Animal-Genome cDNA 20110601C-003094


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003094
         (1612 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_777050.1| thioredoxin reductase 1, cytoplasmic [Bos tauru...   719   0.0  
Alignment   gi|XP_002697197.1| PREDICTED: thioredoxin reductase 3 [Bos taur...   600   e-173
Alignment   gi|NP_777051.1| thioredoxin reductase 2, mitochondrial precurso...   401   e-112
Alignment   gi|NP_001107662.1| glutathione reductase, mitochondrial [Bos ta...   174   2e-43
Alignment   gi|NP_001193099.1| dihydrolipoyl dehydrogenase, mitochondrial [...   149   7e-36
Alignment   gi|XP_002686825.1| PREDICTED: dihydrolipoamide dehydrogenase [B...   149   7e-36

>ref|NP_777050.1| thioredoxin reductase 1, cytoplasmic [Bos taurus].
          Length = 499

 Score =  719 bits (1856), Expect = 0.0
 Identities = 351/406 (86%), Positives = 373/406 (91%)
 Frame = +2

Query: 374  MNGAEELPEMYDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCV 553
            MNG+++LPE YDYDLIII              +++K+VMVLDFVTPTPLGTRWGLGGTCV
Sbjct: 1    MNGSKDLPEPYDYDLIIIGGGSGGLAAAKEAAKYDKKVMVLDFVTPTPLGTRWGLGGTCV 60

Query: 554  NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL 733
            NVGCIPKKLMHQAALLGQALRDSRNYGWNVEET+KHDWERMTEAVQNHIGSLNWGYRVAL
Sbjct: 61   NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETVKHDWERMTEAVQNHIGSLNWGYRVAL 120

Query: 734  REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS 913
            REKKVTYENAYG+FVGPHRIKATNNKGKEKIYSAE+FLIATGERPRYLGIPGDKEYCISS
Sbjct: 121  REKKVTYENAYGEFVGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISS 180

Query: 914  DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 1093
            DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM
Sbjct: 181  DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 240

Query: 1094 EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI 1273
            +EHG+KFIRQFVPIKVEQIEAG PGRLRV AK+T+SD+TIEGEYNTVLLAIGRDACTR I
Sbjct: 241  QEHGIKFIRQFVPIKVEQIEAGTPGRLRVIAKSTDSDQTIEGEYNTVLLAIGRDACTRKI 300

Query: 1274 GLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGG 1453
            GLE VGV+INEKTGKIPVT+EEQTNVPY+YAIGDILEGK ELTP +IQAGRLLA RLYGG
Sbjct: 301  GLENVGVKINEKTGKIPVTEEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGG 360

Query: 1454 SHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
            S  + DYENVPTTVFTPLEYG+CG SEE AVEK GEE  E+   YF
Sbjct: 361  STVKCDYENVPTTVFTPLEYGSCGLSEEKAVEKFGEENVEVYHSYF 406


>ref|XP_002697197.1| PREDICTED: thioredoxin reductase 3 [Bos taurus].
          Length = 790

 Score =  600 bits (1547), Expect(2) = e-173
 Identities = 287/450 (63%), Positives = 356/450 (79%)
 Frame = +2

Query: 227  EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
            ++G  ++ ALSE+TS+  VP VFV R  +GG   T +A+Q G LQ+LL+ + A      Y
Sbjct: 251  DEGASVQEALSEITSQRTVPSVFVNRVHVGGCDHTFQAHQSGLLQQLLQQDPA------Y 304

Query: 407  DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
            DYDLI+I                 ++VMVLDFV P+P GT WGLGGTCVNVGCIPKKLMH
Sbjct: 305  DYDLIVIGGGSGGLSCAQEAAVLGRKVMVLDFVVPSPRGTAWGLGGTCVNVGCIPKKLMH 364

Query: 587  QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
            QAALLGQAL DSR +GW   + ++H W  MTEA+Q+HIGSL+WG+R+ALREK VTY N++
Sbjct: 365  QAALLGQALTDSRKFGWEYSQQVRHSWATMTEAIQSHIGSLSWGHRLALREKAVTYVNSF 424

Query: 767  GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 946
            G+FV  H++KATN KG+E +Y+A KF+IATGERPRYLGIPGD+EYCI+SDDLFSLPYCPG
Sbjct: 425  GEFVEHHKVKATNEKGQEVLYTAAKFVIATGERPRYLGIPGDREYCITSDDLFSLPYCPG 484

Query: 947  KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
             TLVVGASYVALECAGFLAG+GL+VTVMVRS+LLRGFDQ+MA K+G  M++ GV+F+R+F
Sbjct: 485  ATLVVGASYVALECAGFLAGLGLEVTVMVRSVLLRGFDQEMAEKVGASMQQLGVRFLRKF 544

Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
            VP++V+Q+E G+PGRL+V AK+T   ETIEG YNTVLLAIGRD+CT+ +GLE +GV ++E
Sbjct: 545  VPVEVQQLERGLPGRLKVVAKSTEGTETIEGIYNTVLLAIGRDSCTKKLGLEKIGVNVSE 604

Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
            KTGKIPV DEEQT+V YVYA+GD+LEGKP+LTP ++QAG+LLA RL+GG   + DY NVP
Sbjct: 605  KTGKIPVNDEEQTSVSYVYAVGDVLEGKPQLTPVAVQAGKLLARRLFGGRSEKCDYVNVP 664

Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
            T VFTPLEYG CG SEE A E    E   +
Sbjct: 665  TVVFTPLEYGCCGYSEEKAGEVYQAENLNV 694



 Score = 30.0 bits (66), Expect(2) = e-173
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +1

Query: 1576 YHSLLWPLEWTI 1611
            YH+L WPLEWT+
Sbjct: 695  YHTLFWPLEWTV 706


>ref|NP_777051.1| thioredoxin reductase 2, mitochondrial precursor [Bos taurus].
          Length = 511

 Score =  401 bits (1031), Expect = e-112
 Identities = 213/396 (53%), Positives = 264/396 (66%), Gaps = 2/396 (0%)
 Frame = +2

Query: 410  YDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQ 589
            YDL++I              +  K+V VLD+V P+P GTRWGLGGTCVNVGCIPKKLMHQ
Sbjct: 28   YDLLVIGGGSGGLACAKEAAQLGKKVAVLDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQ 87

Query: 590  AALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAYG 769
            AALLG  +RD+ +YGW V +   H W  + +AVQNH+ SLNWG+R+ L+++KV Y N   
Sbjct: 88   AALLGGMIRDAPHYGWGVAQA-PHSWATLADAVQNHVKSLNWGHRIQLQDRKVKYFNVKA 146

Query: 770  QFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRY-LGIPGDKEYCISSDDLFSLPYCPG 946
             FV  H +   +  G+E + SAE  +IATG RPRY   I G  EY I+SDDLF L   PG
Sbjct: 147  SFVDTHTVCGVSKGGEETLLSAEHIVIATGGRPRYPTHIEGALEYGITSDDLFWLKESPG 206

Query: 947  KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
            KTLVVGASYVALECAG L G+GLD TVM+RS+ LR FDQ MA+ + EHM  HG + +R  
Sbjct: 207  KTLVVGASYVALECAGLLTGLGLDTTVMIRSVPLRAFDQQMASLVTEHMAGHGTRILRGC 266

Query: 1127 VPIKVEQIEAGMPGR-LRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEIN 1303
             P KVE++    PG+ LRVT     SD    G ++TVL AIGR   T ++ LE  GV  N
Sbjct: 267  APEKVEKL----PGQQLRVTWVDLTSDRKDAGTFDTVLWAIGRVPETASLNLEKAGVHTN 322

Query: 1304 EKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENV 1483
              TGKI V  +E T+VP++YAIGD+ EG+PELTP +I AGRLLA RL G +    DY +V
Sbjct: 323  PVTGKILVDAQETTSVPHIYAIGDVAEGRPELTPTAIMAGRLLAQRLSGRTSDLMDYSSV 382

Query: 1484 PTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
            PTTVFTPLEYG  G SEE AV + GEE  E+   ++
Sbjct: 383  PTTVFTPLEYGCVGLSEEAAVARHGEEHVEVYHAFY 418


>ref|NP_001107662.1| glutathione reductase, mitochondrial [Bos taurus].
          Length = 519

 Score =  174 bits (442), Expect = 2e-43
 Identities = 118/352 (33%), Positives = 189/352 (53%), Gaps = 6/352 (1%)
 Frame = +2

Query: 527  RWGLGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGS 706
            R  LGGTCVNVGC+PKK+M   A+  + + D  +YG+   E+ K +W  + E    ++  
Sbjct: 92   RHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHVDYGFQSCES-KFNWRIIKEKRDAYVSR 150

Query: 707  LNWGYRVALREKKVTYENAYGQFV-GPHRIKATNNKGKEKIYSAEKFLIATG---ERPRY 874
            LN  Y+  L +  +   + +  F   P      N K     Y+A   LIATG     P+ 
Sbjct: 151  LNTIYQNNLTKSHIDIIHGHAAFTCDPQPTVEVNGKK----YTAPHILIATGGVPSVPQE 206

Query: 875  LGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVR-SILLR 1051
              IPG     I+SD  F L   P ++++VGA Y+A+E AG L+ +G   ++M+R   +LR
Sbjct: 207  SQIPG-ASLGITSDGFFQLEELPRRSVIVGAGYIAVEIAGILSALGSKTSIMIRHDKVLR 265

Query: 1052 GFDQDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNT 1231
             FD  +++   E +E  G++ ++     +V++  +G+  R+  +        T   + + 
Sbjct: 266  TFDSIISSNCTEELENAGIEVLKYSQVREVKKTSSGLELRMVTSIPGREPTFTTIADVDC 325

Query: 1232 VLLAIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGS 1411
            +L AIGRD  +  + L  +G++ ++K G I V + + TNV  VYA+GD+  GK  LTP +
Sbjct: 326  LLWAIGRDPNSWGLNLNKLGIQTDDK-GHIIVDEFQNTNVKGVYAVGDVC-GKALLTPVA 383

Query: 1412 IQAGRLLAXRLYG-GSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEE 1564
            I AGR LA RL+      + DY+N+PT VF+    G  G +E+ A+ K G+E
Sbjct: 384  IAAGRKLAHRLFECKEDSKLDYDNIPTVVFSHPPIGTVGLTEDEAIYKYGKE 435


>ref|NP_001193099.1| dihydrolipoyl dehydrogenase, mitochondrial [Bos taurus].
          Length = 509

 Score =  149 bits (376), Expect = 7e-36
 Identities = 105/344 (30%), Positives = 176/344 (51%), Gaps = 5/344 (1%)
 Frame = +2

Query: 536  LGGTCVNVGCIPKK-LMHQAALLGQAL-RDSRNYGWNVEETIKHDWERMTEAVQNHIGSL 709
            LGGTC+NVGCIP K L++ +     A  +D  + G  + E ++ + E+M E   N + +L
Sbjct: 76   LGGTCLNVGCIPSKALLNNSHFYHLAHGKDFASRGIEMSE-VRLNLEKMMEQKSNAVKAL 134

Query: 710  NWGYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATG-ERPRYLGIP 886
              G     ++ KV + N YG+  G +++ AT   G  ++   +  LIATG E   + GI 
Sbjct: 135  TGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGSTQVIDTKNILIATGSEVTPFPGIT 194

Query: 887  GDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM--VRSILLRGFD 1060
             D++  +SS    SL   P K +V+GA  + +E       +G DVT +  +  +   G D
Sbjct: 195  IDEDTIVSSTGALSLKKVPEKLVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGID 254

Query: 1061 QDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLL 1240
             +++      +++ G KF    +  KV        G++ V+ +A +  +      + +L+
Sbjct: 255  MEISKNFQRILQKQGFKF---KLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLV 311

Query: 1241 AIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQA 1420
             IGR   T+N+GLE +G+E++ + G+IPV    QT +P +YAIGD++ G P L   +   
Sbjct: 312  CIGRRPFTQNLGLEELGIELDTR-GRIPVNTRFQTKIPNIYAIGDVVAG-PMLAHKAEDE 369

Query: 1421 GRLLAXRLYGGSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEK 1552
            G +    + GG+    DY  VP+ ++T  E    G SEE   E+
Sbjct: 370  GIICVEGMAGGA-VHIDYNCVPSVIYTHPEVAWVGKSEEQLKEE 412


>ref|XP_002686825.1| PREDICTED: dihydrolipoamide dehydrogenase [Bos taurus].
          Length = 509

 Score =  149 bits (376), Expect = 7e-36
 Identities = 105/344 (30%), Positives = 176/344 (51%), Gaps = 5/344 (1%)
 Frame = +2

Query: 536  LGGTCVNVGCIPKK-LMHQAALLGQAL-RDSRNYGWNVEETIKHDWERMTEAVQNHIGSL 709
            LGGTC+NVGCIP K L++ +     A  +D  + G  + E ++ + E+M E   N + +L
Sbjct: 76   LGGTCLNVGCIPSKALLNNSHFYHLAHGKDFASRGIEMSE-VRLNLEKMMEQKSNAVKAL 134

Query: 710  NWGYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATG-ERPRYLGIP 886
              G     ++ KV + N YG+  G +++ AT   G  ++   +  LIATG E   + GI 
Sbjct: 135  TGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGSTQVIDTKNILIATGSEVTPFPGIT 194

