+VV A+GK WH EHFVC
Sbjct: 167  GSQLDSMLGSLQSDL------NKLGVATVAKGVCGACKKPIAGQVVTAMGKTWHPEHFVC 220

Query: 801  AKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCS 980
              C++       +E+ G  YCE  Y+ LF   CY C+  I   VV+AL++ W    F C+
Sbjct: 221  THCQEEIGSRNFFERDGQPYCEKDYHNLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCA 280

Query: 981  TCNSRLTLKNKFVEFDMKPVCKRCY 1055
             C +    +  F E D K  C++ Y
Sbjct: 281  QCGAFFGPEG-FHEKDGKAYCRKDY 304


>ref|XP_595626.4| PREDICTED: paxillin-like [Bos taurus].
          Length = 424

 Score =  144 bits (364), Expect = 2e-34
 Identities = 78/236 (33%), Positives = 114/236 (48%), Gaps = 2/236 (0%)
 Frame = +3

Query: 354  CGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLC-RPCHNREKAKG 530
            CG+C + I G+V+ AM   WHP  F C  C  E+    F +  G+  C +  HN    + 
Sbjct: 191  CGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPR- 249

Query: 531  LGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYCLPCHDKM 707
                 C  C+  I ++ +   +  +HP+HF C  CG     E   E  G+ YC   +  M
Sbjct: 250  -----CYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDM 304

Query: 708  GVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 887
              P CG C R I    ++AL   WH E FVC +C  PF+    +E +G  YCE HY++  
Sbjct: 305  FAPKCGGCARAILENYISALNTLWHPECFVCRECFTPFVHGSFFEHEGQPYCEAHYHERR 364

Query: 888  GDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
            G +C  C   I G  ++A+ K +    F C+ C  +L  K  F E + KP C+ C+
Sbjct: 365  GSLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLN-KGTFKEQNDKPYCQNCF 419



 Score =  131 bits (330), Expect = 2e-30
 Identities = 75/245 (30%), Positives = 113/245 (46%), Gaps = 1/245 (0%)
 Frame = +3

Query: 156 LANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQ 335
           +A  VC  C+   A   ++V + G+ +H   FVC  C        F+E +G+ YCE D+ 
Sbjct: 186 VAKGVCGACKKPIAG--QVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYH 243

Query: 336 MLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNR 515
            LF+P C  C   I+ +V+ A++  WHP  F C  C       GF +  G+  CR  +  
Sbjct: 244 NLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD 303

Query: 516 EKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELT-AEARELKGELYCLP 692
             A       C  C   I E  +   N  +HP+ F C  C          E +G+ YC  
Sbjct: 304 MFAPK-----CGGCARAILENYISALNTLWHPECFVCRECFTPFVHGSFFEHEGQPYCEA 358

Query: 693 CHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETH 872
            + +    +C  C++PI GR + A+ K++H EHFVCA C K        E+    YC+  
Sbjct: 359 HYHERRGSLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQNC 418

Query: 873 YNQLF 887
           + +LF
Sbjct: 419 FLKLF 423



 Score =  116 bits (290), Expect = 7e-26
 Identities = 61/176 (34%), Positives = 85/176 (48%), Gaps = 1/176 (0%)
 Frame = +3

Query: 531  LGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKEL-TAEARELKGELYCLPCHDKM 707
            + K +C  C   I  Q +      +HP+HF CTHC +E+ +    E  G+ YC   +  +
Sbjct: 186  VAKGVCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNL 245

Query: 708  GVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 887
              P C  C  PI  +VV AL + WH EHF CA+C   F     +EK G AYC   Y  +F
Sbjct: 246  FSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMF 305

Query: 888  GDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
               C  C+  I  + +SALN  W   CF C  C +   +   F E + +P C+  Y
Sbjct: 306  APKCGGCARAILENYISALNTLWHPECFVCRECFTPF-VHGSFFEHEGQPYCEAHY 360



 Score =  101 bits (251), Expect = 2e-21
 Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 5/145 (3%)
 Frame = +3

Query: 636  GKELTAEARELKGELYCLPCHDKMGVP-----ICGACRRPIEGRVVNALGKQWHVEHFVC 800
            G +L +    L+ +L      +K+GV      +CGAC++PI G+VV A+GK WH EHFVC
Sbjct: 164  GSQLDSMLGSLQSDL------NKLGVATVAKGVCGACKKPIAGQVVTAMGKTWHPEHFVC 217

Query: 801  AKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCS 980
              C++       +E+ G  YCE  Y+ LF   CY C+  I   VV+AL++ W    F C+
Sbjct: 218  THCQEEIGSRNFFERDGQPYCEKDYHNLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCA 277

Query: 981  TCNSRLTLKNKFVEFDMKPVCKRCY 1055
             C +    +  F E D K  C++ Y
Sbjct: 278  QCGAFFGPEG-FHEKDGKAYCRKDY 301


>ref|NP_001020253.1| leupaxin [Bos taurus].
          Length = 386

 Score =  138 bits (347), Expect = 2e-32
 Identities = 77/235 (32%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
 Frame = +3

Query: 354  CGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGL 533
            C SC + I G+VI A+   WHP  F C  C  E+    F + +G   C   ++      L
Sbjct: 152  CASCQKPIAGKVIHALGQAWHPEHFVCAHCKAEIGSSPFFERSGLAYCAEDYHH-----L 206

Query: 534  GKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYCLPCHDKMG 710
                C  C   I ++ L   N  +HP+HF C HCG+    E   E   + YC      M 
Sbjct: 207  FSPRCAYCAAPILDKVLTAMNQTWHPEHFFCAHCGEVFGEEGFHEKDKKPYCRKDFLGMF 266

Query: 711  VPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFG 890
             P CG C RP+    ++A+G  WH E FVC +C   F     +E  G  +CE HY+Q  G
Sbjct: 267  APRCGGCNRPVLENYLSAMGTVWHPECFVCGECFSGFSTGSFFELDGRPFCELHYHQRRG 326

Query: 891  DVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
             +C+ C   I G  +SA+   +    F C+ C ++L+ K  F E + K  C  C+
Sbjct: 327  TLCHGCGQPITGRCISAMGYKFHPEHFVCTFCLTQLS-KGVFKEQNDKTYCHPCF 380



 Score =  129 bits (325), Expect = 6e-30
 Identities = 76/241 (31%), Positives = 110/241 (45%), Gaps = 2/241 (0%)
 Frame = +3

Query: 171 CQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAP 350
           C  CQ   A   +++++ G+ +H   FVCA C        F+E  G  YC  D+  LF+P
Sbjct: 152 CASCQKPIAG--KVIHALGQAWHPEHFVCAHCKAEIGSSPFFERSGLAYCAEDYHHLFSP 209

Query: 351 CCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKG 530
            C  C   I+ +V+ AMN  WHP  F C  C     + GF +   +  C     R+   G
Sbjct: 210 RCAYCAAPILDKVLTAMNQTWHPEHFFCAHCGEVFGEEGFHEKDKKPYC-----RKDFLG 264

Query: 531 LGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKEL-TAEARELKGELYC-LPCHDK 704
           +    C  C+  + E  L      +HP+ F C  C     T    EL G  +C L  H +
Sbjct: 265 MFAPRCGGCNRPVLENYLSAMGTVWHPECFVCGECFSGFSTGSFFELDGRPFCELHYHQR 324

Query: 705 MGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQL 884
            G  +C  C +PI GR ++A+G ++H EHFVC  C          E+    YC   +N+L
Sbjct: 325 RGT-LCHGCGQPITGRCISAMGYKFHPEHFVCTFCLTQLSKGVFKEQNDKTYCHPCFNKL 383

Query: 885 F 887
           F
Sbjct: 384 F 384


>ref|NP_001030390.1| transforming growth factor beta-1-induced transcript 1 protein [Bos
            taurus].
          Length = 439

 Score =  136 bits (342), Expect = 7e-32
 Identities = 75/235 (31%), Positives = 109/235 (46%), Gaps = 1/235 (0%)
 Frame = +3

Query: 354  CGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGL 533
            CGSC + I G+V+ A+   WHP  F C  C   L    F +  G   C  C+    +   
Sbjct: 206  CGSCNKPIAGQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPECYFERFSPR- 264

Query: 534  GKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYCLPCHDKMG 710
                C  C+  I  + +      +HP+HF C  CG+    E   E +G  YC     ++ 
Sbjct: 265  ----CGLCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQLF 320

Query: 711  VPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFG 890
             P C  C+ PI    ++AL   WH + FVC +C  PF G   +E +G   CE H++   G
Sbjct: 321  APRCQGCQGPILDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHARRG 380

Query: 891  DVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
             +C  C   + G  VSAL + +  + F+C+ C   LT K  F E   KP C+ C+
Sbjct: 381  SLCATCGLPVTGRCVSALGRRFHPDHFTCTFCLRPLT-KGSFQERAGKPYCQPCF 434



 Score =  119 bits (299), Expect = 7e-27
 Identities = 71/245 (28%), Positives = 107/245 (43%), Gaps = 1/245 (0%)
 Frame = +3

Query: 159 ANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQM 338
           A  +C  C    A   ++V + G  +H   FVC  C        F+E +G  +C   +  
Sbjct: 202 AKGLCGSCNKPIAG--QVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPECYFE 259

Query: 339 LFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNRE 518
            F+P CG C + I  +++ A+  +WHP  F C  C     D GF +  GR  C     R 
Sbjct: 260 RFSPRCGLCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYC-----RR 314

Query: 519 KAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYCLPC 695
               L    CQ C   I +  +   +  +HPD F C  C    +  +  E +G   C   
Sbjct: 315 DFLQLFAPRCQGCQGPILDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENH 374

Query: 696 HDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHY 875
                  +C  C  P+ GR V+ALG+++H +HF C  C +P       E+ G  YC+  +
Sbjct: 375 FHARRGSLCATCGLPVTGRCVSALGRRFHPDHFTCTFCLRPLTKGSFQERAGKPYCQPCF 434

Query: 876 NQLFG 890
            +LFG
Sbjct: 435 LKLFG 439



 Score =  115 bits (289), Expect = 1e-25
 Identities = 61/177 (34%), Positives = 88/177 (49%), Gaps = 1/177 (0%)
 Frame = +3

Query: 519  KAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAR-ELKGELYCLPC 695
            +AKGL    C  C+  I  Q +     A+HP+HF C  C   L   +  E  G  +C  C
Sbjct: 201  QAKGL----CGSCNKPIAGQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPEC 256

Query: 696  HDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHY 875
            + +   P CG C +PI  ++V ALG  WH EHF C  C +PF     +E++G  YC   +
Sbjct: 257  YFERFSPRCGLCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDF 316

Query: 876  NQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCK 1046
             QLF   C  C   I  + +SAL+  W  +CF C  C +  +    F E + +P+C+
Sbjct: 317  LQLFAPRCQGCQGPILDNYISALSALWHPDCFVCRECFAPFS-GGSFFEHEGRPLCE 372


>ref|NP_001106722.1| PDZ and LIM domain protein 7 isoform 2 [Bos taurus].
          Length = 424

 Score =  129 bits (325), Expect = 6e-30
 Identities = 66/171 (38%), Positives = 91/171 (53%), Gaps = 3/171 (1%)
 Frame = +3

Query: 543  ICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAR-ELKGELYCLPCHDKMGVPI 719
            +C +CH VI  + L+    AYHP+ F C+ CGK L      E KG ++C PC+D    P 
Sbjct: 248  VCHQCHKVIRGRYLVALGRAYHPEEFVCSQCGKVLEEGGFFEEKGAIFCPPCYDVRYAPS 307

Query: 720  CGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVC 899
            C  C++ I G V++AL   WHV  F CA C+ P      Y ++G  YCE  Y ++FG  C
Sbjct: 308  CAKCKKKITGEVMHALKTTWHVHCFTCAACKAPIRNRAFYMEEGAPYCEPDYEKMFGTKC 367

Query: 900  YNCSHVIE-GD-VVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCK 1046
              C   I+ GD  + AL  +W   CF C+ C   L  K  + + D KP+CK
Sbjct: 368  RGCDFKIDAGDRFLEALGFSWHDTCFVCAICQINLEGKTFYSKKD-KPLCK 417



 Score = 87.0 bits (214), Expect = 5e-17
 Identities = 54/178 (30%), Positives = 76/178 (42%), Gaps = 3/178 (1%)
 Frame = +3

Query: 348 PCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAK 527
           P C  C + I GR + A+   +HP  F C  C   L + GF +  G   C PC++   A 
Sbjct: 247 PVCHQCHKVIRGRYLVALGRAYHPEEFVCSQCGKVLEEGGFFEEKGAIFCPPCYDVRYAP 306

Query: 528 GLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAREL-KGELYCLPCHDK 704
                 C +C   I  + +      +H   F C  C   +   A  + +G  YC P ++K
Sbjct: 307 S-----CAKCKKKITGEVMHALKTTWHVHCFTCAACKAPIRNRAFYMEEGAPYCEPDYEK 361

Query: 705 MGVPICGACRRPIEG--RVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETH 872
           M    C  C   I+   R + ALG  WH   FVCA C+    G   Y KK    C++H
Sbjct: 362 MFGTKCRGCDFKIDAGDRFLEALGFSWHDTCFVCAICQINLEGKTFYSKKDKPLCKSH 419



 Score = 83.6 bits (205), Expect = 5e-16
 Identities = 38/114 (33%), Positives = 62/114 (54%)
 Frame = +3

Query: 714  PICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGD 893
            P+C  C + I GR + ALG+ +H E FVC++C K       +E+KG  +C   Y+  +  
Sbjct: 247  PVCHQCHKVIRGRYLVALGRAYHPEEFVCSQCGKVLEEGGFFEEKGAIFCPPCYDVRYAP 306

Query: 894  VCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
             C  C   I G+V+ AL   W V+CF+C+ C + +  +  ++E +  P C+  Y
Sbjct: 307  SCAKCKKKITGEVMHALKTTWHVHCFTCAACKAPIRNRAFYME-EGAPYCEPDY 359



 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 2/158 (1%)
 Frame = +3

Query: 168 VCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFA 347
           VC +C        R + + G  YH   FVC+QC +   EG F+E +G  +C   + + +A
Sbjct: 248 VCHQCHKVIRG--RYLVALGRAYHPEEFVCSQCGKVLEEGGFFEEKGAIFCPPCYDVRYA 305

Query: 348 PCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAK 527
           P C  C + I G V+ A+   WH  CF C  C   + +  F    G   C P  + EK  
Sbjct: 306 PSCAKCKKKITGEVMHALKTTWHVHCFTCAACKAPIRNRAFYMEEGAPYCEP--DYEKMF 363

Query: 528 GLGKYICQRCHLVID--EQPLMFRNDAYHPDHFNCTHC 635
           G     C+ C   ID  ++ L     ++H   F C  C
Sbjct: 364 GTK---CRGCDFKIDAGDRFLEALGFSWHDTCFVCAIC 398


>ref|NP_001039511.1| four and a half LIM domains protein 2 [Bos taurus].
          Length = 279

 Score =  121 bits (304), Expect = 2e-27
 Identities = 72/252 (28%), Positives = 114/252 (45%), Gaps = 10/252 (3%)
 Frame = +3

Query: 303  EGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMN---NNWHPGCFRCELCDVELADLGFV 473
            E + YC   F+ LFA  C  CG+ +IG   K ++    +WH  CF C  C   L D  F 
Sbjct: 23   EEQPYCVACFEALFASTCEECGK-LIGCDCKDLSYKDRHWHEACFHCSRCRGSLVDKPFA 81

Query: 474  KNAGRHLCRPCHNREKAKGLGKYICQRCHLVI--DEQPLMFRNDAYHPDHFNCTHCGKEL 647
                + LC  C+++E +       CQ C   I    + + ++  ++H   F C  C + +
Sbjct: 82   AKEDQLLCTDCYSQEYSSR-----CQECKKSIMPGTRKMEYKGSSWHETCFICHRCQQPI 136

Query: 648  TAEARELK-GELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFL 824
              ++   K  E +C+PC+++     C  C++PI    V    + WH E FVC  C+KP  
Sbjct: 137  GTKSFIPKDSENFCVPCYERQYALQCVQCKKPITTGGVTYREQPWHRECFVCTACKKPLS 196

Query: 825  GHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEG----DVVSALNKAWCVNCFSCSTCNS 992
            G R   +   AYC   +  L+   C  C++ I G      +S   + W  +CF+C  C+ 
Sbjct: 197  GQRFTSRDEFAYCLGCFCDLYAKKCAGCANPISGLGGTKYISFEERQWHNDCFNCKKCSL 256

Query: 993  RLTLKNKFVEFD 1028
             L  +    E D
Sbjct: 257  SLVGRGFLTERD 268



 Score = 98.6 bits (244), Expect = 2e-20
 Identities = 58/232 (25%), Positives = 97/232 (41%), Gaps = 7/232 (3%)
 Frame = +3

Query: 153 ALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDF 332
           AL  + C+ C        + ++     +HE CF C++C     +  F   E +  C   +
Sbjct: 34  ALFASTCEECGKLIGCDCKDLSYKDRHWHEACFHCSRCRGSLVDKPFAAKEDQLLCTDCY 93

Query: 333 QMLFAPCCGSCGEFII--GRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPC 506
              ++  C  C + I+   R ++   ++WH  CF C  C   +    F+     + C PC
Sbjct: 94  SQEYSSRCQECKKSIMPGTRKMEYKGSSWHETCFICHRCQQPIGTKSFIPKDSENFCVPC 153

Query: 507 HNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGEL-Y 683
           + R+ A       C +C   I    + +R   +H + F CT C K L+ +    + E  Y
Sbjct: 154 YERQYA-----LQCVQCKKPITTGGVTYREQPWHRECFVCTACKKPLSGQRFTSRDEFAY 208

