Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008692
(1006 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001071617.1| glutathione S-transferase A1 [Bos taurus]. 371 e-103
Alignment gi|NP_001092486.1| glutathione S-transferase A5 [Bos taurus]. 339 3e-93
Alignment gi|NP_803481.1| glutathione S-transferase A2 [Bos taurus]. 336 2e-92
Alignment gi|NP_001070580.1| glutathione S-transferase A4 [Bos taurus]. 262 4e-70
Alignment gi|NP_001015651.1| glutathione S-transferase A4 [Bos taurus]. 248 6e-66
Alignment gi|NP_803482.1| glutathione S-transferase P [Bos taurus]. 88 1e-17
Alignment gi|XP_002699444.1| PREDICTED: glutathione S-transferase, pi 1-l... 84 2e-16
Alignment gi|XP_604297.3| PREDICTED: glutathione S-transferase, pi 1-like... 84 2e-16
Alignment gi|XP_002688181.1| PREDICTED: prostaglandin D2 synthase, hemato... 67 2e-11
Alignment gi|NP_001040025.1| glutathione S-transferase mu 3 [Bos taurus]. 63 5e-10
>ref|NP_001071617.1| glutathione S-transferase A1 [Bos taurus].
Length = 222
Score = 371 bits (953), Expect = e-103
Identities = 183/221 (82%), Positives = 195/221 (88%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MAGKP LHYFNGRGRMECIRWLLAAAGVEFEEKFI+ PEDLDKL NDGSL+FQQVPMVEI
Sbjct: 1 MAGKPTLHYFNGRGRMECIRWLLAAAGVEFEEKFIEKPEDLDKLKNDGSLMFQQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKLVQTRAILNYIATKYNLYGKD KERALIDMY+EGVADLGEMI+ PLCPP EKDAK
Sbjct: 61 DGMKLVQTRAILNYIATKYNLYGKDMKERALIDMYSEGVADLGEMIMHFPLCPPAEKDAK 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
+ I+EK+TNRYLPAFE VLKSHGQDYLVGNKLSRADI DPSLLANFPL
Sbjct: 121 LTLIREKTTNRYLPAFENVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDPSLLANFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFR 732
LKALK RVSN+P VKKFLQPGSQRKPP DEKK+EEA+ +F+
Sbjct: 181 LKALKARVSNIPAVKKFLQPGSQRKPPTDEKKIEEARKVFK 221
>ref|NP_001092486.1| glutathione S-transferase A5 [Bos taurus].
Length = 222
Score = 339 bits (869), Expect = 3e-93
Identities = 171/221 (77%), Positives = 187/221 (84%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MAGKP LHYF+ RGRME IRWLLAAAG EFEEK I++ EDLDKL DGSL+FQQVPMVEI
Sbjct: 1 MAGKPKLHYFDARGRMEAIRWLLAAAGAEFEEKLIESSEDLDKLRYDGSLVFQQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKLVQTRAILNYIATKY+LYGKD KERALIDMYTEGVADLGEMI+LLPLCPP++K+ K
Sbjct: 61 DGMKLVQTRAILNYIATKYDLYGKDMKERALIDMYTEGVADLGEMIMLLPLCPPDQKNTK 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
+ I+E++TNRYLPAFE VLKSH QDYLVGNKLS+ADI DPSLLANFPL
Sbjct: 121 LTLIQERATNRYLPAFENVLKSHRQDYLVGNKLSKADIHLVELLYYVEELDPSLLANFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFR 732
LK LKTRVSNLP VKKFLQPGSQRK P EK LE A+ IF+
Sbjct: 181 LKGLKTRVSNLPAVKKFLQPGSQRKLPGGEKSLERARKIFK 221
>ref|NP_803481.1| glutathione S-transferase A2 [Bos taurus].
Length = 222
Score = 336 bits (862), Expect = 2e-92
Identities = 169/223 (75%), Positives = 185/223 (82%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MAGKP LHYFNGRGRMECIRWLLAAAGVEFEEKFI+ PEDLDKL NDGSL+FQQVPMVEI
Sbjct: 1 MAGKPKLHYFNGRGRMECIRWLLAAAGVEFEEKFIEQPEDLDKLRNDGSLMFQQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGM + + + +LYGKD KERALIDMY+EGV DLGEMI+ LPLCPP++KDAK
Sbjct: 61 DGMSWCRPEPF-STTCHQIHLYGKDMKERALIDMYSEGVEDLGEMIMHLPLCPPDQKDAK 119
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
+A IKE++TNRY PAFEKVLK+HGQDYLVGNKLS+ADI DPSLLANFPL
Sbjct: 120 IAQIKERTTNRYFPAFEKVLKNHGQDYLVGNKLSKADIHLVELLYYVEELDPSLLANFPL 179
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFRIK 738
LK LK RVS+LP VKKFLQPGSQRKPPMDEK LEEAK IFRIK
Sbjct: 180 LKGLKARVSSLPAVKKFLQPGSQRKPPMDEKNLEEAKRIFRIK 222
>ref|NP_001070580.1| glutathione S-transferase A4 [Bos taurus].