Query: 887  GDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM--VRSILLRGFD 1060
             D++  +SS    SL   P K +V+GA  + +E       +G DVT +  +  +   G D
Sbjct: 195  IDEDTIVSSTGALSLKKVPEKLVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGID 254

Query: 1061 QDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLL 1240
             +++      +++ G KF    +  KV        G++ V+ +A +  +      + +L+
Sbjct: 255  MEISKNFQRILQKQGFKF---KLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLV 311

Query: 1241 AIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQA 1420
             IGR   T+N+GLE +G+E++ + G+IPV    QT +P +YAIGD++ G P L   +   
Sbjct: 312  CIGRRPFTQNLGLEELGIELDTR-GRIPVNTRFQTKIPNIYAIGDVVAG-PMLAHKAEDE 369

Query: 1421 GRLLAXRLYGGSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEK 1552
            G +    + GG+    DY  VP+ ++T  E    G SEE   E+
Sbjct: 370  GIICVEGMAGGA-VHIDYNCVPSVIYTHPEVAWVGKSEEQLKEE 412


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 62,567,015
Number of extensions: 1732155
Number of successful extensions: 7979
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 7870
Number of HSP's successfully gapped: 7
Length of query: 537
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 430
Effective length of database: 14,140,958
Effective search space: 6080611940
Effective search space used: 6080611940
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003094
         (1612 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001116145.1| thioredoxin reductase 1, cytoplasmic [Canis ...   797   0.0  
Alignment   gi|NP_001116250.1| thioredoxin reductase 3 [Canis lupus familia...   617   e-179
Alignment   gi|XP_850181.1| PREDICTED: similar to thioredoxin reductase 2 i...   412   e-115
Alignment   gi|XP_532813.2| PREDICTED: similar to Glutathione reductase, mi...   179   5e-45
Alignment   gi|NP_001003294.1| dihydrolipoyl dehydrogenase, mitochondrial p...   143   5e-34
Alignment   gi|XP_855591.1| PREDICTED: dihydrolipoamide: NAD+ oxidoreductas...   142   9e-34

>ref|NP_001116145.1| thioredoxin reductase 1, cytoplasmic [Canis lupus familiaris].
          Length = 655

 Score =  797 bits (2058), Expect = 0.0
 Identities = 392/456 (85%), Positives = 414/456 (90%)
 Frame = +2

Query: 224  AEDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEM 403
            AED RGLE ALSELT ETD PVVFVKRR IGGHG TLKAYQEGRLQ LL MNG+E+LPE+
Sbjct: 107  AEDARGLELALSELTPETDAPVVFVKRRNIGGHGPTLKAYQEGRLQNLLNMNGSEDLPEV 166

Query: 404  YDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLM 583
            YDYDLIII              R+NK++MVLDFVTPTP GTRWGLGGTCVNVGCIPKKLM
Sbjct: 167  YDYDLIIIGGGSGGLAAAKEAARYNKKIMVLDFVTPTPRGTRWGLGGTCVNVGCIPKKLM 226

Query: 584  HQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENA 763
            HQAALLGQAL+DSRNYGW+ EET+KHDW++MTEAVQNHIGSLNWGYRVALREKKVTYENA
Sbjct: 227  HQAALLGQALQDSRNYGWSTEETVKHDWDKMTEAVQNHIGSLNWGYRVALREKKVTYENA 286

Query: 764  YGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCP 943
            YGQFVGPHRIKATNNKGKEKIYSAE+FLIATGERPRYLGIPGD+EYCISSDDLFSLPYCP
Sbjct: 287  YGQFVGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDREYCISSDDLFSLPYCP 346

Query: 944  GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQ 1123
            GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQ
Sbjct: 347  GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQ 406

Query: 1124 FVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEIN 1303
            FVPIKVEQIEAG PGRLRV A++T+S ETIEGEYNTVLLAIGRDACTR IGLETVGV+IN
Sbjct: 407  FVPIKVEQIEAGTPGRLRVVAQSTSSSETIEGEYNTVLLAIGRDACTRKIGLETVGVKIN 466

Query: 1304 EKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENV 1483
            EKTGKIPVTDEEQTNVPY+YAIGDILEGK ELTP +IQAGRLLA RLY GS+ + DYENV
Sbjct: 467  EKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYAGSNVKCDYENV 526

Query: 1484 PTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
            PTTVFTPLEYGACG SEE AVEK GEE  E+   YF
Sbjct: 527  PTTVFTPLEYGACGLSEERAVEKFGEENIEVYHSYF 562


>ref|NP_001116250.1| thioredoxin reductase 3 [Canis lupus familiaris].
          Length = 586

 Score =  617 bits (1592), Expect(2) = e-179
 Identities = 300/450 (66%), Positives = 358/450 (79%)
 Frame = +2

Query: 227  EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
            +DG  ++  LSE+T++  VP +FV +  +GG  +T +A+Q G LQKLL+ + A      Y
Sbjct: 45   DDGANVQEVLSEITNQRTVPNIFVNKVHMGGCDRTFQAHQSGLLQKLLQEDSA------Y 98

Query: 407  DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
            DYDLI+I                 K+VMVLDFV P+P GT WGLGGTCVNVGCIPKKLMH
Sbjct: 99   DYDLIVIGGGSGGLACAQEAAILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCIPKKLMH 158

Query: 587  QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
            QAALLGQALRD+R +GW   + +KH WE MTEA+QNHIGSLNWGYR++LREK V Y N+Y
Sbjct: 159  QAALLGQALRDARKFGWEYSQQVKHTWETMTEAIQNHIGSLNWGYRLSLREKAVAYVNSY 218

Query: 767  GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 946
            G+FV  H+IKATN KG+E  Y+A KF++ATG+RPRYLGI GDKEYCI+SDDLFSLPYCPG
Sbjct: 219  GEFVEHHKIKATNRKGQETCYTAAKFVLATGQRPRYLGIQGDKEYCITSDDLFSLPYCPG 278

Query: 947  KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
            KTLVVGASYVALECAGFLAGIGLDVT+MVRSILLRGFDQ+MA K+G +ME+HGVKF+R+F
Sbjct: 279  KTLVVGASYVALECAGFLAGIGLDVTIMVRSILLRGFDQEMAEKVGSYMEQHGVKFLRKF 338

Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
            VP+ V+Q+E G PG+L+V AK+T   ETIE  YNTVLLAIGRD+CTR IGLE +GV+INE
Sbjct: 339  VPVLVQQLEKGSPGKLKVVAKSTEGPETIEEIYNTVLLAIGRDSCTRKIGLEKIGVKINE 398

Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
            K+GKIPV D EQTNVPYVYA+GDILEGK ELTP +IQAG+LLA RL+ G   + DY NVP
Sbjct: 399  KSGKIPVNDVEQTNVPYVYAVGDILEGKLELTPVAIQAGKLLARRLFAGRLEKCDYVNVP 458

Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
            TTVFTPLEYG CG SEE A+E   +E  E+
Sbjct: 459  TTVFTPLEYGCCGLSEEKAIEMYKKENLEV 488



 Score = 30.0 bits (66), Expect(2) = e-179
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +1

Query: 1576 YHSLLWPLEWTI 1611
            YH+L WPLEWT+
Sbjct: 489  YHTLFWPLEWTV 500


>ref|XP_850181.1| PREDICTED: similar to thioredoxin reductase 2 isoform 1 precursor
            [Canis familiaris].
          Length = 509

 Score =  412 bits (1058), Expect = e-115
 Identities = 210/396 (53%), Positives = 270/396 (68%), Gaps = 1/396 (0%)
 Frame = +2

Query: 407  DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
            +YDL++I              +  K+V V+D+V P+P GT+WGLGGTCVNVGCIPKKLMH
Sbjct: 26   NYDLLVIGGGSGGLACAKEAAQLGKKVAVVDYVEPSPRGTKWGLGGTCVNVGCIPKKLMH 85

Query: 587  QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
            QAALLG  +RD+ +YGW+V + + HDW  M EAVQNH+ SLNWG+RV L+++KVTY N  
Sbjct: 86   QAALLGSMIRDAPHYGWDVAQPVLHDWRTMAEAVQNHVKSLNWGHRVQLQDRKVTYFNVK 145

Query: 767  GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRY-LGIPGDKEYCISSDDLFSLPYCP 943
              FV  H +      GKE + SAE  +IATG RPRY   I G  EY I+SDD+F L   P
Sbjct: 146  ASFVNEHTVCGVAKGGKETLLSAEHIVIATGGRPRYPTHIEGALEYGITSDDIFWLKESP 205

Query: 944  GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQ 1123
            GKTLVVGASYVALECAGFL G+GLD T+M+RSI LRGFDQ M++ + E+M   G +F+R 
Sbjct: 206  GKTLVVGASYVALECAGFLTGLGLDTTIMIRSIPLRGFDQQMSSLVTEYMASQGTRFLRG 265

Query: 1124 FVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEIN 1303
              P +V ++     G+L+VT +   S +   G ++TVL AIGR   T+++ LE  GV  N
Sbjct: 266  CTPSRVRRLP---DGQLQVTWENLTSGKEDVGTFDTVLWAIGRIPETKSLNLEKAGVNTN 322

Query: 1304 EKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENV 1483
              + KI V  +E T++P++YAIGD+ EG+PELTP +I AGRLLA RL G +    DY+NV
Sbjct: 323  PNSQKILVNAQEATSIPHIYAIGDVAEGRPELTPTAIMAGRLLAQRLCGQASDVMDYDNV 382

Query: 1484 PTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
            PTTVFTPLEYG  G SEE AV + GEE  E+   Y+
Sbjct: 383  PTTVFTPLEYGCVGLSEEEAVTRHGEEHVEVYHAYY 418


>ref|XP_532813.2| PREDICTED: similar to Glutathione reductase, mitochondrial precursor
            (GR) (GRase) [Canis familiaris].
          Length = 521

 Score =  179 bits (455), Expect = 5e-45
 Identities = 118/350 (33%), Positives = 192/350 (54%), Gaps = 7/350 (2%)
 Frame = +2

Query: 536  LGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNW 715
            LGGTCVNVGC+PKK+M   A+  + + D  +YG+   E+ K +W  + E    ++  LN 
Sbjct: 97   LGGTCVNVGCVPKKVMWNTAVHSEFMHDHVDYGFQSCES-KFNWRVIKEKRDAYVSRLNT 155

Query: 716  GYRVALREKKVTYENAYGQFV--GPHRIKATNNKGKEKIYSAEKFLIATG---ERPRYLG 880
             Y+  L +  +   + +  F       I+   NK     Y+A   LIATG    RP+   
Sbjct: 156  IYQNNLTKSHIEIIHGHAAFTCDSEPTIEVNGNK-----YTAPHILIATGGVPSRPQESQ 210

Query: 881  IPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVR-SILLRGF 1057
            IPG     I+SD  F L   PG++++VGA Y+A+E AG L+ +G   ++M+R   +LR F
Sbjct: 211  IPG-ASLGITSDGFFQLEELPGRSVIVGAGYIAVEIAGILSALGSKTSLMIRHDKVLRNF 269

Query: 1058 DQDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVL 1237
            D  +++   E +E  G++ ++     +V++  +G+   +  +A       T   + + +L
Sbjct: 270  DSIISSNCTEELENSGIEVLKYSQVKEVKKTSSGLELCMITSAPGRKPTLTTIPDVDCLL 329

Query: 1238 LAIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQ 1417
             AIGRD  +  + L+ VG++ ++K G I V + + T+V  +YA+GD+  GK  LTP +I 
Sbjct: 330  WAIGRDPNSSGLNLDKVGIQTDDK-GHIIVDEFQNTSVKGIYAVGDVC-GKALLTPVAIA 387

Query: 1418 AGRLLAXRLYG-GSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEE 1564
            AGR LA RL+      + DY+N+PT VF+    G  G +E+ A+ K G+E
Sbjct: 388  AGRKLAHRLFECKEDSKLDYDNIPTVVFSHPPIGTVGLTEDEAIYKYGKE 437


>ref|NP_001003294.1| dihydrolipoyl dehydrogenase, mitochondrial precursor [Canis lupus
            familiaris].
          Length = 509

 Score =  143 bits (360), Expect = 5e-34
 Identities = 102/344 (29%), Positives = 173/344 (50%), Gaps = 5/344 (1%)
 Frame = +2

Query: 536  LGGTCVNVGCIPKK-LMHQAALLGQAL-RDSRNYGWNVEETIKHDWERMTEAVQNHIGSL 709
            LGGTC+NVGCIP K L++ +     A  +D  + G  + E ++ + E+M E     + +L
Sbjct: 76   LGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSE-VRLNLEKMMEQKSTAVKAL 134

Query: 710  NWGYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATG-ERPRYLGIP 886
              G     ++ KV + N YG+  G +++ A    G  ++   +  LIATG E   + GI 
Sbjct: 135  TGGIAHLFKQNKVVHVNGYGKITGKNQVTAKKADGSTQVIDTKNILIATGSEVTPFPGIT 194

Query: 887  GDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM--VRSILLRGFD 1060
             D++  +SS    SL   P K +V+GA  + +E       +G DVT +  +  +   G D
Sbjct: 195  IDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGID 254

Query: 1061 QDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLL 1240
             +++      +++ G KF    +  KV        G++ V+ +  +  +      + +L+
Sbjct: 255  MEISKNFQRILQKQGFKF---KLNTKVTGATKKSDGKIDVSIEGASGGKAEVITCDVLLV 311