Query: 684 CLPCHDKMGVPICGACRRPIEG----RVVNALGKQWHVEHFVCAKCEKPFLG 827
           CL C   +    C  C  PI G    + ++   +QWH + F C KC    +G
Sbjct: 209 CLGCFCDLYAKKCAGCANPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVG 260



 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 30/95 (31%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
 Frame = +3

Query: 234 YHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIG----RVIKAM 401
           +H  CFVC  C +P     F   +   YC   F  L+A  C  C   I G    + I   
Sbjct: 181 WHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCAGCANPISGLGGTKYISFE 240

Query: 402 NNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPC 506
              WH  CF C+ C + L   GF+      LC  C
Sbjct: 241 ERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDC 275


>ref|NP_001029395.1| four and a half LIM domains protein 3 [Bos taurus].
          Length = 280

 Score =  115 bits (289), Expect = 1e-25
 Identities = 64/233 (27%), Positives = 100/233 (42%), Gaps = 7/233 (3%)
 Frame = +3

Query: 150 NALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHD 329
           N  AN  C  CQ       R +      +HE CF C +C R   +  F   +    C   
Sbjct: 34  NTFANT-CAECQQLIGHDSRELFYEDRHFHEGCFRCCRCQRSLADEPFTCQDSELLCNDC 92

Query: 330 FQMLFAPCCGSCGEFII--GRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRP 503
           +   F+  C +CGE ++   R ++     WH  CF C  C+  L    FV + G H C P
Sbjct: 93  YCSAFSSQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVP 152

Query: 504 CHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGEL 680
           C+  + A       C RC   + +  + +R+  +H +   CT C   L  +     + + 
Sbjct: 153 CYENKFAPR-----CARCSKTLTQGGVTYRDQPWHRECLVCTGCQTPLAGQQFTSREDDP 207

Query: 681 YCLPCHDKMGVPICGACRRPIE----GRVVNALGKQWHVEHFVCAKCEKPFLG 827
           YC+ C  ++  P C +C+RPI     G+ V+   + WH   F CA+C    +G
Sbjct: 208 YCVTCFGELFAPKCSSCKRPITGLGGGKYVSFEDRHWHHSCFSCARCSTSLVG 260



 Score =  114 bits (286), Expect = 2e-25
 Identities = 74/277 (26%), Positives = 117/277 (42%), Gaps = 9/277 (3%)
 Frame = +3

Query: 249  FVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFI--IGRVIKAMNNNWHPG 422
            F CA+C        + + +   YC   +   FA  C  C + I    R +   + ++H G
Sbjct: 5    FDCAKCSESLYGRKYIQTDDGPYCVPCYDNTFANTCAECQQLIGHDSRELFYEDRHFHEG 64

Query: 423  CFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVI--DEQPLMFRN 596
            CFRC  C   LAD  F       LC  C+    +       C  C   +    + L +  
Sbjct: 65   CFRCCRCQRSLADEPFTCQDSELLCNDCYCSAFSSQ-----CSACGETVMPGSRKLEYGG 119

Query: 597  DAYHPDHFNCTHCGKELTAEAREL-KGELYCLPCHDKMGVPICGACRRPIEGRVVNALGK 773
              +H   F C+ C + L + +    KG  YC+PC++    P C  C + +    V    +
Sbjct: 120  QTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGGVTYRDQ 179

Query: 774  QWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIE----GDVVSA 941
             WH E  VC  C+ P  G +   ++   YC T + +LF   C +C   I     G  VS 
Sbjct: 180  PWHRECLVCTGCQTPLAGQQFTSREDDPYCVTCFGELFAPKCSSCKRPITGLGGGKYVSF 239

Query: 942  LNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRC 1052
             ++ W  +CFSC+ C++ L +   FV    + +C+ C
Sbjct: 240  EDRHWHHSCFSCARCSTSL-VGQGFVPDGDQVLCQGC 275



 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 45/180 (25%), Positives = 66/180 (36%), Gaps = 5/180 (2%)
 Frame = +3

Query: 171 CQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAP 350
           C  C     P  R +   G+ +HEHCF+C+ C +P     F   +G  YC   ++  FAP
Sbjct: 101 CSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYENKFAP 160

Query: 351 CCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKG 530
            C  C + +    +   +  WH  C  C  C   LA   F        C  C     A  
Sbjct: 161 RCARCSKTLTQGGVTYRDQPWHRECLVCTGCQTPLAGQQFTSREDDPYCVTCFGELFAPK 220

Query: 531 LGKYICQRCHLVI----DEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKG-ELYCLPC 695
                C  C   I      + + F +  +H   F+C  C   L  +     G ++ C  C
Sbjct: 221 -----CSSCKRPITGLGGGKYVSFEDRHWHHSCFSCARCSTSLVGQGFVPDGDQVLCQGC 275


>ref|NP_001106730.1| four and a half LIM domains 1 isoform 2 [Bos taurus].
          Length = 280

 Score =  115 bits (287), Expect = 2e-25
 Identities = 79/279 (28%), Positives = 109/279 (39%), Gaps = 11/279 (3%)
 Frame = +3

Query: 249  FVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFI--IGRVIKAMNNNWHPG 422
            F C  C        + + +G   C   F    A  C  C + I    + +   N  WH  
Sbjct: 5    FDCHYCRDNLQGKKYVQKDGHHCCLKCFDKFCANTCVQCRKPIGADSKEVHYKNRYWHDT 64

Query: 423  CFRCELCDVELADLGFVKNAGRHLCRPCHNRE---KAKGLGKYICQRCHLVIDEQPLMFR 593
            CFRC  C   LA   FV    + LC  C  RE   K KG  K I      V  +Q + ++
Sbjct: 65   CFRCSKCLQPLASETFVAKDNKILCNKCTTREDNPKCKGCLKPI------VAGDQNVEYK 118

Query: 594  NDAYHPDHFNCTHCGKELTAEARELKGE-LYCLPCHDKMGVPICGACRRPIEGRVVNALG 770
               +H D F C++C + +   +   KGE  YC+ CH+      C  C + I    +    
Sbjct: 119  GTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFAKHCVKCNKAITSGGITYQD 178

Query: 771  KQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEG-----DVV 935
            + WH E FVC  C K   G R    +   YC   Y       C  C + I G      VV
Sbjct: 179  QPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVV 238

Query: 936  SALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRC 1052
            +   ++W   CF C  C+  L  K +FV    +  C  C
Sbjct: 239  AYEGQSWHDYCFHCKKCSVNLANK-RFVFHQEQVYCPDC 276



 Score = 96.7 bits (239), Expect = 6e-20
 Identities = 56/239 (23%), Positives = 92/239 (38%), Gaps = 8/239 (3%)
 Frame = +3

Query: 171 CQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAP 350
           C +C+       + V+     +H+ CF C++C +P     F   + +  C         P
Sbjct: 40  CVQCRKPIGADSKEVHYKNRYWHDTCFRCSKCLQPLASETFVAKDNKILCNKCTTREDNP 99

Query: 351 CCGSCGEFIIG--RVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKA 524
            C  C + I+   + ++     WH  CF C  C   +    F        C  CH  + A
Sbjct: 100 KCKGCLKPIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHEAKFA 159

Query: 525 KGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYCLPCHD 701
           K      C +C+  I    + +++  +H + F C  C K+L  +    ++ + YC+ C+ 
Sbjct: 160 KH-----CVKCNKAITSGGITYQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYK 214

Query: 702 KMGVPICGACRRPIEG-----RVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYC 863
                 C  C+ PI G      VV   G+ WH   F C KC       R    +   YC
Sbjct: 215 NFVAKKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYC 273



 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 46/188 (24%), Positives = 70/188 (37%), Gaps = 6/188 (3%)
 Frame = +3

Query: 162 NAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQML 341
           N  C+ C       ++ V   G ++H+ CF C+ C +    G F+      YC    +  
Sbjct: 98  NPKCKGCLKPIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHEAK 157

Query: 342 FAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREK 521
           FA  C  C + I    I   +  WH  CF C  C  +LA   F     ++ C  C+    
Sbjct: 158 FAKHCVKCNKAITSGGITYQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFV 217

Query: 522 AKGLGKYICQRCHLVI-----DEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGE-LY 683
           AK      C  C   I         + +   ++H   F+C  C   L  +      E +Y
Sbjct: 218 AKK-----CAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVY 272

Query: 684 CLPCHDKM 707
           C  C  K+
Sbjct: 273 CPDCAKKL 280


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 75,455,973
Number of extensions: 2329007
Number of successful extensions: 10675
Number of sequences better than 1.0e-05: 54
Number of HSP's gapped: 10079
Number of HSP's successfully gapped: 154
Length of query: 594
Length of database: 17,681,374
Length adjustment: 108
Effective length of query: 486
Effective length of database: 14,107,870
Effective search space: 6856424820
Effective search space used: 6856424820
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002552
         (1783 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_852227.1| PREDICTED: similar to LIM and senescent cell an...   690   0.0  
Alignment   gi|XP_862938.1| PREDICTED: similar to LIM and senescent cell an...   616   e-176
Alignment   gi|XP_863061.1| PREDICTED: similar to LIM and senescent cell an...   613   e-175
Alignment   gi|XP_531769.2| PREDICTED: similar to LIM and senescent cell an...   610   e-174
Alignment   gi|XP_863034.1| PREDICTED: similar to LIM and senescent cell an...   453   e-127
Alignment   gi|XP_862983.1| PREDICTED: similar to LIM and senescent cell an...   296   6e-80
Alignment   gi|XP_862963.1| PREDICTED: similar to LIM and senescent cell an...   212   1e-54
Alignment   gi|XP_543425.2| PREDICTED: similar to Paxillin [Canis familiari...   144   2e-34
Alignment   gi|XP_540583.2| PREDICTED: similar to leupaxin [Canis familiari...   140   3e-33
Alignment   gi|XP_547052.2| PREDICTED: similar to androgen receptor coactiv...   136   6e-32

>ref|XP_852227.1| PREDICTED: similar to LIM and senescent cell antigen-like domains 2
            [Canis familiaris].
          Length = 368

 Score =  690 bits (1780), Expect = 0.0
 Identities = 310/337 (91%), Positives = 317/337 (94%)
 Frame = +3

Query: 141  NMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYC 320
            NMSNALANAVCQRCQARFAP+ERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYC
Sbjct: 32   NMSNALANAVCQRCQARFAPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYC 91

Query: 321  EHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCR 500
            EHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCR
Sbjct: 92   EHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCR 151

Query: 501  PCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGEL 680
            PCHNREKAKGLGKY+CQRCHLVIDEQPLMF+NDAYHPDHF+CTHCGKELTAEARELKGEL
Sbjct: 152  PCHNREKAKGLGKYVCQRCHLVIDEQPLMFKNDAYHPDHFSCTHCGKELTAEARELKGEL 211

Query: 681  YCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAY 860
            YCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAY
Sbjct: 212  YCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAY 271

Query: 861  CETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPV 1040
            CETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNS+LTLKNKFVEFDMKPV
Sbjct: 272  CETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSKLTLKNKFVEFDMKPV 331

Query: 1041 CKRCYXXXXXXXXXXXXXXXXXVARRAQPKSSGLHSA 1151
            CKRCY                  AR+A PKS GL+SA
Sbjct: 332  CKRCYEKFPLELKKRLKKLSELAARKAHPKSVGLNSA 368


>ref|XP_862938.1| PREDICTED: similar to LIM and senescent cell antigen-like domains 1
            isoform 2 [Canis familiaris].
          Length = 387

 Score =  616 bits (1588), Expect = e-176
 Identities = 265/305 (86%), Positives = 290/305 (95%)
 Frame = +3

Query: 141  NMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYC 320
            NM+NALANA C+RC+  FAP+E+IVNSNGELYHE CFVCAQCF+ FPEGLFYEFEGRKYC
Sbjct: 62   NMANALANATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYC 121

Query: 321  EHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCR 500
            EHDFQMLFAPCC  CGEFIIGRVIKAMNN+WHP CFRC+LC   LAD+GFVKNAGRHLCR
Sbjct: 122  EHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCR 181

Query: 501  PCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGEL 680
            PCHNREKA+GLGKYICQ+CH +IDEQPL+F+ND YHPDHFNC +CGKELTA+ARELKGEL
Sbjct: 182  PCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGEL 241

Query: 681  YCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAY 860
            YCLPCHDKMGVPICGACRRPIEGRVVNA+GKQWHVEHFVCAKCEKPFLGHRHYE+KGLAY
Sbjct: 242  YCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAY 301

Query: 861  CETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPV 1040
            CETHYNQLFGDVC++C+ VIEGDVVSALNKAWCVNCF+CSTCN++LTLKNKFVEFDMKPV
Sbjct: 302  CETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPV 361

Query: 1041 CKRCY 1055
            CK+CY
Sbjct: 362  CKKCY 366


>ref|XP_863061.1| PREDICTED: similar to LIM and senescent cell antigen-like domains 1
            isoform 6 [Canis familiaris].
          Length = 325

 Score =  613 bits (1582), Expect = e-175
 Identities = 264/304 (86%), Positives = 289/304 (95%)
 Frame = +3

Query: 144  MSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCE 323
            M+NALANA C+RC+  FAP+E+IVNSNGELYHE CFVCAQCF+ FPEGLFYEFEGRKYCE
Sbjct: 1    MANALANATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE 60

Query: 324  HDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRP 503
            HDFQMLFAPCC  CGEFIIGRVIKAMNN+WHP CFRC+LC   LAD+GFVKNAGRHLCRP
Sbjct: 61   HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP 120

Query: 504  CHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGELY 683
            CHNREKA+GLGKYICQ+CH +IDEQPL+F+ND YHPDHFNC +CGKELTA+ARELKGELY
Sbjct: 121  CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY 180

Query: 684  CLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYC 863
            CLPCHDKMGVPICGACRRPIEGRVVNA+GKQWHVEHFVCAKCEKPFLGHRHYE+KGLAYC
Sbjct: 181  CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC 240

Query: 864  ETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVC 1043
            ETHYNQLFGDVC++C+ VIEGDVVSALNKAWCVNCF+CSTCN++LTLKNKFVEFDMKPVC
Sbjct: 241  ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVC 300

Query: 1044 KRCY 1055
            K+CY
Sbjct: 301  KKCY 304


>ref|XP_531769.2| PREDICTED: similar to LIM and senescent cell antigen-like domains 1
            isoform 1 [Canis familiaris].
          Length = 435

 Score =  610 bits (1572), Expect = e-174
 Identities = 262/305 (85%), Positives = 288/305 (94%)
 Frame = +3

Query: 141  NMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYC 320
            NM+NALANA C+RC+  FAP+E+IVNSNGELYHE CFVCAQCF+ FPEGLFYEFEGRKYC
Sbjct: 62   NMANALANATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYC 121

Query: 321  EHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCR 500
            EHDFQMLFAPCC  CGEFIIGRVIKAMNN+WHP CFRC+LC   LAD+GFVKNAGRHLCR
Sbjct: 122  EHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCR 181

Query: 501  PCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGEL 680
            PCHNREKA+GLGKYICQ+CH +IDEQPL+F+ND YHPDHFNC +CGKELTA+ARELKGEL
Sbjct: 182  PCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGEL 241

Query: 681  YCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAY 860
            YCLPCHDKMGVPICGACRRPIEGRVVNA+GKQWHVEHFVCAKCEKPFLGHRHYE+KGLAY
Sbjct: 242  YCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAY 301

Query: 861  CETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPV 1040
            CETHYNQLFGDVC++C+ VIEGDVVSALNKAWCVNCF+CSTCN++LTLK+KFVE D+KPV
Sbjct: 302  CETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKDKFVEIDLKPV 361

Query: 1041 CKRCY 1055
            CK CY
Sbjct: 362  CKHCY 366


>ref|XP_863034.1| PREDICTED: similar to LIM and senescent cell antigen-like domains 1
            isoform 5 [Canis familiaris].
          Length = 240

 Score =  453 bits (1165), Expect = e-127
 Identities = 192/219 (87%), Positives = 211/219 (96%)
 Frame = +3

Query: 399  MNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQ 578
            MNN+WHP CFRC+LC   LAD+GFVKNAGRHLCRPCHNREKA+GLGKYICQ+CH +IDEQ
Sbjct: 1    MNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYICQKCHAIIDEQ 60

Query: 579  PLMFRNDAYHPDHFNCTHCGKELTAEARELKGELYCLPCHDKMGVPICGACRRPIEGRVV 758
            PL+F+ND YHPDHFNC +CGKELTA+ARELKGELYCLPCHDKMGVPICGACRRPIEGRVV
Sbjct: 61   PLIFKNDPYHPDHFNCANCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVV 120

Query: 759  NALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVS 938
            NA+GKQWHVEHFVCAKCEKPFLGHRHYE+KGLAYCETHYNQLFGDVC++C+ VIEGDVVS
Sbjct: 121  NAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVS 180

Query: 939  ALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
            ALNKAWCVNCF+CSTCN++LTLKNKFVEFDMKPVCK+CY
Sbjct: 181  ALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCY 219



 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
 Frame = +3

Query: 180 CQARFAPSE-RIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCC 356
           C A   P E R+VN+ G+ +H   FVCA+C +PF     YE +G  YCE  +  LF   C
Sbjct: 108 CGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVC 167

Query: 357 GSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELA-DLGFVKNAGRHLCRPCHNR 515
             C   I G V+ A+N  W   CF C  C+ +L     FV+   + +C+ C+ +
Sbjct: 168 FHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEK 221



 Score = 73.2 bits (178), Expect = 8e-13
 Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 2/188 (1%)
 Frame = +3

Query: 147 SNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEH 326
           +  L   +CQ+C A     E+ +    + YH   F CA C +        E +G  YC  
Sbjct: 42  ARGLGKYICQKCHAII--DEQPLIFKNDPYHPDHFNCANCGKELTADA-RELKGELYCLP 98

Query: 327 DFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPC 506
               +  P CG+C   I GRV+ AM   WH   F C  C+         +  G   C   
Sbjct: 99  CHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETH 158

