Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003094
(1612 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_777050.1| thioredoxin reductase 1, cytoplasmic [Bos tauru... 719 0.0
Alignment gi|XP_002697197.1| PREDICTED: thioredoxin reductase 3 [Bos taur... 600 e-173
Alignment gi|NP_777051.1| thioredoxin reductase 2, mitochondrial precurso... 401 e-112
Alignment gi|NP_001107662.1| glutathione reductase, mitochondrial [Bos ta... 174 2e-43
Alignment gi|NP_001193099.1| dihydrolipoyl dehydrogenase, mitochondrial [... 149 7e-36
Alignment gi|XP_002686825.1| PREDICTED: dihydrolipoamide dehydrogenase [B... 149 7e-36
>ref|NP_777050.1| thioredoxin reductase 1, cytoplasmic [Bos taurus].
Length = 499
Score = 719 bits (1856), Expect = 0.0
Identities = 351/406 (86%), Positives = 373/406 (91%)
Frame = +2
Query: 374 MNGAEELPEMYDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCV 553
MNG+++LPE YDYDLIII +++K+VMVLDFVTPTPLGTRWGLGGTCV
Sbjct: 1 MNGSKDLPEPYDYDLIIIGGGSGGLAAAKEAAKYDKKVMVLDFVTPTPLGTRWGLGGTCV 60
Query: 554 NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL 733
NVGCIPKKLMHQAALLGQALRDSRNYGWNVEET+KHDWERMTEAVQNHIGSLNWGYRVAL
Sbjct: 61 NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETVKHDWERMTEAVQNHIGSLNWGYRVAL 120
Query: 734 REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS 913
REKKVTYENAYG+FVGPHRIKATNNKGKEKIYSAE+FLIATGERPRYLGIPGDKEYCISS
Sbjct: 121 REKKVTYENAYGEFVGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISS 180
Query: 914 DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 1093
DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM
Sbjct: 181 DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 240
Query: 1094 EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI 1273
+EHG+KFIRQFVPIKVEQIEAG PGRLRV AK+T+SD+TIEGEYNTVLLAIGRDACTR I
Sbjct: 241 QEHGIKFIRQFVPIKVEQIEAGTPGRLRVIAKSTDSDQTIEGEYNTVLLAIGRDACTRKI 300
Query: 1274 GLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGG 1453
GLE VGV+INEKTGKIPVT+EEQTNVPY+YAIGDILEGK ELTP +IQAGRLLA RLYGG
Sbjct: 301 GLENVGVKINEKTGKIPVTEEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGG 360
Query: 1454 SHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
S + DYENVPTTVFTPLEYG+CG SEE AVEK GEE E+ YF
Sbjct: 361 STVKCDYENVPTTVFTPLEYGSCGLSEEKAVEKFGEENVEVYHSYF 406
>ref|XP_002697197.1| PREDICTED: thioredoxin reductase 3 [Bos taurus].
Length = 790
Score = 600 bits (1547), Expect(2) = e-173
Identities = 287/450 (63%), Positives = 356/450 (79%)
Frame = +2
Query: 227 EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
++G ++ ALSE+TS+ VP VFV R +GG T +A+Q G LQ+LL+ + A Y
Sbjct: 251 DEGASVQEALSEITSQRTVPSVFVNRVHVGGCDHTFQAHQSGLLQQLLQQDPA------Y 304
Query: 407 DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
DYDLI+I ++VMVLDFV P+P GT WGLGGTCVNVGCIPKKLMH
Sbjct: 305 DYDLIVIGGGSGGLSCAQEAAVLGRKVMVLDFVVPSPRGTAWGLGGTCVNVGCIPKKLMH 364
Query: 587 QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
QAALLGQAL DSR +GW + ++H W MTEA+Q+HIGSL+WG+R+ALREK VTY N++
Sbjct: 365 QAALLGQALTDSRKFGWEYSQQVRHSWATMTEAIQSHIGSLSWGHRLALREKAVTYVNSF 424
Query: 767 GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 946
G+FV H++KATN KG+E +Y+A KF+IATGERPRYLGIPGD+EYCI+SDDLFSLPYCPG
Sbjct: 425 GEFVEHHKVKATNEKGQEVLYTAAKFVIATGERPRYLGIPGDREYCITSDDLFSLPYCPG 484
Query: 947 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
TLVVGASYVALECAGFLAG+GL+VTVMVRS+LLRGFDQ+MA K+G M++ GV+F+R+F
Sbjct: 485 ATLVVGASYVALECAGFLAGLGLEVTVMVRSVLLRGFDQEMAEKVGASMQQLGVRFLRKF 544
Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
VP++V+Q+E G+PGRL+V AK+T ETIEG YNTVLLAIGRD+CT+ +GLE +GV ++E
Sbjct: 545 VPVEVQQLERGLPGRLKVVAKSTEGTETIEGIYNTVLLAIGRDSCTKKLGLEKIGVNVSE 604
Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
KTGKIPV DEEQT+V YVYA+GD+LEGKP+LTP ++QAG+LLA RL+GG + DY NVP
Sbjct: 605 KTGKIPVNDEEQTSVSYVYAVGDVLEGKPQLTPVAVQAGKLLARRLFGGRSEKCDYVNVP 664
Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
T VFTPLEYG CG SEE A E E +
Sbjct: 665 TVVFTPLEYGCCGYSEEKAGEVYQAENLNV 694
Score = 30.0 bits (66), Expect(2) = e-173
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 1576 YHSLLWPLEWTI 1611
YH+L WPLEWT+
Sbjct: 695 YHTLFWPLEWTV 706
>ref|NP_777051.1| thioredoxin reductase 2, mitochondrial precursor [Bos taurus].
Length = 511
Score = 401 bits (1031), Expect = e-112
Identities = 213/396 (53%), Positives = 264/396 (66%), Gaps = 2/396 (0%)
Frame = +2
Query: 410 YDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQ 589
YDL++I + K+V VLD+V P+P GTRWGLGGTCVNVGCIPKKLMHQ
Sbjct: 28 YDLLVIGGGSGGLACAKEAAQLGKKVAVLDYVEPSPQGTRWGLGGTCVNVGCIPKKLMHQ 87
Query: 590 AALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAYG 769
AALLG +RD+ +YGW V + H W + +AVQNH+ SLNWG+R+ L+++KV Y N
Sbjct: 88 AALLGGMIRDAPHYGWGVAQA-PHSWATLADAVQNHVKSLNWGHRIQLQDRKVKYFNVKA 146
Query: 770 QFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRY-LGIPGDKEYCISSDDLFSLPYCPG 946
FV H + + G+E + SAE +IATG RPRY I G EY I+SDDLF L PG
Sbjct: 147 SFVDTHTVCGVSKGGEETLLSAEHIVIATGGRPRYPTHIEGALEYGITSDDLFWLKESPG 206
Query: 947 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
KTLVVGASYVALECAG L G+GLD TVM+RS+ LR FDQ MA+ + EHM HG + +R
Sbjct: 207 KTLVVGASYVALECAGLLTGLGLDTTVMIRSVPLRAFDQQMASLVTEHMAGHGTRILRGC 266
Query: 1127 VPIKVEQIEAGMPGR-LRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEIN 1303
P KVE++ PG+ LRVT SD G ++TVL AIGR T ++ LE GV N
Sbjct: 267 APEKVEKL----PGQQLRVTWVDLTSDRKDAGTFDTVLWAIGRVPETASLNLEKAGVHTN 322
Query: 1304 EKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENV 1483
TGKI V +E T+VP++YAIGD+ EG+PELTP +I AGRLLA RL G + DY +V
Sbjct: 323 PVTGKILVDAQETTSVPHIYAIGDVAEGRPELTPTAIMAGRLLAQRLSGRTSDLMDYSSV 382
Query: 1484 PTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
PTTVFTPLEYG G SEE AV + GEE E+ ++
Sbjct: 383 PTTVFTPLEYGCVGLSEEAAVARHGEEHVEVYHAFY 418
>ref|NP_001107662.1| glutathione reductase, mitochondrial [Bos taurus].
Length = 519
Score = 174 bits (442), Expect = 2e-43
Identities = 118/352 (33%), Positives = 189/352 (53%), Gaps = 6/352 (1%)
Frame = +2
Query: 527 RWGLGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGS 706
R LGGTCVNVGC+PKK+M A+ + + D +YG+ E+ K +W + E ++
Sbjct: 92 RHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHVDYGFQSCES-KFNWRIIKEKRDAYVSR 150
Query: 707 LNWGYRVALREKKVTYENAYGQFV-GPHRIKATNNKGKEKIYSAEKFLIATG---ERPRY 874
LN Y+ L + + + + F P N K Y+A LIATG P+
Sbjct: 151 LNTIYQNNLTKSHIDIIHGHAAFTCDPQPTVEVNGKK----YTAPHILIATGGVPSVPQE 206
Query: 875 LGIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVR-SILLR 1051
IPG I+SD F L P ++++VGA Y+A+E AG L+ +G ++M+R +LR
Sbjct: 207 SQIPG-ASLGITSDGFFQLEELPRRSVIVGAGYIAVEIAGILSALGSKTSIMIRHDKVLR 265
Query: 1052 GFDQDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNT 1231
FD +++ E +E G++ ++ +V++ +G+ R+ + T + +
Sbjct: 266 TFDSIISSNCTEELENAGIEVLKYSQVREVKKTSSGLELRMVTSIPGREPTFTTIADVDC 325
Query: 1232 VLLAIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGS 1411
+L AIGRD + + L +G++ ++K G I V + + TNV VYA+GD+ GK LTP +
Sbjct: 326 LLWAIGRDPNSWGLNLNKLGIQTDDK-GHIIVDEFQNTNVKGVYAVGDVC-GKALLTPVA 383
Query: 1412 IQAGRLLAXRLYG-GSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEE 1564
I AGR LA RL+ + DY+N+PT VF+ G G +E+ A+ K G+E
Sbjct: 384 IAAGRKLAHRLFECKEDSKLDYDNIPTVVFSHPPIGTVGLTEDEAIYKYGKE 435
>ref|NP_001193099.1| dihydrolipoyl dehydrogenase, mitochondrial [Bos taurus].
Length = 509
Score = 149 bits (376), Expect = 7e-36
Identities = 105/344 (30%), Positives = 176/344 (51%), Gaps = 5/344 (1%)
Frame = +2
Query: 536 LGGTCVNVGCIPKK-LMHQAALLGQAL-RDSRNYGWNVEETIKHDWERMTEAVQNHIGSL 709
LGGTC+NVGCIP K L++ + A +D + G + E ++ + E+M E N + +L
Sbjct: 76 LGGTCLNVGCIPSKALLNNSHFYHLAHGKDFASRGIEMSE-VRLNLEKMMEQKSNAVKAL 134
Query: 710 NWGYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATG-ERPRYLGIP 886
G ++ KV + N YG+ G +++ AT G ++ + LIATG E + GI
Sbjct: 135 TGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGSTQVIDTKNILIATGSEVTPFPGIT 194
Query: 887 GDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM--VRSILLRGFD 1060
D++ +SS SL P K +V+GA + +E +G DVT + + + G D
Sbjct: 195 IDEDTIVSSTGALSLKKVPEKLVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGID 254
Query: 1061 QDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLL 1240
+++ +++ G KF + KV G++ V+ +A + + + +L+
Sbjct: 255 MEISKNFQRILQKQGFKF---KLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLV 311
Query: 1241 AIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQA 1420
IGR T+N+GLE +G+E++ + G+IPV QT +P +YAIGD++ G P L +
Sbjct: 312 CIGRRPFTQNLGLEELGIELDTR-GRIPVNTRFQTKIPNIYAIGDVVAG-PMLAHKAEDE 369
Query: 1421 GRLLAXRLYGGSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEK 1552
G + + GG+ DY VP+ ++T E G SEE E+
Sbjct: 370 GIICVEGMAGGA-VHIDYNCVPSVIYTHPEVAWVGKSEEQLKEE 412
>ref|XP_002686825.1| PREDICTED: dihydrolipoamide dehydrogenase [Bos taurus].
