Animal-Genome cDNA 20110601C-003078


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003078
         (1471 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_848667.1| carbonic anhydrase 2 [Bos taurus].                   445   e-125
Alignment   gi|XP_002692875.1| PREDICTED: carbonic anhydrase XIII [Bos taur...   330   2e-90
Alignment   gi|NP_001179451.1| carbonic anhydrase 7 [Bos taurus].                325   6e-89
Alignment   gi|XP_002694851.1| PREDICTED: carbonic anhydrase VII-like [Bos ...   325   6e-89
Alignment   gi|NP_001068934.1| carbonic anhydrase 1 [Bos taurus].                315   7e-86
Alignment   gi|NP_001029609.1| carbonic anhydrase 3 [Bos taurus].                314   1e-85
Alignment   gi|XP_002692874.1| PREDICTED: carbonic anhydrase 1-like [Bos ta...   313   2e-85
Alignment   gi|XP_001250684.1| PREDICTED: carbonic anhydrase 1-like [Bos ta...   313   2e-85
Alignment   gi|NP_001074377.2| carbonic anhydrase 5B, mitochondrial [Bos ta...   281   1e-75
Alignment   gi|NP_001179338.1| carbonic anhydrase 5A, mitochondrial [Bos ta...   250   3e-66

>ref|NP_848667.1| carbonic anhydrase 2 [Bos taurus].
          Length = 260

 Score =  445 bits (1144), Expect = e-125
 Identities = 205/256 (80%), Positives = 225/256 (87%)
 Frame = +2

Query: 230 MSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIV 409
           MSHHWGY KHNGPEHWHKDFPIA G+RQSPVDI+T   V DPALKPL+L Y +ATS+R+V
Sbjct: 1   MSHHWGYGKHNGPEHWHKDFPIANGERQSPVDIDTKAVVQDPALKPLALVYGEATSRRMV 60

Query: 410 NNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL 589
           NNGHSFNVE+D SQDK VL+ GPL GTYRL+QFHFHWGSSD QGSEHTVD+KKYAAELHL
Sbjct: 61  NNGHSFNVEYDDSQDKAVLKDGPLTGTYRLVQFHFHWGSSDDQGSEHTVDRKKYAAELHL 120

Query: 590 VHWNTKYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
           VHWNTKY DFG AAQQPDGLAV+GVFLK+G+A P LQK++D LDSIKTKGKS +F  FDP
Sbjct: 121 VHWNTKYGDFGTAAQQPDGLAVVGVFLKVGDANPALQKVLDALDSIKTKGKSTDFPNFDP 180

Query: 770 RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
             LLP  LDYWTYPGSLTTPPLLESVTWIVL+EPISVSS QM+KFRTLNFN EGEPE  M
Sbjct: 181 GSLLPNVLDYWTYPGSLTTPPLLESVTWIVLKEPISVSSQQMLKFRTLNFNAEGEPELLM 240

Query: 950 VDNWRPTQPLKNRQIR 997
           + NWRP QPLKNRQ+R
Sbjct: 241 LANWRPAQPLKNRQVR 256


>ref|XP_002692875.1| PREDICTED: carbonic anhydrase XIII [Bos taurus].
          Length = 262

 Score =  330 bits (846), Expect = 2e-90
 Identities = 154/257 (59%), Positives = 195/257 (75%), Gaps = 1/257 (0%)
 Frame = +2

Query: 242  WGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVNNGH 421
            WGY + +GP HW++ FPIA GD+QSP++I T    +D +L+PL + Y+ ++++ I N+GH
Sbjct: 6    WGYGERDGPVHWNEFFPIADGDQQSPIEIKTKEVRYDSSLRPLGIKYDASSAKIISNSGH 65

Query: 422  SFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLVHWN 601
            SFNV+FD + DK VL GGPL G+YRL QFH HWGS+D  GSEH VD  +YAAELH+VHWN
Sbjct: 66   SFNVDFDDTDDKSVLRGGPLTGSYRLRQFHLHWGSTDDHGSEHVVDGVRYAAELHVVHWN 125

Query: 602  T-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDPRDL 778
            + KY  F EAA +PDGLAVLG+FL+IG   P LQKI D+LDSIK KGK   FT FDP  L
Sbjct: 126  SDKYPSFVEAAHEPDGLAVLGIFLQIGEHNPQLQKITDILDSIKEKGKQTRFTNFDPVCL 185

Query: 779  LPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPMVDN 958
            LP   DYWTYPGSLT PPLLESVTWI+L++PI++SS Q+  FRTL  ++EGE    ++ N
Sbjct: 186  LPPCRDYWTYPGSLTVPPLLESVTWIILKQPINISSQQLAAFRTLLCSREGETAAFLLSN 245

Query: 959  WRPTQPLKNRQIRASFQ 1009
             RP QPLK R++RASF+
Sbjct: 246  HRPPQPLKGRKVRASFR 262


>ref|NP_001179451.1| carbonic anhydrase 7 [Bos taurus].
          Length = 264

 Score =  325 bits (833), Expect = 6e-89
 Identities = 153/262 (58%), Positives = 190/262 (72%), Gaps = 1/262 (0%)
 Frame = +2

Query: 227  TMSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRI 406
            T  H WGY +++GP HWHK +PIA+GDRQSP++I +S AV+ P+LKPL + YE  TS  I
Sbjct: 2    TGHHGWGYGQNDGPSHWHKLYPIAQGDRQSPINIVSSQAVYSPSLKPLEISYESCTSLSI 61

Query: 407  VNNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELH 586
             NNGHS  V+F+ S D+ V+ GGPL G YRL QFHFHWG   G GSEHTVD K + +ELH
Sbjct: 62   ANNGHSVQVDFNDSDDRTVVSGGPLDGPYRLKQFHFHWGKKHGVGSEHTVDGKSFPSELH 121

Query: 587  LVHWNT-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGF 763
            LVHWN  KY  FGEAA  PDGLAV+GVFL+ G+  P + ++ D L  ++ KG   +F+ F
Sbjct: 122  LVHWNAKKYSTFGEAASAPDGLAVVGVFLETGDEHPSMNRLTDALYMVRFKGTKAQFSCF 181

Query: 764  DPRDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEH 943
            +P+ LLP S  YWTYPGSLTTPPL ESVTWIVLREPI +S  QM KFR+L F  E +   
Sbjct: 182  NPKCLLPASRHYWTYPGSLTTPPLSESVTWIVLREPIRISERQMEKFRSLLFTSEEDERI 241

Query: 944  PMVDNWRPTQPLKNRQIRASFQ 1009
             MV+N+RP QPLK R ++ASF+
Sbjct: 242  HMVNNFRPPQPLKGRVVKASFR 263


>ref|XP_002694851.1| PREDICTED: carbonic anhydrase VII-like [Bos taurus].
          Length = 264

 Score =  325 bits (833), Expect = 6e-89
 Identities = 153/262 (58%), Positives = 190/262 (72%), Gaps = 1/262 (0%)
 Frame = +2

Query: 227  TMSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRI 406
            T  H WGY +++GP HWHK +PIA+GDRQSP++I +S AV+ P+LKPL + YE  TS  I
Sbjct: 2    TGHHGWGYGQNDGPSHWHKLYPIAQGDRQSPINIVSSQAVYSPSLKPLEISYESCTSLSI 61

Query: 407  VNNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELH 586
             NNGHS  V+F+ S D+ V+ GGPL G YRL QFHFHWG   G GSEHTVD K + +ELH
Sbjct: 62   ANNGHSVQVDFNDSDDRTVVSGGPLDGPYRLKQFHFHWGKKHGVGSEHTVDGKSFPSELH 121

Query: 587  LVHWNT-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGF 763
            LVHWN  KY  FGEAA  PDGLAV+GVFL+ G+  P + ++ D L  ++ KG   +F+ F
Sbjct: 122  LVHWNAKKYSTFGEAASAPDGLAVVGVFLETGDEHPSMNRLTDALYMVRFKGTKAQFSCF 181

Query: 764  DPRDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEH 943
            +P+ LLP S  YWTYPGSLTTPPL ESVTWIVLREPI +S  QM KFR+L F  E +   
Sbjct: 182  NPKCLLPASRHYWTYPGSLTTPPLSESVTWIVLREPIRISERQMEKFRSLLFTSEEDERI 241

Query: 944  PMVDNWRPTQPLKNRQIRASFQ 1009
             MV+N+RP QPLK R ++ASF+
Sbjct: 242  HMVNNFRPPQPLKGRVVKASFR 263


>ref|NP_001068934.1| carbonic anhydrase 1 [Bos taurus].
          Length = 261

 Score =  315 bits (807), Expect = 7e-86
 Identities = 151/259 (58%), Positives = 187/259 (72%), Gaps = 1/259 (0%)
 Frame = +2

Query: 233  SHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVN 412
            S  WGYD  NGPEHW K +PIA G+ QSP+DI TS    DP+LKPLS+ Y  AT++ IVN
Sbjct: 3    SPDWGYDGENGPEHWGKLYPIANGNNQSPIDIKTSETKRDPSLKPLSVSYNPATAKEIVN 62

Query: 413  NGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLV 592
             GHSF+V F+ S ++ VL+GGPL+ +YRL QFHFHWG +D  GSEH VD  K++AELHLV
Sbjct: 63   VGHSFHVNFEDSDNRSVLKGGPLSESYRLRQFHFHWGITDDCGSEHLVDGAKFSAELHLV 122

Query: 593  HWNT-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            HWN+ KY  F +AA Q DGLA++GV +K+G A P LQK++D L ++K K K   FT FDP
Sbjct: 123  HWNSAKYPSFADAASQADGLALIGVLVKVGQANPNLQKVLDALKAVKNKNKKAPFTNFDP 182

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
              LLP SLDYW Y GSLT PPL ESVTWI+ +E ISVSS Q+ +FR+L  N EG+ E  +
Sbjct: 183  SVLLPPSLDYWAYSGSLTHPPLHESVTWIIFKETISVSSEQLAQFRSLLANAEGDREVHI 242

Query: 950  VDNWRPTQPLKNRQIRASF 1006
              N RP QPL  R ++ASF
Sbjct: 243  KQNNRPPQPLNGRTVKASF 261


>ref|NP_001029609.1| carbonic anhydrase 3 [Bos taurus].
          Length = 260

 Score =  314 bits (804), Expect = 1e-85
 Identities = 142/260 (54%), Positives = 182/260 (70%)
 Frame = +2

Query: 230  MSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIV 409
            M+  WGY  HNGP+HWH+ FP AKG+ QSP+++NT    HDP+LKP +  Y+  +++ I+
Sbjct: 1    MAKEWGYADHNGPDHWHELFPNAKGENQSPIELNTKEISHDPSLKPWTASYDPGSAKTIL 60

Query: 410  NNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL 589
            NNG +  V FD + D+ +L GGPLA  YRL QFH HWGSSD  GSEH+VD  KYAAELHL
Sbjct: 61   NNGKTCRVVFDDTYDRSMLRGGPLAAPYRLRQFHLHWGSSDDHGSEHSVDGVKYAAELHL 120

Query: 590  VHWNTKYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            VHWN+KY  +  A +  DG+AV+GVFLKIG  +   Q ++D LD IKTKGK   F  F+P
Sbjct: 121  VHWNSKYNSYATALKHADGIAVVGVFLKIGREKGEFQLLLDALDKIKTKGKEAPFNNFNP 180

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
              L P   DYWTY GS TTPP  E + W++L+EPI+VSS Q+ K RTL  + E EP  P+
Sbjct: 181  SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQIAKLRTLYSSAENEPPVPL 240

Query: 950  VDNWRPTQPLKNRQIRASFQ 1009
            V NWRP QP+K R ++ASF+
Sbjct: 241  VRNWRPPQPIKGRIVKASFK 260


>ref|XP_002692874.1| PREDICTED: carbonic anhydrase 1-like [Bos taurus].
          Length = 261

 Score =  313 bits (803), Expect = 2e-85
 Identities = 150/259 (57%), Positives = 186/259 (71%), Gaps = 1/259 (0%)
 Frame = +2

Query: 233  SHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVN 412
            S  WGYD  NGPEHW K +PIA G+ QSP+DI TS    DP+LKPLS+ Y  AT++ IVN
Sbjct: 3    SPDWGYDGENGPEHWGKLYPIANGNNQSPIDIKTSETKRDPSLKPLSVSYNPATAKEIVN 62

Query: 413  NGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLV 592
             GHSF+V F+ S ++ VL+GGPL+ +YRL QFHFHWG +D  GSEH VD  K++AELHLV
Sbjct: 63   VGHSFHVNFEDSDNRSVLKGGPLSESYRLRQFHFHWGITDDCGSEHLVDGAKFSAELHLV 122