Query: 507 HNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGEL-- 680
           +N+     L   +C  C+ VI+   +   N A+  + F C+ C  +LT + + ++ ++  
Sbjct: 159 YNQ-----LFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKP 213

Query: 681 YCLPCHDK 704
            C  C++K
Sbjct: 214 VCKKCYEK 221


>ref|XP_862983.1| PREDICTED: similar to LIM and senescent cell antigen-like domains 1
            isoform 4 [Canis familiaris].
          Length = 163

 Score =  296 bits (757), Expect = 6e-80
 Identities = 128/139 (92%), Positives = 138/139 (99%)
 Frame = +3

Query: 639  KELTAEARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKP 818
            KELTA+ARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNA+GKQWHVEHFVCAKCEKP
Sbjct: 4    KELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKP 63

Query: 819  FLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRL 998
            FLGHRHYE+KGLAYCETHYNQLFGDVC++C+ VIEGDVVSALNKAWCVNCF+CSTCN++L
Sbjct: 64   FLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKL 123

Query: 999  TLKNKFVEFDMKPVCKRCY 1055
            TLKNKFVEFDMKPVCK+CY
Sbjct: 124  TLKNKFVEFDMKPVCKKCY 142



 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
 Frame = +3

Query: 180 CQARFAPSE-RIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCC 356
           C A   P E R+VN+ G+ +H   FVCA+C +PF     YE +G  YCE  +  LF   C
Sbjct: 31  CGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVC 90

Query: 357 GSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELA-DLGFVKNAGRHLCRPCHNR 515
             C   I G V+ A+N  W   CF C  C+ +L     FV+   + +C+ C+ +
Sbjct: 91  FHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEK 144



 Score = 60.8 bits (146), Expect = 4e-09
 Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
 Frame = +3

Query: 297 EFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVK 476
           E +G  YC      +  P CG+C   I GRV+ AM   WH   F C  C+         +
Sbjct: 12  ELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYE 71

Query: 477 NAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAE 656
             G   C   +N+     L   +C  C+ VI+   +   N A+  + F C+ C  +LT +
Sbjct: 72  RKGLAYCETHYNQ-----LFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLK 126

Query: 657 ARELKGEL--YCLPCHDK 704
            + ++ ++   C  C++K
Sbjct: 127 NKFVEFDMKPVCKKCYEK 144


>ref|XP_862963.1| PREDICTED: similar to LIM and senescent cell antigen-like domains 1
            isoform 3 [Canis familiaris].
          Length = 256

 Score =  212 bits (539), Expect = 1e-54
 Identities = 102/181 (56%), Positives = 120/181 (66%), Gaps = 3/181 (1%)
 Frame = +3

Query: 522  AKGLGKYICQRCH--LVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYCLP 692
            A  L    C+RC       E+ +    + YH   F C  C ++       E +G  YC  
Sbjct: 64   ANALANATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEH 123

Query: 693  CHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETH 872
                +  P C  C   I GRV+         +HFVCAKCEKPFLGHRHYE+KGLAYCETH
Sbjct: 124  DFQMLFAPCCHQCGEFIIGRVI---------KHFVCAKCEKPFLGHRHYERKGLAYCETH 174

Query: 873  YNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRC 1052
            YNQLFGDVC++C+ VIEGDVVSALNKAWCVNCF+CSTCN++LTLKNKFVEFDMKPVCK+C
Sbjct: 175  YNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKC 234

Query: 1053 Y 1055
            Y
Sbjct: 235  Y 235



 Score =  182 bits (463), Expect = 7e-46
 Identities = 93/190 (48%), Positives = 119/190 (62%), Gaps = 2/190 (1%)
 Frame = +3

Query: 141 NMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYC 320
           NM+NALANA C+RC+  FAP+E+IVNSNGELYHE CFVCAQCF+ FPEGLFYEFEGRKYC
Sbjct: 62  NMANALANATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYC 121

Query: 321 EHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCR 500
           EHDFQMLFAPCC  CGEFIIGRVIK          F C  C+         +  G   C 
Sbjct: 122 EHDFQMLFAPCCHQCGEFIIGRVIKH---------FVCAKCEKPFLGHRHYERKGLAYCE 172

Query: 501 PCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGEL 680
             +N+     L   +C  C+ VI+   +   N A+  + F C+ C  +LT + + ++ ++
Sbjct: 173 THYNQ-----LFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDM 227

Query: 681 --YCLPCHDK 704
              C  C++K
Sbjct: 228 KPVCKKCYEK 237


>ref|XP_543425.2| PREDICTED: similar to Paxillin [Canis familiaris].
          Length = 664

 Score =  144 bits (364), Expect = 2e-34
 Identities = 78/236 (33%), Positives = 113/236 (47%), Gaps = 2/236 (0%)
 Frame = +3

Query: 354  CGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLC-RPCHNREKAKG 530
            CG+C + I G+V+ AM   WHP  F C  C  E+    F +  G+  C +  HN    + 
Sbjct: 431  CGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPR- 489

Query: 531  LGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYCLPCHDKM 707
                 C  C+  I ++ +   +  +HP+HF C  CG     E   E  G+ YC   +  M
Sbjct: 490  -----CYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDM 544

Query: 708  GVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 887
              P CG C R I    ++AL   WH E FVC +C  PF+    +E  G  YCE HY++  
Sbjct: 545  FAPKCGGCARAILENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERR 604

Query: 888  GDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
            G +C  C   I G  ++A+ K +    F C+ C  +L  K  F E + KP C+ C+
Sbjct: 605  GSLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLN-KGTFKEQNDKPYCQNCF 659



 Score =  131 bits (330), Expect = 2e-30
 Identities = 77/246 (31%), Positives = 116/246 (47%), Gaps = 2/246 (0%)
 Frame = +3

Query: 156  LANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQ 335
            +A  VC  C+   A   ++V + G+ +H   FVC  C        F+E +G+ YCE D+ 
Sbjct: 426  VAKGVCGACKKPIAG--QVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYH 483

Query: 336  MLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNR 515
             LF+P C  C   I+ +V+ A++  WHP  F C  C       GF +  G+  CR  +  
Sbjct: 484  NLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD 543

Query: 516  EKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKE-LTAEARELKGELYC-L 689
              A       C  C   I E  +   N  +HP+ F C  C    +     E  G+ YC +
Sbjct: 544  MFAPK-----CGGCARAILENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEV 598

Query: 690  PCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCET 869
              H++ G  +C  C++PI GR + A+ K++H EHFVCA C K        E+    YC+ 
Sbjct: 599  HYHERRG-SLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQN 657

Query: 870  HYNQLF 887
             + +LF
Sbjct: 658  CFLKLF 663



 Score =  117 bits (293), Expect = 4e-26
 Identities = 62/176 (35%), Positives = 85/176 (48%), Gaps = 1/176 (0%)
 Frame = +3

Query: 531  LGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKEL-TAEARELKGELYCLPCHDKM 707
            + K +C  C   I  Q +      +HP+HF CTHC +E+ +    E  G+ YC   +  +
Sbjct: 426  VAKGVCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNL 485

Query: 708  GVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 887
              P C  C  PI  +VV AL + WH EHF CA+C   F     +EK G AYC   Y  +F
Sbjct: 486  FSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMF 545

Query: 888  GDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
               C  C+  I  + +SALN  W   CF C  C +   +   F E D +P C+  Y
Sbjct: 546  APKCGGCARAILENYISALNTLWHPECFVCRECFTPF-VNGSFFEHDGQPYCEVHY 600



 Score =  101 bits (251), Expect = 3e-21
 Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 5/145 (3%)
 Frame = +3

Query: 636  GKELTAEARELKGELYCLPCHDKMGVP-----ICGACRRPIEGRVVNALGKQWHVEHFVC 800
            G +L +    L+ +L      +K+GV      +CGAC++PI G+VV A+GK WH EHFVC
Sbjct: 404  GSQLDSMLGSLQSDL------NKLGVATVAKGVCGACKKPIAGQVVTAMGKTWHPEHFVC 457

Query: 801  AKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCS 980
              C++       +E+ G  YCE  Y+ LF   CY C+  I   VV+AL++ W    F C+
Sbjct: 458  THCQEEIGSRNFFERDGQPYCEKDYHNLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCA 517

Query: 981  TCNSRLTLKNKFVEFDMKPVCKRCY 1055
             C +    +  F E D K  C++ Y
Sbjct: 518  QCGAFFGPEG-FHEKDGKAYCRKDY 541


>ref|XP_540583.2| PREDICTED: similar to leupaxin [Canis familiaris].
          Length = 386

 Score =  140 bits (354), Expect = 3e-33
 Identities = 79/235 (33%), Positives = 111/235 (47%), Gaps = 1/235 (0%)
 Frame = +3

Query: 354  CGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGL 533
            C SC + I G+VI A+   WHP  F C  C  E+    F + +G   C   ++      L
Sbjct: 152  CASCQKPIAGKVIHALGQAWHPEHFVCTHCKEEIGSSPFFERSGLAYCSKDYHH-----L 206

Query: 534  GKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYCLPCHDKMG 710
                C  C   I ++ L   N  +HP+HF C+HCG+   AE   E   + YC      M 
Sbjct: 207  FSPRCAYCAAPILDRVLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFLAMF 266

Query: 711  VPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFG 890
             P CG C RP+    ++A+   WH E FVC  C   F     +E  G  YCE HY+Q  G
Sbjct: 267  SPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSSGSFFELDGRPYCELHYHQRRG 326

Query: 891  DVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
             +C+ C   I G  +SA+   +    F C+ C ++L+ K  F E D K  C+ C+
Sbjct: 327  TLCHGCGQPITGRCISAMGHKFHPEHFVCAFCLTQLS-KGIFREQDDKTYCQPCF 380



 Score =  128 bits (322), Expect = 2e-29
 Identities = 76/247 (30%), Positives = 113/247 (45%), Gaps = 2/247 (0%)
 Frame = +3

Query: 153 ALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDF 332
           A+    C  CQ   A   +++++ G+ +H   FVC  C        F+E  G  YC  D+
Sbjct: 146 AVPKGHCASCQKPIAG--KVIHALGQAWHPEHFVCTHCKEEIGSSPFFERSGLAYCSKDY 203

Query: 333 QMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHN 512
             LF+P C  C   I+ RV+ AMN  WHP  F C  C       GF +   +  C     
Sbjct: 204 HHLFSPRCAYCAAPILDRVLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYC----- 258

Query: 513 REKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYC- 686
           R+    +    C  C+  + E  L   +  +HP+ F C  C    ++ +  EL G  YC 
Sbjct: 259 RKDFLAMFSPKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFSSFSSGSFFELDGRPYCE 318

Query: 687 LPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCE 866
           L  H + G  +C  C +PI GR ++A+G ++H EHFVCA C          E+    YC+
Sbjct: 319 LHYHQRRGT-LCHGCGQPITGRCISAMGHKFHPEHFVCAFCLTQLSKGIFREQDDKTYCQ 377

Query: 867 THYNQLF 887
             + +LF
Sbjct: 378 PCFTKLF 384


>ref|XP_547052.2| PREDICTED: similar to androgen receptor coactivator ARA55 [Canis
            familiaris].
          Length = 461

 Score =  136 bits (343), Expect = 6e-32
 Identities = 75/235 (31%), Positives = 110/235 (46%), Gaps = 1/235 (0%)
 Frame = +3

Query: 354  CGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGL 533
            CGSC + I G+V+ A+   WHP  F C  C + L    F +  G   C  C+    +   
Sbjct: 228  CGSCSKPIAGQVVTALGRAWHPEHFICGGCSMALGGSSFFEKDGAPFCPECYFERFSPR- 286

Query: 534  GKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYCLPCHDKMG 710
                C  C+  I  + +      +HP+HF C  CG+    E   E +G  YC     ++ 
Sbjct: 287  ----CGLCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQLF 342

Query: 711  VPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFG 890
             P C  C+ PI    ++AL   WH + FVC +C  PF G   +E +G   CE H++   G
Sbjct: 343  APRCQGCQGPILDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHARRG 402

Query: 891  DVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
             +C  C   + G  VSAL + +  + F+C+ C   LT K  F E   KP C+ C+
Sbjct: 403  SLCATCGLPVTGRCVSALGRRFHPDHFTCTFCLRPLT-KGSFQERAGKPYCQPCF 456



 Score =  117 bits (294), Expect = 3e-26
 Identities = 69/242 (28%), Positives = 106/242 (43%), Gaps = 1/242 (0%)
 Frame = +3

Query: 168 VCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFA 347
           +C  C    A   ++V + G  +H   F+C  C        F+E +G  +C   +   F+
Sbjct: 227 LCGSCSKPIAG--QVVTALGRAWHPEHFICGGCSMALGGSSFFEKDGAPFCPECYFERFS 284

Query: 348 PCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAK 527
           P CG C + I  +++ A+  +WHP  F C  C     D GF +  GR  C     R    
Sbjct: 285 PRCGLCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYC-----RRDFL 339

Query: 528 GLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYCLPCHDK 704
            L    CQ C   I +  +   +  +HPD F C  C    +  +  E +G   C      
Sbjct: 340 QLFAPRCQGCQGPILDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHA 399

Query: 705 MGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQL 884
               +C  C  P+ GR V+ALG+++H +HF C  C +P       E+ G  YC+  + +L
Sbjct: 400 RRGSLCATCGLPVTGRCVSALGRRFHPDHFTCTFCLRPLTKGSFQERAGKPYCQPCFVKL 459

Query: 885 FG 890
           FG
Sbjct: 460 FG 461



 Score =  114 bits (286), Expect = 2e-25
 Identities = 58/171 (33%), Positives = 84/171 (49%), Gaps = 1/171 (0%)
 Frame = +3

Query: 537  KYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAR-ELKGELYCLPCHDKMGV 713
            K +C  C   I  Q +     A+HP+HF C  C   L   +  E  G  +C  C+ +   
Sbjct: 225  KGLCGSCSKPIAGQVVTALGRAWHPEHFICGGCSMALGGSSFFEKDGAPFCPECYFERFS 284

Query: 714  PICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGD 893
            P CG C +PI  ++V ALG  WH EHF C  C +PF     +E++G  YC   + QLF  
Sbjct: 285  PRCGLCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQLFAP 344

Query: 894  VCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCK 1046
             C  C   I  + +SAL+  W  +CF C  C +  +    F E + +P+C+
Sbjct: 345  RCQGCQGPILDNYISALSALWHPDCFVCRECFAPFS-GGSFFEHEGRPLCE 394


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 77,950,173
Number of extensions: 2340508
Number of successful extensions: 10965
Number of sequences better than 1.0e-05: 89
Number of HSP's gapped: 10285
Number of HSP's successfully gapped: 237
Length of query: 594
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 486
Effective length of database: 15,274,216
Effective search space: 7423268976
Effective search space used: 7423268976
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002552
         (1783 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001154875.1| LIM and senescent cell antigen-like-containi...   692   0.0  
Alignment   gi|NP_001129509.2| LIM and senescent cell antigen-like-containi...   686   0.0  
Alignment   gi|NP_060450.2| LIM and senescent cell antigen-like-containing ...   684   0.0  
Alignment   gi|NP_001154876.1| LIM and senescent cell antigen-like-containi...   682   0.0  
Alignment   gi|NP_001180412.1| LIM and senescent cell antigen-like-containi...   619   e-177
Alignment   gi|NP_001180413.1| LIM and senescent cell antigen-like-containi...   615   e-176
Alignment   gi|NP_001180411.1| LIM and senescent cell antigen-like-containi...   614   e-176
Alignment   gi|NP_001180414.1| LIM and senescent cell antigen-like-containi...   614   e-176
Alignment   gi|NP_001180417.1| LIM and senescent cell antigen-like-containi...   612   e-175
Alignment   gi|NP_004978.2| LIM and senescent cell antigen-like-containing ...   612   e-175

>ref|NP_001154875.1| LIM and senescent cell antigen-like-containing domain protein 2
            isoform 3 [Homo sapiens].
          Length = 341

 Score =  692 bits (1786), Expect = 0.0
 Identities = 311/341 (91%), Positives = 322/341 (94%)
 Frame = +3

Query: 129  MTGSNMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEG 308
            MTGSNMS+ALANAVCQRCQARF+P+ERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEG
Sbjct: 1    MTGSNMSDALANAVCQRCQARFSPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEG 60

Query: 309  RKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGR 488
            RKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGR
Sbjct: 61   RKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGR 120

Query: 489  HLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAREL 668
            HLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFR+DAYHPDHFNCTHCGKELTAEAREL
Sbjct: 121  HLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRSDAYHPDHFNCTHCGKELTAEAREL 180

Query: 669  KGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKK 848
            KGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKK
Sbjct: 181  KGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKK 240

Query: 849  GLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFD 1028
            GLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCV+CFSCSTCNS+LTLKNKFVEFD
Sbjct: 241  GLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVSCFSCSTCNSKLTLKNKFVEFD 300

Query: 1029 MKPVCKRCYXXXXXXXXXXXXXXXXXVARRAQPKSSGLHSA 1151
            MKPVCKRCY                  +R+AQPK++ L+SA
Sbjct: 301  MKPVCKRCYEKFPLELKKRLKKLSELTSRKAQPKATDLNSA 341


>ref|NP_001129509.2| LIM and senescent cell antigen-like-containing domain protein 2
            isoform 1 [Homo sapiens].
          Length = 363

 Score =  686 bits (1770), Expect = 0.0
 Identities = 308/338 (91%), Positives = 319/338 (94%)
 Frame = +3

Query: 138  SNMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKY 317
            SNMS+ALANAVCQRCQARF+P+ERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKY
Sbjct: 26   SNMSDALANAVCQRCQARFSPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKY 85

Query: 318  CEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLC 497
            CEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLC
Sbjct: 86   CEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLC 145