Length = 509
Score = 149 bits (376), Expect = 7e-36
Identities = 105/344 (30%), Positives = 176/344 (51%), Gaps = 5/344 (1%)
Frame = +2
Query: 536 LGGTCVNVGCIPKK-LMHQAALLGQAL-RDSRNYGWNVEETIKHDWERMTEAVQNHIGSL 709
LGGTC+NVGCIP K L++ + A +D + G + E ++ + E+M E N + +L
Sbjct: 76 LGGTCLNVGCIPSKALLNNSHFYHLAHGKDFASRGIEMSE-VRLNLEKMMEQKSNAVKAL 134
Query: 710 NWGYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATG-ERPRYLGIP 886
G ++ KV + N YG+ G +++ AT G ++ + LIATG E + GI
Sbjct: 135 TGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGSTQVIDTKNILIATGSEVTPFPGIT 194
Query: 887 GDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM--VRSILLRGFD 1060
D++ +SS SL P K +V+GA + +E +G DVT + + + G D
Sbjct: 195 IDEDTIVSSTGALSLKKVPEKLVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGID 254
Query: 1061 QDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLL 1240
+++ +++ G KF + KV G++ V+ +A + + + +L+
Sbjct: 255 MEISKNFQRILQKQGFKF---KLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLV 311
Query: 1241 AIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQA 1420
IGR T+N+GLE +G+E++ + G+IPV QT +P +YAIGD++ G P L +
Sbjct: 312 CIGRRPFTQNLGLEELGIELDTR-GRIPVNTRFQTKIPNIYAIGDVVAG-PMLAHKAEDE 369
Query: 1421 GRLLAXRLYGGSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEK 1552
G + + GG+ DY VP+ ++T E G SEE E+
Sbjct: 370 GIICVEGMAGGA-VHIDYNCVPSVIYTHPEVAWVGKSEEQLKEE 412
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 62,567,015
Number of extensions: 1732155
Number of successful extensions: 7979
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 7870
Number of HSP's successfully gapped: 7
Length of query: 537
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 430
Effective length of database: 14,140,958
Effective search space: 6080611940
Effective search space used: 6080611940
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003094
(1612 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001116145.1| thioredoxin reductase 1, cytoplasmic [Canis ... 797 0.0
Alignment gi|NP_001116250.1| thioredoxin reductase 3 [Canis lupus familia... 617 e-179
Alignment gi|XP_850181.1| PREDICTED: similar to thioredoxin reductase 2 i... 412 e-115
Alignment gi|XP_532813.2| PREDICTED: similar to Glutathione reductase, mi... 179 5e-45
Alignment gi|NP_001003294.1| dihydrolipoyl dehydrogenase, mitochondrial p... 143 5e-34
Alignment gi|XP_855591.1| PREDICTED: dihydrolipoamide: NAD+ oxidoreductas... 142 9e-34
>ref|NP_001116145.1| thioredoxin reductase 1, cytoplasmic [Canis lupus familiaris].
Length = 655
Score = 797 bits (2058), Expect = 0.0
Identities = 392/456 (85%), Positives = 414/456 (90%)
Frame = +2
Query: 224 AEDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEM 403
AED RGLE ALSELT ETD PVVFVKRR IGGHG TLKAYQEGRLQ LL MNG+E+LPE+
Sbjct: 107 AEDARGLELALSELTPETDAPVVFVKRRNIGGHGPTLKAYQEGRLQNLLNMNGSEDLPEV 166
Query: 404 YDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLM 583
YDYDLIII R+NK++MVLDFVTPTP GTRWGLGGTCVNVGCIPKKLM
Sbjct: 167 YDYDLIIIGGGSGGLAAAKEAARYNKKIMVLDFVTPTPRGTRWGLGGTCVNVGCIPKKLM 226
Query: 584 HQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENA 763
HQAALLGQAL+DSRNYGW+ EET+KHDW++MTEAVQNHIGSLNWGYRVALREKKVTYENA
Sbjct: 227 HQAALLGQALQDSRNYGWSTEETVKHDWDKMTEAVQNHIGSLNWGYRVALREKKVTYENA 286
Query: 764 YGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCP 943
YGQFVGPHRIKATNNKGKEKIYSAE+FLIATGERPRYLGIPGD+EYCISSDDLFSLPYCP
Sbjct: 287 YGQFVGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDREYCISSDDLFSLPYCP 346
Query: 944 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQ 1123
GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQ
Sbjct: 347 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQ 406
Query: 1124 FVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEIN 1303
FVPIKVEQIEAG PGRLRV A++T+S ETIEGEYNTVLLAIGRDACTR IGLETVGV+IN
Sbjct: 407 FVPIKVEQIEAGTPGRLRVVAQSTSSSETIEGEYNTVLLAIGRDACTRKIGLETVGVKIN 466
Query: 1304 EKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENV 1483
EKTGKIPVTDEEQTNVPY+YAIGDILEGK ELTP +IQAGRLLA RLY GS+ + DYENV
Sbjct: 467 EKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYAGSNVKCDYENV 526
Query: 1484 PTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
PTTVFTPLEYGACG SEE AVEK GEE E+ YF
Sbjct: 527 PTTVFTPLEYGACGLSEERAVEKFGEENIEVYHSYF 562
>ref|NP_001116250.1| thioredoxin reductase 3 [Canis lupus familiaris].
Length = 586
Score = 617 bits (1592), Expect(2) = e-179
Identities = 300/450 (66%), Positives = 358/450 (79%)
Frame = +2
Query: 227 EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
+DG ++ LSE+T++ VP +FV + +GG +T +A+Q G LQKLL+ + A Y
Sbjct: 45 DDGANVQEVLSEITNQRTVPNIFVNKVHMGGCDRTFQAHQSGLLQKLLQEDSA------Y 98
Query: 407 DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
DYDLI+I K+VMVLDFV P+P GT WGLGGTCVNVGCIPKKLMH
Sbjct: 99 DYDLIVIGGGSGGLACAQEAAILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCIPKKLMH 158
Query: 587 QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
QAALLGQALRD+R +GW + +KH WE MTEA+QNHIGSLNWGYR++LREK V Y N+Y
Sbjct: 159 QAALLGQALRDARKFGWEYSQQVKHTWETMTEAIQNHIGSLNWGYRLSLREKAVAYVNSY 218
Query: 767 GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 946
G+FV H+IKATN KG+E Y+A KF++ATG+RPRYLGI GDKEYCI+SDDLFSLPYCPG
Sbjct: 219 GEFVEHHKIKATNRKGQETCYTAAKFVLATGQRPRYLGIQGDKEYCITSDDLFSLPYCPG 278
Query: 947 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
KTLVVGASYVALECAGFLAGIGLDVT+MVRSILLRGFDQ+MA K+G +ME+HGVKF+R+F
Sbjct: 279 KTLVVGASYVALECAGFLAGIGLDVTIMVRSILLRGFDQEMAEKVGSYMEQHGVKFLRKF 338
Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
VP+ V+Q+E G PG+L+V AK+T ETIE YNTVLLAIGRD+CTR IGLE +GV+INE
Sbjct: 339 VPVLVQQLEKGSPGKLKVVAKSTEGPETIEEIYNTVLLAIGRDSCTRKIGLEKIGVKINE 398
Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
K+GKIPV D EQTNVPYVYA+GDILEGK ELTP +IQAG+LLA RL+ G + DY NVP
Sbjct: 399 KSGKIPVNDVEQTNVPYVYAVGDILEGKLELTPVAIQAGKLLARRLFAGRLEKCDYVNVP 458
Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
TTVFTPLEYG CG SEE A+E +E E+
Sbjct: 459 TTVFTPLEYGCCGLSEEKAIEMYKKENLEV 488
Score = 30.0 bits (66), Expect(2) = e-179
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 1576 YHSLLWPLEWTI 1611
YH+L WPLEWT+
Sbjct: 489 YHTLFWPLEWTV 500
>ref|XP_850181.1| PREDICTED: similar to thioredoxin reductase 2 isoform 1 precursor
[Canis familiaris].
Length = 509
Score = 412 bits (1058), Expect = e-115
Identities = 210/396 (53%), Positives = 270/396 (68%), Gaps = 1/396 (0%)
Frame = +2
Query: 407 DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
+YDL++I + K+V V+D+V P+P GT+WGLGGTCVNVGCIPKKLMH
Sbjct: 26 NYDLLVIGGGSGGLACAKEAAQLGKKVAVVDYVEPSPRGTKWGLGGTCVNVGCIPKKLMH 85
Query: 587 QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
QAALLG +RD+ +YGW+V + + HDW M EAVQNH+ SLNWG+RV L+++KVTY N
Sbjct: 86 QAALLGSMIRDAPHYGWDVAQPVLHDWRTMAEAVQNHVKSLNWGHRVQLQDRKVTYFNVK 145
Query: 767 GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRY-LGIPGDKEYCISSDDLFSLPYCP 943
FV H + GKE + SAE +IATG RPRY I G EY I+SDD+F L P
Sbjct: 146 ASFVNEHTVCGVAKGGKETLLSAEHIVIATGGRPRYPTHIEGALEYGITSDDIFWLKESP 205
Query: 944 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQ 1123
GKTLVVGASYVALECAGFL G+GLD T+M+RSI LRGFDQ M++ + E+M G +F+R
Sbjct: 206 GKTLVVGASYVALECAGFLTGLGLDTTIMIRSIPLRGFDQQMSSLVTEYMASQGTRFLRG 265
Query: 1124 FVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEIN 1303
P +V ++ G+L+VT + S + G ++TVL AIGR T+++ LE GV N
Sbjct: 266 CTPSRVRRLP---DGQLQVTWENLTSGKEDVGTFDTVLWAIGRIPETKSLNLEKAGVNTN 322
Query: 1304 EKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENV 1483
+ KI V +E T++P++YAIGD+ EG+PELTP +I AGRLLA RL G + DY+NV
Sbjct: 323 PNSQKILVNAQEATSIPHIYAIGDVAEGRPELTPTAIMAGRLLAQRLCGQASDVMDYDNV 382
Query: 1484 PTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
PTTVFTPLEYG G SEE AV + GEE E+ Y+
Sbjct: 383 PTTVFTPLEYGCVGLSEEEAVTRHGEEHVEVYHAYY 418
>ref|XP_532813.2| PREDICTED: similar to Glutathione reductase, mitochondrial precursor
(GR) (GRase) [Canis familiaris].
Length = 521
Score = 179 bits (455), Expect = 5e-45
Identities = 118/350 (33%), Positives = 192/350 (54%), Gaps = 7/350 (2%)
Frame = +2
Query: 536 LGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNW 715
LGGTCVNVGC+PKK+M A+ + + D +YG+ E+ K +W + E ++ LN
Sbjct: 97 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHVDYGFQSCES-KFNWRVIKEKRDAYVSRLNT 155
Query: 716 GYRVALREKKVTYENAYGQFV--GPHRIKATNNKGKEKIYSAEKFLIATG---ERPRYLG 880
Y+ L + + + + F I+ NK Y+A LIATG RP+
Sbjct: 156 IYQNNLTKSHIEIIHGHAAFTCDSEPTIEVNGNK-----YTAPHILIATGGVPSRPQESQ 210
Query: 881 IPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVR-SILLRGF 1057
IPG I+SD F L PG++++VGA Y+A+E AG L+ +G ++M+R +LR F
Sbjct: 211 IPG-ASLGITSDGFFQLEELPGRSVIVGAGYIAVEIAGILSALGSKTSLMIRHDKVLRNF 269
Query: 1058 DQDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVL 1237
D +++ E +E G++ ++ +V++ +G+ + +A T + + +L
Sbjct: 270 DSIISSNCTEELENSGIEVLKYSQVKEVKKTSSGLELCMITSAPGRKPTLTTIPDVDCLL 329
Query: 1238 LAIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQ 1417
AIGRD + + L+ VG++ ++K G I V + + T+V +YA+GD+ GK LTP +I
Sbjct: 330 WAIGRDPNSSGLNLDKVGIQTDDK-GHIIVDEFQNTSVKGIYAVGDVC-GKALLTPVAIA 387
Query: 1418 AGRLLAXRLYG-GSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEE 1564
AGR LA RL+ + DY+N+PT VF+ G G +E+ A+ K G+E
Sbjct: 388 AGRKLAHRLFECKEDSKLDYDNIPTVVFSHPPIGTVGLTEDEAIYKYGKE 437
>ref|NP_001003294.1| dihydrolipoyl dehydrogenase, mitochondrial precursor [Canis lupus
familiaris].
Length = 509
Score = 143 bits (360), Expect = 5e-34
Identities = 102/344 (29%), Positives = 173/344 (50%), Gaps = 5/344 (1%)
Frame = +2
Query: 536 LGGTCVNVGCIPKK-LMHQAALLGQAL-RDSRNYGWNVEETIKHDWERMTEAVQNHIGSL 709
LGGTC+NVGCIP K L++ + A +D + G + E ++ + E+M E + +L
Sbjct: 76 LGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSE-VRLNLEKMMEQKSTAVKAL 134
Query: 710 NWGYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATG-ERPRYLGIP 886
G ++ KV + N YG+ G +++ A G ++ + LIATG E + GI
Sbjct: 135 TGGIAHLFKQNKVVHVNGYGKITGKNQVTAKKADGSTQVIDTKNILIATGSEVTPFPGIT 194
Query: 887 GDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM--VRSILLRGFD 1060
D++ +SS SL P K +V+GA + +E +G DVT + + + G D
Sbjct: 195 IDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGID 254
Query: 1061 QDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLL 1240
+++ +++ G KF + KV G++ V+ + + + + +L+
Sbjct: 255 MEISKNFQRILQKQGFKF---KLNTKVTGATKKSDGKIDVSIEGASGGKAEVITCDVLLV 311
Query: 1241 AIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQA 1420
IGR T+N+GLE +G+E++ + G+IPV QT +P +YAIGD++ G P L +
Sbjct: 312 CIGRRPFTQNLGLEELGIELDPR-GRIPVNTRFQTKIPNIYAIGDVVAG-PMLAHKAEDE 369
Query: 1421 GRLLAXRLYGGSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEK 1552
G + + GG+ DY VP+ ++T E G SEE E+
Sbjct: 370 GIICVEGMAGGA-VPIDYNCVPSVIYTHPEVAWVGKSEEQLKEE 412
>ref|XP_855591.1| PREDICTED: dihydrolipoamide: NAD+ oxidoreductase [Canis familiaris].