Query: 1241 AIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQA 1420
             IGR   T+N+GLE +G+E++ + G+IPV    QT +P +YAIGD++ G P L   +   
Sbjct: 312  CIGRRPFTQNLGLEELGIELDPR-GRIPVNTRFQTKIPNIYAIGDVVAG-PMLAHKAEDE 369

Query: 1421 GRLLAXRLYGGSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEK 1552
            G +    + GG+    DY  VP+ ++T  E    G SEE   E+
Sbjct: 370  GIICVEGMAGGA-VPIDYNCVPSVIYTHPEVAWVGKSEEQLKEE 412


>ref|XP_855591.1| PREDICTED: dihydrolipoamide: NAD+ oxidoreductase [Canis familiaris].
          Length = 509

 Score =  142 bits (358), Expect = 9e-34
 Identities = 102/344 (29%), Positives = 172/344 (50%), Gaps = 5/344 (1%)
 Frame = +2

Query: 536  LGGTCVNVGCIPKK-LMHQAALLGQAL-RDSRNYGWNVEETIKHDWERMTEAVQNHIGSL 709
            LGGTC+NVGCIP K L++ +     A  +D  + G  + E ++ + E+M E     + +L
Sbjct: 76   LGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSE-VRLNLEKMMEQKSTAVKAL 134

Query: 710  NWGYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATG-ERPRYLGIP 886
              G     ++ KV + N YG+  G +++ A    G  ++   +  LIATG E   + GI 
Sbjct: 135  TGGIAHLFKQNKVVHVNGYGKITGKNQVTAKKADGSTQVIDTKNILIATGSEVTPFPGIT 194

Query: 887  GDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM--VRSILLRGFD 1060
             D++  +SS    SL   P K +V+GA  + +E       +G DVT +  +  +   G D
Sbjct: 195  IDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGID 254

Query: 1061 QDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLL 1240
             +++      +++ G KF    +  KV        G++ V  +  +  +      + +L+
Sbjct: 255  MEISKNFQRILQKQGFKF---KLNTKVTGATKKSDGKIDVFIEGASGGKAEVITCDVLLV 311

Query: 1241 AIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQA 1420
             IGR   T+N+GLE +G+E++ + G+IPV    QT +P +YAIGD++ G P L   +   
Sbjct: 312  CIGRRPFTQNLGLEELGIELDPR-GRIPVNTRFQTKIPNIYAIGDVVAG-PMLAHKAEDE 369

Query: 1421 GRLLAXRLYGGSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEK 1552
            G +    + GG+    DY  VP+ ++T  E    G SEE   E+
Sbjct: 370  GIICVEGMAGGA-VHIDYNCVPSVIYTHPEVAWVGKSEEQLKEE 412


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 65,374,459
Number of extensions: 1792454
Number of successful extensions: 7928
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 7819
Number of HSP's successfully gapped: 7
Length of query: 537
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 429
Effective length of database: 15,274,216
Effective search space: 6552638664
Effective search space used: 6552638664
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003094
         (1612 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001087240.1| thioredoxin reductase 1, cytoplasmic isoform...   788   0.0  
Alignment   gi|NP_003321.3| thioredoxin reductase 1, cytoplasmic isoform 1 ...   788   0.0  
Alignment   gi|NP_877393.1| thioredoxin reductase 1, cytoplasmic isoform 2 ...   708   0.0  
Alignment   gi|NP_877420.1| thioredoxin reductase 1, cytoplasmic isoform 2 ...   708   0.0  
Alignment   gi|NP_877419.1| thioredoxin reductase 1, cytoplasmic isoform 2 ...   708   0.0  
Alignment   gi|NP_443115.1| thioredoxin reductase 3 isoform 1 [Homo sapiens].    617   e-179
Alignment   gi|NP_001166984.1| thioredoxin reductase 3 isoform 2 [Homo sapi...   580   e-165
Alignment   gi|NP_006431.2| thioredoxin reductase 2, mitochondrial precurso...   417   e-116
Alignment   gi|NP_000628.2| glutathione reductase, mitochondrial isoform 1 ...   169   7e-42
Alignment   gi|NP_001182031.1| glutathione reductase, mitochondrial isoform...   154   3e-37

>ref|NP_001087240.1| thioredoxin reductase 1, cytoplasmic isoform 3 [Homo sapiens].
          Length = 649

 Score =  788 bits (2034), Expect = 0.0
 Identities = 387/455 (85%), Positives = 410/455 (90%)
 Frame = +2

Query: 227  EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
            EDGR LE  LSEL +ETD+PVVFVK+RKIGGHG TLKAYQEGRLQKLLKMNG E+LP+ Y
Sbjct: 102  EDGRALEGTLSELAAETDLPVVFVKQRKIGGHGPTLKAYQEGRLQKLLKMNGPEDLPKSY 161

Query: 407  DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
            DYDLIII              ++ K+VMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH
Sbjct: 162  DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 221

Query: 587  QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
            QAALLGQAL+DSRNYGW VEET+KHDW+RM EAVQNHIGSLNWGYRVALREKKV YENAY
Sbjct: 222  QAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAY 281

Query: 767  GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 946
            GQF+GPHRIKATNNKGKEKIYSAE+FLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG
Sbjct: 282  GQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 341

Query: 947  KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
            KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHG+KFIRQF
Sbjct: 342  KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQF 401

Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
            VPIKVEQIEAG PGRLRV A++TNS+E IEGEYNTV+LAIGRDACTR IGLETVGV+INE
Sbjct: 402  VPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINE 461

Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
            KTGKIPVTDEEQTNVPY+YAIGDILE K ELTP +IQAGRLLA RLY GS  + DYENVP
Sbjct: 462  KTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVP 521

Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
            TTVFTPLEYGACG SEE AVEK GEE  E+   YF
Sbjct: 522  TTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYF 556


>ref|NP_003321.3| thioredoxin reductase 1, cytoplasmic isoform 1 [Homo sapiens].
          Length = 551

 Score =  788 bits (2034), Expect = 0.0
 Identities = 387/455 (85%), Positives = 410/455 (90%)
 Frame = +2

Query: 227  EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
            EDGR LE  LSEL +ETD+PVVFVK+RKIGGHG TLKAYQEGRLQKLLKMNG E+LP+ Y
Sbjct: 4    EDGRALEGTLSELAAETDLPVVFVKQRKIGGHGPTLKAYQEGRLQKLLKMNGPEDLPKSY 63

Query: 407  DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
            DYDLIII              ++ K+VMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH
Sbjct: 64   DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 123

Query: 587  QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
            QAALLGQAL+DSRNYGW VEET+KHDW+RM EAVQNHIGSLNWGYRVALREKKV YENAY
Sbjct: 124  QAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAY 183

Query: 767  GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 946
            GQF+GPHRIKATNNKGKEKIYSAE+FLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG
Sbjct: 184  GQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 243

Query: 947  KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
            KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHG+KFIRQF
Sbjct: 244  KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQF 303

Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
            VPIKVEQIEAG PGRLRV A++TNS+E IEGEYNTV+LAIGRDACTR IGLETVGV+INE
Sbjct: 304  VPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINE 363

Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
            KTGKIPVTDEEQTNVPY+YAIGDILE K ELTP +IQAGRLLA RLY GS  + DYENVP
Sbjct: 364  KTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVP 423

Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
            TTVFTPLEYGACG SEE AVEK GEE  E+   YF
Sbjct: 424  TTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYF 458


>ref|NP_877393.1| thioredoxin reductase 1, cytoplasmic isoform 2 [Homo sapiens].
          Length = 499

 Score =  708 bits (1827), Expect = 0.0
 Identities = 346/406 (85%), Positives = 366/406 (90%)
 Frame = +2

Query: 374  MNGAEELPEMYDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCV 553
            MNG E+LP+ YDYDLIII              ++ K+VMVLDFVTPTPLGTRWGLGGTCV
Sbjct: 1    MNGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCV 60

Query: 554  NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL 733
            NVGCIPKKLMHQAALLGQAL+DSRNYGW VEET+KHDW+RM EAVQNHIGSLNWGYRVAL
Sbjct: 61   NVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVAL 120

Query: 734  REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS 913
            REKKV YENAYGQF+GPHRIKATNNKGKEKIYSAE+FLIATGERPRYLGIPGDKEYCISS
Sbjct: 121  REKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISS 180

Query: 914  DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 1093
            DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM
Sbjct: 181  DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 240

Query: 1094 EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI 1273
            EEHG+KFIRQFVPIKVEQIEAG PGRLRV A++TNS+E IEGEYNTV+LAIGRDACTR I
Sbjct: 241  EEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKI 300

Query: 1274 GLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGG 1453
            GLETVGV+INEKTGKIPVTDEEQTNVPY+YAIGDILE K ELTP +IQAGRLLA RLY G
Sbjct: 301  GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAG 360

Query: 1454 SHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
            S  + DYENVPTTVFTPLEYGACG SEE AVEK GEE  E+   YF
Sbjct: 361  STVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYF 406


>ref|NP_877420.1| thioredoxin reductase 1, cytoplasmic isoform 2 [Homo sapiens].
          Length = 499

 Score =  708 bits (1827), Expect = 0.0
 Identities = 346/406 (85%), Positives = 366/406 (90%)
 Frame = +2

Query: 374  MNGAEELPEMYDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCV 553
            MNG E+LP+ YDYDLIII              ++ K+VMVLDFVTPTPLGTRWGLGGTCV
Sbjct: 1    MNGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCV 60

Query: 554  NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL 733
            NVGCIPKKLMHQAALLGQAL+DSRNYGW VEET+KHDW+RM EAVQNHIGSLNWGYRVAL
Sbjct: 61   NVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVAL 120

Query: 734  REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS 913
            REKKV YENAYGQF+GPHRIKATNNKGKEKIYSAE+FLIATGERPRYLGIPGDKEYCISS
Sbjct: 121  REKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISS 180

Query: 914  DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 1093
            DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM
Sbjct: 181  DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 240

Query: 1094 EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI 1273
            EEHG+KFIRQFVPIKVEQIEAG PGRLRV A++TNS+E IEGEYNTV+LAIGRDACTR I
Sbjct: 241  EEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKI 300

Query: 1274 GLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGG 1453
            GLETVGV+INEKTGKIPVTDEEQTNVPY+YAIGDILE K ELTP +IQAGRLLA RLY G
Sbjct: 301  GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAG 360

Query: 1454 SHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
            S  + DYENVPTTVFTPLEYGACG SEE AVEK GEE  E+   YF
Sbjct: 361  STVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYF 406


>ref|NP_877419.1| thioredoxin reductase 1, cytoplasmic isoform 2 [Homo sapiens].
          Length = 499

 Score =  708 bits (1827), Expect = 0.0
 Identities = 346/406 (85%), Positives = 366/406 (90%)
 Frame = +2

Query: 374  MNGAEELPEMYDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCV 553
            MNG E+LP+ YDYDLIII              ++ K+VMVLDFVTPTPLGTRWGLGGTCV
Sbjct: 1    MNGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCV 60

Query: 554  NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL 733
            NVGCIPKKLMHQAALLGQAL+DSRNYGW VEET+KHDW+RM EAVQNHIGSLNWGYRVAL
Sbjct: 61   NVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVAL 120

Query: 734  REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS 913
            REKKV YENAYGQF+GPHRIKATNNKGKEKIYSAE+FLIATGERPRYLGIPGDKEYCISS
Sbjct: 121  REKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISS 180

Query: 914  DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 1093
            DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM
Sbjct: 181  DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 240

Query: 1094 EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI 1273
            EEHG+KFIRQFVPIKVEQIEAG PGRLRV A++TNS+E IEGEYNTV+LAIGRDACTR I
Sbjct: 241  EEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKI 300

Query: 1274 GLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGG 1453
            GLETVGV+INEKTGKIPVTDEEQTNVPY+YAIGDILE K ELTP +IQAGRLLA RLY G
Sbjct: 301  GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAG 360

Query: 1454 SHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
            S  + DYENVPTTVFTPLEYGACG SEE AVEK GEE  E+   YF
Sbjct: 361  STVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYF 406


>ref|NP_443115.1| thioredoxin reductase 3 isoform 1 [Homo sapiens].
          Length = 643

 Score =  617 bits (1592), Expect(2) = e-179
 Identities = 302/450 (67%), Positives = 358/450 (79%)
 Frame = +2

Query: 227  EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
            +DG  ++  LSE+T++  VP +FV +  +GG  QT +AYQ G LQKLL+ + A      Y
Sbjct: 102  DDGARVQEVLSEITNQKTVPNIFVNKVHVGGCDQTFQAYQSGLLQKLLQEDLA------Y 155

Query: 407  DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
            DYDLIII                 K+VMVLDFV P+P GT WGLGGTCVNVGCIPKKLMH
Sbjct: 156  DYDLIIIGGGSGGLSCAKEAAILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCIPKKLMH 215

Query: 587  QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
            QAALLGQAL DSR +GW   + ++H+WE MT+A+QNHI SLNWGYR++LREK V Y N+Y
Sbjct: 216  QAALLGQALCDSRKFGWEYNQQVRHNWETMTKAIQNHISSLNWGYRLSLREKAVAYVNSY 275