Query: 498  RPCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGE 677
            RPCHNREKAKGLGKYICQRCHLVIDEQPLMFR+DAYHPDHFNCTHCGKELTAEARELKGE
Sbjct: 146  RPCHNREKAKGLGKYICQRCHLVIDEQPLMFRSDAYHPDHFNCTHCGKELTAEARELKGE 205

Query: 678  LYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLA 857
            LYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLA
Sbjct: 206  LYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLA 265

Query: 858  YCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKP 1037
            YCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCV+CFSCSTCNS+LTLKNKFVEFDMKP
Sbjct: 266  YCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVSCFSCSTCNSKLTLKNKFVEFDMKP 325

Query: 1038 VCKRCYXXXXXXXXXXXXXXXXXVARRAQPKSSGLHSA 1151
            VCKRCY                  +R+AQPK++ L+SA
Sbjct: 326  VCKRCYEKFPLELKKRLKKLSELTSRKAQPKATDLNSA 363


>ref|NP_060450.2| LIM and senescent cell antigen-like-containing domain protein 2
            isoform 2 [Homo sapiens].
          Length = 365

 Score =  684 bits (1766), Expect = 0.0
 Identities = 307/337 (91%), Positives = 318/337 (94%)
 Frame = +3

Query: 141  NMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYC 320
            NMS+ALANAVCQRCQARF+P+ERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYC
Sbjct: 29   NMSDALANAVCQRCQARFSPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYC 88

Query: 321  EHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCR 500
            EHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCR
Sbjct: 89   EHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCR 148

Query: 501  PCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGEL 680
            PCHNREKAKGLGKYICQRCHLVIDEQPLMFR+DAYHPDHFNCTHCGKELTAEARELKGEL
Sbjct: 149  PCHNREKAKGLGKYICQRCHLVIDEQPLMFRSDAYHPDHFNCTHCGKELTAEARELKGEL 208

Query: 681  YCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAY 860
            YCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAY
Sbjct: 209  YCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAY 268

Query: 861  CETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPV 1040
            CETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCV+CFSCSTCNS+LTLKNKFVEFDMKPV
Sbjct: 269  CETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVSCFSCSTCNSKLTLKNKFVEFDMKPV 328

Query: 1041 CKRCYXXXXXXXXXXXXXXXXXVARRAQPKSSGLHSA 1151
            CKRCY                  +R+AQPK++ L+SA
Sbjct: 329  CKRCYEKFPLELKKRLKKLSELTSRKAQPKATDLNSA 365


>ref|NP_001154876.1| LIM and senescent cell antigen-like-containing domain protein 2
            isoform 5 [Homo sapiens].
          Length = 336

 Score =  682 bits (1760), Expect = 0.0
 Identities = 306/336 (91%), Positives = 317/336 (94%)
 Frame = +3

Query: 144  MSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCE 323
            MS+ALANAVCQRCQARF+P+ERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCE
Sbjct: 1    MSDALANAVCQRCQARFSPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCE 60

Query: 324  HDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRP 503
            HDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRP
Sbjct: 61   HDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRP 120

Query: 504  CHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGELY 683
            CHNREKAKGLGKYICQRCHLVIDEQPLMFR+DAYHPDHFNCTHCGKELTAEARELKGELY
Sbjct: 121  CHNREKAKGLGKYICQRCHLVIDEQPLMFRSDAYHPDHFNCTHCGKELTAEARELKGELY 180

Query: 684  CLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYC 863
            CLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYC
Sbjct: 181  CLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYC 240

Query: 864  ETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVC 1043
            ETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCV+CFSCSTCNS+LTLKNKFVEFDMKPVC
Sbjct: 241  ETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVSCFSCSTCNSKLTLKNKFVEFDMKPVC 300

Query: 1044 KRCYXXXXXXXXXXXXXXXXXVARRAQPKSSGLHSA 1151
            KRCY                  +R+AQPK++ L+SA
Sbjct: 301  KRCYEKFPLELKKRLKKLSELTSRKAQPKATDLNSA 336


>ref|NP_001180412.1| LIM and senescent cell antigen-like-containing domain protein 1
            isoform d [Homo sapiens].
          Length = 337

 Score =  619 bits (1595), Expect = e-177
 Identities = 267/309 (86%), Positives = 293/309 (94%)
 Frame = +3

Query: 129  MTGSNMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEG 308
            MT SNM+NALA+A C+RC+  FAP+E+IVNSNGELYHE CFVCAQCF+ FPEGLFYEFEG
Sbjct: 8    MTHSNMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEG 67

Query: 309  RKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGR 488
            RKYCEHDFQMLFAPCC  CGEFIIGRVIKAMNN+WHP CFRC+LC   LAD+GFVKNAGR
Sbjct: 68   RKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGR 127

Query: 489  HLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAREL 668
            HLCRPCHNREKA+GLGKYICQ+CH +IDEQPL+F+ND YHPDHFNC +CGKELTA+AREL
Sbjct: 128  HLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADAREL 187

Query: 669  KGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKK 848
            KGELYCLPCHDKMGVPICGACRRPIEGRVVNA+GKQWHVEHFVCAKCEKPFLGHRHYE+K
Sbjct: 188  KGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERK 247

Query: 849  GLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFD 1028
            GLAYCETHYNQLFGDVC++C+ VIEGDVVSALNKAWCVNCF+CSTCN++LTLKNKFVEFD
Sbjct: 248  GLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFD 307

Query: 1029 MKPVCKRCY 1055
            MKPVCK+CY
Sbjct: 308  MKPVCKKCY 316


>ref|NP_001180413.1| LIM and senescent cell antigen-like-containing domain protein 1
            isoform e [Homo sapiens].
          Length = 362

 Score =  615 bits (1587), Expect = e-176
 Identities = 265/306 (86%), Positives = 291/306 (95%)
 Frame = +3

Query: 138  SNMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKY 317
            SNM+NALA+A C+RC+  FAP+E+IVNSNGELYHE CFVCAQCF+ FPEGLFYEFEGRKY
Sbjct: 36   SNMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKY 95

Query: 318  CEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLC 497
            CEHDFQMLFAPCC  CGEFIIGRVIKAMNN+WHP CFRC+LC   LAD+GFVKNAGRHLC
Sbjct: 96   CEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLC 155

Query: 498  RPCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGE 677
            RPCHNREKA+GLGKYICQ+CH +IDEQPL+F+ND YHPDHFNC +CGKELTA+ARELKGE
Sbjct: 156  RPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGE 215

Query: 678  LYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLA 857
            LYCLPCHDKMGVPICGACRRPIEGRVVNA+GKQWHVEHFVCAKCEKPFLGHRHYE+KGLA
Sbjct: 216  LYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLA 275

Query: 858  YCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKP 1037
            YCETHYNQLFGDVC++C+ VIEGDVVSALNKAWCVNCF+CSTCN++LTLKNKFVEFDMKP
Sbjct: 276  YCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKP 335

Query: 1038 VCKRCY 1055
            VCK+CY
Sbjct: 336  VCKKCY 341


>ref|NP_001180411.1| LIM and senescent cell antigen-like-containing domain protein 1
            isoform c [Homo sapiens].
          Length = 329

 Score =  614 bits (1583), Expect = e-176
 Identities = 264/305 (86%), Positives = 290/305 (95%)
 Frame = +3

Query: 141  NMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYC 320
            NM+NALA+A C+RC+  FAP+E+IVNSNGELYHE CFVCAQCF+ FPEGLFYEFEGRKYC
Sbjct: 4    NMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYC 63

Query: 321  EHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCR 500
            EHDFQMLFAPCC  CGEFIIGRVIKAMNN+WHP CFRC+LC   LAD+GFVKNAGRHLCR
Sbjct: 64   EHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCR 123

Query: 501  PCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGEL 680
            PCHNREKA+GLGKYICQ+CH +IDEQPL+F+ND YHPDHFNC +CGKELTA+ARELKGEL
Sbjct: 124  PCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGEL 183

Query: 681  YCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAY 860
            YCLPCHDKMGVPICGACRRPIEGRVVNA+GKQWHVEHFVCAKCEKPFLGHRHYE+KGLAY
Sbjct: 184  YCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAY 243

Query: 861  CETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPV 1040
            CETHYNQLFGDVC++C+ VIEGDVVSALNKAWCVNCF+CSTCN++LTLKNKFVEFDMKPV
Sbjct: 244  CETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPV 303

Query: 1041 CKRCY 1055
            CK+CY
Sbjct: 304  CKKCY 308


>ref|NP_001180414.1| LIM and senescent cell antigen-like-containing domain protein 1
            isoform a [Homo sapiens].
          Length = 387

 Score =  614 bits (1583), Expect = e-176
 Identities = 264/305 (86%), Positives = 290/305 (95%)
 Frame = +3

Query: 141  NMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYC 320
            NM+NALA+A C+RC+  FAP+E+IVNSNGELYHE CFVCAQCF+ FPEGLFYEFEGRKYC
Sbjct: 62   NMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYC 121

Query: 321  EHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCR 500
            EHDFQMLFAPCC  CGEFIIGRVIKAMNN+WHP CFRC+LC   LAD+GFVKNAGRHLCR
Sbjct: 122  EHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCR 181

Query: 501  PCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGEL 680
            PCHNREKA+GLGKYICQ+CH +IDEQPL+F+ND YHPDHFNC +CGKELTA+ARELKGEL
Sbjct: 182  PCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGEL 241

Query: 681  YCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAY 860
            YCLPCHDKMGVPICGACRRPIEGRVVNA+GKQWHVEHFVCAKCEKPFLGHRHYE+KGLAY
Sbjct: 242  YCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAY 301

Query: 861  CETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPV 1040
            CETHYNQLFGDVC++C+ VIEGDVVSALNKAWCVNCF+CSTCN++LTLKNKFVEFDMKPV
Sbjct: 302  CETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPV 361

Query: 1041 CKRCY 1055
            CK+CY
Sbjct: 362  CKKCY 366


>ref|NP_001180417.1| LIM and senescent cell antigen-like-containing domain protein 1
            isoform b [Homo sapiens].
          Length = 325

 Score =  612 bits (1577), Expect = e-175
 Identities = 263/304 (86%), Positives = 289/304 (95%)
 Frame = +3

Query: 144  MSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCE 323
            M+NALA+A C+RC+  FAP+E+IVNSNGELYHE CFVCAQCF+ FPEGLFYEFEGRKYCE
Sbjct: 1    MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE 60

Query: 324  HDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRP 503
            HDFQMLFAPCC  CGEFIIGRVIKAMNN+WHP CFRC+LC   LAD+GFVKNAGRHLCRP
Sbjct: 61   HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP 120

Query: 504  CHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGELY 683
            CHNREKA+GLGKYICQ+CH +IDEQPL+F+ND YHPDHFNC +CGKELTA+ARELKGELY
Sbjct: 121  CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY 180

Query: 684  CLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYC 863
            CLPCHDKMGVPICGACRRPIEGRVVNA+GKQWHVEHFVCAKCEKPFLGHRHYE+KGLAYC
Sbjct: 181  CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC 240

Query: 864  ETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVC 1043
            ETHYNQLFGDVC++C+ VIEGDVVSALNKAWCVNCF+CSTCN++LTLKNKFVEFDMKPVC
Sbjct: 241  ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVC 300

Query: 1044 KRCY 1055
            K+CY
Sbjct: 301  KKCY 304


>ref|NP_004978.2| LIM and senescent cell antigen-like-containing domain protein 1
            isoform b [Homo sapiens].
          Length = 325

 Score =  612 bits (1577), Expect = e-175
 Identities = 263/304 (86%), Positives = 289/304 (95%)
 Frame = +3

Query: 144  MSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCE 323
            M+NALA+A C+RC+  FAP+E+IVNSNGELYHE CFVCAQCF+ FPEGLFYEFEGRKYCE
Sbjct: 1    MANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE 60

Query: 324  HDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRP 503
            HDFQMLFAPCC  CGEFIIGRVIKAMNN+WHP CFRC+LC   LAD+GFVKNAGRHLCRP
Sbjct: 61   HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP 120

Query: 504  CHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGELY 683
            CHNREKA+GLGKYICQ+CH +IDEQPL+F+ND YHPDHFNC +CGKELTA+ARELKGELY
Sbjct: 121  CHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY 180

Query: 684  CLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYC 863
            CLPCHDKMGVPICGACRRPIEGRVVNA+GKQWHVEHFVCAKCEKPFLGHRHYE+KGLAYC
Sbjct: 181  CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC 240

Query: 864  ETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVC 1043
            ETHYNQLFGDVC++C+ VIEGDVVSALNKAWCVNCF+CSTCN++LTLKNKFVEFDMKPVC
Sbjct: 241  ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVC 300

Query: 1044 KRCY 1055
            K+CY
Sbjct: 301  KKCY 304


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 76,664,111
Number of extensions: 2308975
Number of successful extensions: 11133
Number of sequences better than 1.0e-05: 102
Number of HSP's gapped: 10165
Number of HSP's successfully gapped: 306
Length of query: 594
Length of database: 18,297,164
Length adjustment: 108
Effective length of query: 486
Effective length of database: 14,737,052
Effective search space: 7162207272
Effective search space used: 7162207272
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002552
         (1783 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_659111.1| LIM and senescent cell antigen-like-containing ...   664   0.0  
Alignment   gi|NP_080424.2| LIM and senescent cell antigen-like-containing ...   617   e-177
Alignment   gi|NP_957694.1| LIM and senescent cell antigen-like-containing ...   613   e-175
Alignment   gi|NP_001180232.1| LIM and senescent cell antigen-like-containi...   605   e-173
Alignment   gi|NP_598676.2| paxillin isoform beta [Mus musculus].                143   4e-34
Alignment   gi|NP_035353.1| paxillin isoform alpha [Mus musculus].               143   4e-34
Alignment   gi|NP_598913.1| leupaxin [Mus musculus].                             142   8e-34
Alignment   gi|NP_033391.1| transforming growth factor beta-1-induced trans...   138   2e-32
Alignment   gi|NP_001177785.1| PDZ and LIM domain protein 5 isoform ENH1d [...   130   3e-30
Alignment   gi|NP_001177784.1| PDZ and LIM domain protein 5 isoform ENH1c [...   130   3e-30

>ref|NP_659111.1| LIM and senescent cell antigen-like-containing domain protein 2 [Mus
            musculus].
          Length = 341

 Score =  664 bits (1713), Expect = 0.0
 Identities = 295/340 (86%), Positives = 313/340 (92%)
 Frame = +3

Query: 129  MTGSNMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEG 308
            MTGSNMS  LA+A+CQRCQARFAP+ERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEG
Sbjct: 1    MTGSNMSECLADAMCQRCQARFAPTERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEG 60

Query: 309  RKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGR 488
            RKYCEHDFQMLFAPCCG CGEF+IGRVIKAMN NWHPGCFRCELCDVELADLGFVKNAGR
Sbjct: 61   RKYCEHDFQMLFAPCCGFCGEFVIGRVIKAMNANWHPGCFRCELCDVELADLGFVKNAGR 120

Query: 489  HLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAREL 668
            HLCRPCHNREKAKGLGK+ICQRCHL IDEQPLMF+ND YHPDHF+C++CGKELT++AREL
Sbjct: 121  HLCRPCHNREKAKGLGKFICQRCHLAIDEQPLMFKNDPYHPDHFSCSNCGKELTSDAREL 180

Query: 669  KGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKK 848
            KGELYCLPCHDKMG+PICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKK
Sbjct: 181  KGELYCLPCHDKMGIPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKK 240

Query: 849  GLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFD 1028
            GLAYCETHYNQLFGDVCYNCSHVIEGDVVSAL+KAWCVNCFSCSTCN +LTLKNKFVEFD
Sbjct: 241  GLAYCETHYNQLFGDVCYNCSHVIEGDVVSALSKAWCVNCFSCSTCNMKLTLKNKFVEFD 300

Query: 1029 MKPVCKRCYXXXXXXXXXXXXXXXXXVARRAQPKSSGLHS 1148
            MKPVCKRCY                  +R+AQPKS  ++S
Sbjct: 301  MKPVCKRCYERFPLELKKRLKKLSDLSSRKAQPKSVDVNS 340


>ref|NP_080424.2| LIM and senescent cell antigen-like-containing domain protein 1
            isoform 1 [Mus musculus].
          Length = 337

 Score =  617 bits (1592), Expect = e-177
 Identities = 266/309 (86%), Positives = 293/309 (94%)
 Frame = +3

Query: 129  MTGSNMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEG 308
            MT SNM+NALA+A C+RC+  FAP+E+IVNSNGELYHE CFVCAQCF+ FPEGLFYEFEG
Sbjct: 8    MTNSNMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEG 67

Query: 309  RKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGR 488
            RKYCEHDFQMLFAPCC  CGEFIIGRVIKAMNN+WHP CFRC+LC   LAD+GFVKNAGR
Sbjct: 68   RKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGR 127

Query: 489  HLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAREL 668
            HLCRPCHNREKA+GLGKYICQ+CH +IDEQPL+F+ND YHPDHFNC +CGKELTA+AREL
Sbjct: 128  HLCRPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADAREL 187

Query: 669  KGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKK 848
            KGELYCLPCHDKMGVPICGACRRPIEGRVVNA+GKQWHVEHFVCAKCEKPFLGHRHYE+K
Sbjct: 188  KGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERK 247

Query: 849  GLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFD 1028
            GLAYCETHYNQLFGDVC++C+ VIEGDVVSALNKAWCV+CF+CSTCN++LTLKNKFVEFD
Sbjct: 248  GLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVSCFACSTCNTKLTLKNKFVEFD 307

Query: 1029 MKPVCKRCY 1055
            MKPVCK+CY
Sbjct: 308  MKPVCKKCY 316


>ref|NP_957694.1| LIM and senescent cell antigen-like-containing domain protein 1
            isoform 2 [Mus musculus].
          Length = 362

 Score =  613 bits (1582), Expect = e-175
 Identities = 264/306 (86%), Positives = 291/306 (95%)
 Frame = +3