Length = 509
Score = 142 bits (358), Expect = 9e-34
Identities = 102/344 (29%), Positives = 172/344 (50%), Gaps = 5/344 (1%)
Frame = +2
Query: 536 LGGTCVNVGCIPKK-LMHQAALLGQAL-RDSRNYGWNVEETIKHDWERMTEAVQNHIGSL 709
LGGTC+NVGCIP K L++ + A +D + G + E ++ + E+M E + +L
Sbjct: 76 LGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSE-VRLNLEKMMEQKSTAVKAL 134
Query: 710 NWGYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATG-ERPRYLGIP 886
G ++ KV + N YG+ G +++ A G ++ + LIATG E + GI
Sbjct: 135 TGGIAHLFKQNKVVHVNGYGKITGKNQVTAKKADGSTQVIDTKNILIATGSEVTPFPGIT 194
Query: 887 GDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM--VRSILLRGFD 1060
D++ +SS SL P K +V+GA + +E +G DVT + + + G D
Sbjct: 195 IDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGID 254
Query: 1061 QDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLL 1240
+++ +++ G KF + KV G++ V + + + + +L+
Sbjct: 255 MEISKNFQRILQKQGFKF---KLNTKVTGATKKSDGKIDVFIEGASGGKAEVITCDVLLV 311
Query: 1241 AIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQA 1420
IGR T+N+GLE +G+E++ + G+IPV QT +P +YAIGD++ G P L +
Sbjct: 312 CIGRRPFTQNLGLEELGIELDPR-GRIPVNTRFQTKIPNIYAIGDVVAG-PMLAHKAEDE 369
Query: 1421 GRLLAXRLYGGSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEK 1552
G + + GG+ DY VP+ ++T E G SEE E+
Sbjct: 370 GIICVEGMAGGA-VHIDYNCVPSVIYTHPEVAWVGKSEEQLKEE 412
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 65,374,459
Number of extensions: 1792454
Number of successful extensions: 7928
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 7819
Number of HSP's successfully gapped: 7
Length of query: 537
Length of database: 18,874,504
Length adjustment: 108
Effective length of query: 429
Effective length of database: 15,274,216
Effective search space: 6552638664
Effective search space used: 6552638664
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003094
(1612 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001087240.1| thioredoxin reductase 1, cytoplasmic isoform... 788 0.0
Alignment gi|NP_003321.3| thioredoxin reductase 1, cytoplasmic isoform 1 ... 788 0.0
Alignment gi|NP_877393.1| thioredoxin reductase 1, cytoplasmic isoform 2 ... 708 0.0
Alignment gi|NP_877420.1| thioredoxin reductase 1, cytoplasmic isoform 2 ... 708 0.0
Alignment gi|NP_877419.1| thioredoxin reductase 1, cytoplasmic isoform 2 ... 708 0.0
Alignment gi|NP_443115.1| thioredoxin reductase 3 isoform 1 [Homo sapiens]. 617 e-179
Alignment gi|NP_001166984.1| thioredoxin reductase 3 isoform 2 [Homo sapi... 580 e-165
Alignment gi|NP_006431.2| thioredoxin reductase 2, mitochondrial precurso... 417 e-116
Alignment gi|NP_000628.2| glutathione reductase, mitochondrial isoform 1 ... 169 7e-42
Alignment gi|NP_001182031.1| glutathione reductase, mitochondrial isoform... 154 3e-37
>ref|NP_001087240.1| thioredoxin reductase 1, cytoplasmic isoform 3 [Homo sapiens].
Length = 649
Score = 788 bits (2034), Expect = 0.0
Identities = 387/455 (85%), Positives = 410/455 (90%)
Frame = +2
Query: 227 EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
EDGR LE LSEL +ETD+PVVFVK+RKIGGHG TLKAYQEGRLQKLLKMNG E+LP+ Y
Sbjct: 102 EDGRALEGTLSELAAETDLPVVFVKQRKIGGHGPTLKAYQEGRLQKLLKMNGPEDLPKSY 161
Query: 407 DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
DYDLIII ++ K+VMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH
Sbjct: 162 DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 221
Query: 587 QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
QAALLGQAL+DSRNYGW VEET+KHDW+RM EAVQNHIGSLNWGYRVALREKKV YENAY
Sbjct: 222 QAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAY 281
Query: 767 GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 946
GQF+GPHRIKATNNKGKEKIYSAE+FLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG
Sbjct: 282 GQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 341
Query: 947 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHG+KFIRQF
Sbjct: 342 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQF 401
Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
VPIKVEQIEAG PGRLRV A++TNS+E IEGEYNTV+LAIGRDACTR IGLETVGV+INE
Sbjct: 402 VPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINE 461
Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
KTGKIPVTDEEQTNVPY+YAIGDILE K ELTP +IQAGRLLA RLY GS + DYENVP
Sbjct: 462 KTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVP 521
Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
TTVFTPLEYGACG SEE AVEK GEE E+ YF
Sbjct: 522 TTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYF 556
>ref|NP_003321.3| thioredoxin reductase 1, cytoplasmic isoform 1 [Homo sapiens].
Length = 551
Score = 788 bits (2034), Expect = 0.0
Identities = 387/455 (85%), Positives = 410/455 (90%)
Frame = +2
Query: 227 EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
EDGR LE LSEL +ETD+PVVFVK+RKIGGHG TLKAYQEGRLQKLLKMNG E+LP+ Y
Sbjct: 4 EDGRALEGTLSELAAETDLPVVFVKQRKIGGHGPTLKAYQEGRLQKLLKMNGPEDLPKSY 63
Query: 407 DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
DYDLIII ++ K+VMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH
Sbjct: 64 DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 123
Query: 587 QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
QAALLGQAL+DSRNYGW VEET+KHDW+RM EAVQNHIGSLNWGYRVALREKKV YENAY
Sbjct: 124 QAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAY 183
Query: 767 GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 946
GQF+GPHRIKATNNKGKEKIYSAE+FLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG
Sbjct: 184 GQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 243
Query: 947 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHG+KFIRQF
Sbjct: 244 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQF 303
Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
VPIKVEQIEAG PGRLRV A++TNS+E IEGEYNTV+LAIGRDACTR IGLETVGV+INE
Sbjct: 304 VPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINE 363
Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
KTGKIPVTDEEQTNVPY+YAIGDILE K ELTP +IQAGRLLA RLY GS + DYENVP
Sbjct: 364 KTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGSTVKCDYENVP 423
Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
TTVFTPLEYGACG SEE AVEK GEE E+ YF
Sbjct: 424 TTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYF 458
>ref|NP_877393.1| thioredoxin reductase 1, cytoplasmic isoform 2 [Homo sapiens].
Length = 499
Score = 708 bits (1827), Expect = 0.0
Identities = 346/406 (85%), Positives = 366/406 (90%)
Frame = +2
Query: 374 MNGAEELPEMYDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCV 553
MNG E+LP+ YDYDLIII ++ K+VMVLDFVTPTPLGTRWGLGGTCV
Sbjct: 1 MNGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCV 60
Query: 554 NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL 733
NVGCIPKKLMHQAALLGQAL+DSRNYGW VEET+KHDW+RM EAVQNHIGSLNWGYRVAL
Sbjct: 61 NVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVAL 120
Query: 734 REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS 913
REKKV YENAYGQF+GPHRIKATNNKGKEKIYSAE+FLIATGERPRYLGIPGDKEYCISS
Sbjct: 121 REKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISS 180
Query: 914 DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 1093
DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM
Sbjct: 181 DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 240
Query: 1094 EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI 1273
EEHG+KFIRQFVPIKVEQIEAG PGRLRV A++TNS+E IEGEYNTV+LAIGRDACTR I
Sbjct: 241 EEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKI 300
Query: 1274 GLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGG 1453
GLETVGV+INEKTGKIPVTDEEQTNVPY+YAIGDILE K ELTP +IQAGRLLA RLY G
Sbjct: 301 GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAG 360
Query: 1454 SHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
S + DYENVPTTVFTPLEYGACG SEE AVEK GEE E+ YF
Sbjct: 361 STVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYF 406
>ref|NP_877420.1| thioredoxin reductase 1, cytoplasmic isoform 2 [Homo sapiens].
Length = 499
Score = 708 bits (1827), Expect = 0.0
Identities = 346/406 (85%), Positives = 366/406 (90%)
Frame = +2
Query: 374 MNGAEELPEMYDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCV 553
MNG E+LP+ YDYDLIII ++ K+VMVLDFVTPTPLGTRWGLGGTCV
Sbjct: 1 MNGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCV 60
Query: 554 NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL 733
NVGCIPKKLMHQAALLGQAL+DSRNYGW VEET+KHDW+RM EAVQNHIGSLNWGYRVAL
Sbjct: 61 NVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVAL 120
Query: 734 REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS 913
REKKV YENAYGQF+GPHRIKATNNKGKEKIYSAE+FLIATGERPRYLGIPGDKEYCISS
Sbjct: 121 REKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISS 180
Query: 914 DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 1093
DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM
Sbjct: 181 DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 240
Query: 1094 EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI 1273
EEHG+KFIRQFVPIKVEQIEAG PGRLRV A++TNS+E IEGEYNTV+LAIGRDACTR I
Sbjct: 241 EEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKI 300
Query: 1274 GLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGG 1453
GLETVGV+INEKTGKIPVTDEEQTNVPY+YAIGDILE K ELTP +IQAGRLLA RLY G
Sbjct: 301 GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAG 360
Query: 1454 SHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
S + DYENVPTTVFTPLEYGACG SEE AVEK GEE E+ YF
Sbjct: 361 STVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYF 406
>ref|NP_877419.1| thioredoxin reductase 1, cytoplasmic isoform 2 [Homo sapiens].
Length = 499
Score = 708 bits (1827), Expect = 0.0
Identities = 346/406 (85%), Positives = 366/406 (90%)
Frame = +2
Query: 374 MNGAEELPEMYDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCV 553
MNG E+LP+ YDYDLIII ++ K+VMVLDFVTPTPLGTRWGLGGTCV
Sbjct: 1 MNGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCV 60
Query: 554 NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL 733
NVGCIPKKLMHQAALLGQAL+DSRNYGW VEET+KHDW+RM EAVQNHIGSLNWGYRVAL
Sbjct: 61 NVGCIPKKLMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVAL 120
Query: 734 REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS 913
REKKV YENAYGQF+GPHRIKATNNKGKEKIYSAE+FLIATGERPRYLGIPGDKEYCISS
Sbjct: 121 REKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISS 180
Query: 914 DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 1093
DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM
Sbjct: 181 DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 240
Query: 1094 EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI 1273
EEHG+KFIRQFVPIKVEQIEAG PGRLRV A++TNS+E IEGEYNTV+LAIGRDACTR I
Sbjct: 241 EEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKI 300
Query: 1274 GLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGG 1453
GLETVGV+INEKTGKIPVTDEEQTNVPY+YAIGDILE K ELTP +IQAGRLLA RLY G
Sbjct: 301 GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAG 360
Query: 1454 SHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
S + DYENVPTTVFTPLEYGACG SEE AVEK GEE E+ YF
Sbjct: 361 STVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEVYHSYF 406
>ref|NP_443115.1| thioredoxin reductase 3 isoform 1 [Homo sapiens].
Length = 643
Score = 617 bits (1592), Expect(2) = e-179
Identities = 302/450 (67%), Positives = 358/450 (79%)
Frame = +2
Query: 227 EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
+DG ++ LSE+T++ VP +FV + +GG QT +AYQ G LQKLL+ + A Y
Sbjct: 102 DDGARVQEVLSEITNQKTVPNIFVNKVHVGGCDQTFQAYQSGLLQKLLQEDLA------Y 155
Query: 407 DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
DYDLIII K+VMVLDFV P+P GT WGLGGTCVNVGCIPKKLMH
Sbjct: 156 DYDLIIIGGGSGGLSCAKEAAILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCIPKKLMH 215
Query: 587 QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
QAALLGQAL DSR +GW + ++H+WE MT+A+QNHI SLNWGYR++LREK V Y N+Y
Sbjct: 216 QAALLGQALCDSRKFGWEYNQQVRHNWETMTKAIQNHISSLNWGYRLSLREKAVAYVNSY 275
Query: 767 GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 946
G+FV H+IKATN KG+E Y+A +F+IATGERPRYLGI GDKEYCI+SDDLFSLPYCPG
Sbjct: 276 GEFVEHHKIKATNKKGQETYYTAAQFVIATGERPRYLGIQGDKEYCITSDDLFSLPYCPG 335
Query: 947 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
KTLVVGASYVALECAGFLAG GLDVTVMVRSILLRGFDQ+MA K+G +ME+HGVKF+R+F
Sbjct: 336 KTLVVGASYVALECAGFLAGFGLDVTVMVRSILLRGFDQEMAEKVGSYMEQHGVKFLRKF 395
Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
+P+ V+Q+E G PG+L+V AK+T ETIEG YNTVLLAIGRD+CTR IGLE +GV+INE
Sbjct: 396 IPVMVQQLEKGSPGKLKVLAKSTEGTETIEGVYNTVLLAIGRDSCTRKIGLEKIGVKINE 455
Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
K+GKIPV D EQTNVPYVYA+GDILE KPELTP +IQ+G+LLA RL+G S + DY NVP
Sbjct: 456 KSGKIPVNDVEQTNVPYVYAVGDILEDKPELTPVAIQSGKLLAQRLFGASLEKCDYINVP 515
Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
TTVFTPLEYG CG SEE A+E +E EI
Sbjct: 516 TTVFTPLEYGCCGLSEEKAIEVYKKENLEI 545
Score = 30.0 bits (66), Expect(2) = e-179
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 1576 YHSLLWPLEWTI 1611
YH+L WPLEWT+
Sbjct: 546 YHTLFWPLEWTV 557
>ref|NP_001166984.1| thioredoxin reductase 3 isoform 2 [Homo sapiens].