Query: 767  GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 946
            G+FV  H+IKATN KG+E  Y+A +F+IATGERPRYLGI GDKEYCI+SDDLFSLPYCPG
Sbjct: 276  GEFVEHHKIKATNKKGQETYYTAAQFVIATGERPRYLGIQGDKEYCITSDDLFSLPYCPG 335

Query: 947  KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
            KTLVVGASYVALECAGFLAG GLDVTVMVRSILLRGFDQ+MA K+G +ME+HGVKF+R+F
Sbjct: 336  KTLVVGASYVALECAGFLAGFGLDVTVMVRSILLRGFDQEMAEKVGSYMEQHGVKFLRKF 395

Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
            +P+ V+Q+E G PG+L+V AK+T   ETIEG YNTVLLAIGRD+CTR IGLE +GV+INE
Sbjct: 396  IPVMVQQLEKGSPGKLKVLAKSTEGTETIEGVYNTVLLAIGRDSCTRKIGLEKIGVKINE 455

Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
            K+GKIPV D EQTNVPYVYA+GDILE KPELTP +IQ+G+LLA RL+G S  + DY NVP
Sbjct: 456  KSGKIPVNDVEQTNVPYVYAVGDILEDKPELTPVAIQSGKLLAQRLFGASLEKCDYINVP 515

Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
            TTVFTPLEYG CG SEE A+E   +E  EI
Sbjct: 516  TTVFTPLEYGCCGLSEEKAIEVYKKENLEI 545



 Score = 30.0 bits (66), Expect(2) = e-179
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +1

Query: 1576 YHSLLWPLEWTI 1611
            YH+L WPLEWT+
Sbjct: 546  YHTLFWPLEWTV 557


>ref|NP_001166984.1| thioredoxin reductase 3 isoform 2 [Homo sapiens].
          Length = 607

 Score =  580 bits (1494), Expect = e-165
 Identities = 286/449 (63%), Positives = 345/449 (76%)
 Frame = +2

Query: 227  EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
            +DG  ++  LSE+T++  VP +FV +  +GG  QT +AYQ G LQKLL+ + A      Y
Sbjct: 102  DDGARVQEVLSEITNQKTVPNIFVNKVHVGGCDQTFQAYQSGLLQKLLQEDLA------Y 155

Query: 407  DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
            DYDLIII                 K+VMVLDFV P+P GT WGLGGTCVNVGCIPKKLMH
Sbjct: 156  DYDLIIIGGGSGGLSCAKEAAILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCIPKKLMH 215

Query: 587  QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
            QAALLGQAL DSR +GW   + ++H+WE MT+A+QNHI SLNWGYR++LREK V Y N+Y
Sbjct: 216  QAALLGQALCDSRKFGWEYNQQVRHNWETMTKAIQNHISSLNWGYRLSLREKAVAYVNSY 275

Query: 767  GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 946
            G+FV  H+IKATN KG+E  Y+A +F+IATGERPRYLGI GDKEYCI+SDDLFSLPYCPG
Sbjct: 276  GEFVEHHKIKATNKKGQETYYTAAQFVIATGERPRYLGIQGDKEYCITSDDLFSLPYCPG 335

Query: 947  KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
            KTLVVGASYVALECAGFLAG GLDVTVMVRSILLRGFDQ+MA K+G +ME+HGVKF+R+F
Sbjct: 336  KTLVVGASYVALECAGFLAGFGLDVTVMVRSILLRGFDQEMAEKVGSYMEQHGVKFLRKF 395

Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
            +P+ V+Q+E G PG+L+V AK+T   ETIEG YNTVLLAIGRD+CTR IGLE +GV+INE
Sbjct: 396  IPVMVQQLEKGSPGKLKVLAKSTEGTETIEGVYNTVLLAIGRDSCTRKIGLEKIGVKINE 455

Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
            K+GKIPV D EQTNVPYVYA+GDILE KPELTP +IQ+G+LLA RL+G S      E + 
Sbjct: 456  KSGKIPVNDVEQTNVPYVYAVGDILEDKPELTPVAIQSGKLLAQRLFGAS-----LEKIY 510

Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYE 1573
             T+F PLE+   G        K+   K++
Sbjct: 511  HTLFWPLEWTVAGRENNTCYAKIICNKFD 539


>ref|NP_006431.2| thioredoxin reductase 2, mitochondrial precursor [Homo sapiens].
          Length = 524

 Score =  417 bits (1073), Expect = e-116
 Identities = 211/391 (53%), Positives = 271/391 (69%), Gaps = 1/391 (0%)
 Frame = +2

Query: 407  DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
            DYDL+++              +  ++V V+D+V P+P GTRWGLGGTCVNVGCIPKKLMH
Sbjct: 39   DYDLLVVGGGSGGLACAKEAAQLGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMH 98

Query: 587  QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
            QAALLG  ++D+ NYGW V + + HDW +M EAVQNH+ SLNWG+RV L+++KV Y N  
Sbjct: 99   QAALLGGLIQDAPNYGWEVAQPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK 158

Query: 767  GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRY-LGIPGDKEYCISSDDLFSLPYCP 943
              FV  H +      GKE + SA+  +IATG RPRY   I G  EY I+SDD+F L   P
Sbjct: 159  ASFVDEHTVCGVAKGGKEILLSADHIIIATGGRPRYPTHIEGALEYGITSDDIFWLKESP 218

Query: 944  GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQ 1123
            GKTLVVGASYVALECAGFL GIGLD T+M+RSI LRGFDQ M++ + EHM  HG +F+R 
Sbjct: 219  GKTLVVGASYVALECAGFLTGIGLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLRG 278

Query: 1124 FVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEIN 1303
              P +V ++     G+L+VT + + + +   G ++TVL AIGR   TR++ LE  GV+ +
Sbjct: 279  CAPSRVRRLP---DGQLQVTWEDSTTGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTS 335

Query: 1304 EKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENV 1483
              T KI V   E T+VP++YAIGD++EG+PELTP +I AGRLL  RL+GGS    DY+NV
Sbjct: 336  PDTQKILVDSREATSVPHIYAIGDVVEGRPELTPIAIMAGRLLVQRLFGGSSDLMDYDNV 395

Query: 1484 PTTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
            PTTVFTPLEYG  G SEE AV + G+E  E+
Sbjct: 396  PTTVFTPLEYGCVGLSEEEAVARHGQEHVEV 426


>ref|NP_000628.2| glutathione reductase, mitochondrial isoform 1 precursor [Homo
            sapiens].
          Length = 522

 Score =  169 bits (428), Expect = 7e-42
 Identities = 121/356 (33%), Positives = 188/356 (52%), Gaps = 13/356 (3%)
 Frame = +2

Query: 536  LGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNW 715
            LGGTCVNVGC+PKK+M   A+  + + D  +YG+   E  K +W  + E    ++  LN 
Sbjct: 98   LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEG-KFNWRVIKEKRDAYVSRLNA 156

Query: 716  GYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATG---ERPRYLGIP 886
             Y+  L +  +     +  F    +       GK+  Y+A   LIATG     P    IP
Sbjct: 157  IYQNNLTKSHIEIIRGHAAFTSDPK-PTIEVSGKK--YTAPHILIATGGMPSTPHESQIP 213

Query: 887  GDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVR-SILLRGFDQ 1063
            G     I+SD  F L   PG++++VGA Y+A+E AG L+ +G   ++M+R   +LR FD 
Sbjct: 214  G-ASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDS 272

Query: 1064 DMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGM--------PGRLRVTAKATNSDETIEG 1219
             ++    E +E  GV+ ++     +V++  +G+        PGRL V         T+  
Sbjct: 273  MISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVM--------TMIP 324

Query: 1220 EYNTVLLAIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPEL 1399
            + + +L AIGR   T+++ L  +G++ ++K G I V + + TNV  +YA+GD+  GK  L
Sbjct: 325  DVDCLLWAIGRVPNTKDLSLNKLGIQTDDK-GHIIVDEFQNTNVKGIYAVGDVC-GKALL 382

Query: 1400 TPGSIQAGRLLAXRLYG-GSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEE 1564
            TP +I AGR LA RL+      + DY N+PT VF+    G  G +E+ A+ K G E
Sbjct: 383  TPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIE 438


>ref|NP_001182031.1| glutathione reductase, mitochondrial isoform 2 precursor [Homo
            sapiens].
          Length = 493

 Score =  154 bits (388), Expect = 3e-37
 Identities = 116/347 (33%), Positives = 177/347 (51%), Gaps = 4/347 (1%)
 Frame = +2

Query: 536  LGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNW 715
            LGGTCVNVGC+PKK+M   A+  + + D  +YG+   E  K +W  + E    ++  LN 
Sbjct: 98   LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEG-KFNWRVIKEKRDAYVSRLNA 156

Query: 716  GYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATG---ERPRYLGIP 886
             Y+  L +  +     +  F    +       GK+  Y+A   LIATG     P    IP
Sbjct: 157  IYQNNLTKSHIEIIRGHAAFTSDPK-PTIEVSGKK--YTAPHILIATGGMPSTPHESQIP 213

Query: 887  GDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQD 1066
            G     I+SD  F L   PG++++VGA Y+A+E AG L+ +G   ++M+R          
Sbjct: 214  G-ASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIR---------- 262

Query: 1067 MANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAI 1246
                   H +   VK  +    ++V  + A +PGRL V         T+  + + +L AI
Sbjct: 263  -------HDKVKEVK--KTLSGLEVSMVTA-VPGRLPVM--------TMIPDVDCLLWAI 304

Query: 1247 GRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGR 1426
            GR   T+++ L  +G++ ++K G I V + + TNV  +YA+GD+  GK  LTP +I AGR
Sbjct: 305  GRVPNTKDLSLNKLGIQTDDK-GHIIVDEFQNTNVKGIYAVGDVC-GKALLTPVAIAAGR 362

Query: 1427 LLAXRLYG-GSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEE 1564
             LA RL+      + DY N+PT VF+    G  G +E+ A+ K G E
Sbjct: 363  KLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIE 409


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 64,124,462
Number of extensions: 1754394
Number of successful extensions: 7727
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 7643
Number of HSP's successfully gapped: 16
Length of query: 537
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 430
Effective length of database: 14,770,016
Effective search space: 6351106880
Effective search space used: 6351106880
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003094
         (1612 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001035988.1| thioredoxin reductase 1, cytoplasmic isoform...   707   0.0  
Alignment   gi|NP_001035979.1| thioredoxin reductase 1, cytoplasmic isoform...   698   0.0  
Alignment   gi|NP_001035978.1| thioredoxin reductase 1, cytoplasmic isoform...   698   0.0  
Alignment   gi|NP_056577.2| thioredoxin reductase 1, cytoplasmic isoform 2 ...   698   0.0  
Alignment   gi|NP_001171529.1| thioredoxin reductase 3 isoform 1 [Mus muscu...   606   e-175
Alignment   gi|NP_694802.2| thioredoxin reductase 3 isoform 2 [Mus musculus].    606   e-175
Alignment   gi|NP_038739.2| thioredoxin reductase 2, mitochondrial precurso...   411   e-115
Alignment   gi|NP_001171530.1| thioredoxin reductase 3 isoform 3 [Mus muscu...   219   2e-57
Alignment   gi|NP_001171531.1| thioredoxin reductase 3 isoform 4 [Mus muscu...   219   2e-57
Alignment   gi|NP_034474.4| glutathione reductase, mitochondrial precursor ...   178   9e-45

>ref|NP_001035988.1| thioredoxin reductase 1, cytoplasmic isoform 1 [Mus musculus].
          Length = 613

 Score =  707 bits (1824), Expect = 0.0
 Identities = 341/416 (81%), Positives = 377/416 (90%)
 Frame = +2

Query: 344  QEGRLQKLLKMNGAEELPEMYDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLG 523
            ++G+LQKL  MNG+++ P  YD+DLIII              +F+K+V+VLDFVTPTPLG
Sbjct: 105  KKGQLQKLPTMNGSKDPPGSYDFDLIIIGGGSGGLAAAKEAAKFDKKVLVLDFVTPTPLG 164

Query: 524  TRWGLGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIG 703
            TRWGLGGTCVNVGCIPKKLMHQAALLGQAL+DSRNYGW VE+T+KHDWE+MTE+VQ+HIG
Sbjct: 165  TRWGLGGTCVNVGCIPKKLMHQAALLGQALKDSRNYGWKVEDTVKHDWEKMTESVQSHIG 224

Query: 704  SLNWGYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGI 883
            SLNWGYRVALREKKV YENAYG+F+GPHRI ATNNKGKEKIYSAE+FLIATGERPRYLGI
Sbjct: 225  SLNWGYRVALREKKVVYENAYGRFIGPHRIVATNNKGKEKIYSAERFLIATGERPRYLGI 284

Query: 884  PGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQ 1063
            PGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQ
Sbjct: 285  PGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQ 344

Query: 1064 DMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLA 1243
            DMANKIGEHMEEHG+KFIRQFVP K+EQIEAG PGRLRVTA++TNS+ETIEGE+NTVLLA
Sbjct: 345  DMANKIGEHMEEHGIKFIRQFVPTKIEQIEAGTPGRLRVTAQSTNSEETIEGEFNTVLLA 404

Query: 1244 IGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAG 1423
            +GRD+CTR IGLETVGV+INEKTGKIPVTDEEQTNVPY+YAIGDILEGK ELTP +IQAG
Sbjct: 405  VGRDSCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAG 464