Query: 593  HWNT-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            HWN+ KY  F +AA + DGLA++GV +K+G A P LQK++D L ++K K K   FT FDP
Sbjct: 123  HWNSAKYPSFADAASKADGLALIGVLVKVGQANPNLQKVLDALKAVKNKNKKAPFTNFDP 182

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
              LLP SLDYW Y GSLT PPL ESVTWI+ +E IS SS Q+ +FR L  N EG+ E  +
Sbjct: 183  SVLLPPSLDYWAYSGSLTHPPLHESVTWIIFKETISASSEQLAQFRCLLANAEGDGELCI 242

Query: 950  VDNWRPTQPLKNRQIRASF 1006
              N RP QPLK R ++ASF
Sbjct: 243  KQNHRPPQPLKGRTVKASF 261


>ref|XP_001250684.1| PREDICTED: carbonic anhydrase 1-like [Bos taurus].
          Length = 261

 Score =  313 bits (803), Expect = 2e-85
 Identities = 150/259 (57%), Positives = 186/259 (71%), Gaps = 1/259 (0%)
 Frame = +2

Query: 233  SHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVN 412
            S  WGYD  NGPEHW K +PIA G+ QSP+DI TS    DP+LKPLS+ Y  AT++ IVN
Sbjct: 3    SPDWGYDGENGPEHWGKLYPIANGNNQSPIDIKTSETKRDPSLKPLSVSYNPATAKEIVN 62

Query: 413  NGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLV 592
             GHSF+V F+ S ++ VL+GGPL+ +YRL QFHFHWG +D  GSEH VD  K++AELHLV
Sbjct: 63   VGHSFHVNFEDSDNRSVLKGGPLSESYRLRQFHFHWGITDDCGSEHLVDGAKFSAELHLV 122

Query: 593  HWNT-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            HWN+ KY  F +AA + DGLA++GV +K+G A P LQK++D L ++K K K   FT FDP
Sbjct: 123  HWNSAKYPSFADAASKADGLALIGVLVKVGQANPNLQKVLDALKAVKNKNKKAPFTNFDP 182

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
              LLP SLDYW Y GSLT PPL ESVTWI+ +E IS SS Q+ +FR L  N EG+ E  +
Sbjct: 183  SVLLPPSLDYWAYSGSLTHPPLHESVTWIIFKETISASSEQLAQFRCLLANAEGDGELCI 242

Query: 950  VDNWRPTQPLKNRQIRASF 1006
              N RP QPLK R ++ASF
Sbjct: 243  KQNHRPPQPLKGRTVKASF 261


>ref|NP_001074377.2| carbonic anhydrase 5B, mitochondrial [Bos taurus].
          Length = 317

 Score =  281 bits (719), Expect = 1e-75
 Identities = 138/248 (55%), Positives = 172/248 (69%), Gaps = 1/248 (0%)
 Frame = +2

Query: 275  WHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVNNGHSFNVEFDSSQD 454
            W K      G+RQSP++I    +V+DP L+PL++ Y+  T   + NNG+SF VEF+ S D
Sbjct: 52   WEKVDLAPAGERQSPINIRWKDSVYDPGLQPLTISYDPTTCLHVWNNGYSFLVEFEDSAD 111

Query: 455  KGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLVHWNT-KYKDFGEAA 631
            K V+EGGPL   YRL QFHFHWG+ D  GSEHTVD K Y AELHLVHWN  K++ F +AA
Sbjct: 112  KSVIEGGPLEHNYRLKQFHFHWGAIDAWGSEHTVDSKCYPAELHLVHWNAVKFEHFEDAA 171

Query: 632  QQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDPRDLLPGSLDYWTYP 811
             + +GLAV+GVFLK+G     LQK+V++L SIK K    EF  FDP  L+P   DYWTY 
Sbjct: 172  LEENGLAVIGVFLKLGKHHKELQKLVNILPSIKHKDTLAEFGSFDPSCLMPTCPDYWTYS 231

Query: 812  GSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPMVDNWRPTQPLKNRQ 991
            GSLTTPPL ESVTWI+ ++P+ V   Q+ +FRTL F  EGE E  MVDN+RP QPL NR 
Sbjct: 232  GSLTTPPLSESVTWIIKKQPVEVDHDQLEQFRTLLFTSEGEKEKRMVDNFRPLQPLMNRT 291

Query: 992  IRASFQ*D 1015
            +R+SF  D
Sbjct: 292  VRSSFHHD 299


>ref|NP_001179338.1| carbonic anhydrase 5A, mitochondrial [Bos taurus].
          Length = 310

 Score =  250 bits (638), Expect = 3e-66
 Identities = 125/246 (50%), Positives = 159/246 (64%), Gaps = 1/246 (0%)
 Frame = +2

Query: 275  WHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVNNGHSFNVEFDSSQD 454
            W     +  G RQSP++I    +V+DP L+PL + Y       + N G+ F VEFD S +
Sbjct: 57   WKGPASVPGGTRQSPINIRWRDSVYDPQLQPLGVSYNAEACLYVWNTGYLFQVEFDDSTE 116

Query: 455  KGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLVHWNT-KYKDFGEAA 631
               + GGPL   YRL QFHFHWG+ +  GSEHTVD + Y AELHLVHWN  KY+++ +A 
Sbjct: 117  GSGISGGPLENHYRLKQFHFHWGAVNEWGSEHTVDDRVYPAELHLVHWNAVKYQNYTDAV 176

Query: 632  QQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDPRDLLPGSLDYWTYP 811
               DGLAV+GVFLK+G     LQ++V VL  IK K        F P  LLP   DYWTYP
Sbjct: 177  TGADGLAVVGVFLKLGARHEELQELVAVLPDIKHKDARAALGPFQPSCLLPACQDYWTYP 236

Query: 812  GSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPMVDNWRPTQPLKNRQ 991
            GSLTTPPL ESVTWI+ ++PI V+  Q+  FR+L F+  GE E  MV+N+RP QPL NR+
Sbjct: 237  GSLTTPPLSESVTWIIHKKPIEVAQDQLAAFRSLLFSVPGEEEKTMVNNYRPLQPLMNRK 296

Query: 992  IRASFQ 1009
            +R+SFQ
Sbjct: 297  VRSSFQ 302


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 52,994,951
Number of extensions: 1405799
Number of successful extensions: 4394
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 4317
Number of HSP's successfully gapped: 27
Length of query: 490
Length of database: 17,681,374
Length adjustment: 106
Effective length of query: 384
Effective length of database: 14,174,046
Effective search space: 5442833664
Effective search space used: 5442833664
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003078
         (1471 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001138642.1| carbonic anhydrase 2 [Canis lupus familiaris].    467   e-131
Alignment   gi|XP_544159.1| PREDICTED: similar to Carbonic anhydrase XIII (...   324   2e-88
Alignment   gi|NP_001138644.1| carbonic anhydrase 3 [Canis lupus familiaris].    324   2e-88
Alignment   gi|NP_001138643.1| carbonic anhydrase 1 [Canis lupus familiaris].    310   2e-84
Alignment   gi|XP_546892.2| PREDICTED: similar to Carbonic anhydrase VII (C...   305   7e-83
Alignment   gi|XP_543579.2| PREDICTED: similar to carbonic anhydrase VB, mi...   284   1e-76
Alignment   gi|XP_851479.1| PREDICTED: similar to carbonic anhydrase VA, mi...   257   2e-68
Alignment   gi|XP_861083.1| PREDICTED: similar to Carbonic anhydrase II (Ca...   246   3e-65
Alignment   gi|XP_544094.2| PREDICTED: similar to carbonic anhydrase VIII [...   196   4e-50
Alignment   gi|XP_540298.2| PREDICTED: similar to carbonic anhydrase XIV pr...   163   3e-40

>ref|NP_001138642.1| carbonic anhydrase 2 [Canis lupus familiaris].
          Length = 260

 Score =  467 bits (1202), Expect = e-131
 Identities = 217/260 (83%), Positives = 233/260 (89%)
 Frame = +2

Query: 230  MSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIV 409
            M+HHWGY KHNGPEHWHKDFPIAKG+RQSPVDI+T  AVHDPALK L  CY+QA SQRI+
Sbjct: 1    MAHHWGYAKHNGPEHWHKDFPIAKGERQSPVDIDTKAAVHDPALKSLCPCYDQAVSQRII 60

Query: 410  NNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL 589
            NNGHSFNVEFD SQDK VL+GGPL GTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL
Sbjct: 61   NNGHSFNVEFDDSQDKTVLKGGPLTGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL 120

Query: 590  VHWNTKYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            VHWNTKY +FG+A QQPDGLAVLG+FLKIG A PGLQKI+D LDSIKTKGKS +FT FDP
Sbjct: 121  VHWNTKYGEFGKAVQQPDGLAVLGIFLKIGGANPGLQKILDALDSIKTKGKSADFTNFDP 180

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
            R LLP SLDYWTYPGSLTTPPLLE VTWIVL+EPISVSS QM+KFR LNFNKEGEPE  M
Sbjct: 181  RGLLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQMLKFRKLNFNKEGEPEELM 240

Query: 950  VDNWRPTQPLKNRQIRASFQ 1009
            +DNWRP QPL +RQI ASF+
Sbjct: 241  MDNWRPAQPLHSRQINASFK 260


>ref|XP_544159.1| PREDICTED: similar to Carbonic anhydrase XIII (Carbonate dehydratase
            XIII) (CA-XIII) [Canis familiaris].
          Length = 279

 Score =  324 bits (830), Expect = 2e-88
 Identities = 155/256 (60%), Positives = 192/256 (75%), Gaps = 1/256 (0%)
 Frame = +2

Query: 242  WGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVNNGH 421
            W  ++ +GP HW+K FPIA GD+QSP++I T    +D +L+PLS+ Y+  +++ I N+GH
Sbjct: 23   WTKNQKSGPIHWNKFFPIADGDQQSPIEIKTKEVKYDSSLRPLSIKYDANSAKIISNSGH 82

Query: 422  SFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLVHWN 601
            SF+V+FD ++DK VL GGPL G+YRL QFH HWGS+D  GSEH VD  +YAAELH+VHWN
Sbjct: 83   SFSVDFDDTEDKSVLRGGPLTGSYRLRQFHLHWGSADDHGSEHVVDGVRYAAELHVVHWN 142

Query: 602  T-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDPRDL 778
            + KY  F EAA +PDGLAVLGVFL+IG     LQKI D+LDSIK KGK   FT FDP  L
Sbjct: 143  SDKYPSFVEAAHEPDGLAVLGVFLQIGEHNSQLQKITDILDSIKEKGKQTRFTNFDPLSL 202

Query: 779  LPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPMVDN 958
            LP S DYWTYPGSLT PPLLESVTWIVL++PI++SS Q+  FRTL    EGE    ++ N
Sbjct: 203  LPPSWDYWTYPGSLTVPPLLESVTWIVLKQPINISSQQLATFRTLLCTAEGEAAAFLLSN 262

Query: 959  WRPTQPLKNRQIRASF 1006
             RP QPLK R++RASF
Sbjct: 263  HRPPQPLKGRKVRASF 278


>ref|NP_001138644.1| carbonic anhydrase 3 [Canis lupus familiaris].
          Length = 260

 Score =  324 bits (830), Expect = 2e-88
 Identities = 146/260 (56%), Positives = 184/260 (70%)
 Frame = +2

Query: 230  MSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIV 409
            M+  WGY  HNGP+HWH+ +PIAKGD QSP++++T    HDP+L P S  Y+  + + I+
Sbjct: 1    MAKEWGYASHNGPDHWHELYPIAKGDNQSPIELHTKDIRHDPSLLPWSASYDPGSCKTIL 60

Query: 410  NNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL 589
            NNG +  V FD + D+ +L GGPL G YRL QFH HWG+SD  GSEHTVD  KYAAELHL
Sbjct: 61   NNGKTCRVVFDDTYDRSMLRGGPLTGPYRLRQFHLHWGASDDHGSEHTVDGVKYAAELHL 120

Query: 590  VHWNTKYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            VHWN KY  +GEA +QPDG+AV+G+FLKIG  +   Q  +D LD +KTKGK   FT FDP
Sbjct: 121  VHWNPKYNTYGEALKQPDGIAVVGIFLKIGREKGEFQLFLDALDKVKTKGKEAPFTKFDP 180

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
              L P   DYWTY GS TTPP  E + WI+L+EP++VSS QM K R+L  + E EP  P+
Sbjct: 181  SCLFPACRDYWTYHGSFTTPPCEECIVWILLKEPMTVSSDQMAKLRSLFSSAENEPPVPL 240