Length = 607
Score = 580 bits (1494), Expect = e-165
Identities = 286/449 (63%), Positives = 345/449 (76%)
Frame = +2
Query: 227 EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
+DG ++ LSE+T++ VP +FV + +GG QT +AYQ G LQKLL+ + A Y
Sbjct: 102 DDGARVQEVLSEITNQKTVPNIFVNKVHVGGCDQTFQAYQSGLLQKLLQEDLA------Y 155
Query: 407 DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
DYDLIII K+VMVLDFV P+P GT WGLGGTCVNVGCIPKKLMH
Sbjct: 156 DYDLIIIGGGSGGLSCAKEAAILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCIPKKLMH 215
Query: 587 QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
QAALLGQAL DSR +GW + ++H+WE MT+A+QNHI SLNWGYR++LREK V Y N+Y
Sbjct: 216 QAALLGQALCDSRKFGWEYNQQVRHNWETMTKAIQNHISSLNWGYRLSLREKAVAYVNSY 275
Query: 767 GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 946
G+FV H+IKATN KG+E Y+A +F+IATGERPRYLGI GDKEYCI+SDDLFSLPYCPG
Sbjct: 276 GEFVEHHKIKATNKKGQETYYTAAQFVIATGERPRYLGIQGDKEYCITSDDLFSLPYCPG 335
Query: 947 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
KTLVVGASYVALECAGFLAG GLDVTVMVRSILLRGFDQ+MA K+G +ME+HGVKF+R+F
Sbjct: 336 KTLVVGASYVALECAGFLAGFGLDVTVMVRSILLRGFDQEMAEKVGSYMEQHGVKFLRKF 395
Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
+P+ V+Q+E G PG+L+V AK+T ETIEG YNTVLLAIGRD+CTR IGLE +GV+INE
Sbjct: 396 IPVMVQQLEKGSPGKLKVLAKSTEGTETIEGVYNTVLLAIGRDSCTRKIGLEKIGVKINE 455
Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
K+GKIPV D EQTNVPYVYA+GDILE KPELTP +IQ+G+LLA RL+G S E +
Sbjct: 456 KSGKIPVNDVEQTNVPYVYAVGDILEDKPELTPVAIQSGKLLAQRLFGAS-----LEKIY 510
Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYE 1573
T+F PLE+ G K+ K++
Sbjct: 511 HTLFWPLEWTVAGRENNTCYAKIICNKFD 539
>ref|NP_006431.2| thioredoxin reductase 2, mitochondrial precursor [Homo sapiens].
Length = 524
Score = 417 bits (1073), Expect = e-116
Identities = 211/391 (53%), Positives = 271/391 (69%), Gaps = 1/391 (0%)
Frame = +2
Query: 407 DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
DYDL+++ + ++V V+D+V P+P GTRWGLGGTCVNVGCIPKKLMH
Sbjct: 39 DYDLLVVGGGSGGLACAKEAAQLGRKVAVVDYVEPSPQGTRWGLGGTCVNVGCIPKKLMH 98
Query: 587 QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
QAALLG ++D+ NYGW V + + HDW +M EAVQNH+ SLNWG+RV L+++KV Y N
Sbjct: 99 QAALLGGLIQDAPNYGWEVAQPVPHDWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK 158
Query: 767 GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRY-LGIPGDKEYCISSDDLFSLPYCP 943
FV H + GKE + SA+ +IATG RPRY I G EY I+SDD+F L P
Sbjct: 159 ASFVDEHTVCGVAKGGKEILLSADHIIIATGGRPRYPTHIEGALEYGITSDDIFWLKESP 218
Query: 944 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQ 1123
GKTLVVGASYVALECAGFL GIGLD T+M+RSI LRGFDQ M++ + EHM HG +F+R
Sbjct: 219 GKTLVVGASYVALECAGFLTGIGLDTTIMMRSIPLRGFDQQMSSMVIEHMASHGTRFLRG 278
Query: 1124 FVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEIN 1303
P +V ++ G+L+VT + + + + G ++TVL AIGR TR++ LE GV+ +
Sbjct: 279 CAPSRVRRLP---DGQLQVTWEDSTTGKEDTGTFDTVLWAIGRVPDTRSLNLEKAGVDTS 335
Query: 1304 EKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENV 1483
T KI V E T+VP++YAIGD++EG+PELTP +I AGRLL RL+GGS DY+NV
Sbjct: 336 PDTQKILVDSREATSVPHIYAIGDVVEGRPELTPIAIMAGRLLVQRLFGGSSDLMDYDNV 395
Query: 1484 PTTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
PTTVFTPLEYG G SEE AV + G+E E+
Sbjct: 396 PTTVFTPLEYGCVGLSEEEAVARHGQEHVEV 426
>ref|NP_000628.2| glutathione reductase, mitochondrial isoform 1 precursor [Homo
sapiens].
Length = 522
Score = 169 bits (428), Expect = 7e-42
Identities = 121/356 (33%), Positives = 188/356 (52%), Gaps = 13/356 (3%)
Frame = +2
Query: 536 LGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNW 715
LGGTCVNVGC+PKK+M A+ + + D +YG+ E K +W + E ++ LN
Sbjct: 98 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEG-KFNWRVIKEKRDAYVSRLNA 156
Query: 716 GYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATG---ERPRYLGIP 886
Y+ L + + + F + GK+ Y+A LIATG P IP
Sbjct: 157 IYQNNLTKSHIEIIRGHAAFTSDPK-PTIEVSGKK--YTAPHILIATGGMPSTPHESQIP 213
Query: 887 GDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVR-SILLRGFDQ 1063
G I+SD F L PG++++VGA Y+A+E AG L+ +G ++M+R +LR FD
Sbjct: 214 G-ASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDS 272
Query: 1064 DMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGM--------PGRLRVTAKATNSDETIEG 1219
++ E +E GV+ ++ +V++ +G+ PGRL V T+
Sbjct: 273 MISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVM--------TMIP 324
Query: 1220 EYNTVLLAIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPEL 1399
+ + +L AIGR T+++ L +G++ ++K G I V + + TNV +YA+GD+ GK L
Sbjct: 325 DVDCLLWAIGRVPNTKDLSLNKLGIQTDDK-GHIIVDEFQNTNVKGIYAVGDVC-GKALL 382
Query: 1400 TPGSIQAGRLLAXRLYG-GSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEE 1564
TP +I AGR LA RL+ + DY N+PT VF+ G G +E+ A+ K G E
Sbjct: 383 TPVAIAAGRKLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIE 438
>ref|NP_001182031.1| glutathione reductase, mitochondrial isoform 2 precursor [Homo
sapiens].
Length = 493
Score = 154 bits (388), Expect = 3e-37
Identities = 116/347 (33%), Positives = 177/347 (51%), Gaps = 4/347 (1%)
Frame = +2
Query: 536 LGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNW 715
LGGTCVNVGC+PKK+M A+ + + D +YG+ E K +W + E ++ LN
Sbjct: 98 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEG-KFNWRVIKEKRDAYVSRLNA 156
Query: 716 GYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATG---ERPRYLGIP 886
Y+ L + + + F + GK+ Y+A LIATG P IP
Sbjct: 157 IYQNNLTKSHIEIIRGHAAFTSDPK-PTIEVSGKK--YTAPHILIATGGMPSTPHESQIP 213
Query: 887 GDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQD 1066
G I+SD F L PG++++VGA Y+A+E AG L+ +G ++M+R
Sbjct: 214 G-ASLGITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIR---------- 262
Query: 1067 MANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAI 1246
H + VK + ++V + A +PGRL V T+ + + +L AI
Sbjct: 263 -------HDKVKEVK--KTLSGLEVSMVTA-VPGRLPVM--------TMIPDVDCLLWAI 304
Query: 1247 GRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGR 1426
GR T+++ L +G++ ++K G I V + + TNV +YA+GD+ GK LTP +I AGR
Sbjct: 305 GRVPNTKDLSLNKLGIQTDDK-GHIIVDEFQNTNVKGIYAVGDVC-GKALLTPVAIAAGR 362
Query: 1427 LLAXRLYG-GSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEE 1564
LA RL+ + DY N+PT VF+ G G +E+ A+ K G E
Sbjct: 363 KLAHRLFEYKEDSKLDYNNIPTVVFSHPPIGTVGLTEDEAIHKYGIE 409
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 64,124,462
Number of extensions: 1754394
Number of successful extensions: 7727
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 7643
Number of HSP's successfully gapped: 16
Length of query: 537
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 430
Effective length of database: 14,770,016
Effective search space: 6351106880
Effective search space used: 6351106880
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003094
(1612 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001035988.1| thioredoxin reductase 1, cytoplasmic isoform... 707 0.0
Alignment gi|NP_001035979.1| thioredoxin reductase 1, cytoplasmic isoform... 698 0.0
Alignment gi|NP_001035978.1| thioredoxin reductase 1, cytoplasmic isoform... 698 0.0
Alignment gi|NP_056577.2| thioredoxin reductase 1, cytoplasmic isoform 2 ... 698 0.0
Alignment gi|NP_001171529.1| thioredoxin reductase 3 isoform 1 [Mus muscu... 606 e-175
Alignment gi|NP_694802.2| thioredoxin reductase 3 isoform 2 [Mus musculus]. 606 e-175
Alignment gi|NP_038739.2| thioredoxin reductase 2, mitochondrial precurso... 411 e-115
Alignment gi|NP_001171530.1| thioredoxin reductase 3 isoform 3 [Mus muscu... 219 2e-57
Alignment gi|NP_001171531.1| thioredoxin reductase 3 isoform 4 [Mus muscu... 219 2e-57
Alignment gi|NP_034474.4| glutathione reductase, mitochondrial precursor ... 178 9e-45
>ref|NP_001035988.1| thioredoxin reductase 1, cytoplasmic isoform 1 [Mus musculus].
Length = 613
Score = 707 bits (1824), Expect = 0.0
Identities = 341/416 (81%), Positives = 377/416 (90%)
Frame = +2
Query: 344 QEGRLQKLLKMNGAEELPEMYDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLG 523
++G+LQKL MNG+++ P YD+DLIII +F+K+V+VLDFVTPTPLG
Sbjct: 105 KKGQLQKLPTMNGSKDPPGSYDFDLIIIGGGSGGLAAAKEAAKFDKKVLVLDFVTPTPLG 164
Query: 524 TRWGLGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIG 703
TRWGLGGTCVNVGCIPKKLMHQAALLGQAL+DSRNYGW VE+T+KHDWE+MTE+VQ+HIG
Sbjct: 165 TRWGLGGTCVNVGCIPKKLMHQAALLGQALKDSRNYGWKVEDTVKHDWEKMTESVQSHIG 224
Query: 704 SLNWGYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGI 883
SLNWGYRVALREKKV YENAYG+F+GPHRI ATNNKGKEKIYSAE+FLIATGERPRYLGI
Sbjct: 225 SLNWGYRVALREKKVVYENAYGRFIGPHRIVATNNKGKEKIYSAERFLIATGERPRYLGI 284
Query: 884 PGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQ 1063
PGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQ
Sbjct: 285 PGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQ 344
Query: 1064 DMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLA 1243
DMANKIGEHMEEHG+KFIRQFVP K+EQIEAG PGRLRVTA++TNS+ETIEGE+NTVLLA
Sbjct: 345 DMANKIGEHMEEHGIKFIRQFVPTKIEQIEAGTPGRLRVTAQSTNSEETIEGEFNTVLLA 404
Query: 1244 IGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAG 1423
+GRD+CTR IGLETVGV+INEKTGKIPVTDEEQTNVPY+YAIGDILEGK ELTP +IQAG
Sbjct: 405 VGRDSCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAG 464
Query: 1424 RLLAXRLYGGSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
RLLA RLYGGS+ + DY+NVPTTVFTPLEYG CG SEE AVEK GEE E+ +F
Sbjct: 465 RLLAQRLYGGSNVKCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFF 520
>ref|NP_001035979.1| thioredoxin reductase 1, cytoplasmic isoform 2 [Mus musculus].