Query: 1424 RLLAXRLYGGSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
            RLLA RLYGGS+ + DY+NVPTTVFTPLEYG CG SEE AVEK GEE  E+   +F
Sbjct: 465  RLLAQRLYGGSNVKCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFF 520


>ref|NP_001035979.1| thioredoxin reductase 1, cytoplasmic isoform 2 [Mus musculus].
          Length = 499

 Score =  698 bits (1801), Expect = 0.0
 Identities = 336/406 (82%), Positives = 369/406 (90%)
 Frame = +2

Query: 374  MNGAEELPEMYDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCV 553
            MNG+++ P  YD+DLIII              +F+K+V+VLDFVTPTPLGTRWGLGGTCV
Sbjct: 1    MNGSKDPPGSYDFDLIIIGGGSGGLAAAKEAAKFDKKVLVLDFVTPTPLGTRWGLGGTCV 60

Query: 554  NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL 733
            NVGCIPKKLMHQAALLGQAL+DSRNYGW VE+T+KHDWE+MTE+VQ+HIGSLNWGYRVAL
Sbjct: 61   NVGCIPKKLMHQAALLGQALKDSRNYGWKVEDTVKHDWEKMTESVQSHIGSLNWGYRVAL 120

Query: 734  REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS 913
            REKKV YENAYG+F+GPHRI ATNNKGKEKIYSAE+FLIATGERPRYLGIPGDKEYCISS
Sbjct: 121  REKKVVYENAYGRFIGPHRIVATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISS 180

Query: 914  DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 1093
            DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM
Sbjct: 181  DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 240

Query: 1094 EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI 1273
            EEHG+KFIRQFVP K+EQIEAG PGRLRVTA++TNS+ETIEGE+NTVLLA+GRD+CTR I
Sbjct: 241  EEHGIKFIRQFVPTKIEQIEAGTPGRLRVTAQSTNSEETIEGEFNTVLLAVGRDSCTRTI 300

Query: 1274 GLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGG 1453
            GLETVGV+INEKTGKIPVTDEEQTNVPY+YAIGDILEGK ELTP +IQAGRLLA RLYGG
Sbjct: 301  GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGG 360

Query: 1454 SHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
            S+ + DY+NVPTTVFTPLEYG CG SEE AVEK GEE  E+   +F
Sbjct: 361  SNVKCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFF 406


>ref|NP_001035978.1| thioredoxin reductase 1, cytoplasmic isoform 2 [Mus musculus].
          Length = 499

 Score =  698 bits (1801), Expect = 0.0
 Identities = 336/406 (82%), Positives = 369/406 (90%)
 Frame = +2

Query: 374  MNGAEELPEMYDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCV 553
            MNG+++ P  YD+DLIII              +F+K+V+VLDFVTPTPLGTRWGLGGTCV
Sbjct: 1    MNGSKDPPGSYDFDLIIIGGGSGGLAAAKEAAKFDKKVLVLDFVTPTPLGTRWGLGGTCV 60

Query: 554  NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL 733
            NVGCIPKKLMHQAALLGQAL+DSRNYGW VE+T+KHDWE+MTE+VQ+HIGSLNWGYRVAL
Sbjct: 61   NVGCIPKKLMHQAALLGQALKDSRNYGWKVEDTVKHDWEKMTESVQSHIGSLNWGYRVAL 120

Query: 734  REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS 913
            REKKV YENAYG+F+GPHRI ATNNKGKEKIYSAE+FLIATGERPRYLGIPGDKEYCISS
Sbjct: 121  REKKVVYENAYGRFIGPHRIVATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISS 180

Query: 914  DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 1093
            DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM
Sbjct: 181  DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 240

Query: 1094 EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI 1273
            EEHG+KFIRQFVP K+EQIEAG PGRLRVTA++TNS+ETIEGE+NTVLLA+GRD+CTR I
Sbjct: 241  EEHGIKFIRQFVPTKIEQIEAGTPGRLRVTAQSTNSEETIEGEFNTVLLAVGRDSCTRTI 300

Query: 1274 GLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGG 1453
            GLETVGV+INEKTGKIPVTDEEQTNVPY+YAIGDILEGK ELTP +IQAGRLLA RLYGG
Sbjct: 301  GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGG 360

Query: 1454 SHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
            S+ + DY+NVPTTVFTPLEYG CG SEE AVEK GEE  E+   +F
Sbjct: 361  SNVKCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFF 406


>ref|NP_056577.2| thioredoxin reductase 1, cytoplasmic isoform 2 [Mus musculus].
          Length = 499

 Score =  698 bits (1801), Expect = 0.0
 Identities = 336/406 (82%), Positives = 369/406 (90%)
 Frame = +2

Query: 374  MNGAEELPEMYDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCV 553
            MNG+++ P  YD+DLIII              +F+K+V+VLDFVTPTPLGTRWGLGGTCV
Sbjct: 1    MNGSKDPPGSYDFDLIIIGGGSGGLAAAKEAAKFDKKVLVLDFVTPTPLGTRWGLGGTCV 60

Query: 554  NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL 733
            NVGCIPKKLMHQAALLGQAL+DSRNYGW VE+T+KHDWE+MTE+VQ+HIGSLNWGYRVAL
Sbjct: 61   NVGCIPKKLMHQAALLGQALKDSRNYGWKVEDTVKHDWEKMTESVQSHIGSLNWGYRVAL 120

Query: 734  REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS 913
            REKKV YENAYG+F+GPHRI ATNNKGKEKIYSAE+FLIATGERPRYLGIPGDKEYCISS
Sbjct: 121  REKKVVYENAYGRFIGPHRIVATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISS 180

Query: 914  DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 1093
            DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM
Sbjct: 181  DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 240

Query: 1094 EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI 1273
            EEHG+KFIRQFVP K+EQIEAG PGRLRVTA++TNS+ETIEGE+NTVLLA+GRD+CTR I
Sbjct: 241  EEHGIKFIRQFVPTKIEQIEAGTPGRLRVTAQSTNSEETIEGEFNTVLLAVGRDSCTRTI 300

Query: 1274 GLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGG 1453
            GLETVGV+INEKTGKIPVTDEEQTNVPY+YAIGDILEGK ELTP +IQAGRLLA RLYGG
Sbjct: 301  GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGG 360

Query: 1454 SHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
            S+ + DY+NVPTTVFTPLEYG CG SEE AVEK GEE  E+   +F
Sbjct: 361  SNVKCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFF 406


>ref|NP_001171529.1| thioredoxin reductase 3 isoform 1 [Mus musculus].
          Length = 652

 Score =  606 bits (1562), Expect(2) = e-175
 Identities = 293/450 (65%), Positives = 356/450 (79%)
 Frame = +2

Query: 227  EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
            +DG  ++  L+E++++  VP +FV +  +GG  +T +A+Q G LQKLL+ + A      +
Sbjct: 111  DDGASVQEVLTEISNQKTVPNIFVNKVHVGGCDRTFQAHQNGLLQKLLQDDSA------H 164

Query: 407  DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
            DYDLIII                 K+VMVLDFV P+P GT WGLGGTCVNVGCIPKKLMH
Sbjct: 165  DYDLIIIGGGSGGLSCAKEAANLGKKVMVLDFVVPSPQGTTWGLGGTCVNVGCIPKKLMH 224

Query: 587  QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
            QAALLG AL+D++ YGW   + +KH+WE MTEA+Q+HIGSLNWGYRV LREK VTY N++
Sbjct: 225  QAALLGHALQDAKKYGWEYNQQVKHNWEAMTEAIQSHIGSLNWGYRVTLREKGVTYVNSF 284

Query: 767  GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 946
            G+FV  H+IKATN KG+E  Y+A KF+IATGERPRYLGI GDKEYCI+SDDLFSLPYCPG
Sbjct: 285  GEFVDLHKIKATNKKGQETFYTASKFVIATGERPRYLGIQGDKEYCITSDDLFSLPYCPG 344

Query: 947  KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
             TLVVGASYV LECAGFLAG+GLDVTVMVRS+LLRGFDQ+MA K+G ++E+ GVKF R+F
Sbjct: 345  CTLVVGASYVGLECAGFLAGLGLDVTVMVRSVLLRGFDQEMAEKVGSYLEQQGVKFQRKF 404

Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
             PI V+Q+E G+PG+L+V AK+T   ET+EG YNTVLLAIGRD+CTR IGLE +GV+INE
Sbjct: 405  TPILVQQLEKGLPGKLKVVAKSTEGPETVEGIYNTVLLAIGRDSCTRKIGLEKIGVKINE 464

Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
            K GKIPV D EQTNVP+VYAIGDIL+GKPELTP +IQAG+LLA RL+G S  + DY N+P
Sbjct: 465  KNGKIPVNDVEQTNVPHVYAIGDILDGKPELTPVAIQAGKLLARRLFGVSLEKCDYINIP 524

Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
            TTVFTPLEYG CG SEE A+E   +E  E+
Sbjct: 525  TTVFTPLEYGCCGLSEEKAIEMYKKENLEV 554



 Score = 30.0 bits (66), Expect(2) = e-175
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +1

Query: 1576 YHSLLWPLEWTI 1611
            YH+L WPLEWT+
Sbjct: 555  YHTLFWPLEWTV 566


>ref|NP_694802.2| thioredoxin reductase 3 isoform 2 [Mus musculus].
          Length = 615

 Score =  606 bits (1562), Expect(2) = e-175
 Identities = 293/450 (65%), Positives = 356/450 (79%)
 Frame = +2

Query: 227  EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
            +DG  ++  L+E++++  VP +FV +  +GG  +T +A+Q G LQKLL+ + A      +
Sbjct: 74   DDGASVQEVLTEISNQKTVPNIFVNKVHVGGCDRTFQAHQNGLLQKLLQDDSA------H 127

Query: 407  DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
            DYDLIII                 K+VMVLDFV P+P GT WGLGGTCVNVGCIPKKLMH
Sbjct: 128  DYDLIIIGGGSGGLSCAKEAANLGKKVMVLDFVVPSPQGTTWGLGGTCVNVGCIPKKLMH 187

Query: 587  QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
            QAALLG AL+D++ YGW   + +KH+WE MTEA+Q+HIGSLNWGYRV LREK VTY N++
Sbjct: 188  QAALLGHALQDAKKYGWEYNQQVKHNWEAMTEAIQSHIGSLNWGYRVTLREKGVTYVNSF 247

Query: 767  GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 946
            G+FV  H+IKATN KG+E  Y+A KF+IATGERPRYLGI GDKEYCI+SDDLFSLPYCPG
Sbjct: 248  GEFVDLHKIKATNKKGQETFYTASKFVIATGERPRYLGIQGDKEYCITSDDLFSLPYCPG 307

Query: 947  KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
             TLVVGASYV LECAGFLAG+GLDVTVMVRS+LLRGFDQ+MA K+G ++E+ GVKF R+F
Sbjct: 308  CTLVVGASYVGLECAGFLAGLGLDVTVMVRSVLLRGFDQEMAEKVGSYLEQQGVKFQRKF 367

Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
             PI V+Q+E G+PG+L+V AK+T   ET+EG YNTVLLAIGRD+CTR IGLE +GV+INE
Sbjct: 368  TPILVQQLEKGLPGKLKVVAKSTEGPETVEGIYNTVLLAIGRDSCTRKIGLEKIGVKINE 427

Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
            K GKIPV D EQTNVP+VYAIGDIL+GKPELTP +IQAG+LLA RL+G S  + DY N+P
Sbjct: 428  KNGKIPVNDVEQTNVPHVYAIGDILDGKPELTPVAIQAGKLLARRLFGVSLEKCDYINIP 487

Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
            TTVFTPLEYG CG SEE A+E   +E  E+
Sbjct: 488  TTVFTPLEYGCCGLSEEKAIEMYKKENLEV 517



 Score = 30.0 bits (66), Expect(2) = e-175
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +1

Query: 1576 YHSLLWPLEWTI 1611
            YH+L WPLEWT+
Sbjct: 518  YHTLFWPLEWTV 529


>ref|NP_038739.2| thioredoxin reductase 2, mitochondrial precursor [Mus musculus].
          Length = 527

 Score =  411 bits (1057), Expect = e-115
 Identities = 209/395 (52%), Positives = 270/395 (68%), Gaps = 1/395 (0%)
 Frame = +2

Query: 410  YDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQ 589
            +DL++I              +  K+V V D+V P+P GT+WGLGGTCVNVGCIPKKLMHQ
Sbjct: 43   FDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQ 102

Query: 590  AALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAYG 769
            AALLG  +RD+ +YGW V + ++H+W+ M EAVQNH+ SLNWG+RV L+++KV Y N   
Sbjct: 103  AALLGGMIRDAHHYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKA 162

Query: 770  QFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRY-LGIPGDKEYCISSDDLFSLPYCPG 946
             FV  H ++  +  GK  + SAE  +IATG RPRY   + G  EY I+SDD+F L   PG
Sbjct: 163  SFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKESPG 222

Query: 947  KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
            KTLVVGASYVALECAGFL GIGLD TVM+RSI LRGFDQ M++ + EHME HG +F++  
Sbjct: 223  KTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKGC 282

Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
            VP  ++++      +L+VT +   S +   G ++TVL AIGR   TR + LE  G+  N 
Sbjct: 283  VPSHIKKLPT---NQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNP 339

Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
            K  KI V  +E T+VP++YAIGD+ EG+PELTP +I+AG+LLA RL+G S    DY NVP
Sbjct: 340  KNQKIIVDAQEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSNVP 399

Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
            TTVFTPLEYG  G SEE AV   G+E  E+   Y+
Sbjct: 400  TTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYY 434


>ref|NP_001171530.1| thioredoxin reductase 3 isoform 3 [Mus musculus].
          Length = 538

 Score =  212 bits (540), Expect(2) = 2e-57
 Identities = 106/168 (63%), Positives = 129/168 (76%), Gaps = 6/168 (3%)
 Frame = +2

Query: 1091 MEEHGVKFIRQFVP------IKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGR 1252
            + E GV ++  F        IKV+Q+E G+PG+L+V AK+T   ET+EG YNTVLLAIGR
Sbjct: 273  LREKGVTYVNSFGEFVDLHKIKVQQLEKGLPGKLKVVAKSTEGPETVEGIYNTVLLAIGR 332

Query: 1253 DACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLL 1432
            D+CTR IGLE +GV+INEK GKIPV D EQTNVP+VYAIGDIL+GKPELTP +IQAG+LL
Sbjct: 333  DSCTRKIGLEKIGVKINEKNGKIPVNDVEQTNVPHVYAIGDILDGKPELTPVAIQAGKLL 392

Query: 1433 AXRLYGGSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
            A RL+G S  + DY N+PTTVFTPLEYG CG SEE A+E   +E  E+
Sbjct: 393  ARRLFGVSLEKCDYINIPTTVFTPLEYGCCGLSEEKAIEMYKKENLEV 440



 Score = 30.0 bits (66), Expect(2) = 2e-57
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +1

Query: 1576 YHSLLWPLEWTI 1611
            YH+L WPLEWT+
Sbjct: 441  YHTLFWPLEWTV 452



 Score =  219 bits (558), Expect = 5e-57
 Identities = 104/190 (54%), Positives = 135/190 (71%)
 Frame = +2

Query: 227 EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
           +DG  ++  L+E++++  VP +FV +  +GG  +T +A+Q G LQKLL+ + A      +
Sbjct: 111 DDGASVQEVLTEISNQKTVPNIFVNKVHVGGCDRTFQAHQNGLLQKLLQDDSA------H 164

Query: 407 DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
           DYDLIII                 K+VMVLDFV P+P GT WGLGGTCVNVGCIPKKLMH
Sbjct: 165 DYDLIIIGGGSGGLSCAKEAANLGKKVMVLDFVVPSPQGTTWGLGGTCVNVGCIPKKLMH 224

Query: 587 QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
           QAALLG AL+D++ YGW   + +KH+WE MTEA+Q+HIGSLNWGYRV LREK VTY N++
Sbjct: 225 QAALLGHALQDAKKYGWEYNQQVKHNWEAMTEAIQSHIGSLNWGYRVTLREKGVTYVNSF 284

Query: 767 GQFVGPHRIK 796
           G+FV  H+IK
Sbjct: 285 GEFVDLHKIK 294


>ref|NP_001171531.1| thioredoxin reductase 3 isoform 4 [Mus musculus].
          Length = 501

 Score =  212 bits (540), Expect(2) = 2e-57
 Identities = 106/168 (63%), Positives = 129/168 (76%), Gaps = 6/168 (3%)
 Frame = +2

Query: 1091 MEEHGVKFIRQFVP------IKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGR 1252
            + E GV ++  F        IKV+Q+E G+PG+L+V AK+T   ET+EG YNTVLLAIGR
Sbjct: 236  LREKGVTYVNSFGEFVDLHKIKVQQLEKGLPGKLKVVAKSTEGPETVEGIYNTVLLAIGR 295

Query: 1253 DACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLL 1432
            D+CTR IGLE +GV+INEK GKIPV D EQTNVP+VYAIGDIL+GKPELTP +IQAG+LL
Sbjct: 296  DSCTRKIGLEKIGVKINEKNGKIPVNDVEQTNVPHVYAIGDILDGKPELTPVAIQAGKLL 355

Query: 1433 AXRLYGGSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
            A RL+G S  + DY N+PTTVFTPLEYG CG SEE A+E   +E  E+
Sbjct: 356  ARRLFGVSLEKCDYINIPTTVFTPLEYGCCGLSEEKAIEMYKKENLEV 403



 Score = 30.0 bits (66), Expect(2) = 2e-57
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +1

Query: 1576 YHSLLWPLEWTI 1611
            YH+L WPLEWT+
Sbjct: 404  YHTLFWPLEWTV 415



 Score =  219 bits (558), Expect = 5e-57
 Identities = 104/190 (54%), Positives = 135/190 (71%)
 Frame = +2

Query: 227 EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
           +DG  ++  L+E++++  VP +FV +  +GG  +T +A+Q G LQKLL+ + A      +
Sbjct: 74  DDGASVQEVLTEISNQKTVPNIFVNKVHVGGCDRTFQAHQNGLLQKLLQDDSA------H 127

Query: 407 DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
           DYDLIII                 K+VMVLDFV P+P GT WGLGGTCVNVGCIPKKLMH
Sbjct: 128 DYDLIIIGGGSGGLSCAKEAANLGKKVMVLDFVVPSPQGTTWGLGGTCVNVGCIPKKLMH 187

Query: 587 QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
           QAALLG AL+D++ YGW   + +KH+WE MTEA+Q+HIGSLNWGYRV LREK VTY N++
Sbjct: 188 QAALLGHALQDAKKYGWEYNQQVKHNWEAMTEAIQSHIGSLNWGYRVTLREKGVTYVNSF 247

Query: 767 GQFVGPHRIK 796
           G+FV  H+IK
Sbjct: 248 GEFVDLHKIK 257


>ref|NP_034474.4| glutathione reductase, mitochondrial precursor [Mus musculus].
          Length = 500

 Score =  178 bits (452), Expect = 9e-45
 Identities = 120/353 (33%), Positives = 190/353 (53%), Gaps = 6/353 (1%)
 Frame = +2

Query: 536  LGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNW 715
            LGGTCVNVGC+PKK+M   A+  + + D  +YG+   E  K  W  + +    ++  LN 
Sbjct: 76   LGGTCVNVGCVPKKVMWNTAVHSEFMHDHVDYGFQSCEG-KFSWHVIKQKRDAYVSRLNT 134

Query: 716  GYRVALREKKVTYENAYGQFV-GPHRIKATNNKGKEKIYSAEKFLIATG---ERPRYLGI 883
             Y+  L +  +   + Y  F  GP      N K     ++A   LIATG     P    I
Sbjct: 135  IYQNNLTKSHIEIIHGYATFADGPRPTVEVNGKK----FTAPHILIATGGVPTVPHESQI 190

Query: 884  PGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVR-SILLRGFD 1060
            PG     I+SD  F L   P ++++VGA Y+A+E AG L+ +G   ++M+R   +LR FD
Sbjct: 191  PG-ASLGITSDGFFQLEDLPSRSVIVGAGYIAVEIAGILSALGSKTSLMIRHDKVLRNFD 249

Query: 1061 QDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLL 1240
              +++   E +E  GV+ ++     +V++  +G+  ++  +        T+  + + +L 
Sbjct: 250  SLISSNCTEELENAGVEVLKFTQVKEVKKTSSGLELQVVTSVPGRKPTTTMIPDVDCLLW 309

Query: 1241 AIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQA 1420
            AIGRD  ++ + L  VG++ +EK G I V + + TNV  VYA+GD+  GK  LTP +I A
Sbjct: 310  AIGRDPNSKGLNLNKVGIQTDEK-GHILVDEFQNTNVKGVYAVGDVC-GKALLTPVAIAA 367

Query: 1421 GRLLAXRLYG-GSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
            GR LA RL+      + DY+N+PT VF+    G  G +E+ AV K G++  +I
Sbjct: 368  GRKLAHRLFECKQDSKLDYDNIPTVVFSHPPIGTVGLTEDEAVHKYGKDNVKI 420


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 54,346,358
Number of extensions: 1472904
Number of successful extensions: 6138
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 6076
Number of HSP's successfully gapped: 17
Length of query: 537
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 431
Effective length of database: 12,433,743
Effective search space: 5358943233
Effective search space used: 5358943233
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003094
         (1612 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_999319.2| thioredoxin reductase 1, cytoplasmic [Sus scrof...   756   0.0  
Alignment   gi|XP_003132464.2| PREDICTED: thioredoxin reductase 3 [Sus scro...   612   e-175
Alignment   gi|NP_001162173.1| thioredoxin reductase 2, mitochondrial [Sus ...   405   e-113
Alignment   gi|XP_003126713.1| PREDICTED: hypothetical protein LOC100520493...   177   1e-44
Alignment   gi|XP_003359544.1| PREDICTED: glutathione reductase, mitochondr...   172   6e-43
Alignment   gi|XP_003359549.1| PREDICTED: glutathione reductase, mitochondr...   160   2e-39
Alignment   gi|XP_003359545.1| PREDICTED: glutathione reductase, mitochondr...   151   9e-37
Alignment   gi|NP_999227.1| dihydrolipoyl dehydrogenase, mitochondrial prec...   147   2e-35
Alignment   gi|XP_003357560.1| PREDICTED: dihydrolipoyl dehydrogenase, mito...   147   2e-35
Alignment   gi|XP_003359546.1| PREDICTED: glutathione reductase, mitochondr...   136   4e-32

>ref|NP_999319.2| thioredoxin reductase 1, cytoplasmic [Sus scrofa].
          Length = 499

 Score =  756 bits (1951), Expect = 0.0
 Identities = 376/406 (92%), Positives = 378/406 (93%)
 Frame = +2

Query: 374  MNGAEELPEMYDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCV 553
            MNGAEELPEMYDYDLIII              RFNKRVMVLDFVTPTPLGTRWGLGGTCV
Sbjct: 1    MNGAEELPEMYDYDLIIIGGGSGGLAAAKEAARFNKRVMVLDFVTPTPLGTRWGLGGTCV 60

Query: 554  NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL 733
            NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL
Sbjct: 61   NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL 120

Query: 734  REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS 913
            REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS
Sbjct: 121  REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS 180

Query: 914  DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 1093
            DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM
Sbjct: 181  DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 240

Query: 1094 EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI 1273
            EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI
Sbjct: 241  EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI 300

Query: 1274 GLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGG 1453
            GLETVGVEINEKTGKIPVTDEEQTNVPYVY IGDILEGKPELTP +IQAGRLLA RLYGG
Sbjct: 301  GLETVGVEINEKTGKIPVTDEEQTNVPYVYTIGDILEGKPELTPVAIQAGRLLAQRLYGG 360

Query: 1454 SHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
            S  + DYENVPTTVFTPLEYGACG SEE AVEK GEE  EI   YF
Sbjct: 361  STVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEIYHSYF 406


>ref|XP_003132464.2| PREDICTED: thioredoxin reductase 3 [Sus scrofa].
          Length = 669

 Score =  612 bits (1577), Expect = e-175
 Identities = 295/455 (64%), Positives = 361/455 (79%)
 Frame = +2

Query: 227  EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
            ++G  ++  LSELT++  VP +FV +  +GG  +T +A+Q G LQKLL+ + A      Y
Sbjct: 162  DNGASVQEVLSELTNQRTVPNIFVNKVHMGGCDRTFQAHQSGLLQKLLQDDPA------Y 215

Query: 407  DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
            DYDLI+I                 ++V+VLDFV P+P GT WGLGGTCVNVGCIPKKLMH
Sbjct: 216  DYDLIVIGGGSGGLACAQEAAILGRKVLVLDFVVPSPQGTSWGLGGTCVNVGCIPKKLMH 275

Query: 587  QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
            QAALLGQAL DSR +GW   + +KH+W  MTEAVQNHIGSLNWGYR++LREK V Y N+Y
Sbjct: 276  QAALLGQALTDSRKFGWEYSQQVKHNWGTMTEAVQNHIGSLNWGYRLSLREKAVAYINSY 335

Query: 767  GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 946
            G+FV  H+IKATN KG+E  Y+A KF+IATGERPRYLGI GDKEYCI+SDDLFSLPYCPG
Sbjct: 336  GEFVEHHKIKATNGKGQETCYTAAKFVIATGERPRYLGIQGDKEYCITSDDLFSLPYCPG 395

Query: 947  KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
             TLVVGASYVALECAGFLAG+GLDVTVMVRS+LLRGFDQ+MA ++G +ME+HGV+F+R+F
Sbjct: 396  TTLVVGASYVALECAGFLAGLGLDVTVMVRSVLLRGFDQEMAERVGSYMEQHGVRFLRKF 455

Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
            VP++V+Q+E G PG+L+V AK+T   ETIEG YNTVLLAIGRD+CT+ +GLE +GV+INE
Sbjct: 456  VPVEVQQLEKGSPGKLKVMAKSTEGPETIEGVYNTVLLAIGRDSCTKKMGLEKIGVKINE 515

Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
            K+GKIPV D EQTNVPYVYA+GD+LEGKPELTP ++QAG+LLA RL+GG   + DY NVP
Sbjct: 516  KSGKIPVNDVEQTNVPYVYAVGDVLEGKPELTPIAVQAGKLLARRLFGGRLEKCDYVNVP 575

Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
            T VFTPLEYG CG SEE A+E   +E  E  ++ F
Sbjct: 576  TVVFTPLEYGCCGYSEERAIEVYQKENLEDRVIGF 610