Query: 950  VDNWRPTQPLKNRQIRASFQ 1009
            V NWRP QP+K R ++ASF+
Sbjct: 241  VGNWRPPQPIKGRVVKASFK 260


>ref|NP_001138643.1| carbonic anhydrase 1 [Canis lupus familiaris].
          Length = 261

 Score =  310 bits (795), Expect = 2e-84
 Identities = 144/259 (55%), Positives = 186/259 (71%), Gaps = 1/259 (0%)
 Frame = +2

Query: 233  SHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVN 412
            S +WGYD  NGPE W K +PIA G+ QSP+DI TS   HD +LKP+S+ Y  AT++ I+N
Sbjct: 3    SSNWGYDDKNGPEQWGKLYPIANGNNQSPIDIKTSETKHDTSLKPISVSYNPATAKEIIN 62

Query: 413  NGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLV 592
             GHSF+V ++   D+ VL+GGPL+ +YRL QFHFHWGS++  GSEHTVD  KY+ ELH+V
Sbjct: 63   VGHSFHVNYEDHDDRSVLKGGPLSASYRLSQFHFHWGSTNDYGSEHTVDGVKYSGELHIV 122

Query: 593  HWN-TKYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            HWN +KY  F EA  Q DGLA++ V +KI  A P LQK++D L+++KTK K   FT FDP
Sbjct: 123  HWNSSKYSSFAEAVSQADGLAIIAVLMKIDQANPKLQKVLDALNAVKTKNKRAPFTNFDP 182

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
              LLP SLDYWTY GSLT PPL ESV+WI+ ++ I +S  Q+ +FR+L  N EG+   P+
Sbjct: 183  SILLPSSLDYWTYNGSLTHPPLYESVSWIICKDSIGISPEQLAQFRSLLSNVEGDQAVPI 242

Query: 950  VDNWRPTQPLKNRQIRASF 1006
              N RP QPLK R ++ASF
Sbjct: 243  QHNNRPPQPLKGRIVKASF 261


>ref|XP_546892.2| PREDICTED: similar to Carbonic anhydrase VII (Carbonate dehydratase
            VII) (CA-VII) [Canis familiaris].
          Length = 278

 Score =  305 bits (781), Expect = 7e-83
 Identities = 149/276 (53%), Positives = 186/276 (67%), Gaps = 15/276 (5%)
 Frame = +2

Query: 227  TMSHHWGYDKHN--------------GPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALK 364
            T  H WGY +++              GP  WHK +PIA+GDRQSP++I +S AV+ P+LK
Sbjct: 2    TGHHCWGYGQNDEIQASLSPSLSTPAGPSQWHKLYPIAQGDRQSPINIVSSQAVYSPSLK 61

Query: 365  PLSLCYEQATSQRIVNNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGS 544
            PL L YE   S  I NNGHS  V+F+ S D+  + GGPL G YRL Q HFHWG     GS
Sbjct: 62   PLELSYEACISLSITNNGHSVQVDFNDSDDRTAVTGGPLDGPYRLKQLHFHWGKKHSVGS 121

Query: 545  EHTVDKKKYAAELHLVHWNTK-YKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLD 721
            EHTVD K + +ELHLVHWN K Y  FGEAA  PDGLAV+G+FL+ G+  P + ++ D L 
Sbjct: 122  EHTVDGKSFPSELHLVHWNAKKYSTFGEAASAPDGLAVVGIFLETGDEHPSMNRLTDALY 181

Query: 722  SIKTKGKSVEFTGFDPRDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMK 901
             ++ KG   +F+ F+P+ LLP S  YWTYPGSLTTPPL ESVTWIVLREPIS+S  QM K
Sbjct: 182  MVRFKGTKAQFSCFNPKCLLPASRHYWTYPGSLTTPPLSESVTWIVLREPISISERQMEK 241

Query: 902  FRTLNFNKEGEPEHPMVDNWRPTQPLKNRQIRASFQ 1009
            FR+L F  E +    MV+N+RP QPLK R ++ASF+
Sbjct: 242  FRSLLFTSEEDERIHMVNNFRPPQPLKGRVVKASFR 277


>ref|XP_543579.2| PREDICTED: similar to carbonic anhydrase VB, mitochondrial precursor
            [Canis familiaris].
          Length = 317

 Score =  284 bits (727), Expect = 1e-76
 Identities = 140/248 (56%), Positives = 173/248 (69%), Gaps = 1/248 (0%)
 Frame = +2

Query: 275  WHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVNNGHSFNVEFDSSQD 454
            W     +  G+RQSP++I    +V DPALKPL++ Y+  T   + NNG+SF VEF+ S D
Sbjct: 52   WESVDLVPVGERQSPINIRWRDSVFDPALKPLTISYDPTTCLHVWNNGYSFLVEFEDSTD 111

Query: 455  KGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLVHWNT-KYKDFGEAA 631
            K V++GGPL   YRL QFHFHWG+ D  GSEHTVD K Y AELHLVHWN  K+++F +AA
Sbjct: 112  KSVIKGGPLEDNYRLKQFHFHWGAIDAWGSEHTVDSKCYPAELHLVHWNAVKFENFEDAA 171

Query: 632  QQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDPRDLLPGSLDYWTYP 811
             +  GLAV+GVFLK+G     LQK+VD L SIK K   VEF  FDP  L+P   DYWTY 
Sbjct: 172  LEEHGLAVIGVFLKLGKHHQELQKLVDTLPSIKHKDTLVEFGSFDPSCLMPACPDYWTYS 231

Query: 812  GSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPMVDNWRPTQPLKNRQ 991
            GSLTTPPL ESVTWI+ ++P+ V   Q+ +FRTL F  EGE E  MVDN+RP QPL NR 
Sbjct: 232  GSLTTPPLSESVTWIIKKQPVEVDHDQLEQFRTLLFTSEGEKEKRMVDNFRPLQPLMNRT 291

Query: 992  IRASFQ*D 1015
            +R+SF+ D
Sbjct: 292  VRSSFRHD 299


>ref|XP_851479.1| PREDICTED: similar to carbonic anhydrase VA, mitochondrial precursor
            [Canis familiaris].
          Length = 295

 Score =  257 bits (656), Expect = 2e-68
 Identities = 128/246 (52%), Positives = 163/246 (66%), Gaps = 1/246 (0%)
 Frame = +2

Query: 275  WHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVNNGHSFNVEFDSSQD 454
            W     +  G RQSP++I    +V+DP LK L + Y   +   + N G+ F VEFD S +
Sbjct: 38   WKGLASVPGGTRQSPINIRWRDSVYDPRLKSLQVSYAATSCLHVWNTGYFFQVEFDDSTE 97

Query: 455  KGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLVHWNT-KYKDFGEAA 631
               + GGPL   YRL QFHFHWG+++  GSEHTVD + Y AELHLVHWN+ KY+++ EA 
Sbjct: 98   GSGISGGPLENHYRLKQFHFHWGAANAWGSEHTVDDRAYPAELHLVHWNSVKYQNYKEAI 157

Query: 632  QQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDPRDLLPGSLDYWTYP 811
               +G+AV+GVFL++G    GLQK+V+VL  IK KG       F P  LLP   DYWTYP
Sbjct: 158  MGENGVAVIGVFLQLGAHHEGLQKLVEVLPEIKHKGARATMGPFQPSCLLPTCRDYWTYP 217

Query: 812  GSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPMVDNWRPTQPLKNRQ 991
            GSLTTPPL ESVTWI+ ++PI V+  Q+  FRTL F+  GE E  MV+N RP QPL NR+
Sbjct: 218  GSLTTPPLTESVTWIIQKQPIEVAPNQLAAFRTLLFSALGEEEQMMVNNNRPVQPLMNRE 277

Query: 992  IRASFQ 1009
            IR+SFQ
Sbjct: 278  IRSSFQ 283


>ref|XP_861083.1| PREDICTED: similar to Carbonic anhydrase II (Carbonate dehydratase
            II) (CA-II) (Carbonic anhydrase C) isoform 2 [Canis
            familiaris].
          Length = 150

 Score =  246 bits (629), Expect = 3e-65
 Identities = 116/144 (80%), Positives = 127/144 (88%)
 Frame = +2

Query: 578  ELHLVHWNTKYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFT 757
            +LHLVHWNTKY +FG+A QQPDGLAVLG+FLKIG A PGLQKI+D LDSIKTKGKS +FT
Sbjct: 7    QLHLVHWNTKYGEFGKAVQQPDGLAVLGIFLKIGGANPGLQKILDALDSIKTKGKSADFT 66

Query: 758  GFDPRDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEP 937
             FDPR LLP SLDYWTYPGSLTTPPLLE VTWIVL+EPISVSS QM+KFR LNFNKEGEP
Sbjct: 67   NFDPRGLLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQMLKFRKLNFNKEGEP 126

Query: 938  EHPMVDNWRPTQPLKNRQIRASFQ 1009
            E  M+DNWRP QPL +RQI ASF+
Sbjct: 127  EELMMDNWRPAQPLHSRQINASFK 150


>ref|XP_544094.2| PREDICTED: similar to carbonic anhydrase VIII [Canis familiaris].
          Length = 290

 Score =  196 bits (499), Expect = 4e-50
 Identities = 111/268 (41%), Positives = 158/268 (58%), Gaps = 12/268 (4%)
 Frame = +2

Query: 242  WGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLC--YEQATSQRIVNN 415
            WGY++  G E W   FP A G+ QSP+++N+  A +DP+L  + L   Y       + N+
Sbjct: 29   WGYEE--GVE-WGLVFPDANGEYQSPINLNSREARYDPSLLDVRLSPNYVVCRDCEVTND 85

Query: 416  GHSFNVEFDSSQDKGVLEGGPL--AGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL 589
            GH+  V   S   K VL GGPL     + L +  FHWG  + +GSEHTV+ K +  ELHL
Sbjct: 86   GHTIQVILKS---KSVLSGGPLPQGHEFELYEVRFHWGRENQRGSEHTVNFKAFPMELHL 142

Query: 590  VHWN-TKYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFD 766
            +HWN T +    EA  +P G+A++ +F++IG    GL+ + ++L  I+ KGKS     F+
Sbjct: 143  IHWNSTLFGSIDEAVGKPHGIAIIALFVQIGKEHVGLKAVTEILQDIQYKGKSKTIPCFN 202

Query: 767  PRDLLPGSL--DYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEP- 937
            P  LLP  L  DYW Y GSLT PP  E VTWI+ R P+++S  Q+ +FR L  + +G   
Sbjct: 203  PNTLLPDPLLRDYWVYEGSLTIPPCSEGVTWILFRYPLTISQLQIEEFRRLRTHVKGAEL 262

Query: 938  ----EHPMVDNWRPTQPLKNRQIRASFQ 1009
                +  + DN+RPTQPL +R IRA+FQ
Sbjct: 263  VEGCDGILGDNFRPTQPLSDRVIRAAFQ 290


>ref|XP_540298.2| PREDICTED: similar to carbonic anhydrase XIV precursor [Canis
            familiaris].
          Length = 337

 Score =  163 bits (413), Expect = 3e-40
 Identities = 98/263 (37%), Positives = 143/263 (54%), Gaps = 7/263 (2%)
 Frame = +2

Query: 239  HWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLC-YEQATSQRIV-- 409
            HW Y   +G +HW    P    + QSP+DI T +   DP L  L L  Y+Q  ++ +   
Sbjct: 22   HWTYVGPHGQDHWPASHPECGSNAQSPIDIQTDSVTFDPELPALQLQGYDQPGTEPLDLH 81

Query: 410  NNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDG-QGSEHTVDKKKYAAELH 586
            NNGH+  +    +     LEG P    Y   Q H HWG +   +GSEH ++ +  AAELH
Sbjct: 82   NNGHTVQLSLPPTM---YLEGLPRK--YVAAQLHLHWGETGSLRGSEHQINGEATAAELH 136

Query: 587  LVHWNT-KYKDFGEAAQQPDGLAVLGVFLKIGNAQ-PGLQKIVDVLDSIKTKGKSVEFTG 760
            +VH+++  Y   GEAA +P GLAVLG+ +++G A+ P  + I+  L  I+ K +      
Sbjct: 137  IVHYDSDSYDSLGEAAPKPQGLAVLGILIEVGEAKNPVYEHILSHLHEIRHKDQKTSVPP 196

Query: 761  FDPRDLLPGSLD-YWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEP 937
            F+  +LLP  L+ ++ Y GSLTTPP  +SV W V      +S GQ+ + +   F+ E EP
Sbjct: 197  FNVGELLPPQLNQFFRYNGSLTTPPCYQSVLWTVFNRRAQISMGQLEELQETLFSTEEEP 256