Query: 138  SNMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKY 317
            SNM+NALA+A C+RC+  FAP+E+IVNSNGELYHE CFVCAQCF+ FPEGLFYEFEGRKY
Sbjct: 36   SNMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKY 95

Query: 318  CEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLC 497
            CEHDFQMLFAPCC  CGEFIIGRVIKAMNN+WHP CFRC+LC   LAD+GFVKNAGRHLC
Sbjct: 96   CEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLC 155

Query: 498  RPCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGE 677
            RPCHNREKA+GLGKYICQ+CH +IDEQPL+F+ND YHPDHFNC +CGKELTA+ARELKGE
Sbjct: 156  RPCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGE 215

Query: 678  LYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLA 857
            LYCLPCHDKMGVPICGACRRPIEGRVVNA+GKQWHVEHFVCAKCEKPFLGHRHYE+KGLA
Sbjct: 216  LYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLA 275

Query: 858  YCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKP 1037
            YCETHYNQLFGDVC++C+ VIEGDVVSALNKAWCV+CF+CSTCN++LTLKNKFVEFDMKP
Sbjct: 276  YCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVSCFACSTCNTKLTLKNKFVEFDMKP 335

Query: 1038 VCKRCY 1055
            VCK+CY
Sbjct: 336  VCKKCY 341


>ref|NP_001180232.1| LIM and senescent cell antigen-like-containing domain protein 1
            isoform 3 [Mus musculus].
          Length = 396

 Score =  605 bits (1560), Expect = e-173
 Identities = 260/305 (85%), Positives = 288/305 (94%)
 Frame = +3

Query: 141  NMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYC 320
            NM+NALA+A C+RC+  FAP+E+IVNSNGELYHE CFVCAQCF+ FPEGLFYEFEGRKYC
Sbjct: 62   NMANALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYC 121

Query: 321  EHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCR 500
            EHDFQMLFAPCC  CGEFIIGRVIKAMNN+WHP CFRC+LC   LAD+GFVKNAGRHLCR
Sbjct: 122  EHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCR 181

Query: 501  PCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGEL 680
            PCHNREKA+GLGKYICQ+CH +IDEQPL+F+ND YHPDHFNC +CGKELTA+ARELKGEL
Sbjct: 182  PCHNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGEL 241

Query: 681  YCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAY 860
            YCLPCHDKMGVPICGACRRPIEGRVVNA+GKQWHVEHFVCAKCEKPFLGHRHYE+KGLAY
Sbjct: 242  YCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAY 301

Query: 861  CETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPV 1040
            CETHYNQLFGDVC++C+ VIEGDVVSALNKAWCV+CF+CSTCN++LTLK+KFVE D+KPV
Sbjct: 302  CETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVSCFACSTCNTKLTLKDKFVEIDLKPV 361

Query: 1041 CKRCY 1055
            CK CY
Sbjct: 362  CKYCY 366


>ref|NP_598676.2| paxillin isoform beta [Mus musculus].
          Length = 591

 Score =  143 bits (361), Expect = 4e-34
 Identities = 77/235 (32%), Positives = 112/235 (47%), Gaps = 1/235 (0%)
 Frame = +3

Query: 354  CGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGL 533
            CG+C + I G+V+ AM   WHP  F C  C  E+    F +  G+  C   ++      L
Sbjct: 358  CGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYH-----SL 412

Query: 534  GKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYCLPCHDKMG 710
                C  C+  I ++ +   +  +HP+HF C  CG     E   E  G+ YC   +  M 
Sbjct: 413  FSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMF 472

Query: 711  VPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFG 890
             P CG C R I    ++AL   WH E FVC +C  PF+    +E  G  YCE HY++  G
Sbjct: 473  APKCGGCARAILENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRG 532

Query: 891  DVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
             +C  C   I G  ++A+ K +    F C+ C  +L  K  F E + KP C+ C+
Sbjct: 533  SLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLN-KGTFKEQNDKPYCQSCF 586



 Score =  132 bits (332), Expect = 9e-31
 Identities = 77/246 (31%), Positives = 117/246 (47%), Gaps = 2/246 (0%)
 Frame = +3

Query: 156  LANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQ 335
            +A  VC  C+   A   ++V + G+ +H   FVC  C        F+E +G+ YCE D+ 
Sbjct: 353  VAKGVCGACKKPIAG--QVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYH 410

Query: 336  MLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNR 515
             LF+P C  C   I+ +V+ A++  WHP  F C  C       GF +  G+  CR  +  
Sbjct: 411  SLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD 470

Query: 516  EKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKE-LTAEARELKGELYC-L 689
              A       C  C   I E  +   N  +HP+ F C  C    +     E  G+ YC +
Sbjct: 471  MFAPK-----CGGCARAILENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEV 525

Query: 690  PCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCET 869
              H++ G  +C  C++PI GR + A+ K++H EHFVCA C K        E+    YC++
Sbjct: 526  HYHERRG-SLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQS 584

Query: 870  HYNQLF 887
             + +LF
Sbjct: 585  CFVKLF 590



 Score =  117 bits (293), Expect = 3e-26
 Identities = 62/176 (35%), Positives = 85/176 (48%), Gaps = 1/176 (0%)
 Frame = +3

Query: 531  LGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKEL-TAEARELKGELYCLPCHDKM 707
            + K +C  C   I  Q +      +HP+HF CTHC +E+ +    E  G+ YC   +  +
Sbjct: 353  VAKGVCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHSL 412

Query: 708  GVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 887
              P C  C  PI  +VV AL + WH EHF CA+C   F     +EK G AYC   Y  +F
Sbjct: 413  FSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMF 472

Query: 888  GDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
               C  C+  I  + +SALN  W   CF C  C +   +   F E D +P C+  Y
Sbjct: 473  APKCGGCARAILENYISALNTLWHPECFVCRECFTPF-VNGSFFEHDGQPYCEVHY 527



 Score =  101 bits (251), Expect = 2e-21
 Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 5/145 (3%)
 Frame = +3

Query: 636  GKELTAEARELKGELYCLPCHDKMGVP-----ICGACRRPIEGRVVNALGKQWHVEHFVC 800
            G +L +    L+ +L      +K+GV      +CGAC++PI G+VV A+GK WH EHFVC
Sbjct: 331  GSQLDSMLGSLQSDL------NKLGVATVAKGVCGACKKPIAGQVVTAMGKTWHPEHFVC 384

Query: 801  AKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCS 980
              C++       +E+ G  YCE  Y+ LF   CY C+  I   VV+AL++ W    F C+
Sbjct: 385  THCQEEIGSRNFFERDGQPYCEKDYHSLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCA 444

Query: 981  TCNSRLTLKNKFVEFDMKPVCKRCY 1055
             C +    +  F E D K  C++ Y
Sbjct: 445  QCGAFFGPEG-FHEKDGKAYCRKDY 468


>ref|NP_035353.1| paxillin isoform alpha [Mus musculus].
          Length = 557

 Score =  143 bits (361), Expect = 4e-34
 Identities = 77/235 (32%), Positives = 112/235 (47%), Gaps = 1/235 (0%)
 Frame = +3

Query: 354  CGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGL 533
            CG+C + I G+V+ AM   WHP  F C  C  E+    F +  G+  C   ++      L
Sbjct: 324  CGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYH-----SL 378

Query: 534  GKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYCLPCHDKMG 710
                C  C+  I ++ +   +  +HP+HF C  CG     E   E  G+ YC   +  M 
Sbjct: 379  FSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMF 438

Query: 711  VPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFG 890
             P CG C R I    ++AL   WH E FVC +C  PF+    +E  G  YCE HY++  G
Sbjct: 439  APKCGGCARAILENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRG 498

Query: 891  DVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
             +C  C   I G  ++A+ K +    F C+ C  +L  K  F E + KP C+ C+
Sbjct: 499  SLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLN-KGTFKEQNDKPYCQSCF 552



 Score =  132 bits (332), Expect = 9e-31
 Identities = 77/246 (31%), Positives = 117/246 (47%), Gaps = 2/246 (0%)
 Frame = +3

Query: 156  LANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQ 335
            +A  VC  C+   A   ++V + G+ +H   FVC  C        F+E +G+ YCE D+ 
Sbjct: 319  VAKGVCGACKKPIAG--QVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYH 376

Query: 336  MLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNR 515
             LF+P C  C   I+ +V+ A++  WHP  F C  C       GF +  G+  CR  +  
Sbjct: 377  SLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD 436

Query: 516  EKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKE-LTAEARELKGELYC-L 689
              A       C  C   I E  +   N  +HP+ F C  C    +     E  G+ YC +
Sbjct: 437  MFAPK-----CGGCARAILENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEV 491

Query: 690  PCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCET 869
              H++ G  +C  C++PI GR + A+ K++H EHFVCA C K        E+    YC++
Sbjct: 492  HYHERRG-SLCSGCQKPITGRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQS 550

Query: 870  HYNQLF 887
             + +LF
Sbjct: 551  CFVKLF 556



 Score =  117 bits (293), Expect = 3e-26
 Identities = 62/176 (35%), Positives = 85/176 (48%), Gaps = 1/176 (0%)
 Frame = +3

Query: 531  LGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKEL-TAEARELKGELYCLPCHDKM 707
            + K +C  C   I  Q +      +HP+HF CTHC +E+ +    E  G+ YC   +  +
Sbjct: 319  VAKGVCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHSL 378

Query: 708  GVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLF 887
              P C  C  PI  +VV AL + WH EHF CA+C   F     +EK G AYC   Y  +F
Sbjct: 379  FSPRCYYCNGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMF 438

Query: 888  GDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
               C  C+  I  + +SALN  W   CF C  C +   +   F E D +P C+  Y
Sbjct: 439  APKCGGCARAILENYISALNTLWHPECFVCRECFTPF-VNGSFFEHDGQPYCEVHY 493



 Score =  101 bits (251), Expect = 2e-21
 Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 5/145 (3%)
 Frame = +3

Query: 636  GKELTAEARELKGELYCLPCHDKMGVP-----ICGACRRPIEGRVVNALGKQWHVEHFVC 800
            G +L +    L+ +L      +K+GV      +CGAC++PI G+VV A+GK WH EHFVC
Sbjct: 297  GSQLDSMLGSLQSDL------NKLGVATVAKGVCGACKKPIAGQVVTAMGKTWHPEHFVC 350

Query: 801  AKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCS 980
              C++       +E+ G  YCE  Y+ LF   CY C+  I   VV+AL++ W    F C+
Sbjct: 351  THCQEEIGSRNFFERDGQPYCEKDYHSLFSPRCYYCNGPILDKVVTALDRTWHPEHFFCA 410

Query: 981  TCNSRLTLKNKFVEFDMKPVCKRCY 1055
             C +    +  F E D K  C++ Y
Sbjct: 411  QCGAFFGPEG-FHEKDGKAYCRKDY 434


>ref|NP_598913.1| leupaxin [Mus musculus].
          Length = 386

 Score =  142 bits (358), Expect = 8e-34
 Identities = 78/235 (33%), Positives = 113/235 (48%), Gaps = 1/235 (0%)
 Frame = +3

Query: 354  CGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGL 533
            C SC + I G+VI A+  +WHP  F C  C  EL    F + +G   C   ++R     L
Sbjct: 152  CASCQKPIAGKVIHALGQSWHPEHFVCTHCKEELGSSPFFERSGLAYCSKDYHR-----L 206

Query: 534  GKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYCLPCHDKMG 710
                C  C   I ++ L   N  +HP+HF C+HCG+   AE   E   + YC      M 
Sbjct: 207  FSPRCAYCAAPITDKVLTAMNKTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFLAMF 266

Query: 711  VPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFG 890
             P CG C RP+    ++A+   WH E FVC  C   F     +E  G  +CE HY+   G
Sbjct: 267  SPKCGGCNRPVLENYLSAMNTVWHPECFVCGDCFSSFSSGSFFELDGRPFCELHYHHRRG 326

Query: 891  DVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
             +C++C   I G  +SA+   +    F C+ C ++L  K  F E + K  C++C+
Sbjct: 327  TLCHDCGQPITGRCISAMGHKFHPEHFVCAFCLTQLP-KGIFKEQNNKTYCEKCF 380



 Score =  126 bits (317), Expect = 5e-29
 Identities = 75/241 (31%), Positives = 110/241 (45%), Gaps = 2/241 (0%)
 Frame = +3

Query: 171 CQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAP 350
           C  CQ   A   +++++ G+ +H   FVC  C        F+E  G  YC  D+  LF+P
Sbjct: 152 CASCQKPIAG--KVIHALGQSWHPEHFVCTHCKEELGSSPFFERSGLAYCSKDYHRLFSP 209

Query: 351 CCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKG 530
            C  C   I  +V+ AMN  WHP  F C  C       GF +   +  C     R+    
Sbjct: 210 RCAYCAAPITDKVLTAMNKTWHPEHFFCSHCGEVFGAEGFHEKDKKPYC-----RKDFLA 264

Query: 531 LGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYC-LPCHDK 704
           +    C  C+  + E  L   N  +HP+ F C  C    ++ +  EL G  +C L  H +
Sbjct: 265 MFSPKCGGCNRPVLENYLSAMNTVWHPECFVCGDCFSSFSSGSFFELDGRPFCELHYHHR 324

Query: 705 MGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQL 884
            G  +C  C +PI GR ++A+G ++H EHFVCA C          E+    YCE  + +L
Sbjct: 325 RGT-LCHDCGQPITGRCISAMGHKFHPEHFVCAFCLTQLPKGIFKEQNNKTYCEKCFTKL 383

Query: 885 F 887
           F
Sbjct: 384 F 384



 Score =  112 bits (280), Expect = 9e-25
 Identities = 56/174 (32%), Positives = 83/174 (47%), Gaps = 1/174 (0%)
 Frame = +3

Query: 537  KYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKEL-TAEARELKGELYCLPCHDKMGV 713
            K  C  C   I  + +     ++HP+HF CTHC +EL ++   E  G  YC   + ++  
Sbjct: 149  KGYCASCQKPIAGKVIHALGQSWHPEHFVCTHCKEELGSSPFFERSGLAYCSKDYHRLFS 208

Query: 714  PICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGD 893
            P C  C  PI  +V+ A+ K WH EHF C+ C + F     +EK    YC   +  +F  
Sbjct: 209  PRCAYCAAPITDKVLTAMNKTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFLAMFSP 268

Query: 894  VCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
             C  C+  +  + +SA+N  W   CF C  C S  +    F E D +P C+  Y
Sbjct: 269  KCGGCNRPVLENYLSAMNTVWHPECFVCGDCFSSFS-SGSFFELDGRPFCELHY 321


>ref|NP_033391.1| transforming growth factor beta-1-induced transcript 1 protein [Mus
            musculus].
          Length = 444

 Score =  138 bits (347), Expect = 2e-32
 Identities = 75/235 (31%), Positives = 109/235 (46%), Gaps = 1/235 (0%)
 Frame = +3

Query: 354  CGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGL 533
            CGSC + I G+V+ A+   WHP  F C  C   L    F +  G   C  C+    +   
Sbjct: 211  CGSCNKPIAGQVVTALGRAWHPEHFLCSGCSTTLGGSSFFEKDGAPFCPECYFERFSPR- 269

Query: 534  GKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYCLPCHDKMG 710
                C  C+  I  + +      +HP+HF C  CG+    E   E +G  YC     ++ 
Sbjct: 270  ----CGFCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQLF 325

Query: 711  VPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFG 890
             P C  C+ PI    ++AL   WH + FVC +C  PF G   +E +G   CE H++   G
Sbjct: 326  APRCQGCQGPILDNYISALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFHAQRG 385

Query: 891  DVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
             +C  C   + G  VSAL + +  + F+C+ C   LT K  F E   KP C+ C+
Sbjct: 386  SLCATCGLPVTGRCVSALGRRFHPDHFTCTFCLRPLT-KGSFQERASKPYCQPCF 439



 Score =  116 bits (290), Expect = 6e-26
 Identities = 61/177 (34%), Positives = 89/177 (50%), Gaps = 1/177 (0%)
 Frame = +3

Query: 519  KAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAR-ELKGELYCLPC 695
            +AKGL    C  C+  I  Q +     A+HP+HF C+ C   L   +  E  G  +C  C
Sbjct: 206  QAKGL----CGSCNKPIAGQVVTALGRAWHPEHFLCSGCSTTLGGSSFFEKDGAPFCPEC 261

Query: 696  HDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHY 875
            + +   P CG C +PI  ++V ALG  WH EHF C  C +PF     +E++G  YC   +
Sbjct: 262  YFERFSPRCGFCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDF 321

Query: 876  NQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCK 1046
             QLF   C  C   I  + +SAL+  W  +CF C  C +  +    F E + +P+C+
Sbjct: 322  LQLFAPRCQGCQGPILDNYISALSALWHPDCFVCRECLAPFS-GGSFFEHEGRPLCE 377



 Score =  115 bits (287), Expect = 1e-25
 Identities = 68/245 (27%), Positives = 107/245 (43%), Gaps = 1/245 (0%)
 Frame = +3

Query: 159 ANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQM 338
           A  +C  C    A   ++V + G  +H   F+C+ C        F+E +G  +C   +  
Sbjct: 207 AKGLCGSCNKPIAG--QVVTALGRAWHPEHFLCSGCSTTLGGSSFFEKDGAPFCPECYFE 264

Query: 339 LFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNRE 518
            F+P CG C + I  +++ A+  +WHP  F C  C     + GF +  GR  C     R 
Sbjct: 265 RFSPRCGFCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYC-----RR 319

Query: 519 KAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYCLPC 695
               L    CQ C   I +  +   +  +HPD F C  C    +  +  E +G   C   
Sbjct: 320 DFLQLFAPRCQGCQGPILDNYISALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENH 379