Length = 499
Score = 698 bits (1801), Expect = 0.0
Identities = 336/406 (82%), Positives = 369/406 (90%)
Frame = +2
Query: 374 MNGAEELPEMYDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCV 553
MNG+++ P YD+DLIII +F+K+V+VLDFVTPTPLGTRWGLGGTCV
Sbjct: 1 MNGSKDPPGSYDFDLIIIGGGSGGLAAAKEAAKFDKKVLVLDFVTPTPLGTRWGLGGTCV 60
Query: 554 NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL 733
NVGCIPKKLMHQAALLGQAL+DSRNYGW VE+T+KHDWE+MTE+VQ+HIGSLNWGYRVAL
Sbjct: 61 NVGCIPKKLMHQAALLGQALKDSRNYGWKVEDTVKHDWEKMTESVQSHIGSLNWGYRVAL 120
Query: 734 REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS 913
REKKV YENAYG+F+GPHRI ATNNKGKEKIYSAE+FLIATGERPRYLGIPGDKEYCISS
Sbjct: 121 REKKVVYENAYGRFIGPHRIVATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISS 180
Query: 914 DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 1093
DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM
Sbjct: 181 DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 240
Query: 1094 EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI 1273
EEHG+KFIRQFVP K+EQIEAG PGRLRVTA++TNS+ETIEGE+NTVLLA+GRD+CTR I
Sbjct: 241 EEHGIKFIRQFVPTKIEQIEAGTPGRLRVTAQSTNSEETIEGEFNTVLLAVGRDSCTRTI 300
Query: 1274 GLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGG 1453
GLETVGV+INEKTGKIPVTDEEQTNVPY+YAIGDILEGK ELTP +IQAGRLLA RLYGG
Sbjct: 301 GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGG 360
Query: 1454 SHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
S+ + DY+NVPTTVFTPLEYG CG SEE AVEK GEE E+ +F
Sbjct: 361 SNVKCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFF 406
>ref|NP_001035978.1| thioredoxin reductase 1, cytoplasmic isoform 2 [Mus musculus].
Length = 499
Score = 698 bits (1801), Expect = 0.0
Identities = 336/406 (82%), Positives = 369/406 (90%)
Frame = +2
Query: 374 MNGAEELPEMYDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCV 553
MNG+++ P YD+DLIII +F+K+V+VLDFVTPTPLGTRWGLGGTCV
Sbjct: 1 MNGSKDPPGSYDFDLIIIGGGSGGLAAAKEAAKFDKKVLVLDFVTPTPLGTRWGLGGTCV 60
Query: 554 NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL 733
NVGCIPKKLMHQAALLGQAL+DSRNYGW VE+T+KHDWE+MTE+VQ+HIGSLNWGYRVAL
Sbjct: 61 NVGCIPKKLMHQAALLGQALKDSRNYGWKVEDTVKHDWEKMTESVQSHIGSLNWGYRVAL 120
Query: 734 REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS 913
REKKV YENAYG+F+GPHRI ATNNKGKEKIYSAE+FLIATGERPRYLGIPGDKEYCISS
Sbjct: 121 REKKVVYENAYGRFIGPHRIVATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISS 180
Query: 914 DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 1093
DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM
Sbjct: 181 DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 240
Query: 1094 EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI 1273
EEHG+KFIRQFVP K+EQIEAG PGRLRVTA++TNS+ETIEGE+NTVLLA+GRD+CTR I
Sbjct: 241 EEHGIKFIRQFVPTKIEQIEAGTPGRLRVTAQSTNSEETIEGEFNTVLLAVGRDSCTRTI 300
Query: 1274 GLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGG 1453
GLETVGV+INEKTGKIPVTDEEQTNVPY+YAIGDILEGK ELTP +IQAGRLLA RLYGG
Sbjct: 301 GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGG 360
Query: 1454 SHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
S+ + DY+NVPTTVFTPLEYG CG SEE AVEK GEE E+ +F
Sbjct: 361 SNVKCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFF 406
>ref|NP_056577.2| thioredoxin reductase 1, cytoplasmic isoform 2 [Mus musculus].
Length = 499
Score = 698 bits (1801), Expect = 0.0
Identities = 336/406 (82%), Positives = 369/406 (90%)
Frame = +2
Query: 374 MNGAEELPEMYDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCV 553
MNG+++ P YD+DLIII +F+K+V+VLDFVTPTPLGTRWGLGGTCV
Sbjct: 1 MNGSKDPPGSYDFDLIIIGGGSGGLAAAKEAAKFDKKVLVLDFVTPTPLGTRWGLGGTCV 60
Query: 554 NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL 733
NVGCIPKKLMHQAALLGQAL+DSRNYGW VE+T+KHDWE+MTE+VQ+HIGSLNWGYRVAL
Sbjct: 61 NVGCIPKKLMHQAALLGQALKDSRNYGWKVEDTVKHDWEKMTESVQSHIGSLNWGYRVAL 120
Query: 734 REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS 913
REKKV YENAYG+F+GPHRI ATNNKGKEKIYSAE+FLIATGERPRYLGIPGDKEYCISS
Sbjct: 121 REKKVVYENAYGRFIGPHRIVATNNKGKEKIYSAERFLIATGERPRYLGIPGDKEYCISS 180
Query: 914 DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 1093
DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM
Sbjct: 181 DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 240
Query: 1094 EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI 1273
EEHG+KFIRQFVP K+EQIEAG PGRLRVTA++TNS+ETIEGE+NTVLLA+GRD+CTR I
Sbjct: 241 EEHGIKFIRQFVPTKIEQIEAGTPGRLRVTAQSTNSEETIEGEFNTVLLAVGRDSCTRTI 300
Query: 1274 GLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGG 1453
GLETVGV+INEKTGKIPVTDEEQTNVPY+YAIGDILEGK ELTP +IQAGRLLA RLYGG
Sbjct: 301 GLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGG 360
Query: 1454 SHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
S+ + DY+NVPTTVFTPLEYG CG SEE AVEK GEE E+ +F
Sbjct: 361 SNVKCDYDNVPTTVFTPLEYGCCGLSEEKAVEKFGEENIEVYHSFF 406
>ref|NP_001171529.1| thioredoxin reductase 3 isoform 1 [Mus musculus].
Length = 652
Score = 606 bits (1562), Expect(2) = e-175
Identities = 293/450 (65%), Positives = 356/450 (79%)
Frame = +2
Query: 227 EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
+DG ++ L+E++++ VP +FV + +GG +T +A+Q G LQKLL+ + A +
Sbjct: 111 DDGASVQEVLTEISNQKTVPNIFVNKVHVGGCDRTFQAHQNGLLQKLLQDDSA------H 164
Query: 407 DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
DYDLIII K+VMVLDFV P+P GT WGLGGTCVNVGCIPKKLMH
Sbjct: 165 DYDLIIIGGGSGGLSCAKEAANLGKKVMVLDFVVPSPQGTTWGLGGTCVNVGCIPKKLMH 224
Query: 587 QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
QAALLG AL+D++ YGW + +KH+WE MTEA+Q+HIGSLNWGYRV LREK VTY N++
Sbjct: 225 QAALLGHALQDAKKYGWEYNQQVKHNWEAMTEAIQSHIGSLNWGYRVTLREKGVTYVNSF 284
Query: 767 GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 946
G+FV H+IKATN KG+E Y+A KF+IATGERPRYLGI GDKEYCI+SDDLFSLPYCPG
Sbjct: 285 GEFVDLHKIKATNKKGQETFYTASKFVIATGERPRYLGIQGDKEYCITSDDLFSLPYCPG 344
Query: 947 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
TLVVGASYV LECAGFLAG+GLDVTVMVRS+LLRGFDQ+MA K+G ++E+ GVKF R+F
Sbjct: 345 CTLVVGASYVGLECAGFLAGLGLDVTVMVRSVLLRGFDQEMAEKVGSYLEQQGVKFQRKF 404
Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
PI V+Q+E G+PG+L+V AK+T ET+EG YNTVLLAIGRD+CTR IGLE +GV+INE
Sbjct: 405 TPILVQQLEKGLPGKLKVVAKSTEGPETVEGIYNTVLLAIGRDSCTRKIGLEKIGVKINE 464
Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
K GKIPV D EQTNVP+VYAIGDIL+GKPELTP +IQAG+LLA RL+G S + DY N+P
Sbjct: 465 KNGKIPVNDVEQTNVPHVYAIGDILDGKPELTPVAIQAGKLLARRLFGVSLEKCDYINIP 524
Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
TTVFTPLEYG CG SEE A+E +E E+
Sbjct: 525 TTVFTPLEYGCCGLSEEKAIEMYKKENLEV 554
Score = 30.0 bits (66), Expect(2) = e-175
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 1576 YHSLLWPLEWTI 1611
YH+L WPLEWT+
Sbjct: 555 YHTLFWPLEWTV 566
>ref|NP_694802.2| thioredoxin reductase 3 isoform 2 [Mus musculus].
Length = 615
Score = 606 bits (1562), Expect(2) = e-175
Identities = 293/450 (65%), Positives = 356/450 (79%)
Frame = +2
Query: 227 EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
+DG ++ L+E++++ VP +FV + +GG +T +A+Q G LQKLL+ + A +
Sbjct: 74 DDGASVQEVLTEISNQKTVPNIFVNKVHVGGCDRTFQAHQNGLLQKLLQDDSA------H 127
Query: 407 DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
DYDLIII K+VMVLDFV P+P GT WGLGGTCVNVGCIPKKLMH
Sbjct: 128 DYDLIIIGGGSGGLSCAKEAANLGKKVMVLDFVVPSPQGTTWGLGGTCVNVGCIPKKLMH 187
Query: 587 QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
QAALLG AL+D++ YGW + +KH+WE MTEA+Q+HIGSLNWGYRV LREK VTY N++
Sbjct: 188 QAALLGHALQDAKKYGWEYNQQVKHNWEAMTEAIQSHIGSLNWGYRVTLREKGVTYVNSF 247
Query: 767 GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 946
G+FV H+IKATN KG+E Y+A KF+IATGERPRYLGI GDKEYCI+SDDLFSLPYCPG
Sbjct: 248 GEFVDLHKIKATNKKGQETFYTASKFVIATGERPRYLGIQGDKEYCITSDDLFSLPYCPG 307
Query: 947 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
TLVVGASYV LECAGFLAG+GLDVTVMVRS+LLRGFDQ+MA K+G ++E+ GVKF R+F
Sbjct: 308 CTLVVGASYVGLECAGFLAGLGLDVTVMVRSVLLRGFDQEMAEKVGSYLEQQGVKFQRKF 367
Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
PI V+Q+E G+PG+L+V AK+T ET+EG YNTVLLAIGRD+CTR IGLE +GV+INE
Sbjct: 368 TPILVQQLEKGLPGKLKVVAKSTEGPETVEGIYNTVLLAIGRDSCTRKIGLEKIGVKINE 427
Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
K GKIPV D EQTNVP+VYAIGDIL+GKPELTP +IQAG+LLA RL+G S + DY N+P
Sbjct: 428 KNGKIPVNDVEQTNVPHVYAIGDILDGKPELTPVAIQAGKLLARRLFGVSLEKCDYINIP 487
Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
TTVFTPLEYG CG SEE A+E +E E+
Sbjct: 488 TTVFTPLEYGCCGLSEEKAIEMYKKENLEV 517
Score = 30.0 bits (66), Expect(2) = e-175
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 1576 YHSLLWPLEWTI 1611
YH+L WPLEWT+
Sbjct: 518 YHTLFWPLEWTV 529
>ref|NP_038739.2| thioredoxin reductase 2, mitochondrial precursor [Mus musculus].
Length = 527
Score = 411 bits (1057), Expect = e-115
Identities = 209/395 (52%), Positives = 270/395 (68%), Gaps = 1/395 (0%)
Frame = +2
Query: 410 YDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQ 589
+DL++I + K+V V D+V P+P GT+WGLGGTCVNVGCIPKKLMHQ
Sbjct: 43 FDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQ 102
Query: 590 AALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAYG 769
AALLG +RD+ +YGW V + ++H+W+ M EAVQNH+ SLNWG+RV L+++KV Y N
Sbjct: 103 AALLGGMIRDAHHYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKA 162
Query: 770 QFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRY-LGIPGDKEYCISSDDLFSLPYCPG 946
FV H ++ + GK + SAE +IATG RPRY + G EY I+SDD+F L PG
Sbjct: 163 SFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKESPG 222
Query: 947 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
KTLVVGASYVALECAGFL GIGLD TVM+RSI LRGFDQ M++ + EHME HG +F++
Sbjct: 223 KTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKGC 282
Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
VP ++++ +L+VT + S + G ++TVL AIGR TR + LE G+ N
Sbjct: 283 VPSHIKKLPT---NQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNP 339
Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
K KI V +E T+VP++YAIGD+ EG+PELTP +I+AG+LLA RL+G S DY NVP
Sbjct: 340 KNQKIIVDAQEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKSSTLMDYSNVP 399
Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
TTVFTPLEYG G SEE AV G+E E+ Y+
Sbjct: 400 TTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYY 434
>ref|NP_001171530.1| thioredoxin reductase 3 isoform 3 [Mus musculus].