Query: 938  EHPMVDNWRPTQPLKNRQIRASF 1006
               +V N+R  QPL  R + ASF
Sbjct: 257  SKLLVRNYRAPQPLNQRTVFASF 279


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 55,267,920
Number of extensions: 1448392
Number of successful extensions: 4540
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 4489
Number of HSP's successfully gapped: 22
Length of query: 490
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 383
Effective length of database: 15,307,552
Effective search space: 5862792416
Effective search space used: 5862792416
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003078
         (1471 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_000058.1| carbonic anhydrase 2 [Homo sapiens].                 468   e-132
Alignment   gi|NP_001158302.1| carbonic anhydrase 1 [Homo sapiens].              328   8e-90
Alignment   gi|NP_001122303.1| carbonic anhydrase 1 [Homo sapiens].              328   8e-90
Alignment   gi|NP_001122302.1| carbonic anhydrase 1 [Homo sapiens].              328   8e-90
Alignment   gi|NP_001122301.1| carbonic anhydrase 1 [Homo sapiens].              328   8e-90
Alignment   gi|NP_001729.1| carbonic anhydrase 1 [Homo sapiens].                 328   8e-90
Alignment   gi|NP_940986.1| carbonic anhydrase 13 [Homo sapiens].                327   2e-89
Alignment   gi|NP_005172.1| carbonic anhydrase 3 [Homo sapiens].                 321   1e-87
Alignment   gi|NP_005173.1| carbonic anhydrase 7 isoform 1 [Homo sapiens].       318   8e-87
Alignment   gi|NP_009151.1| carbonic anhydrase 5B, mitochondrial precursor ...   284   2e-76

>ref|NP_000058.1| carbonic anhydrase 2 [Homo sapiens].
          Length = 260

 Score =  468 bits (1205), Expect = e-132
 Identities = 217/260 (83%), Positives = 238/260 (91%)
 Frame = +2

Query: 230  MSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIV 409
            MSHHWGY KHNGPEHWHKDFPIAKG+RQSPVDI+T TA +DP+LKPLS+ Y+QATS RI+
Sbjct: 1    MSHHWGYGKHNGPEHWHKDFPIAKGERQSPVDIDTHTAKYDPSLKPLSVSYDQATSLRIL 60

Query: 410  NNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL 589
            NNGH+FNVEFD SQDK VL+GGPL GTYRLIQFHFHWGS DGQGSEHTVDKKKYAAELHL
Sbjct: 61   NNGHAFNVEFDDSQDKAVLKGGPLDGTYRLIQFHFHWGSLDGQGSEHTVDKKKYAAELHL 120

Query: 590  VHWNTKYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            VHWNTKY DFG+A QQPDGLAVLG+FLK+G+A+PGLQK+VDVLDSIKTKGKS +FT FDP
Sbjct: 121  VHWNTKYGDFGKAVQQPDGLAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSADFTNFDP 180

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
            R LLP SLDYWTYPGSLTTPPLLE VTWIVL+EPISVSS Q++KFR LNFN EGEPE  M
Sbjct: 181  RGLLPESLDYWTYPGSLTTPPLLECVTWIVLKEPISVSSEQVLKFRKLNFNGEGEPEELM 240

Query: 950  VDNWRPTQPLKNRQIRASFQ 1009
            VDNWRP QPLKNRQI+ASF+
Sbjct: 241  VDNWRPAQPLKNRQIKASFK 260


>ref|NP_001158302.1| carbonic anhydrase 1 [Homo sapiens].
          Length = 261

 Score =  328 bits (841), Expect = 8e-90
 Identities = 155/259 (59%), Positives = 191/259 (73%), Gaps = 1/259 (0%)
 Frame = +2

Query: 233  SHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVN 412
            S  WGYD  NGPE W K +PIA G+ QSPVDI TS   HD +LKP+S+ Y  AT++ I+N
Sbjct: 3    SPDWGYDDKNGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPISVSYNPATAKEIIN 62

Query: 413  NGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLV 592
             GHSF+V F+ + ++ VL+GGP + +YRL QFHFHWGS++  GSEHTVD  KY+AELH+ 
Sbjct: 63   VGHSFHVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNEHGSEHTVDGVKYSAELHVA 122

Query: 593  HWNT-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            HWN+ KY    EAA + DGLAV+GV +K+G A P LQK++D L +IKTKGK   FT FDP
Sbjct: 123  HWNSAKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTNFDP 182

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
              LLP SLD+WTYPGSLT PPL ESVTWI+ +E ISVSS Q+ +FR+L  N EG+   PM
Sbjct: 183  STLLPSSLDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVPM 242

Query: 950  VDNWRPTQPLKNRQIRASF 1006
              N RPTQPLK R +RASF
Sbjct: 243  QHNNRPTQPLKGRTVRASF 261


>ref|NP_001122303.1| carbonic anhydrase 1 [Homo sapiens].
          Length = 261

 Score =  328 bits (841), Expect = 8e-90
 Identities = 155/259 (59%), Positives = 191/259 (73%), Gaps = 1/259 (0%)
 Frame = +2

Query: 233  SHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVN 412
            S  WGYD  NGPE W K +PIA G+ QSPVDI TS   HD +LKP+S+ Y  AT++ I+N
Sbjct: 3    SPDWGYDDKNGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPISVSYNPATAKEIIN 62

Query: 413  NGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLV 592
             GHSF+V F+ + ++ VL+GGP + +YRL QFHFHWGS++  GSEHTVD  KY+AELH+ 
Sbjct: 63   VGHSFHVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNEHGSEHTVDGVKYSAELHVA 122

Query: 593  HWNT-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            HWN+ KY    EAA + DGLAV+GV +K+G A P LQK++D L +IKTKGK   FT FDP
Sbjct: 123  HWNSAKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTNFDP 182

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
              LLP SLD+WTYPGSLT PPL ESVTWI+ +E ISVSS Q+ +FR+L  N EG+   PM
Sbjct: 183  STLLPSSLDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVPM 242

Query: 950  VDNWRPTQPLKNRQIRASF 1006
              N RPTQPLK R +RASF
Sbjct: 243  QHNNRPTQPLKGRTVRASF 261


>ref|NP_001122302.1| carbonic anhydrase 1 [Homo sapiens].
          Length = 261

 Score =  328 bits (841), Expect = 8e-90
 Identities = 155/259 (59%), Positives = 191/259 (73%), Gaps = 1/259 (0%)
 Frame = +2

Query: 233  SHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVN 412
            S  WGYD  NGPE W K +PIA G+ QSPVDI TS   HD +LKP+S+ Y  AT++ I+N
Sbjct: 3    SPDWGYDDKNGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPISVSYNPATAKEIIN 62

Query: 413  NGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLV 592
             GHSF+V F+ + ++ VL+GGP + +YRL QFHFHWGS++  GSEHTVD  KY+AELH+ 
Sbjct: 63   VGHSFHVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNEHGSEHTVDGVKYSAELHVA 122

Query: 593  HWNT-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            HWN+ KY    EAA + DGLAV+GV +K+G A P LQK++D L +IKTKGK   FT FDP
Sbjct: 123  HWNSAKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTNFDP 182

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
              LLP SLD+WTYPGSLT PPL ESVTWI+ +E ISVSS Q+ +FR+L  N EG+   PM
Sbjct: 183  STLLPSSLDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVPM 242

Query: 950  VDNWRPTQPLKNRQIRASF 1006
              N RPTQPLK R +RASF
Sbjct: 243  QHNNRPTQPLKGRTVRASF 261


>ref|NP_001122301.1| carbonic anhydrase 1 [Homo sapiens].
          Length = 261

 Score =  328 bits (841), Expect = 8e-90
 Identities = 155/259 (59%), Positives = 191/259 (73%), Gaps = 1/259 (0%)
 Frame = +2

Query: 233  SHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVN 412
            S  WGYD  NGPE W K +PIA G+ QSPVDI TS   HD +LKP+S+ Y  AT++ I+N
Sbjct: 3    SPDWGYDDKNGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPISVSYNPATAKEIIN 62

Query: 413  NGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLV 592
             GHSF+V F+ + ++ VL+GGP + +YRL QFHFHWGS++  GSEHTVD  KY+AELH+ 
Sbjct: 63   VGHSFHVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNEHGSEHTVDGVKYSAELHVA 122

Query: 593  HWNT-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            HWN+ KY    EAA + DGLAV+GV +K+G A P LQK++D L +IKTKGK   FT FDP
Sbjct: 123  HWNSAKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTNFDP 182

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
              LLP SLD+WTYPGSLT PPL ESVTWI+ +E ISVSS Q+ +FR+L  N EG+   PM
Sbjct: 183  STLLPSSLDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVPM 242

Query: 950  VDNWRPTQPLKNRQIRASF 1006
              N RPTQPLK R +RASF
Sbjct: 243  QHNNRPTQPLKGRTVRASF 261


>ref|NP_001729.1| carbonic anhydrase 1 [Homo sapiens].
          Length = 261

 Score =  328 bits (841), Expect = 8e-90
 Identities = 155/259 (59%), Positives = 191/259 (73%), Gaps = 1/259 (0%)
 Frame = +2

Query: 233  SHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVN 412
            S  WGYD  NGPE W K +PIA G+ QSPVDI TS   HD +LKP+S+ Y  AT++ I+N
Sbjct: 3    SPDWGYDDKNGPEQWSKLYPIANGNNQSPVDIKTSETKHDTSLKPISVSYNPATAKEIIN 62

Query: 413  NGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLV 592
             GHSF+V F+ + ++ VL+GGP + +YRL QFHFHWGS++  GSEHTVD  KY+AELH+ 
Sbjct: 63   VGHSFHVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTNEHGSEHTVDGVKYSAELHVA 122

Query: 593  HWNT-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            HWN+ KY    EAA + DGLAV+GV +K+G A P LQK++D L +IKTKGK   FT FDP
Sbjct: 123  HWNSAKYSSLAEAASKADGLAVIGVLMKVGEANPKLQKVLDALQAIKTKGKRAPFTNFDP 182

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
              LLP SLD+WTYPGSLT PPL ESVTWI+ +E ISVSS Q+ +FR+L  N EG+   PM
Sbjct: 183  STLLPSSLDFWTYPGSLTHPPLYESVTWIICKESISVSSEQLAQFRSLLSNVEGDNAVPM 242

Query: 950  VDNWRPTQPLKNRQIRASF 1006
              N RPTQPLK R +RASF
Sbjct: 243  QHNNRPTQPLKGRTVRASF 261


>ref|NP_940986.1| carbonic anhydrase 13 [Homo sapiens].
          Length = 262

 Score =  327 bits (838), Expect = 2e-89
 Identities = 157/256 (61%), Positives = 191/256 (74%), Gaps = 1/256 (0%)
 Frame = +2

Query: 242  WGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVNNGH 421
            WGY +HNGP HW + FPIA GD+QSP++I T    +D +L+PLS+ Y+ ++++ I N+GH
Sbjct: 6    WGYREHNGPIHWKEFFPIADGDQQSPIEIKTKEVKYDSSLRPLSIKYDPSSAKIISNSGH 65

Query: 422  SFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLVHWN 601
            SFNV+FD +++K VL GGPL G+YRL Q H HWGS+D  GSEH VD   YAAELH+VHWN
Sbjct: 66   SFNVDFDDTENKSVLRGGPLTGSYRLRQVHLHWGSADDHGSEHIVDGVSYAAELHVVHWN 125

Query: 602  T-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDPRDL 778
            + KY  F EAA +PDGLAVLGVFL+IG     LQKI D LDSIK KGK   FT FD   L
Sbjct: 126  SDKYPSFVEAAHEPDGLAVLGVFLQIGEPNSQLQKITDTLDSIKEKGKQTRFTNFDLLSL 185

Query: 779  LPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPMVDN 958
            LP S DYWTYPGSLT PPLLESVTWIVL++PI++SS Q+ KFR+L    EGE    +V N
Sbjct: 186  LPPSWDYWTYPGSLTVPPLLESVTWIVLKQPINISSQQLAKFRSLLCTAEGEAAAFLVSN 245

Query: 959  WRPTQPLKNRQIRASF 1006
             RP QPLK R++RASF
Sbjct: 246  HRPPQPLKGRKVRASF 261


>ref|NP_005172.1| carbonic anhydrase 3 [Homo sapiens].
          Length = 260

 Score =  321 bits (822), Expect = 1e-87
 Identities = 147/260 (56%), Positives = 184/260 (70%)
 Frame = +2

Query: 230  MSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIV 409
            M+  WGY  HNGP+HWH+ FP AKG+ QSPV+++T    HDP+L+P S+ Y+  +++ I+
Sbjct: 1    MAKEWGYASHNGPDHWHELFPNAKGENQSPVELHTKDIRHDPSLQPWSVSYDGGSAKTIL 60