Query: 696 HDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHY 875
                  +C  C  P+ GR V+ALG+++H +HF C  C +P       E+    YC+  +
Sbjct: 380 FHAQRGSLCATCGLPVTGRCVSALGRRFHPDHFTCTFCLRPLTKGSFQERASKPYCQPCF 439

Query: 876 NQLFG 890
            +LFG
Sbjct: 440 LKLFG 444



 Score =  113 bits (283), Expect = 4e-25
 Identities = 66/205 (32%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
 Frame = +3

Query: 126 TMTGSNMSNALANAVCQRCQ-ARFAPS---------ERIVNSNGELYHEHCFVCAQCFRP 275
           T+ GS+         C  C   RF+P           ++V + G  +H   F C  C  P
Sbjct: 243 TLGGSSFFEKDGAPFCPECYFERFSPRCGFCNQPIRHKMVTALGTHWHPEHFCCVSCGEP 302

Query: 276 FPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVEL 455
           F E  F+E EGR YC  DF  LFAP C  C   I+   I A++  WHP CF C  C    
Sbjct: 303 FGEEGFHEREGRPYCRRDFLQLFAPRCQGCQGPILDNYISALSALWHPDCFVCRECLAPF 362

Query: 456 ADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHC 635
           +   F ++ GR LC    + ++       +C  C L +  + +      +HPDHF CT C
Sbjct: 363 SGGSFFEHEGRPLCENHFHAQRGS-----LCATCGLPVTGRCVSALGRRFHPDHFTCTFC 417

Query: 636 GKELT-AEARELKGELYCLPCHDKM 707
            + LT    +E   + YC PC  K+
Sbjct: 418 LRPLTKGSFQERASKPYCQPCFLKL 442


>ref|NP_001177785.1| PDZ and LIM domain protein 5 isoform ENH1d [Mus musculus].
          Length = 574

 Score =  130 bits (328), Expect = 3e-30
 Identities = 70/172 (40%), Positives = 92/172 (53%), Gaps = 3/172 (1%)
 Frame = +3

Query: 543  ICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAR-ELKGELYCLPCHDKMGVPI 719
            +C  C+ VI    L+    ++HP+ FNC HC   +      E KG LYC  C++K   P 
Sbjct: 397  MCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPE 456

Query: 720  CGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVC 899
            CG C+R I G V+NAL + WHV  FVC  C KP   +  + + G  YCET Y  LFG +C
Sbjct: 457  CGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTIC 516

Query: 900  YNCSHVIE-GDV-VSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKR 1049
              C   IE GD+ + AL   W   CF CS C   L  +  F + D KP+CK+
Sbjct: 517  RGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKD-KPLCKK 567



 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 55/178 (30%), Positives = 76/178 (42%), Gaps = 3/178 (1%)
 Frame = +3

Query: 348 PCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAK 527
           P C  C + I G  + A+  +WHP  F C  C   +A +GFV+  G   C  C+ +  A 
Sbjct: 396 PMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAP 455

Query: 528 GLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELK-GELYCLPCHDK 704
                 C RC   I  + +      +H   F C  CGK +      L+ GE YC   +  
Sbjct: 456 E-----CGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYA 510

Query: 705 MGVPICGACRRPIEG--RVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETH 872
           +   IC  C  PIE     + ALG  WH   FVC+ C +   G   + KK    C+ H
Sbjct: 511 LFGTICRGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKH 568



 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 43/114 (37%), Positives = 57/114 (50%)
 Frame = +3

Query: 714  PICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGD 893
            P+C  C + I G  + ALGK WH E F CA C+         E+KG  YCE  Y + F  
Sbjct: 396  PMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAP 455

Query: 894  VCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
             C  C   I G+V++AL + W V+CF C  C   +   N F   D +P C+  Y
Sbjct: 456  ECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIR-NNVFHLEDGEPYCETDY 508



 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
 Frame = +3

Query: 171 CQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAP 350
           C RCQ +      ++N+  + +H  CFVC  C +P    +F+  +G  YCE D+  LF  
Sbjct: 457 CGRCQRKILGE--VINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGT 514

Query: 351 CCGSCGEFII---GRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCR 500
            C  C EF I      ++A+   WH  CF C +C   L    F     + LC+
Sbjct: 515 ICRGC-EFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCK 566



 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 43/146 (29%), Positives = 59/146 (40%), Gaps = 2/146 (1%)
 Frame = +3

Query: 225 GELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMN 404
           G+ +H   F CA C        F E +G  YCE  ++  FAP CG C   I+G VI A+ 
Sbjct: 414 GKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPECGRCQRKILGEVINALK 473

Query: 405 NNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQPL 584
             WH  CF C  C   + +  F    G   C   +       L   IC+ C   I+   +
Sbjct: 474 QTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDY-----YALFGTICRGCEFPIEAGDM 528

Query: 585 MFRNDAY--HPDHFNCTHCGKELTAE 656
                 Y  H   F C+ C + L  +
Sbjct: 529 FLEALGYTWHDTCFVCSVCCESLEGQ 554


>ref|NP_001177784.1| PDZ and LIM domain protein 5 isoform ENH1c [Mus musculus].
          Length = 526

 Score =  130 bits (328), Expect = 3e-30
 Identities = 70/172 (40%), Positives = 92/172 (53%), Gaps = 3/172 (1%)
 Frame = +3

Query: 543  ICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAR-ELKGELYCLPCHDKMGVPI 719
            +C  C+ VI    L+    ++HP+ FNC HC   +      E KG LYC  C++K   P 
Sbjct: 349  MCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPE 408

Query: 720  CGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVC 899
            CG C+R I G V+NAL + WHV  FVC  C KP   +  + + G  YCET Y  LFG +C
Sbjct: 409  CGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTIC 468

Query: 900  YNCSHVIE-GDV-VSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKR 1049
              C   IE GD+ + AL   W   CF CS C   L  +  F + D KP+CK+
Sbjct: 469  RGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKD-KPLCKK 519



 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 55/178 (30%), Positives = 76/178 (42%), Gaps = 3/178 (1%)
 Frame = +3

Query: 348 PCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAK 527
           P C  C + I G  + A+  +WHP  F C  C   +A +GFV+  G   C  C+ +  A 
Sbjct: 348 PMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAP 407

Query: 528 GLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELK-GELYCLPCHDK 704
                 C RC   I  + +      +H   F C  CGK +      L+ GE YC   +  
Sbjct: 408 E-----CGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYA 462

Query: 705 MGVPICGACRRPIEG--RVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETH 872
           +   IC  C  PIE     + ALG  WH   FVC+ C +   G   + KK    C+ H
Sbjct: 463 LFGTICRGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKH 520



 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 43/114 (37%), Positives = 57/114 (50%)
 Frame = +3

Query: 714  PICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGD 893
            P+C  C + I G  + ALGK WH E F CA C+         E+KG  YCE  Y + F  
Sbjct: 348  PMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAP 407

Query: 894  VCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
             C  C   I G+V++AL + W V+CF C  C   +   N F   D +P C+  Y
Sbjct: 408  ECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIR-NNVFHLEDGEPYCETDY 460



 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
 Frame = +3

Query: 171 CQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAP 350
           C RCQ +      ++N+  + +H  CFVC  C +P    +F+  +G  YCE D+  LF  
Sbjct: 409 CGRCQRKILGE--VINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGT 466

Query: 351 CCGSCGEFII---GRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCR 500
            C  C EF I      ++A+   WH  CF C +C   L    F     + LC+
Sbjct: 467 ICRGC-EFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCK 518



 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 43/146 (29%), Positives = 59/146 (40%), Gaps = 2/146 (1%)
 Frame = +3

Query: 225 GELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMN 404
           G+ +H   F CA C        F E +G  YCE  ++  FAP CG C   I+G VI A+ 
Sbjct: 366 GKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPECGRCQRKILGEVINALK 425

Query: 405 NNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQPL 584
             WH  CF C  C   + +  F    G   C   +       L   IC+ C   I+   +
Sbjct: 426 QTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDY-----YALFGTICRGCEFPIEAGDM 480

Query: 585 MFRNDAY--HPDHFNCTHCGKELTAE 656
                 Y  H   F C+ C + L  +
Sbjct: 481 FLEALGYTWHDTCFVCSVCCESLEGQ 506


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 64,738,774
Number of extensions: 1916018
Number of successful extensions: 9206
Number of sequences better than 1.0e-05: 77
Number of HSP's gapped: 8454
Number of HSP's successfully gapped: 245
Length of query: 594
Length of database: 15,617,559
Length adjustment: 107
Effective length of query: 487
Effective length of database: 12,403,707
Effective search space: 6040605309
Effective search space used: 6040605309
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002552
         (1783 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_003359555.1| PREDICTED: LIM and senescent cell antigen-li...   655   0.0  
Alignment   gi|XP_003133450.2| PREDICTED: LIM and senescent cell antigen-li...   647   0.0  
Alignment   gi|NP_001230787.1| LIM and senescent cell antigen-like domains ...   608   e-174
Alignment   gi|XP_003357122.1| PREDICTED: PDZ and LIM domain protein 5, par...   130   2e-30
Alignment   gi|NP_999540.1| four and a half LIM domains 1 protein, isoform ...   117   2e-26
Alignment   gi|XP_003124907.2| PREDICTED: four and a half LIM domains prote...   116   5e-26
Alignment   gi|XP_003357126.1| PREDICTED: PDZ and LIM domain protein 5-like...   115   8e-26
Alignment   gi|XP_003357125.1| PREDICTED: PDZ and LIM domain protein 5-like...   115   8e-26
Alignment   gi|XP_003127846.1| PREDICTED: four and a half LIM domains prote...   115   8e-26
Alignment   gi|XP_003359314.1| PREDICTED: hypothetical protein LOC100151883...   114   2e-25

>ref|XP_003359555.1| PREDICTED: LIM and senescent cell antigen-like-containing domain
            protein 2-like isoform 2 [Sus scrofa].
          Length = 293

 Score =  655 bits (1690), Expect = 0.0
 Identities = 293/293 (100%), Positives = 293/293 (100%)
 Frame = +3

Query: 129  MTGSNMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEG 308
            MTGSNMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEG
Sbjct: 1    MTGSNMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEG 60

Query: 309  RKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGR 488
            RKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGR
Sbjct: 61   RKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGR 120

Query: 489  HLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAREL 668
            HLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAREL
Sbjct: 121  HLCRPCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAREL 180

Query: 669  KGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKK 848
            KGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKK
Sbjct: 181  KGELYCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKK 240

Query: 849  GLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLK 1007
            GLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLK
Sbjct: 241  GLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLK 293


>ref|XP_003133450.2| PREDICTED: LIM and senescent cell antigen-like-containing domain
            protein 2-like isoform 1 [Sus scrofa].
          Length = 318

 Score =  647 bits (1670), Expect = 0.0
 Identities = 289/289 (100%), Positives = 289/289 (100%)
 Frame = +3

Query: 141  NMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYC 320
            NMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYC
Sbjct: 30   NMSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYC 89

Query: 321  EHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCR 500
            EHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCR
Sbjct: 90   EHDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCR 149

Query: 501  PCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGEL 680
            PCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGEL
Sbjct: 150  PCHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGEL 209

Query: 681  YCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAY 860
            YCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAY
Sbjct: 210  YCLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAY 269

Query: 861  CETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLK 1007
            CETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLK
Sbjct: 270  CETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLK 318


>ref|NP_001230787.1| LIM and senescent cell antigen-like domains 1 [Sus scrofa].
          Length = 325

 Score =  608 bits (1567), Expect = e-174
 Identities = 262/304 (86%), Positives = 288/304 (94%)
 Frame = +3

Query: 144  MSNALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCE 323
            M+NALANA C+RC+  FAP+E+IVNSNGELYHE CFVCAQCF+ FPEGLFYEFEGRKYCE
Sbjct: 1    MANALANASCERCRGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE 60

Query: 324  HDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRP 503
            HDFQMLFAPCC  CGEFIIGRVIKAMNN+WHP CFRC+LC   LAD+GFVKNAGRHLCRP
Sbjct: 61   HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRP 120

Query: 504  CHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGELY 683
            C NREKA+GLGKYICQ+CH +IDEQPL+F+ND YHPDHFNC +CGKELTA+ARELKGELY
Sbjct: 121  CRNREKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKELTADARELKGELY 180

Query: 684  CLPCHDKMGVPICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYC 863
            CLPCHDKMGVPICGACRRPIEGRVVNA+GKQWHVEHFVCAKCEKPFLGHRHYE+KGLAYC
Sbjct: 181  CLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYC 240

Query: 864  ETHYNQLFGDVCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVC 1043
            ETHYNQLFGDVC++C+ VIEGDVVSALNKAWCV+CF+CSTCN++LTLKNKFVEFDMKPVC
Sbjct: 241  ETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVSCFACSTCNTKLTLKNKFVEFDMKPVC 300

Query: 1044 KRCY 1055
            K+CY
Sbjct: 301  KKCY 304


>ref|XP_003357122.1| PREDICTED: PDZ and LIM domain protein 5, partial [Sus scrofa].
          Length = 226

 Score =  130 bits (328), Expect = 2e-30
 Identities = 69/172 (40%), Positives = 93/172 (54%), Gaps = 3/172 (1%)
 Frame = +3

Query: 543  ICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAR-ELKGELYCLPCHDKMGVPI 719
            +C  C+ VI    L+    ++HP+ FNC HC   +      E +G LYC  C++K   P 
Sbjct: 49   MCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFAPE 108

Query: 720  CGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVC 899
            CG C+R I G V+NAL + WHV  FVC  C KP   +  + + G  YCET Y  LFG +C
Sbjct: 109  CGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTIC 168

Query: 900  YNCSHVIE-GDV-VSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKR 1049
            + C   IE GD+ + AL   W   CF CS C   L  +  F + D KP+CK+
Sbjct: 169  HGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKD-KPLCKK 219



 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 55/178 (30%), Positives = 76/178 (42%), Gaps = 3/178 (1%)
 Frame = +3

Query: 348 PCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAK 527
           P C  C + I G  + A+  +WHP  F C  C   +A +GFV+  G   C  C+ +  A 
Sbjct: 48  PMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFAP 107

Query: 528 GLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELK-GELYCLPCHDK 704
                 C RC   I  + +      +H   F C  CGK +      L+ GE YC   +  
Sbjct: 108 E-----CGRCQRKILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYA 162

Query: 705 MGVPICGACRRPIEG--RVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETH 872
           +   IC  C  PIE     + ALG  WH   FVC+ C +   G   + KK    C+ H
Sbjct: 163 LFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKH 220



 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 42/114 (36%), Positives = 57/114 (50%)
 Frame = +3

Query: 714  PICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGD 893
            P+C  C + I G  + ALGK WH E F CA C+         E++G  YCE  Y + F  
Sbjct: 48   PMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFAP 107

Query: 894  VCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
             C  C   I G+V++AL + W V+CF C  C   +   N F   D +P C+  Y
Sbjct: 108  ECGRCQRKILGEVINALKQTWHVSCFVCVACGKPIR-NNVFHLEDGEPYCETDY 160



 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
 Frame = +3

Query: 171 CQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAP 350
           C RCQ +      ++N+  + +H  CFVC  C +P    +F+  +G  YCE D+  LF  
Sbjct: 109 CGRCQRKILGE--VINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGT 166

Query: 351 CCGSCGEFII---GRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCR 500
            C  C EF I      ++A+   WH  CF C +C   L    F     + LC+
Sbjct: 167 ICHGC-EFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCK 218



 Score = 68.9 bits (167), Expect = 8e-12
 Identities = 43/146 (29%), Positives = 58/146 (39%), Gaps = 2/146 (1%)
 Frame = +3

Query: 225 GELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMN 404
           G+ +H   F CA C        F E +G  YCE  ++  FAP CG C   I+G VI A+ 
Sbjct: 66  GKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFAPECGRCQRKILGEVINALK 125

Query: 405 NNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQPL 584
             WH  CF C  C   + +  F    G   C   +       L   IC  C   I+   +
Sbjct: 126 QTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDY-----YALFGTICHGCEFPIEAGDM 180

Query: 585 MFRNDAY--HPDHFNCTHCGKELTAE 656
                 Y  H   F C+ C + L  +
Sbjct: 181 FLEALGYTWHDTCFVCSVCCESLEGQ 206


>ref|NP_999540.1| four and a half LIM domains 1 protein, isoform C [Sus scrofa].
          Length = 296

 Score =  117 bits (294), Expect = 2e-26
 Identities = 79/279 (28%), Positives = 111/279 (39%), Gaps = 11/279 (3%)
 Frame = +3

Query: 249  FVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFI--IGRVIKAMNNNWHPG 422
            F C  C  P     + + +G   C   F    A  C  C + I    + +   N  WH  
Sbjct: 21   FDCHYCRDPLQGKKYVQKDGHHCCLKCFDKFCANTCVECRKPIGADSKEVHYKNRYWHDT 80

Query: 423  CFRCELCDVELADLGFVKNAGRHLCRPCHNRE---KAKGLGKYICQRCHLVIDEQPLMFR 593
            CFRC  C   LA+  F+    + LC  C  RE   K KG  K I      V  +Q + ++
Sbjct: 81   CFRCSKCLHPLANETFMAKDNKILCNKCTTREDSPKCKGCFKPI------VAGDQNVEYK 134

Query: 594  NDAYHPDHFNCTHCGKELTAEARELKGE-LYCLPCHDKMGVPICGACRRPIEGRVVNALG 770
               +H D F C++C + +   +   KGE  YC+ CH+      C  C + I    +    
Sbjct: 135  GTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAKHCVKCNKAITSGGITYQD 194

Query: 771  KQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEG-----DVV 935
            + WH E FVC  C K   G R    +   YC   Y       C  C + I G      VV
Sbjct: 195  QPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITGFGKGSSVV 254

Query: 936  SALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRC 1052
            +   ++W   CF C  C+  L  K +FV    +  C  C
Sbjct: 255  AYEGQSWHDYCFHCKKCSVNLANK-RFVFHQEQVYCPDC 292