Length = 538
Score = 212 bits (540), Expect(2) = 2e-57
Identities = 106/168 (63%), Positives = 129/168 (76%), Gaps = 6/168 (3%)
Frame = +2
Query: 1091 MEEHGVKFIRQFVP------IKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGR 1252
+ E GV ++ F IKV+Q+E G+PG+L+V AK+T ET+EG YNTVLLAIGR
Sbjct: 273 LREKGVTYVNSFGEFVDLHKIKVQQLEKGLPGKLKVVAKSTEGPETVEGIYNTVLLAIGR 332
Query: 1253 DACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLL 1432
D+CTR IGLE +GV+INEK GKIPV D EQTNVP+VYAIGDIL+GKPELTP +IQAG+LL
Sbjct: 333 DSCTRKIGLEKIGVKINEKNGKIPVNDVEQTNVPHVYAIGDILDGKPELTPVAIQAGKLL 392
Query: 1433 AXRLYGGSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
A RL+G S + DY N+PTTVFTPLEYG CG SEE A+E +E E+
Sbjct: 393 ARRLFGVSLEKCDYINIPTTVFTPLEYGCCGLSEEKAIEMYKKENLEV 440
Score = 30.0 bits (66), Expect(2) = 2e-57
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 1576 YHSLLWPLEWTI 1611
YH+L WPLEWT+
Sbjct: 441 YHTLFWPLEWTV 452
Score = 219 bits (558), Expect = 5e-57
Identities = 104/190 (54%), Positives = 135/190 (71%)
Frame = +2
Query: 227 EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
+DG ++ L+E++++ VP +FV + +GG +T +A+Q G LQKLL+ + A +
Sbjct: 111 DDGASVQEVLTEISNQKTVPNIFVNKVHVGGCDRTFQAHQNGLLQKLLQDDSA------H 164
Query: 407 DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
DYDLIII K+VMVLDFV P+P GT WGLGGTCVNVGCIPKKLMH
Sbjct: 165 DYDLIIIGGGSGGLSCAKEAANLGKKVMVLDFVVPSPQGTTWGLGGTCVNVGCIPKKLMH 224
Query: 587 QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
QAALLG AL+D++ YGW + +KH+WE MTEA+Q+HIGSLNWGYRV LREK VTY N++
Sbjct: 225 QAALLGHALQDAKKYGWEYNQQVKHNWEAMTEAIQSHIGSLNWGYRVTLREKGVTYVNSF 284
Query: 767 GQFVGPHRIK 796
G+FV H+IK
Sbjct: 285 GEFVDLHKIK 294
>ref|NP_001171531.1| thioredoxin reductase 3 isoform 4 [Mus musculus].
Length = 501
Score = 212 bits (540), Expect(2) = 2e-57
Identities = 106/168 (63%), Positives = 129/168 (76%), Gaps = 6/168 (3%)
Frame = +2
Query: 1091 MEEHGVKFIRQFVP------IKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGR 1252
+ E GV ++ F IKV+Q+E G+PG+L+V AK+T ET+EG YNTVLLAIGR
Sbjct: 236 LREKGVTYVNSFGEFVDLHKIKVQQLEKGLPGKLKVVAKSTEGPETVEGIYNTVLLAIGR 295
Query: 1253 DACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLL 1432
D+CTR IGLE +GV+INEK GKIPV D EQTNVP+VYAIGDIL+GKPELTP +IQAG+LL
Sbjct: 296 DSCTRKIGLEKIGVKINEKNGKIPVNDVEQTNVPHVYAIGDILDGKPELTPVAIQAGKLL 355
Query: 1433 AXRLYGGSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
A RL+G S + DY N+PTTVFTPLEYG CG SEE A+E +E E+
Sbjct: 356 ARRLFGVSLEKCDYINIPTTVFTPLEYGCCGLSEEKAIEMYKKENLEV 403
Score = 30.0 bits (66), Expect(2) = 2e-57
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 1576 YHSLLWPLEWTI 1611
YH+L WPLEWT+
Sbjct: 404 YHTLFWPLEWTV 415
Score = 219 bits (558), Expect = 5e-57
Identities = 104/190 (54%), Positives = 135/190 (71%)
Frame = +2
Query: 227 EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
+DG ++ L+E++++ VP +FV + +GG +T +A+Q G LQKLL+ + A +
Sbjct: 74 DDGASVQEVLTEISNQKTVPNIFVNKVHVGGCDRTFQAHQNGLLQKLLQDDSA------H 127
Query: 407 DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
DYDLIII K+VMVLDFV P+P GT WGLGGTCVNVGCIPKKLMH
Sbjct: 128 DYDLIIIGGGSGGLSCAKEAANLGKKVMVLDFVVPSPQGTTWGLGGTCVNVGCIPKKLMH 187
Query: 587 QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
QAALLG AL+D++ YGW + +KH+WE MTEA+Q+HIGSLNWGYRV LREK VTY N++
Sbjct: 188 QAALLGHALQDAKKYGWEYNQQVKHNWEAMTEAIQSHIGSLNWGYRVTLREKGVTYVNSF 247
Query: 767 GQFVGPHRIK 796
G+FV H+IK
Sbjct: 248 GEFVDLHKIK 257
>ref|NP_034474.4| glutathione reductase, mitochondrial precursor [Mus musculus].
Length = 500
Score = 178 bits (452), Expect = 9e-45
Identities = 120/353 (33%), Positives = 190/353 (53%), Gaps = 6/353 (1%)
Frame = +2
Query: 536 LGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNW 715
LGGTCVNVGC+PKK+M A+ + + D +YG+ E K W + + ++ LN
Sbjct: 76 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHVDYGFQSCEG-KFSWHVIKQKRDAYVSRLNT 134
Query: 716 GYRVALREKKVTYENAYGQFV-GPHRIKATNNKGKEKIYSAEKFLIATG---ERPRYLGI 883
Y+ L + + + Y F GP N K ++A LIATG P I
Sbjct: 135 IYQNNLTKSHIEIIHGYATFADGPRPTVEVNGKK----FTAPHILIATGGVPTVPHESQI 190
Query: 884 PGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVR-SILLRGFD 1060
PG I+SD F L P ++++VGA Y+A+E AG L+ +G ++M+R +LR FD
Sbjct: 191 PG-ASLGITSDGFFQLEDLPSRSVIVGAGYIAVEIAGILSALGSKTSLMIRHDKVLRNFD 249
Query: 1061 QDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLL 1240
+++ E +E GV+ ++ +V++ +G+ ++ + T+ + + +L
Sbjct: 250 SLISSNCTEELENAGVEVLKFTQVKEVKKTSSGLELQVVTSVPGRKPTTTMIPDVDCLLW 309
Query: 1241 AIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQA 1420
AIGRD ++ + L VG++ +EK G I V + + TNV VYA+GD+ GK LTP +I A
Sbjct: 310 AIGRDPNSKGLNLNKVGIQTDEK-GHILVDEFQNTNVKGVYAVGDVC-GKALLTPVAIAA 367
Query: 1421 GRLLAXRLYG-GSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
GR LA RL+ + DY+N+PT VF+ G G +E+ AV K G++ +I
Sbjct: 368 GRKLAHRLFECKQDSKLDYDNIPTVVFSHPPIGTVGLTEDEAVHKYGKDNVKI 420
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 54,346,358
Number of extensions: 1472904
Number of successful extensions: 6138
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 6076
Number of HSP's successfully gapped: 17
Length of query: 537
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 431
Effective length of database: 12,433,743
Effective search space: 5358943233
Effective search space used: 5358943233
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003094
(1612 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999319.2| thioredoxin reductase 1, cytoplasmic [Sus scrof... 756 0.0
Alignment gi|XP_003132464.2| PREDICTED: thioredoxin reductase 3 [Sus scro... 612 e-175
Alignment gi|NP_001162173.1| thioredoxin reductase 2, mitochondrial [Sus ... 405 e-113
Alignment gi|XP_003126713.1| PREDICTED: hypothetical protein LOC100520493... 177 1e-44
Alignment gi|XP_003359544.1| PREDICTED: glutathione reductase, mitochondr... 172 6e-43
Alignment gi|XP_003359549.1| PREDICTED: glutathione reductase, mitochondr... 160 2e-39
Alignment gi|XP_003359545.1| PREDICTED: glutathione reductase, mitochondr... 151 9e-37
Alignment gi|NP_999227.1| dihydrolipoyl dehydrogenase, mitochondrial prec... 147 2e-35
Alignment gi|XP_003357560.1| PREDICTED: dihydrolipoyl dehydrogenase, mito... 147 2e-35
Alignment gi|XP_003359546.1| PREDICTED: glutathione reductase, mitochondr... 136 4e-32
>ref|NP_999319.2| thioredoxin reductase 1, cytoplasmic [Sus scrofa].
Length = 499
Score = 756 bits (1951), Expect = 0.0
Identities = 376/406 (92%), Positives = 378/406 (93%)
Frame = +2
Query: 374 MNGAEELPEMYDYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCV 553
MNGAEELPEMYDYDLIII RFNKRVMVLDFVTPTPLGTRWGLGGTCV
Sbjct: 1 MNGAEELPEMYDYDLIIIGGGSGGLAAAKEAARFNKRVMVLDFVTPTPLGTRWGLGGTCV 60
Query: 554 NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL 733
NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL
Sbjct: 61 NVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVAL 120
Query: 734 REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS 913
REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS
Sbjct: 121 REKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISS 180
Query: 914 DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 1093
DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM
Sbjct: 181 DDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHM 240
Query: 1094 EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI 1273
EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI
Sbjct: 241 EEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNI 300
Query: 1274 GLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGG 1453
GLETVGVEINEKTGKIPVTDEEQTNVPYVY IGDILEGKPELTP +IQAGRLLA RLYGG
Sbjct: 301 GLETVGVEINEKTGKIPVTDEEQTNVPYVYTIGDILEGKPELTPVAIQAGRLLAQRLYGG 360
Query: 1454 SHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
S + DYENVPTTVFTPLEYGACG SEE AVEK GEE EI YF
Sbjct: 361 STVKCDYENVPTTVFTPLEYGACGLSEEKAVEKFGEENIEIYHSYF 406
>ref|XP_003132464.2| PREDICTED: thioredoxin reductase 3 [Sus scrofa].
Length = 669
Score = 612 bits (1577), Expect = e-175
Identities = 295/455 (64%), Positives = 361/455 (79%)
Frame = +2
Query: 227 EDGRGLERALSELTSETDVPVVFVKRRKIGGHGQTLKAYQEGRLQKLLKMNGAEELPEMY 406
++G ++ LSELT++ VP +FV + +GG +T +A+Q G LQKLL+ + A Y
Sbjct: 162 DNGASVQEVLSELTNQRTVPNIFVNKVHMGGCDRTFQAHQSGLLQKLLQDDPA------Y 215
Query: 407 DYDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMH 586
DYDLI+I ++V+VLDFV P+P GT WGLGGTCVNVGCIPKKLMH
Sbjct: 216 DYDLIVIGGGSGGLACAQEAAILGRKVLVLDFVVPSPQGTSWGLGGTCVNVGCIPKKLMH 275
Query: 587 QAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAY 766
QAALLGQAL DSR +GW + +KH+W MTEAVQNHIGSLNWGYR++LREK V Y N+Y
Sbjct: 276 QAALLGQALTDSRKFGWEYSQQVKHNWGTMTEAVQNHIGSLNWGYRLSLREKAVAYINSY 335
Query: 767 GQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPG 946
G+FV H+IKATN KG+E Y+A KF+IATGERPRYLGI GDKEYCI+SDDLFSLPYCPG
Sbjct: 336 GEFVEHHKIKATNGKGQETCYTAAKFVIATGERPRYLGIQGDKEYCITSDDLFSLPYCPG 395
Query: 947 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
TLVVGASYVALECAGFLAG+GLDVTVMVRS+LLRGFDQ+MA ++G +ME+HGV+F+R+F
Sbjct: 396 TTLVVGASYVALECAGFLAGLGLDVTVMVRSVLLRGFDQEMAERVGSYMEQHGVRFLRKF 455
Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
VP++V+Q+E G PG+L+V AK+T ETIEG YNTVLLAIGRD+CT+ +GLE +GV+INE
Sbjct: 456 VPVEVQQLEKGSPGKLKVMAKSTEGPETIEGVYNTVLLAIGRDSCTKKMGLEKIGVKINE 515
Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
K+GKIPV D EQTNVPYVYA+GD+LEGKPELTP ++QAG+LLA RL+GG + DY NVP
Sbjct: 516 KSGKIPVNDVEQTNVPYVYAVGDVLEGKPELTPIAVQAGKLLARRLFGGRLEKCDYVNVP 575
Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
T VFTPLEYG CG SEE A+E +E E ++ F
Sbjct: 576 TVVFTPLEYGCCGYSEERAIEVYQKENLEDRVIGF 610
>ref|NP_001162173.1| thioredoxin reductase 2, mitochondrial [Sus scrofa].