Query: 410  NNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL 589
            NNG +  V FD + D+ +L GGPL G YRL QFH HWGSSD  GSEHTVD  KYAAELHL
Sbjct: 61   NNGKTCRVVFDDTYDRSMLRGGPLPGPYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL 120

Query: 590  VHWNTKYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            VHWN KY  F EA +Q DG+AV+G+FLKIG+     Q  +D LD IKTKGK   FT FDP
Sbjct: 121  VHWNPKYNTFKEALKQRDGIAVIGIFLKIGHENGEFQIFLDALDKIKTKGKEAPFTKFDP 180

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
              L P   DYWTY GS TTPP  E + W++L+EP++VSS QM K R+L  + E EP  P+
Sbjct: 181  SCLFPACRDYWTYQGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLLSSAENEPPVPL 240

Query: 950  VDNWRPTQPLKNRQIRASFQ 1009
            V NWRP QP+ NR +RASF+
Sbjct: 241  VSNWRPPQPINNRVVRASFK 260


>ref|NP_005173.1| carbonic anhydrase 7 isoform 1 [Homo sapiens].
          Length = 264

 Score =  318 bits (815), Expect = 8e-87
 Identities = 151/262 (57%), Positives = 187/262 (71%), Gaps = 1/262 (0%)
 Frame = +2

Query: 227  TMSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRI 406
            T  H WGY + +GP HWHK +PIA+GDRQSP++I +S AV+ P+L+PL L YE   S  I
Sbjct: 2    TGHHGWGYGQDDGPSHWHKLYPIAQGDRQSPINIISSQAVYSPSLQPLELSYEACMSLSI 61

Query: 407  VNNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELH 586
             NNGHS  V+F+ S D+ V+ GGPL G YRL QFHFHWG     GSEHTVD K + +ELH
Sbjct: 62   TNNGHSVQVDFNDSDDRTVVTGGPLEGPYRLKQFHFHWGKKHDVGSEHTVDGKSFPSELH 121

Query: 587  LVHWNT-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGF 763
            LVHWN  KY  FGEAA  PDGLAV+GVFL+ G+  P + ++ D L  ++ KG   +F+ F
Sbjct: 122  LVHWNAKKYSTFGEAASAPDGLAVVGVFLETGDEHPSMNRLTDALYMVRFKGTKAQFSCF 181

Query: 764  DPRDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEH 943
            +P+ LLP S  YWTYPGSLTTPPL ESVTWIVLREPI +S  QM KFR+L F  E +   
Sbjct: 182  NPKCLLPASRHYWTYPGSLTTPPLSESVTWIVLREPICISERQMGKFRSLLFTSEDDERI 241

Query: 944  PMVDNWRPTQPLKNRQIRASFQ 1009
             MV+N+RP QPLK R ++ASF+
Sbjct: 242  HMVNNFRPPQPLKGRVVKASFR 263


>ref|NP_009151.1| carbonic anhydrase 5B, mitochondrial precursor [Homo sapiens].
          Length = 317

 Score =  284 bits (726), Expect = 2e-76
 Identities = 139/248 (56%), Positives = 175/248 (70%), Gaps = 1/248 (0%)
 Frame = +2

Query: 275  WHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVNNGHSFNVEFDSSQD 454
            W     +  GDRQSP++I    +V+DP LKPL++ Y+ AT   + NNG+SF VEF+ S D
Sbjct: 52   WESVDLVPGGDRQSPINIRWRDSVYDPGLKPLTISYDPATCLHVWNNGYSFLVEFEDSTD 111

Query: 455  KGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLVHWNT-KYKDFGEAA 631
            K V++GGPL   YRL QFHFHWG+ D  GSEHTVD K + AELHLVHWN  ++++F +AA
Sbjct: 112  KSVIKGGPLEHNYRLKQFHFHWGAIDAWGSEHTVDSKCFPAELHLVHWNAVRFENFEDAA 171

Query: 632  QQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDPRDLLPGSLDYWTYP 811
             + +GLAV+GVFLK+G     LQK+VD L SIK K   VEF  FDP  L+P   DYWTY 
Sbjct: 172  LEENGLAVIGVFLKLGKHHKELQKLVDTLPSIKHKDALVEFGSFDPSCLMPTCPDYWTYS 231

Query: 812  GSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPMVDNWRPTQPLKNRQ 991
            GSLTTPPL ESVTWI+ ++P+ V   Q+ +FRTL F  EGE E  MVDN+RP QPL NR 
Sbjct: 232  GSLTTPPLSESVTWIIKKQPVEVDHDQLEQFRTLLFTSEGEKEKRMVDNFRPLQPLMNRT 291

Query: 992  IRASFQ*D 1015
            +R+SF+ D
Sbjct: 292  VRSSFRHD 299


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 54,385,291
Number of extensions: 1432490
Number of successful extensions: 4484
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 4413
Number of HSP's successfully gapped: 27
Length of query: 490
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 383
Effective length of database: 14,770,016
Effective search space: 5656916128
Effective search space used: 5656916128
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003078
         (1471 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_033931.4| carbonic anhydrase 2 [Mus musculus].                 439   e-123
Alignment   gi|NP_078771.1| carbonic anhydrase 13 [Mus musculus].                337   1e-92
Alignment   gi|NP_031632.2| carbonic anhydrase 3 [Mus musculus].                 330   2e-90
Alignment   gi|NP_001077426.1| carbonic anhydrase 1 [Mus musculus].              321   1e-87
Alignment   gi|NP_033929.2| carbonic anhydrase 1 [Mus musculus].                 321   1e-87
Alignment   gi|NP_444300.1| carbonic anhydrase 7 [Mus musculus].                 313   2e-85
Alignment   gi|NP_851832.2| carbonic anhydrase 5B, mitochondrial precursor ...   289   4e-78
Alignment   gi|NP_031634.2| carbonic anhydrase 5A, mitochondrial precursor ...   263   3e-70
Alignment   gi|NP_031618.2| carbonic anhydrase-related protein [Mus musculu...   197   2e-50
Alignment   gi|NP_035927.1| carbonic anhydrase 14 precursor [Mus musculus].      175   7e-44

>ref|NP_033931.4| carbonic anhydrase 2 [Mus musculus].
          Length = 260

 Score =  439 bits (1129), Expect = e-123
 Identities = 203/260 (78%), Positives = 227/260 (87%)
 Frame = +2

Query: 230  MSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIV 409
            MSHHWGY KHNGPE+WHKDFPIA GDRQSPVDI+T+TA HDPAL+PL + Y++A S+ IV
Sbjct: 1    MSHHWGYSKHNGPENWHKDFPIANGDRQSPVDIDTATAQHDPALQPLLISYDKAASKSIV 60

Query: 410  NNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL 589
            NNGHSFNVEFD SQD  VL+GGPL+ +YRLIQFHFHWGSSDGQGSEHTV+KKKYAAELHL
Sbjct: 61   NNGHSFNVEFDDSQDNAVLKGGPLSDSYRLIQFHFHWGSSDGQGSEHTVNKKKYAAELHL 120

Query: 590  VHWNTKYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            VHWNTKY DFG+A QQPDGLAVLG+FLKIG A  GLQK+++ L SIKTKGK   F  FDP
Sbjct: 121  VHWNTKYGDFGKAVQQPDGLAVLGIFLKIGPASQGLQKVLEALHSIKTKGKRAAFANFDP 180

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
              LLPG+LDYWTYPGSLTTPPLLE VTWIVLREPI+VSS QM  FRTLNFN+EG+ E  M
Sbjct: 181  CSLLPGNLDYWTYPGSLTTPPLLECVTWIVLREPITVSSEQMSHFRTLNFNEEGDAEEAM 240

Query: 950  VDNWRPTQPLKNRQIRASFQ 1009
            VDNWRP QPLKNR+I+ASF+
Sbjct: 241  VDNWRPAQPLKNRKIKASFK 260


>ref|NP_078771.1| carbonic anhydrase 13 [Mus musculus].
          Length = 262

 Score =  337 bits (865), Expect = 1e-92
 Identities = 160/256 (62%), Positives = 195/256 (76%), Gaps = 1/256 (0%)
 Frame = +2

Query: 242  WGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVNNGH 421
            WGY +HNGP HW++ FPIA GD+QSP++I T    +D +L+PLS+ Y+ A+++ I N+GH
Sbjct: 6    WGYGEHNGPIHWNELFPIADGDQQSPIEIKTKEVKYDSSLRPLSIKYDPASAKIISNSGH 65

Query: 422  SFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLVHWN 601
            SFNV+FD ++DK VL GGPL G YRL QFH HWGS+D  GSEH VD  +YAAELH+VHWN
Sbjct: 66   SFNVDFDDTEDKSVLRGGPLTGNYRLRQFHLHWGSADDHGSEHVVDGVRYAAELHVVHWN 125

Query: 602  T-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDPRDL 778
            + KY  F EAA + DGLAVLGVFL+IG   P LQKI D+LDSIK KGK   FT FDP  L
Sbjct: 126  SDKYPSFVEAAHESDGLAVLGVFLQIGEHNPQLQKITDILDSIKEKGKQTRFTNFDPLCL 185

Query: 779  LPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPMVDN 958
            LP S DYWTYPGSLT PPLLESVTWIVL++PIS+SS Q+ +FR+L    EGE    ++ N
Sbjct: 186  LPSSWDYWTYPGSLTVPPLLESVTWIVLKQPISISSQQLARFRSLLCTAEGESAAFLLSN 245

Query: 959  WRPTQPLKNRQIRASF 1006
             RP QPLK R++RASF
Sbjct: 246  HRPPQPLKGRRVRASF 261


>ref|NP_031632.2| carbonic anhydrase 3 [Mus musculus].
          Length = 260

 Score =  330 bits (845), Expect = 2e-90
 Identities = 149/260 (57%), Positives = 188/260 (72%)
 Frame = +2

Query: 230  MSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIV 409
            M+  WGY  HNGP+HWH+ +PIAKGD QSP++++T    HDP+L+P S  Y+  +++ I+
Sbjct: 1    MAKEWGYASHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLQPWSASYDPGSAKTIL 60

Query: 410  NNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL 589
            NNG +  V FD + D+ +L GGPL+G YRL QFH HWGSSD  GSEHTVD  KYAAELHL
Sbjct: 61   NNGKTCRVVFDDTYDRSMLRGGPLSGPYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL 120

Query: 590  VHWNTKYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            VHWN KY  FGEA +QPDG+AV+G+FLKIG  +   Q ++D LD IKTKGK   FT FDP
Sbjct: 121  VHWNPKYNTFGEALKQPDGIAVVGIFLKIGREKGEFQILLDALDKIKTKGKEAPFTHFDP 180

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
              L P   DYWTY GS TTPP  E + W++L+EP++VSS QM K R+L  + E EP  P+
Sbjct: 181  SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLFSSAENEPPVPL 240

Query: 950  VDNWRPTQPLKNRQIRASFQ 1009
            V NWRP QP+K R +RASF+
Sbjct: 241  VGNWRPPQPVKGRVVRASFK 260


>ref|NP_001077426.1| carbonic anhydrase 1 [Mus musculus].
          Length = 261

 Score =  321 bits (822), Expect = 1e-87
 Identities = 152/259 (58%), Positives = 189/259 (72%), Gaps = 1/259 (0%)
 Frame = +2

Query: 233  SHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVN 412
            S  WGY   NGP+ W K +PIA G+ QSP+DI TS A HD +LKPLS+ Y  AT++ IVN
Sbjct: 3    SADWGYGSENGPDQWSKLYPIANGNNQSPIDIKTSEANHDSSLKPLSISYNPATAKEIVN 62

Query: 413  NGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLV 592
             GHSF+V FD S ++ VL+GGPLA +YRL QFHFHWG+S+  GSEHTVD  +Y+ ELHLV
Sbjct: 63   VGHSFHVIFDDSSNQSVLKGGPLADSYRLTQFHFHWGNSNDHGSEHTVDGTRYSGELHLV 122

Query: 593  HWNT-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            HWN+ KY    EA  + DGLA+LGV +K+G A P LQK++D L+S+KTKGK   FT FDP
Sbjct: 123  HWNSAKYSSASEAISKADGLAILGVLMKVGPANPSLQKVLDALNSVKTKGKRAPFTNFDP 182

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
              LLP SLDYWTY GSLT PPL ESVTW++ ++ IS+S  Q+ + R L  + EGEP  P+
Sbjct: 183  SSLLPSSLDYWTYFGSLTHPPLHESVTWVICKDSISLSPEQLAQLRGLLSSAEGEPAVPV 242