>ref|NP_001162173.1| thioredoxin reductase 2, mitochondrial [Sus scrofa].
          Length = 513

 Score =  405 bits (1040), Expect = e-113
 Identities = 210/395 (53%), Positives = 266/395 (67%), Gaps = 1/395 (0%)
 Frame = +2

Query: 410  YDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQ 589
            YDL++I              +  K+V V+D+V+P+P GTRWGLGGTCVNVGCIPKKLMHQ
Sbjct: 31   YDLLVIGGGSGGLACAKEAAQLGKKVAVVDYVSPSPRGTRWGLGGTCVNVGCIPKKLMHQ 90

Query: 590  AALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAYG 769
            AALLG  +RD+ +YGW V +   H W +M EAVQNH+ SLNWG+RV L+++KV Y N   
Sbjct: 91   AALLGGVIRDAPHYGWEVVQPALHSWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNFKA 150

Query: 770  QFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRY-LGIPGDKEYCISSDDLFSLPYCPG 946
             FV  H +   +  GKE + SAE  +IATG RPRY   I G  EY I+SDD+F L   PG
Sbjct: 151  SFVNKHTVCGVSKGGKEILLSAEHIVIATGGRPRYPAHIEGAVEYGITSDDIFWLKESPG 210

Query: 947  KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
            KTLVVGASYVALECAGFL G+GLD T+M+RSI LR FDQ MA+ + EHM  HG + ++  
Sbjct: 211  KTLVVGASYVALECAGFLTGLGLDATIMIRSIPLRAFDQQMASLVIEHMAVHGTRILKGC 270

Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
            +P++VE++     G+L+VT     SD    G ++TVL A GR     ++ LE  GV  N 
Sbjct: 271  MPLRVEKLP---DGQLQVTWVDLASDRKDVGTFDTVLWATGRVPEIGSLNLEKAGVHTNP 327

Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
             T KI V  ++ T+VP++YAIGD+ EG+PELTP ++ AGRLLA RL G S    DY+NVP
Sbjct: 328  HTQKILVDAQDATSVPHIYAIGDVAEGRPELTPTAVMAGRLLAQRLCGRSSDLMDYDNVP 387

Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
            TTVFTPLEYG  G SEE AV + GEE  E+   Y+
Sbjct: 388  TTVFTPLEYGCVGLSEEAAVARHGEEGVEVYHAYY 422


>ref|XP_003126713.1| PREDICTED: hypothetical protein LOC100520493 [Sus scrofa].
          Length = 121

 Score =  177 bits (449), Expect = 1e-44
 Identities = 85/112 (75%), Positives = 89/112 (79%), Gaps = 2/112 (1%)
 Frame = +1

Query: 31  LWEPASLSLQ--SSPVPHCIXXXXXXXXXXXXCCPTARVRVSFGLTKNGGSPGPPGCENP 204
           LW+   + ++  SSPVPHCI            CCPTARVRVSFGLTKNGGSPGPPGCENP
Sbjct: 9   LWDHRVVVIECLSSPVPHCIGSRGGGARQRGACCPTARVRVSFGLTKNGGSPGPPGCENP 68

Query: 205 GPRASACRGRAGPRESALRTDLGNRRARCVCEAAKDRRPWSNPEGLSGGQTS 360
           GPRASACRGRAGPRESALRTDLGNRRARCVCEAAKDRRPWSNPEG     TS
Sbjct: 69  GPRASACRGRAGPRESALRTDLGNRRARCVCEAAKDRRPWSNPEGRWASFTS 120


>ref|XP_003359544.1| PREDICTED: glutathione reductase, mitochondrial-like isoform 1 [Sus
            scrofa].
          Length = 519

 Score =  172 bits (435), Expect = 6e-43
 Identities = 124/361 (34%), Positives = 194/361 (53%), Gaps = 14/361 (3%)
 Frame = +2

Query: 536  LGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNW 715
            LGGTCVNVGC+PKK+M   A+  + + D  +YG+   E+ K +W  + E    ++  LN 
Sbjct: 95   LGGTCVNVGCVPKKVMWNTAVHSEFMHDHVDYGFQSCES-KFNWRVIKEKRDAYVSRLNT 153

Query: 716  GYRVALREKKVTYENAYGQFVG-PHRIKATNNKGKEKIYSAEKFLIATG---ERPRYLGI 883
             Y+  L +  +   + +  F   P      N K     Y+A   LIATG     P    I
Sbjct: 154  IYQNNLTKSHIEIIHGHAAFTSDPQPTVEVNGKK----YTAPHILIATGGVPSVPPESQI 209

Query: 884  PGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVR-SILLRGFD 1060
            PG     I+SD  F L   P ++++VGA Y+A+E AG L+ +G   ++M+R   +LR FD
Sbjct: 210  PG-ASLGITSDGFFQLEELPSRSVIVGAGYIAVEIAGILSALGSKTSLMIRHDKVLRSFD 268

Query: 1061 QDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGM--------PGRLRVTAKATNSDETIE 1216
              +++   E +E  G++ ++     +V++  +G+        PGR     K T S  TI 
Sbjct: 269  SIISSNCTEELENAGIEVLKYSQVKEVKKTSSGLELCMVTSVPGR-----KPTFS--TIS 321

Query: 1217 GEYNTVLLAIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPE 1396
            G  + +L AIGRD  +R + L  +G++ ++K G I V + + TNV  +YA+GD+  G+  
Sbjct: 322  G-VDCLLWAIGRDPNSRGLNLSQLGIQTDDK-GHIIVDEFQNTNVKGIYAVGDVC-GRAL 378

Query: 1397 LTPGSIQAGRLLAXRLYG-GSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYE 1573
            LTP +I AGR LA RL+      + DY+N+PT VF+    G  G +E+ A+ K G+E  +
Sbjct: 379  LTPVAIAAGRKLAHRLFECKEDSKLDYDNIPTVVFSHPPIGTVGLTEDEAICKYGKENVK 438

Query: 1574 I 1576
            I
Sbjct: 439  I 439


>ref|XP_003359549.1| PREDICTED: glutathione reductase, mitochondrial [Sus scrofa].
          Length = 524

 Score =  160 bits (405), Expect = 2e-39
 Identities = 118/355 (33%), Positives = 189/355 (53%), Gaps = 13/355 (3%)
 Frame = +2

Query: 551  VNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVA 730
            VNVGC+PKK+M   A+  + + D  +YG+   E+ K +W  + E    ++  LN  Y+  
Sbjct: 105  VNVGCVPKKVMWNTAVHSEFMHDHVDYGFQSCES-KFNWRVIKEKRDAYVSRLNTIYQNN 163

Query: 731  LREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRY---LGIPGDKEY 901
            L +  +   + +  F    +     N  K   Y+A   LIATG  P       IPG    
Sbjct: 164  LTKSHIEIIHGHAAFTSDPQPTVEVNGKK---YTAPHILIATGGVPSVPPESQIPG-ASL 219

Query: 902  CISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVR-SILLRGFDQDMANK 1078
             I+SD  F L   P ++++VGA Y+A+E AG L+ +G   ++M+R   +LR FD  +++ 
Sbjct: 220  GITSDGFFQLEELPSRSVIVGAGYIAVEIAGILSALGSKTSLMIRHDKVLRSFDSIISSN 279

Query: 1079 IGEHMEEHGVKFIRQFVPIKVEQIEAGM--------PGRLRVTAKATNSDETIEGEYNTV 1234
              E +E  G++ ++     +V++  +G+        PGR     K T S  TI G  + +
Sbjct: 280  CTEELENAGIEVLKYSQVKEVKKTSSGLELCMVTSVPGR-----KPTFS--TISG-VDCL 331

Query: 1235 LLAIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSI 1414
            L AIGRD  +R + L  +G++ ++K G I V + + TNV  +YA+GD+  G+  LTP +I
Sbjct: 332  LWAIGRDPNSRGLNLSQLGIQTDDK-GHIIVDEFQNTNVKGIYAVGDVC-GRALLTPVAI 389

Query: 1415 QAGRLLAXRLYG-GSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
             AGR LA RL+      + DY+N+PT VF+    G  G +E+ A+ K G+E  +I
Sbjct: 390  AAGRKLAHRLFECKEDSKLDYDNIPTVVFSHPPIGTVGLTEDEAICKYGKENVKI 444


>ref|XP_003359545.1| PREDICTED: glutathione reductase, mitochondrial-like isoform 2 [Sus
            scrofa].
          Length = 490

 Score =  151 bits (382), Expect = 9e-37
 Identities = 116/351 (33%), Positives = 180/351 (51%), Gaps = 4/351 (1%)
 Frame = +2

Query: 536  LGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNW 715
            LGGTCVNVGC+PKK+M   A+  + + D  +YG+   E+ K +W  + E    ++  LN 
Sbjct: 95   LGGTCVNVGCVPKKVMWNTAVHSEFMHDHVDYGFQSCES-KFNWRVIKEKRDAYVSRLNT 153

Query: 716  GYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRY---LGIP 886
             Y+  L +  +   + +  F    +     N  K   Y+A   LIATG  P       IP
Sbjct: 154  IYQNNLTKSHIEIIHGHAAFTSDPQPTVEVNGKK---YTAPHILIATGGVPSVPPESQIP 210

Query: 887  GDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQD 1066
            G     I+SD  F L   P ++++VGA Y+A+E AG L+ +G   ++M+R         D
Sbjct: 211  G-ASLGITSDGFFQLEELPSRSVIVGAGYIAVEIAGILSALGSKTSLMIR--------HD 261

Query: 1067 MANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAI 1246
               ++ +     G++            +   +PGR     K T S  TI G  + +L AI
Sbjct: 262  KVKEVKK--TSSGLELC----------MVTSVPGR-----KPTFS--TISG-VDCLLWAI 301

Query: 1247 GRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGR 1426
            GRD  +R + L  +G++ ++K G I V + + TNV  +YA+GD+  G+  LTP +I AGR
Sbjct: 302  GRDPNSRGLNLSQLGIQTDDK-GHIIVDEFQNTNVKGIYAVGDVC-GRALLTPVAIAAGR 359

Query: 1427 LLAXRLYGGSH-CQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
             LA RL+      + DY+N+PT VF+    G  G +E+ A+ K G+E  +I
Sbjct: 360  KLAHRLFECKEDSKLDYDNIPTVVFSHPPIGTVGLTEDEAICKYGKENVKI 410


>ref|NP_999227.1| dihydrolipoyl dehydrogenase, mitochondrial precursor [Sus scrofa].
          Length = 509

 Score =  147 bits (371), Expect = 2e-35
 Identities = 105/344 (30%), Positives = 175/344 (50%), Gaps = 5/344 (1%)
 Frame = +2

Query: 536  LGGTCVNVGCIPKK-LMHQAALLGQAL-RDSRNYGWNVEETIKHDWERMTEAVQNHIGSL 709
            LGGTC+NVGCIP K L++ +     A  +D  + G  + E ++ + E+M E   N + +L
Sbjct: 76   LGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSE-VRLNLEKMMEQKSNAVKAL 134

Query: 710  NWGYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATG-ERPRYLGIP 886
              G     ++ KV   N YG+  G +++ AT   G  ++ + +  LIATG E   + GI 
Sbjct: 135  TGGIAHLFKQNKVVRVNGYGKITGKNQVTATKADGSTEVINTKNILIATGSEVTPFPGIT 194

Query: 887  GDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTV--MVRSILLRGFD 1060
             D++  +SS    SL   P K +V+GA  + +E       +G DVT   ++  +   G D
Sbjct: 195  IDEDTVVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVELLGHVGGIGID 254

Query: 1061 QDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLL 1240
             +++      +++ G KF    +  KV        G + V+ +A +  +      + +L+
Sbjct: 255  MEVSKNFQRILQKQGFKF---KLNTKVIGATKKSDGNIDVSIEAASGGKAEVITCDVLLV 311

Query: 1241 AIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQA 1420
             IGR   T+N+GLE +G+E++ + G+IPV    QT +P +YAIGD++ G P L   +   
Sbjct: 312  CIGRRPFTQNLGLEELGIELDPR-GRIPVNTRFQTKIPNIYAIGDVVAG-PMLAHKAEDE 369

Query: 1421 GRLLAXRLYGGSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEK 1552
            G +    + GG+    DY  VP+ ++T  E    G SEE   E+
Sbjct: 370  GIICVEGMAGGA-VHIDYNCVPSVIYTHPEVAWVGKSEEQLKEE 412


>ref|XP_003357560.1| PREDICTED: dihydrolipoyl dehydrogenase, mitochondrial-like [Sus
            scrofa].
          Length = 509

 Score =  147 bits (370), Expect = 2e-35
 Identities = 105/344 (30%), Positives = 175/344 (50%), Gaps = 5/344 (1%)
 Frame = +2

Query: 536  LGGTCVNVGCIPKK-LMHQAALLGQAL-RDSRNYGWNVEETIKHDWERMTEAVQNHIGSL 709
            LGGTC+NVGCIP K L++ +     A  +D  + G  + E ++ + E+M E   N + +L
Sbjct: 76   LGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSE-VRLNLEKMMEQKSNAVKAL 134

Query: 710  NWGYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATG-ERPRYLGIP 886
              G     ++ KV   N YG+  G +++ AT   G  ++ + +  LIATG E   + GI 
Sbjct: 135  TGGIAHLFKQNKVVRVNGYGKITGKNQVTATKADGSTEVINTKNILIATGSEVTPFPGIT 194