Length = 513
Score = 405 bits (1040), Expect = e-113
Identities = 210/395 (53%), Positives = 266/395 (67%), Gaps = 1/395 (0%)
Frame = +2
Query: 410 YDLIIIXXXXXXXXXXXXXXRFNKRVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQ 589
YDL++I + K+V V+D+V+P+P GTRWGLGGTCVNVGCIPKKLMHQ
Sbjct: 31 YDLLVIGGGSGGLACAKEAAQLGKKVAVVDYVSPSPRGTRWGLGGTCVNVGCIPKKLMHQ 90
Query: 590 AALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAYG 769
AALLG +RD+ +YGW V + H W +M EAVQNH+ SLNWG+RV L+++KV Y N
Sbjct: 91 AALLGGVIRDAPHYGWEVVQPALHSWRKMAEAVQNHVKSLNWGHRVQLQDRKVKYFNFKA 150
Query: 770 QFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRY-LGIPGDKEYCISSDDLFSLPYCPG 946
FV H + + GKE + SAE +IATG RPRY I G EY I+SDD+F L PG
Sbjct: 151 SFVNKHTVCGVSKGGKEILLSAEHIVIATGGRPRYPAHIEGAVEYGITSDDIFWLKESPG 210
Query: 947 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQDMANKIGEHMEEHGVKFIRQF 1126
KTLVVGASYVALECAGFL G+GLD T+M+RSI LR FDQ MA+ + EHM HG + ++
Sbjct: 211 KTLVVGASYVALECAGFLTGLGLDATIMIRSIPLRAFDQQMASLVIEHMAVHGTRILKGC 270
Query: 1127 VPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAIGRDACTRNIGLETVGVEINE 1306
+P++VE++ G+L+VT SD G ++TVL A GR ++ LE GV N
Sbjct: 271 MPLRVEKLP---DGQLQVTWVDLASDRKDVGTFDTVLWATGRVPEIGSLNLEKAGVHTNP 327
Query: 1307 KTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGRLLAXRLYGGSHCQYDYENVP 1486
T KI V ++ T+VP++YAIGD+ EG+PELTP ++ AGRLLA RL G S DY+NVP
Sbjct: 328 HTQKILVDAQDATSVPHIYAIGDVAEGRPELTPTAVMAGRLLAQRLCGRSSDLMDYDNVP 387
Query: 1487 TTVFTPLEYGACGXSEEXAVEKLGEEKYEITIVYF 1591
TTVFTPLEYG G SEE AV + GEE E+ Y+
Sbjct: 388 TTVFTPLEYGCVGLSEEAAVARHGEEGVEVYHAYY 422
>ref|XP_003126713.1| PREDICTED: hypothetical protein LOC100520493 [Sus scrofa].
Length = 121
Score = 177 bits (449), Expect = 1e-44
Identities = 85/112 (75%), Positives = 89/112 (79%), Gaps = 2/112 (1%)
Frame = +1
Query: 31 LWEPASLSLQ--SSPVPHCIXXXXXXXXXXXXCCPTARVRVSFGLTKNGGSPGPPGCENP 204
LW+ + ++ SSPVPHCI CCPTARVRVSFGLTKNGGSPGPPGCENP
Sbjct: 9 LWDHRVVVIECLSSPVPHCIGSRGGGARQRGACCPTARVRVSFGLTKNGGSPGPPGCENP 68
Query: 205 GPRASACRGRAGPRESALRTDLGNRRARCVCEAAKDRRPWSNPEGLSGGQTS 360
GPRASACRGRAGPRESALRTDLGNRRARCVCEAAKDRRPWSNPEG TS
Sbjct: 69 GPRASACRGRAGPRESALRTDLGNRRARCVCEAAKDRRPWSNPEGRWASFTS 120
>ref|XP_003359544.1| PREDICTED: glutathione reductase, mitochondrial-like isoform 1 [Sus
scrofa].
Length = 519
Score = 172 bits (435), Expect = 6e-43
Identities = 124/361 (34%), Positives = 194/361 (53%), Gaps = 14/361 (3%)
Frame = +2
Query: 536 LGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNW 715
LGGTCVNVGC+PKK+M A+ + + D +YG+ E+ K +W + E ++ LN
Sbjct: 95 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHVDYGFQSCES-KFNWRVIKEKRDAYVSRLNT 153
Query: 716 GYRVALREKKVTYENAYGQFVG-PHRIKATNNKGKEKIYSAEKFLIATG---ERPRYLGI 883
Y+ L + + + + F P N K Y+A LIATG P I
Sbjct: 154 IYQNNLTKSHIEIIHGHAAFTSDPQPTVEVNGKK----YTAPHILIATGGVPSVPPESQI 209
Query: 884 PGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVR-SILLRGFD 1060
PG I+SD F L P ++++VGA Y+A+E AG L+ +G ++M+R +LR FD
Sbjct: 210 PG-ASLGITSDGFFQLEELPSRSVIVGAGYIAVEIAGILSALGSKTSLMIRHDKVLRSFD 268
Query: 1061 QDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGM--------PGRLRVTAKATNSDETIE 1216
+++ E +E G++ ++ +V++ +G+ PGR K T S TI
Sbjct: 269 SIISSNCTEELENAGIEVLKYSQVKEVKKTSSGLELCMVTSVPGR-----KPTFS--TIS 321
Query: 1217 GEYNTVLLAIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPE 1396
G + +L AIGRD +R + L +G++ ++K G I V + + TNV +YA+GD+ G+
Sbjct: 322 G-VDCLLWAIGRDPNSRGLNLSQLGIQTDDK-GHIIVDEFQNTNVKGIYAVGDVC-GRAL 378
Query: 1397 LTPGSIQAGRLLAXRLYG-GSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYE 1573
LTP +I AGR LA RL+ + DY+N+PT VF+ G G +E+ A+ K G+E +
Sbjct: 379 LTPVAIAAGRKLAHRLFECKEDSKLDYDNIPTVVFSHPPIGTVGLTEDEAICKYGKENVK 438
Query: 1574 I 1576
I
Sbjct: 439 I 439
>ref|XP_003359549.1| PREDICTED: glutathione reductase, mitochondrial [Sus scrofa].
Length = 524
Score = 160 bits (405), Expect = 2e-39
Identities = 118/355 (33%), Positives = 189/355 (53%), Gaps = 13/355 (3%)
Frame = +2
Query: 551 VNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNWGYRVA 730
VNVGC+PKK+M A+ + + D +YG+ E+ K +W + E ++ LN Y+
Sbjct: 105 VNVGCVPKKVMWNTAVHSEFMHDHVDYGFQSCES-KFNWRVIKEKRDAYVSRLNTIYQNN 163
Query: 731 LREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRY---LGIPGDKEY 901
L + + + + F + N K Y+A LIATG P IPG
Sbjct: 164 LTKSHIEIIHGHAAFTSDPQPTVEVNGKK---YTAPHILIATGGVPSVPPESQIPG-ASL 219
Query: 902 CISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVR-SILLRGFDQDMANK 1078
I+SD F L P ++++VGA Y+A+E AG L+ +G ++M+R +LR FD +++
Sbjct: 220 GITSDGFFQLEELPSRSVIVGAGYIAVEIAGILSALGSKTSLMIRHDKVLRSFDSIISSN 279
Query: 1079 IGEHMEEHGVKFIRQFVPIKVEQIEAGM--------PGRLRVTAKATNSDETIEGEYNTV 1234
E +E G++ ++ +V++ +G+ PGR K T S TI G + +
Sbjct: 280 CTEELENAGIEVLKYSQVKEVKKTSSGLELCMVTSVPGR-----KPTFS--TISG-VDCL 331
Query: 1235 LLAIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSI 1414
L AIGRD +R + L +G++ ++K G I V + + TNV +YA+GD+ G+ LTP +I
Sbjct: 332 LWAIGRDPNSRGLNLSQLGIQTDDK-GHIIVDEFQNTNVKGIYAVGDVC-GRALLTPVAI 389
Query: 1415 QAGRLLAXRLYG-GSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
AGR LA RL+ + DY+N+PT VF+ G G +E+ A+ K G+E +I
Sbjct: 390 AAGRKLAHRLFECKEDSKLDYDNIPTVVFSHPPIGTVGLTEDEAICKYGKENVKI 444
>ref|XP_003359545.1| PREDICTED: glutathione reductase, mitochondrial-like isoform 2 [Sus
scrofa].
Length = 490
Score = 151 bits (382), Expect = 9e-37
Identities = 116/351 (33%), Positives = 180/351 (51%), Gaps = 4/351 (1%)
Frame = +2
Query: 536 LGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNW 715
LGGTCVNVGC+PKK+M A+ + + D +YG+ E+ K +W + E ++ LN
Sbjct: 95 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHVDYGFQSCES-KFNWRVIKEKRDAYVSRLNT 153
Query: 716 GYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATGERPRY---LGIP 886
Y+ L + + + + F + N K Y+A LIATG P IP
Sbjct: 154 IYQNNLTKSHIEIIHGHAAFTSDPQPTVEVNGKK---YTAPHILIATGGVPSVPPESQIP 210
Query: 887 GDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRGFDQD 1066
G I+SD F L P ++++VGA Y+A+E AG L+ +G ++M+R D
Sbjct: 211 G-ASLGITSDGFFQLEELPSRSVIVGAGYIAVEIAGILSALGSKTSLMIR--------HD 261
Query: 1067 MANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLLAI 1246
++ + G++ + +PGR K T S TI G + +L AI
Sbjct: 262 KVKEVKK--TSSGLELC----------MVTSVPGR-----KPTFS--TISG-VDCLLWAI 301
Query: 1247 GRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQAGR 1426
GRD +R + L +G++ ++K G I V + + TNV +YA+GD+ G+ LTP +I AGR
Sbjct: 302 GRDPNSRGLNLSQLGIQTDDK-GHIIVDEFQNTNVKGIYAVGDVC-GRALLTPVAIAAGR 359
Query: 1427 LLAXRLYGGSH-CQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
LA RL+ + DY+N+PT VF+ G G +E+ A+ K G+E +I
Sbjct: 360 KLAHRLFECKEDSKLDYDNIPTVVFSHPPIGTVGLTEDEAICKYGKENVKI 410
>ref|NP_999227.1| dihydrolipoyl dehydrogenase, mitochondrial precursor [Sus scrofa].
Length = 509
Score = 147 bits (371), Expect = 2e-35
Identities = 105/344 (30%), Positives = 175/344 (50%), Gaps = 5/344 (1%)
Frame = +2
Query: 536 LGGTCVNVGCIPKK-LMHQAALLGQAL-RDSRNYGWNVEETIKHDWERMTEAVQNHIGSL 709
LGGTC+NVGCIP K L++ + A +D + G + E ++ + E+M E N + +L
Sbjct: 76 LGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSE-VRLNLEKMMEQKSNAVKAL 134
Query: 710 NWGYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATG-ERPRYLGIP 886
G ++ KV N YG+ G +++ AT G ++ + + LIATG E + GI
Sbjct: 135 TGGIAHLFKQNKVVRVNGYGKITGKNQVTATKADGSTEVINTKNILIATGSEVTPFPGIT 194
Query: 887 GDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTV--MVRSILLRGFD 1060
D++ +SS SL P K +V+GA + +E +G DVT ++ + G D
Sbjct: 195 IDEDTVVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVELLGHVGGIGID 254
Query: 1061 QDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLL 1240
+++ +++ G KF + KV G + V+ +A + + + +L+
Sbjct: 255 MEVSKNFQRILQKQGFKF---KLNTKVIGATKKSDGNIDVSIEAASGGKAEVITCDVLLV 311
Query: 1241 AIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQA 1420
IGR T+N+GLE +G+E++ + G+IPV QT +P +YAIGD++ G P L +
Sbjct: 312 CIGRRPFTQNLGLEELGIELDPR-GRIPVNTRFQTKIPNIYAIGDVVAG-PMLAHKAEDE 369
Query: 1421 GRLLAXRLYGGSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEK 1552
G + + GG+ DY VP+ ++T E G SEE E+
Sbjct: 370 GIICVEGMAGGA-VHIDYNCVPSVIYTHPEVAWVGKSEEQLKEE 412
>ref|XP_003357560.1| PREDICTED: dihydrolipoyl dehydrogenase, mitochondrial-like [Sus
scrofa].