Query: 950  VDNWRPTQPLKNRQIRASF 1006
            + N RP QPLK R +RASF
Sbjct: 243  LSNHRPPQPLKGRTVRASF 261


>ref|NP_033929.2| carbonic anhydrase 1 [Mus musculus].
          Length = 261

 Score =  321 bits (822), Expect = 1e-87
 Identities = 152/259 (58%), Positives = 189/259 (72%), Gaps = 1/259 (0%)
 Frame = +2

Query: 233  SHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVN 412
            S  WGY   NGP+ W K +PIA G+ QSP+DI TS A HD +LKPLS+ Y  AT++ IVN
Sbjct: 3    SADWGYGSENGPDQWSKLYPIANGNNQSPIDIKTSEANHDSSLKPLSISYNPATAKEIVN 62

Query: 413  NGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLV 592
             GHSF+V FD S ++ VL+GGPLA +YRL QFHFHWG+S+  GSEHTVD  +Y+ ELHLV
Sbjct: 63   VGHSFHVIFDDSSNQSVLKGGPLADSYRLTQFHFHWGNSNDHGSEHTVDGTRYSGELHLV 122

Query: 593  HWNT-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            HWN+ KY    EA  + DGLA+LGV +K+G A P LQK++D L+S+KTKGK   FT FDP
Sbjct: 123  HWNSAKYSSASEAISKADGLAILGVLMKVGPANPSLQKVLDALNSVKTKGKRAPFTNFDP 182

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
              LLP SLDYWTY GSLT PPL ESVTW++ ++ IS+S  Q+ + R L  + EGEP  P+
Sbjct: 183  SSLLPSSLDYWTYFGSLTHPPLHESVTWVICKDSISLSPEQLAQLRGLLSSAEGEPAVPV 242

Query: 950  VDNWRPTQPLKNRQIRASF 1006
            + N RP QPLK R +RASF
Sbjct: 243  LSNHRPPQPLKGRTVRASF 261


>ref|NP_444300.1| carbonic anhydrase 7 [Mus musculus].
          Length = 264

 Score =  313 bits (802), Expect = 2e-85
 Identities = 150/262 (57%), Positives = 185/262 (70%), Gaps = 1/262 (0%)
 Frame = +2

Query: 227  TMSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRI 406
            T  H WGY + +GP +WHK +PIA+GDRQSP++I +S AV+ P+L+PL L YE   S  I
Sbjct: 2    TGHHCWGYGQDDGPSNWHKLYPIAQGDRQSPINIISSQAVYSPSLQPLELFYEACMSLSI 61

Query: 407  VNNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELH 586
             NNGHS  V+F+ S D+ V+ GGPL G YRL Q HFHWG     GSEHTVD K + +ELH
Sbjct: 62   TNNGHSVQVDFNDSDDRTVVSGGPLEGPYRLKQLHFHWGKKRDMGSEHTVDGKSFPSELH 121

Query: 587  LVHWNT-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGF 763
            LVHWN  KY  FGEAA  PDGLAV+GVFL+ G+  P + ++ D L  ++ K    +F+ F
Sbjct: 122  LVHWNAKKYSTFGEAAAAPDGLAVVGVFLETGDEHPSMNRLTDALYMVRFKDTKAQFSCF 181

Query: 764  DPRDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEH 943
            +P+ LLP S  YWTYPGSLTTPPL ESVTWIVLREPI +S  QM KFR+L F  E +   
Sbjct: 182  NPKCLLPTSRHYWTYPGSLTTPPLSESVTWIVLREPIRISERQMEKFRSLLFTSEDDERI 241

Query: 944  PMVDNWRPTQPLKNRQIRASFQ 1009
             MVDN+RP QPLK R ++ASFQ
Sbjct: 242  HMVDNFRPPQPLKGRVVKASFQ 263


>ref|NP_851832.2| carbonic anhydrase 5B, mitochondrial precursor [Mus musculus].
          Length = 317

 Score =  289 bits (739), Expect = 4e-78
 Identities = 144/251 (57%), Positives = 175/251 (69%), Gaps = 1/251 (0%)
 Frame = +2

Query: 266  PEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVNNGHSFNVEFDS 445
            P  W     +  GDRQSP++I    +V+DP LKPL++ Y+ AT   I NNG+SF VEF+ 
Sbjct: 49   PPLWENLDLVPAGDRQSPINIRWRDSVYDPGLKPLTISYDPATCLHIWNNGYSFLVEFED 108

Query: 446  SQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLVHWNT-KYKDFG 622
            S DK V+EGGPL   YRL QFHFHWG+ D  GSEHTVD K Y AELHLVHWN  K++ F 
Sbjct: 109  STDKSVVEGGPLEHNYRLKQFHFHWGAIDAWGSEHTVDSKCYPAELHLVHWNAVKFESFE 168

Query: 623  EAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDPRDLLPGSLDYW 802
            +AA + +GLAV+GVFLK+G     LQK+VD L SIK K   VEF  FDP  L+P   DYW
Sbjct: 169  DAALEENGLAVIGVFLKLGKHHKELQKLVDTLPSIKHKDTLVEFGSFDPSCLMPTCPDYW 228

Query: 803  TYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPMVDNWRPTQPLK 982
            TY GSLTTPPL ESVTWI+ ++P+ V   Q+ +FRTL F  EGE E  MVDN+RP QPL 
Sbjct: 229  TYSGSLTTPPLSESVTWIIKKQPVEVDRDQLEQFRTLLFTSEGEKEKRMVDNFRPLQPLM 288

Query: 983  NRQIRASFQ*D 1015
            NR +R+SF+ D
Sbjct: 289  NRTVRSSFRHD 299


>ref|NP_031634.2| carbonic anhydrase 5A, mitochondrial precursor [Mus musculus].
          Length = 299

 Score =  263 bits (672), Expect = 3e-70
 Identities = 134/272 (49%), Positives = 173/272 (63%), Gaps = 9/272 (3%)
 Frame = +2

Query: 227  TMSHHWGYDKHNGPEH--------WHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCY 382
            T    W +      EH        W      A+G RQSP++I    +V+DP L PL + Y
Sbjct: 22   TGPQRWRFQHSCAEEHSNCARHPLWTGPVSSAEGTRQSPINIQWKDSVYDPQLAPLRVSY 81

Query: 383  EQATSQRIVNNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDK 562
            + A+ + + N G+ F VEFD S +   + GGPL   YRL QFHFHWG++D  GSEH VD 
Sbjct: 82   DAASCRYLWNTGYFFQVEFDDSCEDSGISGGPLGNHYRLKQFHFHWGATDEWGSEHAVDG 141

Query: 563  KKYAAELHLVHWN-TKYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKG 739
              Y AELHLVHWN TKY+++ +A+   +GLAV+GVFLK+G     LQK+VDVL  ++ K 
Sbjct: 142  HTYPAELHLVHWNSTKYENYKKASVGENGLAVIGVFLKLGAHHQALQKLVDVLPEVRHKD 201

Query: 740  KSVEFTGFDPRDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNF 919
              V    FDP  LLP   DYWTYPGSLTTPPL ESVTWIV + P+ VS  Q+  FRTL F
Sbjct: 202  TQVAMGPFDPSCLLPACRDYWTYPGSLTTPPLAESVTWIVQKTPVEVSPSQLSTFRTLLF 261

Query: 920  NKEGEPEHPMVDNWRPTQPLKNRQIRASFQ*D 1015
            +  GE E  MV+N+RP QPL++R++R+SF+ D
Sbjct: 262  SGRGEEEDVMVNNYRPLQPLRDRKLRSSFRLD 293


>ref|NP_031618.2| carbonic anhydrase-related protein [Mus musculus].
          Length = 291

 Score =  197 bits (500), Expect = 2e-50
 Identities = 111/268 (41%), Positives = 158/268 (58%), Gaps = 12/268 (4%)
 Frame = +2

Query: 242  WGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLC--YEQATSQRIVNN 415
            WGY++  G E W   FP A G+ QSP+++N+  A +DP+L  + L   Y       + N+
Sbjct: 30   WGYEE--GVE-WGLVFPDANGEYQSPINLNSREARYDPSLLDVRLSPNYVVCRDCEVTND 86

Query: 416  GHSFNVEFDSSQDKGVLEGGPL--AGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL 589
            GH+  V   S   K VL GGPL     + L +  FHWG  + +GSEHTV+ K +  ELHL
Sbjct: 87   GHTIQVILKS---KSVLSGGPLPQGQEFELYEVRFHWGRENQRGSEHTVNFKAFPMELHL 143

Query: 590  VHWN-TKYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFD 766
            +HWN T +    EA  +P G+A++ +F++IG    GL+ + ++L  I+ KGKS     F+
Sbjct: 144  IHWNSTLFGSIDEAVGKPHGIAIIALFVQIGKEHVGLKAVTEILQDIQYKGKSKTIPCFN 203

Query: 767  PRDLLPGSL--DYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEP- 937
            P  LLP  L  DYW Y GSLT PP  E VTWI+ R P+++S  Q+ +FR L  + +G   
Sbjct: 204  PNTLLPDPLLRDYWVYEGSLTIPPCSEGVTWILFRYPLTISQMQIEEFRRLRTHVKGAEL 263

Query: 938  ----EHPMVDNWRPTQPLKNRQIRASFQ 1009
                +  + DN+RPTQPL +R IRA+FQ
Sbjct: 264  VEGCDGILGDNFRPTQPLSDRVIRAAFQ 291


>ref|NP_035927.1| carbonic anhydrase 14 precursor [Mus musculus].
          Length = 337

 Score =  175 bits (444), Expect = 7e-44
 Identities = 99/269 (36%), Positives = 145/269 (53%), Gaps = 7/269 (2%)
 Frame = +2

Query: 236  HHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLC-YEQATSQRIV- 409
            HHW Y+  +G +HW   +P   GD QSP++I T + + DP L  +    Y+Q  ++ +  
Sbjct: 20   HHWTYEGPHGQDHWPTSYPECGGDAQSPINIQTDSVIFDPDLPAVQPHGYDQLGTEPLDL 79

Query: 410  -NNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDG-QGSEHTVDKKKYAAEL 583
             NNGH+  +    +     L  G L   Y   Q H HWG     +GSEH ++ +  AAEL
Sbjct: 80   HNNGHTVQLSLPPT-----LHLGGLPRKYTAAQLHLHWGQRGSLEGSEHQINSEATAAEL 134

Query: 584  HLVHWNTK-YKDFGEAAQQPDGLAVLGVFLKIGNAQ-PGLQKIVDVLDSIKTKGKSVEFT 757
            H+VH++++ Y    EAAQ+P GLAVLG+ +++G  + P    I+  L  I+ K +     
Sbjct: 135  HVVHYDSQSYSSLSEAAQKPQGLAVLGILIEVGETENPAYDHILSRLHEIRYKDQKTSVP 194

Query: 758  GFDPRDLLPGSLD-YWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGE 934
             F  R+L P  L+ ++ Y GSLTTPP  +SV W V      +S GQ+ K +    + E +
Sbjct: 195  PFSVRELFPQQLEQFFRYNGSLTTPPCYQSVLWTVFNRRAQISMGQLEKLQETLSSTEED 254

Query: 935  PEHPMVDNWRPTQPLKNRQIRASFQ*DGP 1021
            P  P+V N+R  QPL  R I ASF   GP
Sbjct: 255  PSEPLVQNYRVPQPLNQRTIFASFIQAGP 283


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 46,308,034
Number of extensions: 1210450
Number of successful extensions: 3798
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 3752
Number of HSP's successfully gapped: 19
Length of query: 490
Length of database: 15,617,559
Length adjustment: 105
Effective length of query: 385
Effective length of database: 12,463,779
Effective search space: 4798554915
Effective search space used: 4798554915
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003078
         (1471 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_001927840.1| PREDICTED: carbonic anhydrase 2 [Sus scrofa].     550   e-157
Alignment   gi|XP_003355077.1| PREDICTED: carbonic anhydrase 3-like [Sus sc...   402   e-112
Alignment   gi|NP_001008688.1| carbonic anhydrase 3 [Sus scrofa].                318   4e-87
Alignment   gi|XP_001924218.1| PREDICTED: carbonic anhydrase 1 [Sus scrofa].     315   5e-86
Alignment   gi|XP_001924497.2| PREDICTED: carbonic anhydrase 13 [Sus scrofa].    302   4e-82
Alignment   gi|XP_001926850.1| PREDICTED: carbonic anhydrase 5B, mitochondr...   286   2e-77
Alignment   gi|XP_001924916.3| PREDICTED: carbonic anhydrase 14-like [Sus s...   166   3e-41
Alignment   gi|NP_001137588.1| carbonic anhydrase 6 [Sus scrofa].                163   2e-40
Alignment   gi|XP_003131649.2| PREDICTED: carbonic anhydrase-related protei...   148   7e-36
Alignment   gi|XP_001925555.2| PREDICTED: carbonic anhydrase 9 [Sus scrofa].     147   1e-35