 Score = 97.4 bits (241), Expect = 2e-20
 Identities = 56/239 (23%), Positives = 91/239 (38%), Gaps = 8/239 (3%)
 Frame = +3

Query: 171 CQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAP 350
           C  C+       + V+     +H+ CF C++C  P     F   + +  C        +P
Sbjct: 56  CVECRKPIGADSKEVHYKNRYWHDTCFRCSKCLHPLANETFMAKDNKILCNKCTTREDSP 115

Query: 351 CCGSCGEFIIG--RVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKA 524
            C  C + I+   + ++     WH  CF C  C   +    F        C  CH  + A
Sbjct: 116 KCKGCFKPIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFA 175

Query: 525 KGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGELYCLPCHD 701
           K      C +C+  I    + +++  +H + F C  C K+L  +    ++ + YC+ C+ 
Sbjct: 176 KH-----CVKCNKAITSGGITYQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYK 230

Query: 702 KMGVPICGACRRPIEG-----RVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYC 863
                 C  C+ PI G      VV   G+ WH   F C KC       R    +   YC
Sbjct: 231 NFVAKKCAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYC 289



 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 45/185 (24%), Positives = 69/185 (37%), Gaps = 6/185 (3%)
 Frame = +3

Query: 171 CQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAP 350
           C+ C       ++ V   G ++H+ CF C+ C +    G F+      YC    +  FA 
Sbjct: 117 CKGCFKPIVAGDQNVEYKGTVWHKDCFTCSNCKQVIGTGSFFPKGEDFYCVTCHETKFAK 176

Query: 351 CCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKG 530
            C  C + I    I   +  WH  CF C  C  +LA   F     ++ C  C+    AK 
Sbjct: 177 HCVKCNKAITSGGITYQDQPWHAECFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKK 236

Query: 531 LGKYICQRCHLVI-----DEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGE-LYCLP 692
                C  C   I         + +   ++H   F+C  C   L  +      E +YC  
Sbjct: 237 -----CAGCKNPITGFGKGSSVVAYEGQSWHDYCFHCKKCSVNLANKRFVFHQEQVYCPD 291

Query: 693 CHDKM 707
           C  K+
Sbjct: 292 CAKKL 296


>ref|XP_003124907.2| PREDICTED: four and a half LIM domains protein 2-like isoform 2
           [Sus scrofa].
          Length = 256

 Score =  116 bits (290), Expect = 5e-26
 Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 6/232 (2%)
 Frame = +3

Query: 249 FVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMN---NNWHP 419
           F C  C        +   E + YC   F+ LFA  C  CG+ +IG   K ++    +WH 
Sbjct: 5   FDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGK-LIGCDCKDLSYKDRHWHE 63

Query: 420 GCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVI--DEQPLMFR 593
            CF C  C   L D  F     + LC  C+++E +       CQ C   I    + + ++
Sbjct: 64  ACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSR-----CQECRKAIMPGTRKMEYK 118

Query: 594 NDAYHPDHFNCTHCGKELTAEARELK-GELYCLPCHDKMGVPICGACRRPIEGRVVNALG 770
             ++H   F C  C + +  ++   K G+ +C+PC++K     C  C++PI    V    
Sbjct: 119 GSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYRE 178

Query: 771 KQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEG 926
           + WH E FVC  C+KP  G R   +   AYC   +  L+   C  C++ I G
Sbjct: 179 QPWHRECFVCTACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCTGCANPISG 230



 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 3/202 (1%)
 Frame = +3

Query: 153 ALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDF 332
           AL  + C+ C        + ++     +HE CF C++C     +  F   E +  C   +
Sbjct: 34  ALFASTCEECGKLIGCDCKDLSYKDRHWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCY 93

Query: 333 QMLFAPCCGSCGEFII--GRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPC 506
              ++  C  C + I+   R ++   ++WH  CF C  C   +    F+   G++ C PC
Sbjct: 94  SQEYSSRCQECRKAIMPGTRKMEYKGSSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPC 153

Query: 507 HNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKGEL-Y 683
           + ++ A       C +C   I    + +R   +H + F CT C K L+ +    + E  Y
Sbjct: 154 YEKQHA-----LQCIQCKKPITSGGVTYREQPWHRECFVCTACKKPLSGQRFTSRDEFAY 208

Query: 684 CLPCHDKMGVPICGACRRPIEG 749
           CL C   +    C  C  PI G
Sbjct: 209 CLGCFCDLYAKKCTGCANPISG 230



 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 51/215 (23%), Positives = 82/215 (38%), Gaps = 5/215 (2%)
 Frame = +3

Query: 426  FRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVI--DEQPLMFRND 599
            F C  C+  L    +V    +  C  C      + L    C+ C  +I  D + L +++ 
Sbjct: 5    FDCHHCENSLFGRKYVLREEQPYCVGCF-----EALFASTCEECGKLIGCDCKDLSYKDR 59

Query: 600  AYHPDHFNCTHCGKELTAEARELK-GELYCLPCHDKMGVPICGACRRPIEG--RVVNALG 770
             +H   F+C+ C   L  +    K  ++ C  C+ +     C  CR+ I    R +   G
Sbjct: 60   HWHEACFHCSRCRSSLVDKPFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKG 119

Query: 771  KQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDVVSALNK 950
              WH   F C +C++P        K G  +C   Y +     C  C   I    V+   +
Sbjct: 120  SSWHETCFTCHRCQQPIGTKSFIPKDGQNFCVPCYEKQHALQCIQCKKPITSGGVTYREQ 179

Query: 951  AWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
             W   CF C+ C   L+   +F   D    C  C+
Sbjct: 180  PWHRECFVCTACKKPLS-GQRFTSRDEFAYCLGCF 213



 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 34/134 (25%), Positives = 48/134 (35%), Gaps = 2/134 (1%)
 Frame = +3

Query: 786  EHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIEGDV--VSALNKAWC 959
            E F C  CE    G ++  ++   YC   +  LF   C  C  +I  D   +S  ++ W 
Sbjct: 3    ERFDCHHCENSLFGRKYVLREEQPYCVGCFEALFASTCEECGKLIGCDCKDLSYKDRHWH 62

Query: 960  VNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCYXXXXXXXXXXXXXXXXXVARRAQPKSSG 1139
              CF CS C S L  K  F   + + +C  CY                   R+ + K S 
Sbjct: 63   EACFHCSRCRSSLVDK-PFAAKEDQVLCTDCYSQEYSSRCQECRKAIMPGTRKMEYKGSS 121

Query: 1140 LHSA*EATCPCPAP 1181
             H        C  P
Sbjct: 122  WHETCFTCHRCQQP 135


>ref|XP_003357126.1| PREDICTED: PDZ and LIM domain protein 5-like isoform 4 [Sus scrofa].
          Length = 486

 Score =  115 bits (288), Expect = 8e-26
 Identities = 67/172 (38%), Positives = 91/172 (52%), Gaps = 3/172 (1%)
 Frame = +3

Query: 543  ICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAR-ELKGELYCLPCHDKMGVPI 719
            +C  C+ VI    L+    ++HP+ FNC HC   +      E +G LYC  C++K   P 
Sbjct: 310  MCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFAPE 369

Query: 720  CGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVC 899
            CG C+R I G V+NAL KQ  +  F    CEKP   +  + + G  YCET Y  LFG +C
Sbjct: 370  CGRCQRKILGEVINAL-KQPGMFLFCVCGCEKPIRNNVFHLEDGEPYCETDYYALFGTIC 428

Query: 900  YNCSHVIE-GDV-VSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKR 1049
            + C   IE GD+ + AL   W   CF CS C   L  +  F + D KP+CK+
Sbjct: 429  HGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKD-KPLCKK 479



 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 59/182 (32%), Positives = 80/182 (43%), Gaps = 7/182 (3%)
 Frame = +3

Query: 348 PCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAK 527
           P C  C + I G  + A+  +WHP  F C  C   +A +GFV+  G   C  C+ +  A 
Sbjct: 309 PMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFAP 368

Query: 528 GLGKYICQRCHL--VID--EQPLMFRNDAYHPDHFNCTHCGKELTAEARELK-GELYCLP 692
             G+  CQR  L  VI+  +QP MF         F    C K +      L+ GE YC  
Sbjct: 369 ECGR--CQRKILGEVINALKQPGMFL--------FCVCGCEKPIRNNVFHLEDGEPYCET 418

Query: 693 CHDKMGVPICGACRRPIEG--RVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCE 866
            +  +   IC  C  PIE     + ALG  WH   FVC+ C +   G   + KK    C+
Sbjct: 419 DYYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCK 478

Query: 867 TH 872
            H
Sbjct: 479 KH 480



 Score = 69.7 bits (169), Expect = 5e-12
 Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
 Frame = +3

Query: 714  PICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGD 893
            P+C  C + I G  + ALGK WH E F CA C+         E++G  YCE  Y + F  
Sbjct: 309  PMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFAP 368

Query: 894  VCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEF-DMKPVCKRCY 1055
             C  C   I G+V++AL +      F    C     ++N      D +P C+  Y
Sbjct: 369  ECGRCQRKILGEVINALKQP---GMFLFCVCGCEKPIRNNVFHLEDGEPYCETDY 420



 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 42/148 (28%), Positives = 58/148 (39%), Gaps = 4/148 (2%)
 Frame = +3

Query: 225 GELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMN 404
           G+ +H   F CA C        F E +G  YCE  ++  FAP CG C   I+G VI A+ 
Sbjct: 327 GKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFAPECGRCQRKILGEVINALK 386

Query: 405 NNWHPGCFRCELCDVE--LADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQ 578
               PG F   +C  E  + +  F    G   C   +       L   IC  C   I+  
Sbjct: 387 ---QPGMFLFCVCGCEKPIRNNVFHLEDGEPYCETDY-----YALFGTICHGCEFPIEAG 438

Query: 579 PLMFRNDAY--HPDHFNCTHCGKELTAE 656
            +      Y  H   F C+ C + L  +
Sbjct: 439 DMFLEALGYTWHDTCFVCSVCCESLEGQ 466


>ref|XP_003357125.1| PREDICTED: PDZ and LIM domain protein 5-like isoform 3 [Sus scrofa].
          Length = 595

 Score =  115 bits (288), Expect = 8e-26
 Identities = 67/172 (38%), Positives = 91/172 (52%), Gaps = 3/172 (1%)
 Frame = +3

Query: 543  ICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAR-ELKGELYCLPCHDKMGVPI 719
            +C  C+ VI    L+    ++HP+ FNC HC   +      E +G LYC  C++K   P 
Sbjct: 419  MCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFAPE 478

Query: 720  CGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVC 899
            CG C+R I G V+NAL KQ  +  F    CEKP   +  + + G  YCET Y  LFG +C
Sbjct: 479  CGRCQRKILGEVINAL-KQPGMFLFCVCGCEKPIRNNVFHLEDGEPYCETDYYALFGTIC 537

Query: 900  YNCSHVIE-GDV-VSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKR 1049
            + C   IE GD+ + AL   W   CF CS C   L  +  F + D KP+CK+
Sbjct: 538  HGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKD-KPLCKK 588



 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 59/182 (32%), Positives = 80/182 (43%), Gaps = 7/182 (3%)
 Frame = +3

Query: 348 PCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAK 527
           P C  C + I G  + A+  +WHP  F C  C   +A +GFV+  G   C  C+ +  A 
Sbjct: 418 PMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFAP 477

Query: 528 GLGKYICQRCHL--VID--EQPLMFRNDAYHPDHFNCTHCGKELTAEARELK-GELYCLP 692
             G+  CQR  L  VI+  +QP MF         F    C K +      L+ GE YC  
Sbjct: 478 ECGR--CQRKILGEVINALKQPGMFL--------FCVCGCEKPIRNNVFHLEDGEPYCET 527

Query: 693 CHDKMGVPICGACRRPIEG--RVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCE 866
            +  +   IC  C  PIE     + ALG  WH   FVC+ C +   G   + KK    C+
Sbjct: 528 DYYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCK 587

Query: 867 TH 872
            H
Sbjct: 588 KH 589



 Score = 69.7 bits (169), Expect = 5e-12
 Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
 Frame = +3

Query: 714  PICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGD 893
            P+C  C + I G  + ALGK WH E F CA C+         E++G  YCE  Y + F  
Sbjct: 418  PMCAHCNQVIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFAP 477

Query: 894  VCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEF-DMKPVCKRCY 1055
             C  C   I G+V++AL +      F    C     ++N      D +P C+  Y
Sbjct: 478  ECGRCQRKILGEVINALKQP---GMFLFCVCGCEKPIRNNVFHLEDGEPYCETDY 529



 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 42/148 (28%), Positives = 58/148 (39%), Gaps = 4/148 (2%)
 Frame = +3

Query: 225 GELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMN 404
           G+ +H   F CA C        F E +G  YCE  ++  FAP CG C   I+G VI A+ 
Sbjct: 436 GKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKFFAPECGRCQRKILGEVINALK 495

Query: 405 NNWHPGCFRCELCDVE--LADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVIDEQ 578
               PG F   +C  E  + +  F    G   C   +       L   IC  C   I+  
Sbjct: 496 ---QPGMFLFCVCGCEKPIRNNVFHLEDGEPYCETDY-----YALFGTICHGCEFPIEAG 547

Query: 579 PLMFRNDAY--HPDHFNCTHCGKELTAE 656
            +      Y  H   F C+ C + L  +
Sbjct: 548 DMFLEALGYTWHDTCFVCSVCCESLEGQ 575


>ref|XP_003127846.1| PREDICTED: four and a half LIM domains protein 3-like [Sus scrofa].
          Length = 280

 Score =  115 bits (288), Expect = 8e-26
 Identities = 64/233 (27%), Positives = 99/233 (42%), Gaps = 7/233 (3%)
 Frame = +3

Query: 150 NALANAVCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHD 329
           N  AN  C  CQ       R +      +HE CF C +C R   +  F   +    C   
Sbjct: 34  NTFANT-CAECQQLIGHDSRELFYEDRHFHEGCFRCCRCQRSLADEPFTCQDSELLCNDC 92

Query: 330 FQMLFAPCCGSCGEFII--GRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRP 503
           +   F+  C +CGE ++   R ++     WH  CF C  C+  L    FV + G H C P
Sbjct: 93  YCSAFSSQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSCSFVPDKGAHYCVP 152

Query: 504 CHNREKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEA-RELKGEL 680
           C+  + A       C RC   + +  + +R+  +H +   CT C   L  +       + 
Sbjct: 153 CYENKFAPR-----CARCSKTLTQGGVTYRDQPWHRECLVCTGCQTPLAGQQFTSRDDDP 207

Query: 681 YCLPCHDKMGVPICGACRRPIE----GRVVNALGKQWHVEHFVCAKCEKPFLG 827
           YC+ C  ++  P C +C+RPI     G+ V+   + WH   F CA+C    +G
Sbjct: 208 YCVACFGELFAPKCSSCKRPITGLGGGKYVSFEDRHWHHSCFSCARCSTSLVG 260



 Score =  112 bits (279), Expect = 9e-25
 Identities = 73/277 (26%), Positives = 114/277 (41%), Gaps = 9/277 (3%)
 Frame = +3

Query: 249  FVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFI--IGRVIKAMNNNWHPG 422
            F CA+C        + + +   YC   +   FA  C  C + I    R +   + ++H G
Sbjct: 5    FDCAKCSESLYGRKYIQTDNGPYCVPCYDNTFANTCAECQQLIGHDSRELFYEDRHFHEG 64

Query: 423  CFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKGLGKYICQRCHLVI--DEQPLMFRN 596
            CFRC  C   LAD  F       LC  C+    +       C  C   +    + L +  
Sbjct: 65   CFRCCRCQRSLADEPFTCQDSELLCNDCYCSAFSSQ-----CSACGETVMPGSRKLEYGG 119

Query: 597  DAYHPDHFNCTHCGKEL-TAEARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNALGK 773
              +H   F C+ C + L +      KG  YC+PC++    P C  C + +    V    +
Sbjct: 120  QTWHEHCFLCSGCEQPLGSCSFVPDKGAHYCVPCYENKFAPRCARCSKTLTQGGVTYRDQ 179

Query: 774  QWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVCYNCSHVIE----GDVVSA 941
             WH E  VC  C+ P  G +   +    YC   + +LF   C +C   I     G  VS 
Sbjct: 180  PWHRECLVCTGCQTPLAGQQFTSRDDDPYCVACFGELFAPKCSSCKRPITGLGGGKYVSF 239

Query: 942  LNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRC 1052
             ++ W  +CFSC+ C++ L +   FV    + +C+ C
Sbjct: 240  EDRHWHHSCFSCARCSTSL-VGQGFVPDGDQVLCQGC 275



 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 45/180 (25%), Positives = 66/180 (36%), Gaps = 5/180 (2%)
 Frame = +3

Query: 171 CQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAP 350
           C  C     P  R +   G+ +HEHCF+C+ C +P     F   +G  YC   ++  FAP
Sbjct: 101 CSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSCSFVPDKGAHYCVPCYENKFAP 160

Query: 351 CCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAKG 530
            C  C + +    +   +  WH  C  C  C   LA   F        C  C     A  
Sbjct: 161 RCARCSKTLTQGGVTYRDQPWHRECLVCTGCQTPLAGQQFTSRDDDPYCVACFGELFAPK 220

Query: 531 LGKYICQRCHLVI----DEQPLMFRNDAYHPDHFNCTHCGKELTAEARELKG-ELYCLPC 695
                C  C   I      + + F +  +H   F+C  C   L  +     G ++ C  C
Sbjct: 221 -----CSSCKRPITGLGGGKYVSFEDRHWHHSCFSCARCSTSLVGQGFVPDGDQVLCQGC 275


>ref|XP_003359314.1| PREDICTED: hypothetical protein LOC100151883 [Sus scrofa].
          Length = 715