Length = 509
Score = 147 bits (370), Expect = 2e-35
Identities = 105/344 (30%), Positives = 175/344 (50%), Gaps = 5/344 (1%)
Frame = +2
Query: 536 LGGTCVNVGCIPKK-LMHQAALLGQAL-RDSRNYGWNVEETIKHDWERMTEAVQNHIGSL 709
LGGTC+NVGCIP K L++ + A +D + G + E ++ + E+M E N + +L
Sbjct: 76 LGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSE-VRLNLEKMMEQKSNAVKAL 134
Query: 710 NWGYRVALREKKVTYENAYGQFVGPHRIKATNNKGKEKIYSAEKFLIATG-ERPRYLGIP 886
G ++ KV N YG+ G +++ AT G ++ + + LIATG E + GI
Sbjct: 135 TGGIAHLFKQNKVVRVNGYGKITGKNQVTATKADGSTEVINTKNILIATGSEVTPFPGIT 194
Query: 887 GDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM--VRSILLRGFD 1060
D++ +SS SL P K +V+GA + +E +G DVT + + + G D
Sbjct: 195 IDEDTVVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGIGID 254
Query: 1061 QDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLL 1240
+++ +++ G KF + KV G + V+ +A + + + +L+
Sbjct: 255 MEVSKNFQRILQKQGFKF---KLNTKVIGATKKSDGNIDVSIEAASGGKAEVITCDVLLV 311
Query: 1241 AIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQA 1420
IGR T+N+GLE +G+E++ + G+IPV QT +P +YAIGD++ G P L +
Sbjct: 312 CIGRRPFTQNLGLEELGIELDPR-GRIPVNTRFQTKIPNIYAIGDVVAG-PMLAHKAEDE 369
Query: 1421 GRLLAXRLYGGSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEK 1552
G + + GG+ DY VP+ ++T E G SEE E+
Sbjct: 370 GIICVEGMAGGA-VHIDYNCVPSVIYTHPEVAWVGKSEEQLKEE 412
>ref|XP_003359546.1| PREDICTED: glutathione reductase, mitochondrial-like isoform 3 [Sus
scrofa].
Length = 466
Score = 136 bits (342), Expect = 4e-32
Identities = 105/353 (29%), Positives = 165/353 (46%), Gaps = 6/353 (1%)
Frame = +2
Query: 536 LGGTCVNVGCIPKKLMHQAALLGQALRDSRNYGWNVEETIKHDWERMTEAVQNHIGSLNW 715
LGGTCVNVGC+PKK+M A+ + + D +YG+ E+ K +W + E ++ LN
Sbjct: 95 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHVDYGFQSCES-KFNWRVIKEKRDAYVSRLNT 153
Query: 716 GYRVALREKKVTYENAYGQFVG-PHRIKATNNKGKEKIYSAEKFLIATG---ERPRYLGI 883
Y+ L + + + + F P N K Y+A LIATG P I
Sbjct: 154 IYQNNLTKSHIEIIHGHAAFTSDPQPTVEVNGKK----YTAPHILIATGGVPSVPPESQI 209
Query: 884 PGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVR-SILLRGFD 1060
PG I+SD F L P ++++VGA Y+A+E AG L+ +G ++M+R +LR FD
Sbjct: 210 PG-ASLGITSDGFFQLEELPSRSVIVGAGYIAVEIAGILSALGSKTSLMIRHDKVLRSFD 268
Query: 1061 QDMANKIGEHMEEHGVKFIRQFVPIKVEQIEAGMPGRLRVTAKATNSDETIEGEYNTVLL 1240
+++ E +E G++ ++
Sbjct: 269 SIISSNCTEELENAGIEVLKY--------------------------------------- 289
Query: 1241 AIGRDACTRNIGLETVGVEINEKTGKIPVTDEEQTNVPYVYAIGDILEGKPELTPGSIQA 1420
+ G++T + G I V + + TNV +YA+GD+ G+ LTP +I A
Sbjct: 290 ---------SQGIQT------DDKGHIIVDEFQNTNVKGIYAVGDVC-GRALLTPVAIAA 333
Query: 1421 GRLLAXRLYG-GSHCQYDYENVPTTVFTPLEYGACGXSEEXAVEKLGEEKYEI 1576
GR LA RL+ + DY+N+PT VF+ G G +E+ A+ K G+E +I
Sbjct: 334 GRKLAHRLFECKEDSKLDYDNIPTVVFSHPPIGTVGLTEDEAICKYGKENVKI 386
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 40,300,271
Number of extensions: 1111825
Number of successful extensions: 5300
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 5232
Number of HSP's successfully gapped: 13
Length of query: 537
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 433
Effective length of database: 8,754,644
Effective search space: 3790760852
Effective search space used: 3790760852
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-003094
(1612 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr05 450 e-123
Sscrofa_Chr13 72 1e-09
>Sscrofa_Chr05
|| Length = 111506441
Score = 450 bits (227), Expect = e-123
Identities = 227/227 (100%)
Strand = Plus / Minus
Query: 1 cattcaggggagggcgtggcttctccgagcctctgggaaccggcctccctttcccttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83804505 cattcaggggagggcgtggcttctccgagcctctgggaaccggcctccctttcccttcag 83804446
Query: 61 tcgtctccggtcccgcattgcatcggatcgcgaggtggtggggcgcgtcagagaggcgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83804445 tcgtctccggtcccgcattgcatcggatcgcgaggtggtggggcgcgtcagagaggcgcc 83804386
Query: 121 tgctgcccaacagctcgcgttcgtgtaagcttcgggctcaccaaaaacggaggaagcccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83804385 tgctgcccaacagctcgcgttcgtgtaagcttcgggctcaccaaaaacggaggaagcccc 83804326
Query: 181 gggcctcccggctgcgagaaccccgggccgagagcatccgcctgccg 227
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83804325 gggcctcccggctgcgagaaccccgggccgagagcatccgcctgccg 83804279
Score = 412 bits (208), Expect = e-112
Identities = 222/224 (99%), Gaps = 2/224 (0%)
Strand = Plus / Plus
Query: 910 cagtgatgatcttttctctttaccttattgcccgggtaagaccctggtggtcggagcatc 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83671705 cagtgatgatcttttctctttaccttattgcccgggtaagaccctggtggtcggagcatc 83671764
Query: 970 ctatgtcgctttggaatgtgctggatttcttgccggcatcggtttagatgtcactgttat 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83671765 ctatgtcgctttggaatgtgctggatttcttgccggcatcggtttagatgtcactgttat 83671824
Query: 1030 ggtacggtccattctcctgagaggatttgaccaggacatggccaacaaaatcggtgaaca 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83671825 ggtacggtccattctcctgagaggatttgaccaggacatggccaacaaaatcggtgaaca 83671884
Query: 1090 tatggaagaacac-ggtgtcaagtttataagacagtttgtacca 1132
||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 83671885 tatggaagaacacgggtgtc-agtttataagacagtttgtacca 83671927
Score = 285 bits (144), Expect = 4e-74
Identities = 144/144 (100%)
Strand = Plus / Plus
Query: 654 ttaaacacgactgggaaagaatgacagaagctgtgcagaatcacattggctctctgaact 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83669775 ttaaacacgactgggaaagaatgacagaagctgtgcagaatcacattggctctctgaact 83669834
Query: 714 ggggctaccgcgtggctctgcgggagaaaaaagtcacttatgagaatgcctatgggcagt 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83669835 ggggctaccgcgtggctctgcgggagaaaaaagtcacttatgagaatgcctatgggcagt 83669894
Query: 774 ttgttgggcctcacagaattaagg 797
||||||||||||||||||||||||
Sbjct: 83669895 ttgttgggcctcacagaattaagg 83669918
Score = 258 bits (130), Expect = 8e-66
Identities = 146/149 (97%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 1309 gactggaaaaatacctgtgacggatgaagagcagactaatgtgccttatgtctatgccat 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83677513 gactggaaaaatacctgtgacggatgaagagcagactaatgtgccttatgtctatgccat 83677572
Query: 1369 tggtgatatattggaggggaagccagagctcacccccggtagc-atccaggcaggaaggt 1427
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 83677573 tggtgatatattggaggggaagccagagctca-ccccggtagcaatccaggcaggaaggt 83677631
Query: 1428 tgctggcacanaggctgtatggtggctcc 1456
|||||||||| ||||||||||||||||||
Sbjct: 83677632 tgctggcacagaggctgtatggtggctcc 83677660
Score = 250 bits (126), Expect = 2e-63
Identities = 126/126 (100%)
Strand = Plus / Plus
Query: 336 aggcttatcaggagggcagacttcaaaagctactgaaaatgaatggtgctgaggagcttc 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83657826 aggcttatcaggagggcagacttcaaaagctactgaaaatgaatggtgctgaggagcttc 83657885
Query: 396 ccgagatgtatgactatgacctcatcatcattggagggggctcaggaggcctggcggctg 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83657886 ccgagatgtatgactatgacctcatcatcattggagggggctcaggaggcctggcggctg 83657945
Query: 456 ctaagg 461
||||||
Sbjct: 83657946 ctaagg 83657951
Score = 240 bits (121), Expect = 2e-60
Identities = 121/121 (100%)
Strand = Plus / Plus
Query: 533 ggtctcggaggaacgtgtgtgaatgtaggttgcatacctaaaaaactgatgcaccaagca 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83661957 ggtctcggaggaacgtgtgtgaatgtaggttgcatacctaaaaaactgatgcaccaagca 83662016
Query: 593 gctttgttaggacaagccctacgagactctcgaaactatgggtggaacgtcgaggagacg 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83662017 gctttgttaggacaagccctacgagactctcgaaactatgggtggaacgtcgaggagacg 83662076
Query: 653 a 653
|
Sbjct: 83662077 a 83662077
Score = 234 bits (118), Expect = 1e-58
Identities = 118/118 (100%)
Strand = Plus / Plus
Query: 795 aggcaacaaataacaaaggcaaagaaaaaatttattcagcagagaaatttctcattgcca 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83670302 aggcaacaaataacaaaggcaaagaaaaaatttattcagcagagaaatttctcattgcca 83670361
Query: 855 ctggtgaaaggccacgctatttgggtatccctggtgacaaagagtactgcatcagcag 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83670362 ctggtgaaaggccacgctatttgggtatccctggtgacaaagagtactgcatcagcag 83670419
Score = 222 bits (112), Expect = 5e-55
Identities = 112/112 (100%)
Strand = Plus / Minus
Query: 227 gaggacgggcggggcctcgagagagcgctctccgaactgacctcggaaaccgacgtgccc 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83802906 gaggacgggcggggcctcgagagagcgctctccgaactgacctcggaaaccgacgtgccc 83802847
Query: 287 gttgtgtttgtgaagcggcgaaagataggcggccatggtcaaaccctgaagg 338
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83802846 gttgtgtttgtgaagcggcgaaagataggcggccatggtcaaaccctgaagg 83802795
Score = 190 bits (96), Expect = 2e-45
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 1139 gttgaacaaatcgaagcagggatgccaggccgactcagggtgacagctaaggccactaac 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83674489 gttgaacaaatcgaagcagggatgccaggccgactcagggtgacagctaaggccactaac 83674548
Query: 1199 agtgacgaaaccatcgaaggagagtataatacggta 1234
||||||||||||||||||||||||||||||||||||
Sbjct: 83674549 agtgacgaaaccatcgaaggagagtataatacggta 83674584
Score = 165 bits (83), Expect = 9e-38
Identities = 98/104 (94%)
Strand = Plus / Plus
Query: 1463 cagtatgactatgaaaacgttccaacgaccgtttttactcctttggaatatggtgcttgt 1522
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83684739 cagtgtgactatgaaaacgttccaacgaccgtttttactcctttggaatatggtgcttgt 83684798
Query: 1523 ggtncttccgaagagnangctgtggagaaattgggggaagaaaa 1566
||| |||||||||| | |||||||||||||| |||||||||||
Sbjct: 83684799 ggtctttccgaagagaaggctgtggagaaatttggggaagaaaa 83684842
Score = 153 bits (77), Expect = 4e-34
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 459 aggaagcagccagatttaacaagcgggtcatggtcctggattttgtcactccaacccctc 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83659442 aggaagcagccagatttaacaagcgggtcatggtcctggattttgtcactccaacccctc 83659501
Query: 519 tcggaactagatggggt 535
|||||||||||||||||
Sbjct: 83659502 tcggaactagatggggt 83659518
Score = 149 bits (75), Expect = 6e-33
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 1231 ggtattgctggcaataggaagagatgcttgcacaaggaacattggcttagaaactgtggg 1290
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 83675161 ggtattgctggcaataggaagagatgcttgcacaagaaacattggcttagaaactgtggg 83675220
Query: 1291 ggtagagataaacgaaaag 1309
|||||||||||||||||||
Sbjct: 83675221 ggtagagataaacgaaaag 83675239
>Sscrofa_Chr13
|| Length = 218635234
Score = 71.9 bits (36), Expect = 1e-09
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 674 atgacagaagctgtgcagaatcacattggctctctgaactggggctaccgcgtggctctg 733
|||||||| || || ||||| ||||||||||| ||||||||||||||||| || |||||
Sbjct: 80693865 atgacagaggccgtccagaaccacattggctccctgaactggggctaccggctgtctctg 80693806
Query: 734 cgggagaa 741
||||||||
Sbjct: 80693805 cgggagaa 80693798
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 43,389,845
Number of extensions: 281
Number of successful extensions: 281
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 279
Number of HSP's successfully gapped: 13
Length of query: 1612
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1590
Effective length of database: 2,808,408,574
Effective search space: 4465369632660
Effective search space used: 4465369632660
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)