>ref|XP_001927840.1| PREDICTED: carbonic anhydrase 2 [Sus scrofa].
          Length = 260

 Score =  550 bits (1417), Expect = e-157
 Identities = 260/260 (100%), Positives = 260/260 (100%)
 Frame = +2

Query: 230  MSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIV 409
            MSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIV
Sbjct: 1    MSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIV 60

Query: 410  NNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL 589
            NNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL
Sbjct: 61   NNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL 120

Query: 590  VHWNTKYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            VHWNTKYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP
Sbjct: 121  VHWNTKYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 180

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
            RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM
Sbjct: 181  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 240

Query: 950  VDNWRPTQPLKNRQIRASFQ 1009
            VDNWRPTQPLKNRQIRASFQ
Sbjct: 241  VDNWRPTQPLKNRQIRASFQ 260


>ref|XP_003355077.1| PREDICTED: carbonic anhydrase 3-like [Sus scrofa].
          Length = 260

 Score =  402 bits (1033), Expect = e-112
 Identities = 186/260 (71%), Positives = 207/260 (79%)
 Frame = +2

Query: 230  MSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIV 409
            MSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIV
Sbjct: 1    MSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIV 60

Query: 410  NNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL 589
            NNGHSFNVEFDSSQDKGVL GGPL   YRL QFH HWGSSD  GSEHTVD  KYAAELHL
Sbjct: 61   NNGHSFNVEFDSSQDKGVLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL 120

Query: 590  VHWNTKYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            VHWN+KY  F  A + PDG+AV+G+FLKIG  +   Q ++D LD IKTKGK   FT F+P
Sbjct: 121  VHWNSKYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNP 180

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
              L P   DYWTY GS TTPP  E + W++L+EPI+VSS QM K R+L  + E EP  P+
Sbjct: 181  SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPL 240

Query: 950  VDNWRPTQPLKNRQIRASFQ 1009
            V NWRP QP+K R ++ASF+
Sbjct: 241  VRNWRPPQPIKGRIVKASFK 260


>ref|NP_001008688.1| carbonic anhydrase 3 [Sus scrofa].
          Length = 260

 Score =  318 bits (816), Expect = 4e-87
 Identities = 143/260 (55%), Positives = 183/260 (70%)
 Frame = +2

Query: 230  MSHHWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIV 409
            M+  WGY  HNGP+HWH+ +PIAKGD QSP++++T    HDP+L P +  Y+  +++ I+
Sbjct: 1    MAKEWGYADHNGPDHWHELYPIAKGDNQSPIELHTKDIKHDPSLLPWTASYDPGSAKTIL 60

Query: 410  NNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL 589
            NNG +  V FD + D+ +L GGPL   YRL QFH HWGSSD  GSEHTVD  KYAAELHL
Sbjct: 61   NNGKTCRVVFDDTYDRSMLRGGPLTAAYRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHL 120

Query: 590  VHWNTKYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDP 769
            VHWN+KY  F  A + PDG+AV+G+FLKIG  +   Q ++D LD IKTKGK   FT F+P
Sbjct: 121  VHWNSKYNSFATALKHPDGVAVVGIFLKIGREKGEFQLVLDALDKIKTKGKEAPFTNFNP 180

Query: 770  RDLLPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPM 949
              L P   DYWTY GS TTPP  E + W++L+EPI+VSS QM K R+L  + E EP  P+
Sbjct: 181  SCLFPACRDYWTYHGSFTTPPCEECIVWLLLKEPITVSSDQMAKLRSLYSSAENEPPVPL 240

Query: 950  VDNWRPTQPLKNRQIRASFQ 1009
            V NWRP QP+K R ++ASF+
Sbjct: 241  VRNWRPPQPIKGRIVKASFK 260


>ref|XP_001924218.1| PREDICTED: carbonic anhydrase 1 [Sus scrofa].
          Length = 261

 Score =  315 bits (806), Expect = 5e-86
 Identities = 147/256 (57%), Positives = 186/256 (72%), Gaps = 1/256 (0%)
 Frame = +2

Query: 242  WGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVNNGH 421
            WGYD   GPEHW K +PIA G+ QSP+DI TS   HD +LKP+S+ Y  AT++ I+N GH
Sbjct: 6    WGYDGEYGPEHWSKVYPIANGNNQSPIDIKTSETKHDTSLKPISVSYNPATAKEIINVGH 65

Query: 422  SFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLVHWN 601
            SF+V F+ + ++ VL+ GPL+ +YRL+QFHFHWG +D  GSEH VD  KY+AELH+VHWN
Sbjct: 66   SFHVNFEDNDNRSVLKDGPLSESYRLLQFHFHWGKTDDYGSEHLVDGAKYSAELHIVHWN 125

Query: 602  T-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDPRDL 778
            + KY    EAA   DGLA++GV +K+G A P LQK++D L  IK KGK   FT FDP  L
Sbjct: 126  SAKYSSAAEAASHADGLAIIGVLVKVGQANPNLQKVLDALKGIKYKGKKAPFTNFDPSVL 185

Query: 779  LPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPMVDN 958
            LP SLDYWTY GSLT PPL ESV WI+L+E IS+SS Q+ +FR+L  N EG+ + P+  N
Sbjct: 186  LPSSLDYWTYFGSLTHPPLHESVNWIILKENISISSDQLAQFRSLLSNAEGDKDVPIKHN 245

Query: 959  WRPTQPLKNRQIRASF 1006
             RP QPLK R ++ASF
Sbjct: 246  NRPPQPLKGRIVKASF 261


>ref|XP_001924497.2| PREDICTED: carbonic anhydrase 13 [Sus scrofa].
          Length = 243

 Score =  302 bits (773), Expect = 4e-82
 Identities = 139/219 (63%), Positives = 172/219 (78%), Gaps = 1/219 (0%)
 Frame = +2

Query: 242 WGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVNNGH 421
           WGY +HNGP HW++ FPIA GD+QSP++I T    +D +L+PLS+ Y+ ++++ I N+GH
Sbjct: 6   WGYGEHNGPVHWNEFFPIADGDQQSPIEIKTKEVKYDSSLRPLSIKYDPSSAKIISNSGH 65

Query: 422 SFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLVHWN 601
           SF+V+FD ++DK VL GGPL G+YRL QFH HWGS+D  GSEH VD  KYAAELH+VHWN
Sbjct: 66  SFSVDFDDTEDKSVLRGGPLTGSYRLRQFHLHWGSADDHGSEHVVDGVKYAAELHVVHWN 125

Query: 602 T-KYKDFGEAAQQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDPRDL 778
           + KY  F EAA +PDGLAVLGVFL+IG     LQKI D+LDSIK KGK   FT FDP  L
Sbjct: 126 SDKYPSFVEAAHEPDGLAVLGVFLQIGEHNSQLQKITDILDSIKEKGKQTRFTNFDPLSL 185

Query: 779 LPGSLDYWTYPGSLTTPPLLESVTWIVLREPISVSSGQM 895
           LP S DYWTYPGSLT PPLLESVTWI+L++PI++SS Q+
Sbjct: 186 LPPSWDYWTYPGSLTVPPLLESVTWIILKQPINISSQQV 224


>ref|XP_001926850.1| PREDICTED: carbonic anhydrase 5B, mitochondrial-like [Sus scrofa].
          Length = 317

 Score =  286 bits (732), Expect = 2e-77
 Identities = 140/248 (56%), Positives = 175/248 (70%), Gaps = 1/248 (0%)
 Frame = +2

Query: 275  WHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQRIVNNGHSFNVEFDSSQD 454
            W     +  G+RQSP++I    +V+DP LKPL++ Y+  T   + NNG+SF VEF+ S D
Sbjct: 52   WESADLVPAGERQSPINIRWRDSVYDPGLKPLTISYDPTTCLHVWNNGYSFLVEFEDSTD 111

Query: 455  KGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLVHWNT-KYKDFGEAA 631
            K V+EGGPL   YRL QFHFHWG+ D  GSEHTVD K Y AELHLVHWN  K+++F +AA
Sbjct: 112  KSVIEGGPLEHNYRLKQFHFHWGAIDAWGSEHTVDSKCYPAELHLVHWNAVKFENFEDAA 171

Query: 632  QQPDGLAVLGVFLKIGNAQPGLQKIVDVLDSIKTKGKSVEFTGFDPRDLLPGSLDYWTYP 811
            Q+ +GLAV+GVFLK+G     +QK+VD L SIK K   VEF  FDP  L+P   DYWTY 
Sbjct: 172  QEENGLAVIGVFLKLGKHHKEVQKLVDTLPSIKHKDTLVEFGSFDPSCLMPTCPDYWTYS 231

Query: 812  GSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPMVDNWRPTQPLKNRQ 991
            GSLTTPPL ESVTWI+ ++PI V+  Q+ +FRTL F  +GE E  MVDN+RP QPL NR 
Sbjct: 232  GSLTTPPLSESVTWIIKKQPIEVAHDQLEQFRTLLFTSKGETEKRMVDNFRPLQPLMNRT 291

Query: 992  IRASFQ*D 1015
            +R+SF  D
Sbjct: 292  VRSSFHHD 299


>ref|XP_001924916.3| PREDICTED: carbonic anhydrase 14-like [Sus scrofa].
          Length = 340

 Score =  166 bits (420), Expect = 3e-41
 Identities = 101/264 (38%), Positives = 142/264 (53%), Gaps = 8/264 (3%)
 Frame = +2

Query: 239  HWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLC-YEQATSQRIV-- 409
            HW Y+  +G +HW   +P    + QSP++I T +   DP L PL    YEQ  ++ +   
Sbjct: 21   HWTYEGPHGQDHWPASYPECGSNAQSPINIQTDSVTFDPELLPLQPHGYEQPGTEPLDLH 80

Query: 410  NNGHSFNVEFDSSQDKGV-LEGGPLAGTYRLIQFHFHWGSSDGQG-SEHTVDKKKYAAEL 583
            NNGH+       S    + LEG P    Y   Q H HWG     G SEH ++ +  AAEL
Sbjct: 81   NNGHTGKNAXQLSLPPTLHLEGLPRK--YVAAQLHLHWGQKGSPGGSEHKINGEATAAEL 138

Query: 584  HLVHWNTK-YKDFGEAAQQPDGLAVLGVFLKIGNAQ-PGLQKIVDVLDSIKTKGKSVEFT 757
            H+VH++++ Y    EAAQQP GLAVLG+ +++G  + P  + I+  L  I+ K +     
Sbjct: 139  HIVHYDSESYASLSEAAQQPQGLAVLGILVEVGETENPAYEHILSHLHEIRHKDQRTSVP 198

Query: 758  GFDPRDLLPGSL-DYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGE 934
             F+ R LLP  L  ++ Y GSLTTPP  +SV W V      +S GQ+ K +   F+ E E
Sbjct: 199  PFNVRGLLPPLLAQFFRYNGSLTTPPCYQSVLWTVFNRRAQISMGQLEKLQEALFSTEEE 258

Query: 935  PEHPMVDNWRPTQPLKNRQIRASF 1006
            P   +V N+R  QPL  R + ASF
Sbjct: 259  PSQLLVQNYRAPQPLNQRIVLASF 282


>ref|NP_001137588.1| carbonic anhydrase 6 [Sus scrofa].
          Length = 317

 Score =  163 bits (413), Expect = 2e-40
 Identities = 93/264 (35%), Positives = 146/264 (55%), Gaps = 8/264 (3%)
 Frame = +2

Query: 242  WGY-DKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLC-YEQATSQ-RIVN 412
            W Y D      HW +++P   G RQSP+D+   +  ++PAL+ LSL  YE    +  ++N
Sbjct: 23   WTYSDGELDEAHWSREYPDCDGRRQSPIDVQRKSVQYNPALRALSLTGYEAQEGEFSMIN 82

Query: 413  NGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGS--SDGQGSEHTVDKKKYAAELH 586
            NGH+  +   S+      +G      Y   Q HFHWG   S+  GSEHT+D  +Y  E+H
Sbjct: 83   NGHTVQISLPSTMRLTAPDGTQ----YIAKQMHFHWGGAFSEISGSEHTIDGIRYVTEVH 138

Query: 587  LVHWNTKYKDFGEAAQQPDGLAVLGVFLKIGNAQPG--LQKIVDVLDSIKTKGKSVEFTG 760
            +VH+N+KYK + EA   PDGLAVL    +I +          +  L +I+  G++   + 
Sbjct: 139  VVHYNSKYKSYDEAQTAPDGLAVLAALFEIKDYAENTYYSDFISHLKNIRIPGQTTVLSS 198