 Score =  114 bits (284), Expect = 2e-25
 Identities = 58/172 (33%), Positives = 88/172 (51%), Gaps = 3/172 (1%)
 Frame = +3

Query: 543  ICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEAR-ELKGELYCLPCHDKMGVPI 719
            +C  C+ +I    L+    ++HP+ FNC +C   L      E +  +YC  C+++   P+
Sbjct: 538  LCGHCNSIIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPV 597

Query: 720  CGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGDVC 899
            C  C   I G V++AL + WH   FVCA C+KPF     + + G  YCE  Y  LF   C
Sbjct: 598  CAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFSTKC 657

Query: 900  YNCSHVIE-GD-VVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKR 1049
            + C   +E GD  + AL   W   CF C+ C+  L  +  + + D KP+CK+
Sbjct: 658  HGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKD-KPLCKK 708



 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 53/178 (29%), Positives = 74/178 (41%), Gaps = 3/178 (1%)
 Frame = +3

Query: 348  PCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHNREKAK 527
            P CG C   I G  + AM  +WHP  F C  C   LAD+ FV+      C  C+ +  A 
Sbjct: 537  PLCGHCNSIIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAP 596

Query: 528  GLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARELK-GELYCLPCHDK 704
                 +C +C+  I  + +      +H   F C  C K        ++ GE YC   +  
Sbjct: 597  -----VCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVN 651

Query: 705  MGVPICGACRRPIEG--RVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETH 872
            +    C  C  P+E   + + ALG  WH   F+CA C     G   Y KK    C+ H
Sbjct: 652  LFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKH 709



 Score = 83.6 bits (205), Expect = 3e-16
 Identities = 40/114 (35%), Positives = 56/114 (49%)
 Frame = +3

Query: 714  PICGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRHYEKKGLAYCETHYNQLFGD 893
            P+CG C   I G  + A+G+ WH E F CA C+         E++   YCE  Y Q F  
Sbjct: 537  PLCGHCNSIIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAP 596

Query: 894  VCYNCSHVIEGDVVSALNKAWCVNCFSCSTCNSRLTLKNKFVEFDMKPVCKRCY 1055
            VC  C+  I G+V+ AL + W   CF C+ C       + F   D +P C++ Y
Sbjct: 597  VCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFG-NSLFHMEDGEPYCEKDY 649



 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 13/126 (10%)
 Frame = +3

Query: 162 NAVCQRCQARF-AP---------SERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGR 311
           N  C+RC  +F AP            ++++  + +H  CFVCA C +PF   LF+  +G 
Sbjct: 583 NVYCERCYEQFFAPVCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGE 642

Query: 312 KYCEHDFQMLFAPCCGSCGEFII---GRVIKAMNNNWHPGCFRCELCDVELADLGFVKNA 482
            YCE D+  LF+  C  C +F +    + I+A+ + WH  CF C +C V L    F    
Sbjct: 643 PYCEKDYVNLFSTKCHGC-DFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKK 701

Query: 483 GRHLCR 500
            + LC+
Sbjct: 702 DKPLCK 707



 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 39/148 (26%), Positives = 54/148 (36%), Gaps = 23/148 (15%)
 Frame = +3

Query: 225 GELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQMLFAPCCGSCGEFIIGRVIKAMN 404
           G  +H   F CA C     +  F E +   YCE  ++  FAP C  C   I+G V+ A+ 
Sbjct: 555 GRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPVCAKCNTKIMGEVMHALR 614

Query: 405 NNWHPGCFRCELCDVELADLGFVKNAGRHLCR---------PCHNREKAKGLGK------ 539
             WH  CF C  C     +  F    G   C           CH  +     G       
Sbjct: 615 QTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFSTKCHGCDFPVEAGDKFIEAL 674

Query: 540 --------YICQRCHLVIDEQPLMFRND 599
                   +IC  CH+ ++ QP   + D
Sbjct: 675 GHTWHDTCFICAVCHVNLEGQPFYSKKD 702


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 48,883,630
Number of extensions: 1527030
Number of successful extensions: 6713
Number of sequences better than 1.0e-05: 42
Number of HSP's gapped: 6394
Number of HSP's successfully gapped: 107
Length of query: 594
Length of database: 11,343,932
Length adjustment: 105
Effective length of query: 489
Effective length of database: 8,729,747
Effective search space: 4268846283
Effective search space used: 4268846283
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-002552
         (1783 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr15                                                         755   0.0  
Sscrofa_Chr03                                                         127   2e-26

>Sscrofa_Chr15 
||          Length = 157681621

 Score =  755 bits (381), Expect = 0.0
 Identities = 406/413 (98%), Gaps = 1/413 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1343     gcagccccgggttagggcactggatgtggtgagcctgcgacaaggtctgcatccacagct 1402
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66435881 gcagccccgggttagggcactggatgtggtgagcctgcgacaaggtctgcatccacagct 66435822

                                                                            
Query: 1403     ccaacccaagaagcaaactggggccggggttacctagcccagcctgtcctgacctgttcc 1462
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66435821 ccaacccaagaagcaaactggggccggggttacctagcccagcctgtcctgacctgttcc 66435762

                                                                            
Query: 1463     atcccgatgggtggcttcatggctcatattctctgtggcagcttagccagcctcccccct 1522
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66435761 atcccgatgggtggcttcatggctcatattctctgtggcagcttagccagcctcccccct 66435702

                                                                            
Query: 1523     ggagggggccccacatgtgcacgtggcatgggtgtggcacccagccaggcagccacccgg 1582
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66435701 ggagggggccccacatgtgcacgtggcatgggtgtggcacccagccaggcagccacccgg 66435642

                                                                            
Query: 1583     gcagcttgtctgtcccacgaccacgcgctcaacctactgccagggcacgtgctcactctc 1642
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66435641 gcagcttgtctgtcccacgaccacgcgctcaacctactgccagggcacgtgctcactctc 66435582

                                                                            
Query: 1643     cccatgcagcctgggccca-gaggtggtgggctctgtgggggtacattcctgctctccaa 1701
                ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| 
Sbjct: 66435581 cccatgcagcctggggccaggaggtggtgggctctgtgggggtacattcctgctctccag 66435522

                                                                     
Query: 1702     aaaagaaagcacgggacctggcatccaactcacacttgcacaatgaatgaagg 1754
                | | || ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 66435521 agaggacagcacgggacctggcatccgactcacacttgcacaatgaatgaagg 66435469



 Score =  456 bits (230), Expect = e-125
 Identities = 230/230 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1007     gaacaagtttgtggagttcgacatgaagcccgtgtgtaagaggtgctatgagaagttccc 1066
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66436217 gaacaagtttgtggagttcgacatgaagcccgtgtgtaagaggtgctatgagaagttccc 66436158

                                                                            
Query: 1067     gctggagctgaagaagcggctgaagaagctgtcggagctggtggcccgcagggcacagcc 1126
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66436157 gctggagctgaagaagcggctgaagaagctgtcggagctggtggcccgcagggcacagcc 66436098

                                                                            
Query: 1127     caagtcctcaggcctccactctgcctgagaggccacctgcccatgtcctgctccagacag 1186
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66436097 caagtcctcaggcctccactctgcctgagaggccacctgcccatgtcctgctccagacag 66436038

                                                                  
Query: 1187     caacgcttctgcgggcggctttgctccccaccagcatcctgtatatgtag 1236
                ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66436037 caacgcttctgcgggcggctttgctccccaccagcatcctgtatatgtag 66435988



 Score =  321 bits (162), Expect = 7e-85
 Identities = 162/162 (100%)
 Strand = Plus / Minus

                                                                            
Query: 138      agtaacatgtccaacgccttggccaatgcggtgtgccagcgctgccaggcgcgctttgct 197
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66453007 agtaacatgtccaacgccttggccaatgcggtgtgccagcgctgccaggcgcgctttgct 66452948

                                                                            
Query: 198      ccctccgagcggatcgtcaacagcaacggagagctgtaccacgaacactgctttgtgtgt 257
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66452947 ccctccgagcggatcgtcaacagcaacggagagctgtaccacgaacactgctttgtgtgt 66452888

                                                          
Query: 258      gcgcagtgcttccggcccttcccggaggggctcttctatgag 299
                ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66452887 gcgcagtgcttccggcccttcccggaggggctcttctatgag 66452846



 Score =  307 bits (155), Expect = 1e-80
 Identities = 155/155 (100%)
 Strand = Plus / Minus

                                                                            
Query: 484      gcaggcatctgtgccgtccttgccacaaccgcgagaaggccaagggcctgggcaagtaca 543
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66439746 gcaggcatctgtgccgtccttgccacaaccgcgagaaggccaagggcctgggcaagtaca 66439687

                                                                            
Query: 544      tctgtcagcggtgccacctggtcatcgatgagcagcccctcatgttcaggaatgacgcct 603
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66439686 tctgtcagcggtgccacctggtcatcgatgagcagcccctcatgttcaggaatgacgcct 66439627

                                                   
Query: 604      accacccggatcacttcaactgcacccactgcggg 638
                |||||||||||||||||||||||||||||||||||
Sbjct: 66439626 accacccggatcacttcaactgcacccactgcggg 66439592



 Score =  301 bits (152), Expect = 7e-79
 Identities = 152/152 (100%)
 Strand = Plus / Minus

                                                                            
Query: 637      ggaaggagctgactgcagaagcccgggagctgaagggcgagctctactgcttgccgtgcc 696
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66438981 ggaaggagctgactgcagaagcccgggagctgaagggcgagctctactgcttgccgtgcc 66438922

                                                                            
Query: 697      atgacaagatgggtgtgcctatctgtggggcctgccgccggcccatcgagggccgtgtgg 756
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66438921 atgacaagatgggtgtgcctatctgtggggcctgccgccggcccatcgagggccgtgtgg 66438862

                                                
Query: 757      tcaacgcattagggaagcagtggcacgtggag 788
                ||||||||||||||||||||||||||||||||
Sbjct: 66438861 tcaacgcattagggaagcagtggcacgtggag 66438830



 Score =  244 bits (123), Expect = 1e-61
 Identities = 123/123 (100%)
 Strand = Plus / Minus

                                                                            
Query: 366      ggtgaattcatcattggccgtgttatcaaggccatgaacaacaactggcaccctgggtgc 425
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66450080 ggtgaattcatcattggccgtgttatcaaggccatgaacaacaactggcaccctgggtgc 66450021

                                                                            
Query: 426      ttccgctgtgagctgtgtgacgtggagctggctgacctgggctttgtgaagaatgcaggc 485
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66450020 ttccgctgtgagctgtgtgacgtggagctggctgacctgggctttgtgaagaatgcaggc 66449961

                   
Query: 486      agg 488
                |||
Sbjct: 66449960 agg 66449958



 Score =  188 bits (95), Expect = 7e-45
 Identities = 95/95 (100%)
 Strand = Plus / Minus

                                                                            
Query: 787      agcattttgtctgtgccaagtgtgagaagccattcctggggcaccgacactacgagaaga 846
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66437772 agcattttgtctgtgccaagtgtgagaagccattcctggggcaccgacactacgagaaga 66437713

                                                   
Query: 847      aaggcctggcctactgtgagacccactacaaccag 881
                |||||||||||||||||||||||||||||||||||
Sbjct: 66437712 aaggcctggcctactgtgagacccactacaaccag 66437678



 Score =  155 bits (78), Expect = 1e-34
 Identities = 78/78 (100%)
 Strand = Plus / Minus

                                                                            
Query: 930      gtggtatcagccctcaacaaggcctggtgtgtgaactgcttctcctgttccacctgcaac 989
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66436894 gtggtatcagccctcaacaaggcctggtgtgtgaactgcttctcctgttccacctgcaac 66436835

                                  
Query: 990      agccggctcaccctgaag 1007
                ||||||||||||||||||
Sbjct: 66436834 agccggctcaccctgaag 66436817



 Score =  141 bits (71), Expect = 2e-30
 Identities = 71/71 (100%)
 Strand = Plus / Minus

                                                                            
Query: 298      agttcgaaggtcggaagtactgcgaacatgacttccagatgctgtttgctccgtgctgtg 357
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66450363 agttcgaaggtcggaagtactgcgaacatgacttccagatgctgtttgctccgtgctgtg 66450304

                           
Query: 358      ggtcatgcggt 368
                |||||||||||
Sbjct: 66450303 ggtcatgcggt 66450293



 Score =  111 bits (56), Expect = 1e-21
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1        cttttttgggcgtctcctctctctgtgcgcggacctgctggcgggcgctcggcttt 56
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66415725 cttttttgggcgtctcctctctctgtgcgcggacctgctggcgggcgctcggcttt 66415780



 Score =  109 bits (55), Expect = 5e-21
 Identities = 55/55 (100%)
 Strand = Plus / Plus

                                                                       
Query: 85       tcagggggtcccgacgcggccccggttcagcgcgcgcagccaccatgacgggaag 139
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66415809 tcagggggtcccgacgcggccccggttcagcgcgcgcagccaccatgacgggaag 66415863



 Score =  103 bits (52), Expect = 3e-19
 Identities = 52/52 (100%)
 Strand = Plus / Minus

                                                                    
Query: 879      cagctctttggggacgtctgctacaactgtagccacgtgatcgagggtgatg 930
                ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66437096 cagctctttggggacgtctgctacaactgtagccacgtgatcgagggtgatg 66437045


>Sscrofa_Chr03 
||          Length = 144787322

 Score =  127 bits (64), Expect = 2e-26
 Identities = 130/152 (85%)
 Strand = Plus / Plus

                                                                            
Query: 637      ggaaggagctgactgcagaagcccgggagctgaagggcgagctctactgcttgccgtgcc 696
                ||||||| ||||| || || ||||||||||||||||| ||||| |||||| ||||||| |
Sbjct: 49803759 ggaaggaactgacggcggacgcccgggagctgaagggggagctgtactgcctgccgtgtc 49803818

                                                                            
Query: 697      atgacaagatgggtgtgcctatctgtggggcctgccgccggcccatcgagggccgtgtgg 756
                | ||||| ||||| ||||| |||||||| ||||||||||||||||| || || || ||||
Sbjct: 49803819 acgacaaaatgggggtgcccatctgtggcgcctgccgccggcccattgaagggcgcgtgg 49803878

                                                
Query: 757      tcaacgcattagggaagcagtggcacgtggag 788
                | |||||  | || ||||||||||||||||||
Sbjct: 49803879 tgaacgccatgggcaagcagtggcacgtggag 49803910



 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 83/95 (87%)
 Strand = Plus / Plus

                                                                            
Query: 787      agcattttgtctgtgccaagtgtgagaagccattcctggggcaccgacactacgagaaga 846
                |||||||||| |||||||||||||| |||||||| || || || || |||||||||| ||
Sbjct: 49804321 agcattttgtgtgtgccaagtgtgaaaagccatttctcggacatcgccactacgagagga 49804380

                                                   
Query: 847      aaggcctggcctactgtgagacccactacaaccag 881
                | |||||||| |||||||| |||||||| ||||||
Sbjct: 49804381 agggcctggcgtactgtgaaacccactataaccag 49804415



 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 76/87 (87%)
 Strand = Plus / Plus

                                                                            
Query: 209      gatcgtcaacagcaacggagagctgtaccacgaacactgctttgtgtgtgcgcagtgctt 268
                ||||||||||||||| || |||||||||||||| || ||||||||||| || ||||||||
Sbjct: 49791581 gatcgtcaacagcaatggcgagctgtaccacgagcagtgctttgtgtgcgcccagtgctt 49791640

                                           
Query: 269      ccggcccttcccggaggggctcttcta 295
                || ||  ||||| ||||| ||||||||
Sbjct: 49791641 ccagcagttccccgagggcctcttcta 49791667



 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                            
Query: 1007     gaacaagtttgtggagttcgacatgaagcccgtgtgtaagaggtgctatgagaagttccc 1066
                |||||| ||||||||||| ||||||||||| || || |||| ||||||||||||||| ||
Sbjct: 49810263 gaacaaatttgtggagtttgacatgaagccagtctgcaagaagtgctatgagaagtttcc 49810322

                               
Query: 1067     gctggagctgaagaa 1081
                | |||||||||||||
Sbjct: 49810323 gttggagctgaagaa 49810337



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 55/61 (90%)
 Strand = Plus / Plus

                                                                            
Query: 930      gtggtatcagccctcaacaaggcctggtgtgtgaactgcttctcctgttccacctgcaac 989
                ||||| || |||||||||||||||||||| |||| ||||||| |||| ||||||||||||
Sbjct: 49807111 gtggtctctgccctcaacaaggcctggtgcgtgagctgcttcgcctgctccacctgcaac 49807170

                 
Query: 990      a 990
                |
Sbjct: 49807171 a 49807171



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                            
Query: 366      ggtgaattcatcattggccgtgttatcaaggccatgaacaacaactggcaccctgggtgc 425
                ||||| |||||||| |||||||| ||||| ||||||||||||| |||||| || | ||||
Sbjct: 49800961 ggtgagttcatcatcggccgtgtcatcaaagccatgaacaacagctggcatcccgagtgc 49801020

                        
Query: 426      ttccgctg 433
                ||||||||
Sbjct: 49801021 ttccgctg 49801028



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                            
Query: 565      tcatcgatgagcagcccctcatgttcaggaatgacgcctaccacccggatcacttcaact 624
                |||| ||||||||||| || || |||| ||| ||| ||||||||||||| ||||||||||
Sbjct: 49801559 tcattgatgagcagcctctgatattcaagaacgacccctaccacccggaccacttcaact 49801618

                              
Query: 625      gcacccactgcggg 638
                || || ||||||||
Sbjct: 49801619 gcgccaactgcggg 49801632


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 42,803,085
Number of extensions: 245
Number of successful extensions: 245
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 244
Number of HSP's successfully gapped: 19
Length of query: 1783
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1761
Effective length of database: 2,808,408,574
Effective search space: 4945607498814
Effective search space used: 4945607498814
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)