Query: 887  GDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM--VRSILLRGFD 1060
             D++  +SS    SL   P K +V+GA  + +E       +G DVT +  +  +   G D
Sbjct: 195  IDEDTVVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGIGID 254

Query: 1061 QDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLL 1240
             +++      +++ G KF    +  KV        G + V+ +A +  +      + +L+
Sbjct: 255  MEVSKNFQRILQKQGFKF---KLNTKVIGATKKSDGNIDVSIEAASGGKAEVITCDVLLV 311

Query: 1241 AIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQA 1420
             IGR   T+N+GLE +G+E++ + G+IPV    QT +P +YAIGD++ G P L   +   
Sbjct: 312  CIGRRPFTQNLGLEELGIELDPR-GRIPVNTRFQTKIPNIYAIGDVVAG-PMLAHKAEDE 369

Query: 1421 GRLLAXRLYGGSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEK 1552
            G +    + GG+    DY  VP+ ++T  E    G SEE   E+
Sbjct: 370  GIICVEGMAGGA-VHIDYNCVPSVIYTHPEVAWVGKSEEQLKEE 412


>ref|XP_003359546.1| PREDICTED: glutathione reductase, mitochondrial-like isoform 3 [Sus
            scrofa].
          Length = 466

 Score =  136 bits (342), Expect = 4e-32
 Identities = 105/353 (29%), Positives = 165/353 (46%), Gaps = 6/353 (1%)
 Frame = +2

Query: 536  LGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNW 715
            LGGTCVNVGC+PKK+M   A+  + + D  +YG+   E+ K +W  + E    ++  LN 
Sbjct: 95   LGGTCVNVGCVPKKVMWNTAVHSEFMHDHVDYGFQSCES-KFNWRVIKEKRDAYVSRLNT 153

Query: 716  GYRVALREKKVTYENAYGQFVG-PHRIKATNNKGKEKIYSAEKFLIATG---ERPRYLGI 883
             Y+  L +  +   + +  F   P      N K     Y+A   LIATG     P    I
Sbjct: 154  IYQNNLTKSHIEIIHGHAAFTSDPQPTVEVNGKK----YTAPHILIATGGVPSVPPESQI 209

Query: 884  PGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVR-SILLRGFD 1060
            PG     I+SD  F L   P ++++VGA Y+A+E AG L+ +G   ++M+R   +LR FD
Sbjct: 210  PG-ASLGITSDGFFQLEELPSRSVIVGAGYIAVEIAGILSALGSKTSLMIRHDKVLRSFD 268

Query: 1061 QDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLL 1240
              +++   E +E  G++ ++                                        
Sbjct: 269  SIISSNCTEELENAGIEVLKY--------------------------------------- 289

Query: 1241 AIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQA 1420
                     + G++T      +  G I V + + TNV  +YA+GD+  G+  LTP +I A
Sbjct: 290  ---------SQGIQT------DDKGHIIVDEFQNTNVKGIYAVGDVC-GRALLTPVAIAA 333

Query: 1421 GRLLAXRLYG-GSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
            GR LA RL+      + DY+N+PT VF+    G  G +E+ A+ K G+E  +I
Sbjct: 334  GRKLAHRLFECKEDSKLDYDNIPTVVFSHPPIGTVGLTEDEAICKYGKENVKI 386


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 40,300,271
Number of extensions: 1111825
Number of successful extensions: 5300
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 5232
Number of HSP's successfully gapped: 13
Length of query: 537
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 433
Effective length of database: 8,754,644
Effective search space: 3790760852
Effective search space used: 3790760852
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-003094
         (1612 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr05                                                         450   e-123
Sscrofa_Chr13                                                          72   1e-09

>Sscrofa_Chr05 
||          Length = 111506441

 Score =  450 bits (227), Expect = e-123
 Identities = 227/227 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1        cattcaggggagggcgtggcttctccgagcctctgggaaccggcctccctttcccttcag 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83804505 cattcaggggagggcgtggcttctccgagcctctgggaaccggcctccctttcccttcag 83804446

                                                                            
Query: 61       tcgtctccggtcccgcattgcatcggatcgcgaggtggtggggcgcgtcagagaggcgcc 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83804445 tcgtctccggtcccgcattgcatcggatcgcgaggtggtggggcgcgtcagagaggcgcc 83804386

                                                                            
Query: 121      tgctgcccaacagctcgcgttcgtgtaagcttcgggctcaccaaaaacggaggaagcccc 180
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83804385 tgctgcccaacagctcgcgttcgtgtaagcttcgggctcaccaaaaacggaggaagcccc 83804326

                                                               
Query: 181      gggcctcccggctgcgagaaccccgggccgagagcatccgcctgccg 227
                |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83804325 gggcctcccggctgcgagaaccccgggccgagagcatccgcctgccg 83804279



 Score =  412 bits (208), Expect = e-112
 Identities = 222/224 (99%), Gaps = 2/224 (0%)
 Strand = Plus / Plus

                                                                            
Query: 910      cagtgatgatcttttctctttaccttattgcccgggtaagaccctggtggtcggagcatc 969
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83671705 cagtgatgatcttttctctttaccttattgcccgggtaagaccctggtggtcggagcatc 83671764

                                                                            
Query: 970      ctatgtcgctttggaatgtgctggatttcttgccggcatcggtttagatgtcactgttat 1029
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83671765 ctatgtcgctttggaatgtgctggatttcttgccggcatcggtttagatgtcactgttat 83671824

                                                                            
Query: 1030     ggtacggtccattctcctgagaggatttgaccaggacatggccaacaaaatcggtgaaca 1089
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83671825 ggtacggtccattctcctgagaggatttgaccaggacatggccaacaaaatcggtgaaca 83671884

                                                            
Query: 1090     tatggaagaacac-ggtgtcaagtttataagacagtttgtacca 1132
                ||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 83671885 tatggaagaacacgggtgtc-agtttataagacagtttgtacca 83671927



 Score =  285 bits (144), Expect = 4e-74
 Identities = 144/144 (100%)
 Strand = Plus / Plus

                                                                            
Query: 654      ttaaacacgactgggaaagaatgacagaagctgtgcagaatcacattggctctctgaact 713
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83669775 ttaaacacgactgggaaagaatgacagaagctgtgcagaatcacattggctctctgaact 83669834

                                                                            
Query: 714      ggggctaccgcgtggctctgcgggagaaaaaagtcacttatgagaatgcctatgggcagt 773
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83669835 ggggctaccgcgtggctctgcgggagaaaaaagtcacttatgagaatgcctatgggcagt 83669894

                                        
Query: 774      ttgttgggcctcacagaattaagg 797
                ||||||||||||||||||||||||
Sbjct: 83669895 ttgttgggcctcacagaattaagg 83669918



 Score =  258 bits (130), Expect = 8e-66
 Identities = 146/149 (97%), Gaps = 2/149 (1%)
 Strand = Plus / Plus

                                                                            
Query: 1309     gactggaaaaatacctgtgacggatgaagagcagactaatgtgccttatgtctatgccat 1368
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83677513 gactggaaaaatacctgtgacggatgaagagcagactaatgtgccttatgtctatgccat 83677572

                                                                            
Query: 1369     tggtgatatattggaggggaagccagagctcacccccggtagc-atccaggcaggaaggt 1427
                |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 83677573 tggtgatatattggaggggaagccagagctca-ccccggtagcaatccaggcaggaaggt 83677631

                                             
Query: 1428     tgctggcacanaggctgtatggtggctcc 1456
                |||||||||| ||||||||||||||||||
Sbjct: 83677632 tgctggcacagaggctgtatggtggctcc 83677660



 Score =  250 bits (126), Expect = 2e-63
 Identities = 126/126 (100%)
 Strand = Plus / Plus

                                                                            
Query: 336      aggcttatcaggagggcagacttcaaaagctactgaaaatgaatggtgctgaggagcttc 395
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83657826 aggcttatcaggagggcagacttcaaaagctactgaaaatgaatggtgctgaggagcttc 83657885

                                                                            
Query: 396      ccgagatgtatgactatgacctcatcatcattggagggggctcaggaggcctggcggctg 455
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83657886 ccgagatgtatgactatgacctcatcatcattggagggggctcaggaggcctggcggctg 83657945

                      
Query: 456      ctaagg 461
                ||||||
Sbjct: 83657946 ctaagg 83657951



 Score =  240 bits (121), Expect = 2e-60
 Identities = 121/121 (100%)
 Strand = Plus / Plus

                                                                            
Query: 533      ggtctcggaggaacgtgtgtgaatgtaggttgcatacctaaaaaactgatgcaccaagca 592
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83661957 ggtctcggaggaacgtgtgtgaatgtaggttgcatacctaaaaaactgatgcaccaagca 83662016

                                                                            
Query: 593      gctttgttaggacaagccctacgagactctcgaaactatgggtggaacgtcgaggagacg 652
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83662017 gctttgttaggacaagccctacgagactctcgaaactatgggtggaacgtcgaggagacg 83662076

                 
Query: 653      a 653
                |
Sbjct: 83662077 a 83662077



 Score =  234 bits (118), Expect = 1e-58
 Identities = 118/118 (100%)
 Strand = Plus / Plus

                                                                            
Query: 795      aggcaacaaataacaaaggcaaagaaaaaatttattcagcagagaaatttctcattgcca 854
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83670302 aggcaacaaataacaaaggcaaagaaaaaatttattcagcagagaaatttctcattgcca 83670361

                                                                          
Query: 855      ctggtgaaaggccacgctatttgggtatccctggtgacaaagagtactgcatcagcag 912
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83670362 ctggtgaaaggccacgctatttgggtatccctggtgacaaagagtactgcatcagcag 83670419



 Score =  222 bits (112), Expect = 5e-55
 Identities = 112/112 (100%)
 Strand = Plus / Minus

                                                                            
Query: 227      gaggacgggcggggcctcgagagagcgctctccgaactgacctcggaaaccgacgtgccc 286
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83802906 gaggacgggcggggcctcgagagagcgctctccgaactgacctcggaaaccgacgtgccc 83802847

                                                                    
Query: 287      gttgtgtttgtgaagcggcgaaagataggcggccatggtcaaaccctgaagg 338
                ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83802846 gttgtgtttgtgaagcggcgaaagataggcggccatggtcaaaccctgaagg 83802795



 Score =  190 bits (96), Expect = 2e-45
 Identities = 96/96 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1139     gttgaacaaatcgaagcagggatgccaggccgactcagggtgacagctaaggccactaac 1198
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83674489 gttgaacaaatcgaagcagggatgccaggccgactcagggtgacagctaaggccactaac 83674548

                                                    
Query: 1199     agtgacgaaaccatcgaaggagagtataatacggta 1234
                ||||||||||||||||||||||||||||||||||||
Sbjct: 83674549 agtgacgaaaccatcgaaggagagtataatacggta 83674584



 Score =  165 bits (83), Expect = 9e-38
 Identities = 98/104 (94%)
 Strand = Plus / Plus

                                                                            
Query: 1463     cagtatgactatgaaaacgttccaacgaccgtttttactcctttggaatatggtgcttgt 1522
                |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83684739 cagtgtgactatgaaaacgttccaacgaccgtttttactcctttggaatatggtgcttgt 83684798

                                                            
Query: 1523     ggtncttccgaagagnangctgtggagaaattgggggaagaaaa 1566
                |||  |||||||||| | |||||||||||||| |||||||||||
Sbjct: 83684799 ggtctttccgaagagaaggctgtggagaaatttggggaagaaaa 83684842



 Score =  153 bits (77), Expect = 4e-34
 Identities = 77/77 (100%)
 Strand = Plus / Plus

                                                                            
Query: 459      aggaagcagccagatttaacaagcgggtcatggtcctggattttgtcactccaacccctc 518
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83659442 aggaagcagccagatttaacaagcgggtcatggtcctggattttgtcactccaacccctc 83659501

                                 
Query: 519      tcggaactagatggggt 535
                |||||||||||||||||
Sbjct: 83659502 tcggaactagatggggt 83659518



 Score =  149 bits (75), Expect = 6e-33
 Identities = 78/79 (98%)
 Strand = Plus / Plus

                                                                            
Query: 1231     ggtattgctggcaataggaagagatgcttgcacaaggaacattggcttagaaactgtggg 1290
                |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 83675161 ggtattgctggcaataggaagagatgcttgcacaagaaacattggcttagaaactgtggg 83675220

                                   
Query: 1291     ggtagagataaacgaaaag 1309
                |||||||||||||||||||
Sbjct: 83675221 ggtagagataaacgaaaag 83675239


>Sscrofa_Chr13 
||          Length = 218635234

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                            
Query: 674      atgacagaagctgtgcagaatcacattggctctctgaactggggctaccgcgtggctctg 733
                |||||||| || || ||||| ||||||||||| |||||||||||||||||  || |||||
Sbjct: 80693865 atgacagaggccgtccagaaccacattggctccctgaactggggctaccggctgtctctg 80693806

                        
Query: 734      cgggagaa 741
                ||||||||
Sbjct: 80693805 cgggagaa 80693798


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 43,389,845
Number of extensions: 281
Number of successful extensions: 281
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 279
Number of HSP's successfully gapped: 13
Length of query: 1612
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1590
Effective length of database: 2,808,408,574
Effective search space: 4465369632660
Effective search space used: 4465369632660
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)