Query: 761  FDPRDLLPGSL-DYWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEP 937
             + +D+LP +L  Y++Y GSLTTPP  E+V W VL + + +S  Q+ K +    N + + 
Sbjct: 199  LNLQDMLPENLHSYYSYQGSLTTPPCTENVHWFVLADTVKLSRTQVWKLQNSLLNDQNKT 258

Query: 938  EHPMVDNWRPTQPLKNRQIRASFQ 1009
             H   +++R TQPL +R + A+F+
Sbjct: 259  IH---NDYRRTQPLNHRVVEANFK 279


>ref|XP_003131649.2| PREDICTED: carbonic anhydrase-related protein 10-like [Sus scrofa].
          Length = 328

 Score =  148 bits (374), Expect = 7e-36
 Identities = 82/239 (34%), Positives = 136/239 (56%), Gaps = 5/239 (2%)
 Frame = +2

Query: 302  GDRQSPVDINTSTAVHDPALKPLSL-CYEQATSQRIVNNGHSFNVEFDSSQDKGVLEGGP 478
            G RQSPV+I TS  + DP L PL +    +  S  + N G   ++  D      +  GGP
Sbjct: 63   GKRQSPVNIETSHMIFDPFLTPLRINTGGRKVSGTMYNTGRHVSLRLDKEHLVNI-SGGP 121

Query: 479  LAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHLVHWNTK-YKDFGEAAQQPDGLAV 655
            +  ++RL +   H+GS D QGSEH ++ + ++ E+ L+H+N + Y +  EAA+ P+GL V
Sbjct: 122  MTYSHRLEEIRLHFGSEDSQGSEHLLNGQAFSGEVQLIHYNHELYTNVTEAAKSPNGLVV 181

Query: 656  LGVFLKIGNAQ-PGLQKIV--DVLDSIKTKGKSVEFTGFDPRDLLPGSLDYWTYPGSLTT 826
            + +F+K+ ++  P L +++  D +  I  K  +    G +  +L P +  + TY GS+T 
Sbjct: 182  VSIFIKVSDSSNPFLNRMLNRDTITRITYKNDAYLLQGLNIEELYPETSSFITYDGSMTI 241

Query: 827  PPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEHPMVDNWRPTQPLKNRQIRAS 1003
            PP  E+ +WI++ +P+ ++  QM   R L+ N+  +    M DN+RP QPL NR IR +
Sbjct: 242  PPCYETASWIIMNKPVYITRMQMHSLRLLSQNQPSQIFLSMSDNFRPVQPLNNRCIRTN 300


>ref|XP_001925555.2| PREDICTED: carbonic anhydrase 9 [Sus scrofa].
          Length = 442

 Score =  147 bits (372), Expect = 1e-35
 Identities = 96/261 (36%), Positives = 130/261 (49%), Gaps = 5/261 (1%)
 Frame = +2

Query: 239  HWGYDKHNGPEHWHKDFPIAKGDRQSPVDINTSTAVHDPALKPLSLCYEQATSQ---RIV 409
            HW Y    G   W +  P   G  QSPVDI        PAL+PL L   +   Q   R+ 
Sbjct: 121  HWRY---GGAPPWPQVSPACAGRFQSPVDIRPQLTAFCPALRPLELLGYELPPQPELRLR 177

Query: 410  NNGHSFNVEFDSSQDKGVLEGGPLAGTYRLIQFHFHWGSSDGQGSEHTVDKKKYAAELHL 589
            NNGH+  +      +   L  GP    YR +Q H HWGS+   GSEHTV   ++ AE+H+
Sbjct: 178  NNGHTVQLSLPPGLE---LSLGP-GQEYRALQLHLHWGSAGRPGSEHTVGGYRFPAEIHV 233

Query: 590  VHWNTKYKDFGEAAQQPDGLAVLGVFLKIG-NAQPGLQKIVDVLDSIKTKGKSVEFTGFD 766
            VH +T +    EA  +P GLAVL  FL+ G       ++++  L  I  +       G D
Sbjct: 234  VHLSTAFAKIDEALGRPRGLAVLAAFLQEGPEENSAYEQLLSHLGEIADEDSETWVPGLD 293

Query: 767  PRDLLPGSLD-YWTYPGSLTTPPLLESVTWIVLREPISVSSGQMMKFRTLNFNKEGEPEH 943
               LLP  L+ Y+ Y GSLTTPP  + V W V  E + +S+ Q+    TL+ +  G  + 
Sbjct: 294  VSALLPSDLNRYFRYEGSLTTPPCAQGVVWTVFNETVKLSAKQL---HTLSDSLWGPDDS 350

Query: 944  PMVDNWRPTQPLKNRQIRASF 1006
             +  N+R TQPL  R I ASF
Sbjct: 351  RLQLNFRATQPLNGRIIEASF 371


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 34,087,328
Number of extensions: 904274
Number of successful extensions: 2776
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 2738
Number of HSP's successfully gapped: 17
Length of query: 490
Length of database: 11,343,932
Length adjustment: 103
Effective length of query: 387
Effective length of database: 8,779,541
Effective search space: 3397682367
Effective search space used: 3397682367
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003078
         (1471 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr04                                                        1104   0.0  

>Sscrofa_Chr04 
||          Length = 143465943

 Score = 1104 bits (557), Expect = 0.0
 Identities = 575/581 (98%)
 Strand = Plus / Minus

                                                                            
Query: 891      agatgatgaaattccgcaccctgaacttcaacaaggagggtgaacctgaacacccgatgg 950
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56158407 agatgatgaaattccgcaccctgaacttcaacaaggagggtgaacctgaacacccgatgg 56158348

                                                                            
Query: 951      tggacaactggcgcccaactcagccactgaaaaatagacaaatcagagcttccttccaat 1010
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56158347 tggacaactggcgcccaactcagccactgaaaaatagacaaatcagagcttccttccaat 56158288

                                                                            
Query: 1011     aagatggtcctagagacagcgtccagcgaagaatctttggctttcccttagcacaaatcc 1070
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56158287 aagatggtcctagagacagcgtccagcgaagaatctttggctttcccttagcacaaatcc 56158228

                                                                            
Query: 1071     accttggtgaactggtctctggctgccatgcatctggttttctagatccttcatctctca 1130
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56158227 accttggtgaactggtctctggctgccatgcatctggttttctagatccttcatctctca 56158168

                                                                            
Query: 1131     cctgacatgcttactactgaaatgtgaaaacctagaccaattgttatgcttggcagaatt 1190
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56158167 cctgacatgcttactactgaaatgtgaaaacctagaccaattgttatgcttggcagaatt 56158108

                                                                            
Query: 1191     gctgtgatttgtgctttgcttatggtagtagcttttctctaatggagaatataatatatg 1250
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56158107 gctgtgatttgtgctttgcttatggtagtagcttttctctaatggagaatataatatatg 56158048

                                                                            
Query: 1251     gagtaggagagaagtaccttgatgttgttcatagcacgtgggataatgagcactcacaat 1310
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56158047 gagtaggagagaagtaccttgatgttgttcatagcacgtgggataatgagcactcacaat 56157988

                                                                            
Query: 1311     tgttcactgaaatgccatttttaaacagtgagaaagtaggatgagtacaaatctatatta 1370
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 56157987 tgttcactgaaatgccatttttaaacagtgagaaagtaggatgagtacaaatctatataa 56157928

                                                                            
Query: 1371     tgagataaactgagctgtggtatataaatcaggtaaagtcatcatgatcctatgtaatgt 1430
                |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 56157927 tgagataaactgagctgtgtaatataaatcaggtaaagtcatcatgatcctatgtaatgt 56157868

                                                         
Query: 1431     atatcagagaaaaataatgtttgtgattcccaaatgatata 1471
                |||||||||||||  ||||||||||||||||| ||||||||
Sbjct: 56157867 atatcagagaaaataaatgtttgtgattcccagatgatata 56157827



 Score =  394 bits (199), Expect = e-107
 Identities = 199/199 (100%)
 Strand = Plus / Minus

                                                                            
Query: 263      ggacctgagcactggcataaggacttccccatcgccaagggagatcgccagtcccctgtt 322
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56172961 ggacctgagcactggcataaggacttccccatcgccaagggagatcgccagtcccctgtt 56172902

                                                                            
Query: 323      gacatcaacaccagcacagctgttcacgaccctgccctgaagcctctgtccctttgctat 382
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56172901 gacatcaacaccagcacagctgttcacgaccctgccctgaagcctctgtccctttgctat 56172842

                                                                            
Query: 383      gagcaagcgacttctcagagaattgtcaacaacggccactctttcaacgtggagtttgat 442
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56172841 gagcaagcgacttctcagagaattgtcaacaacggccactctttcaacgtggagtttgat 56172782

                                   
Query: 443      agctcccaggacaaaggcg 461
                |||||||||||||||||||
Sbjct: 56172781 agctcccaggacaaaggcg 56172763



 Score =  317 bits (160), Expect = 1e-83
 Identities = 163/164 (99%)
 Strand = Plus / Minus

                                                                            
Query: 101      gagcacgaagttggcgggagcctataaataccagcgacggcgcgacccgcggagatacgg 160
                ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 56174231 gagcacgaagttggcgggagcctataaataccagcgacggcgcgacccgcggacatacgg 56174172

                                                                            
Query: 161      tgcaggcgctccagcagccgccgctagaccggcgccaactcctgccctgcccctaccagc 220
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56174171 tgcaggcgctccagcagccgccgctagaccggcgccaactcctgccctgcccctaccagc 56174112

                                                            
Query: 221      ggcacgaccatgtcccatcactggggatacgacaagcacaacgg 264
                ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56174111 ggcacgaccatgtcccatcactggggatacgacaagcacaacgg 56174068



 Score =  272 bits (137), Expect = 5e-70
 Identities = 151/158 (95%)
 Strand = Plus / Minus

                                                                            
Query: 735      agggtaagagtgtggaattcactggctttgaccctcgtgacctcctccccggaagcttgg 794
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56160398 agggtaagagtgtggaattcactggctttgaccctcgtgacctcctccccggaagcttgg 56160339

                                                                            
Query: 795      actactggacctacccagggtccctgaccannnnnnntctcctggaaagtgtgacgtgga 854
                ||||||||||||||||||||||||||||||       |||||||||||||||||||||||
Sbjct: 56160338 actactggacctacccagggtccctgaccaccccccctctcctggaaagtgtgacgtgga 56160279

                                                      
Query: 855      ttgtgctcagagaacccatctctgttagcagtgggcag 892
                ||||||||||||||||||||||||||||||||||||||
Sbjct: 56160278 ttgtgctcagagaacccatctctgttagcagtgggcag 56160241



 Score =  238 bits (120), Expect = 7e-60
 Identities = 120/120 (100%)
 Strand = Plus / Minus

                                                                            
Query: 461      gtgctggaaggtggacctcttgctggcacttacagattgattcagtttcactttcactgg 520
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56164891 gtgctggaaggtggacctcttgctggcacttacagattgattcagtttcactttcactgg 56164832

                                                                            
Query: 521      ggttcatctgatgggcaaggttctgagcatactgtggataaaaagaaatatgctgcagag 580
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56164831 ggttcatctgatgggcaaggttctgagcatactgtggataaaaagaaatatgctgcagag 56164772



 Score =  167 bits (84), Expect = 2e-38
 Identities = 84/84 (100%)
 Strand = Plus / Minus

                                                                            
Query: 579      agctacacttggttcattggaacaccaaatacaaggactttggagaagctgcacaacagc 638
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56164299 agctacacttggttcattggaacaccaaatacaaggactttggagaagctgcacaacagc 56164240

                                        
Query: 639      ctgatggactggctgttttgggtg 662
                ||||||||||||||||||||||||
Sbjct: 56164239 ctgatggactggctgttttgggtg 56164216



 Score =  131 bits (66), Expect = 1e-27
 Identities = 66/66 (100%)
 Strand = Plus / Minus

                                                                            
Query: 672      agattggcaatgctcagccaggcctccagaaaatcgttgatgttctggattccattaaaa 731
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56162594 agattggcaatgctcagccaggcctccagaaaatcgttgatgttctggattccattaaaa 56162535

                      
Query: 732      caaagg 737
                ||||||
Sbjct: 56162534 caaagg 56162529


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 42,186,695
Number of extensions: 217
Number of successful extensions: 217
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 216
Number of HSP's successfully gapped: 7
Length of query: 1471
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1450
Effective length of database: 2,808,413,156
Effective search space: 4072199076200
Effective search space used: 4072199076200
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)