Length = 222
Score = 262 bits (669), Expect = 4e-70
Identities = 131/221 (59%), Positives = 159/221 (71%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MA KP L YF+GRGRME IRWLLAAAGVEFEE+F++T E +KL DG LLF QVP+VEI
Sbjct: 1 MAAKPKLWYFHGRGRMESIRWLLAAAGVEFEEEFLETREQYEKLQKDGRLLFGQVPLVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGM+L QTRAIL+Y+A KYNL+GKD KE IDMY +G DL M+ L P EK+
Sbjct: 61 DGMELTQTRAILSYLAAKYNLHGKDLKETVRIDMYADGTLDLMLMVALAAFKHPEEKEES 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
+A +K+ RY P FEK+LK HG+D+LVGNK S ADIQ D S+L++FPL
Sbjct: 121 LALAVKKAKTRYFPVFEKILKDHGEDFLVGNKFSWADIQLLEVILTMEELDASVLSDFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFR 732
LK KTR+SN+PT+KKFLQPGSQRKPP D +E +NI +
Sbjct: 181 LKEFKTRISNIPTIKKFLQPGSQRKPPPDSHYVEVVRNILQ 221
>ref|NP_001015651.1| glutathione S-transferase A4 [Bos taurus].
Length = 222
Score = 248 bits (633), Expect = 6e-66
Identities = 122/220 (55%), Positives = 162/220 (73%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MA KP LHY NGRGRME +RW+LAAAGVEF+E+F++T E L KL + LLFQQVPMVEI
Sbjct: 1 MATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKLVQTR+IL+YIA K++L+GKD KER LIDMY EG DL E++++ P P+++ +
Sbjct: 61 DGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKE 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
VA++ +K+ RY P FEKVL+ HGQ +LVGN+LS ADI P++L+ FP
Sbjct: 121 VANMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIF 729
L+ ++SN+PT+KKFL+PGS++KPP D+ + NIF
Sbjct: 181 LQEYTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 220
>ref|NP_803482.1| glutathione S-transferase P [Bos taurus].
Length = 210
Score = 88.2 bits (217), Expect = 1e-17
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 2/203 (0%)
Frame = +1
Query: 94 YFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEIDGMKLVQT 273
YF +GR E +R LLA G ++E+ + L S L+ Q+P + + L Q+
Sbjct: 8 YFPVQGRCEAMRMLLADQGQSWKEEVVAMQSWLQGPLK-ASCLYGQLPKFQDGDLTLYQS 66
Query: 274 RAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAKVASIKEKS 453
AIL ++ LYGKD +E AL+DM +GV DL + L N + K + K+
Sbjct: 67 NAILRHLGRTLGLYGKDQQEAALVDMVNDGVEDL--RCKYVSLIYTNYEAGKEDYV--KA 122
Query: 454 TNRYLPAFEKVLKSH--GQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPLLKALKT 627
++L FE +L + GQ ++VG+++S AD PS L +FPLL A
Sbjct: 123 LPQHLKPFETLLSQNKGGQAFIVGDQISFADYNLLDLLRIHQVLAPSCLDSFPLLSAYVA 182
Query: 628 RVSNLPTVKKFLQPGSQRKPPMD 696
R+++ P +K FL P++
Sbjct: 183 RLNSRPKLKAFLASPEHMNRPIN 205
>ref|XP_002699444.1| PREDICTED: glutathione S-transferase, pi 1-like [Bos taurus].
Length = 231
Score = 84.0 bits (206), Expect = 2e-16
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 7/212 (3%)
Frame = +1
Query: 94 YFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEIDGMKLVQT 273
YF RGR E +R LLA ++E+ + T E + S L+ Q+P + + L Q+
Sbjct: 29 YFPTRGRCEALRMLLADQDQSWKEEVV-TKESWLQGPLKASCLYGQLPKFQDGDLTLYQS 87
Query: 274 RAILNYIATKYNLYGKDAKERALIDMYTEGVADL----GEMILLLPLCPPNEKDAKVASI 441
AIL ++ + LYG D +E AL+DM +G+ DL G +I ++ K +
Sbjct: 88 NAILRHLGRSFGLYGTDEREAALVDMVNDGLEDLRRHCGHLI------HHKREEDKAQYV 141
Query: 442 KEKSTNRYLPAFEKVLKSH--GQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPLLK 615
+E +L FE +L + GQ ++VG+++S AD P L FPLL
Sbjct: 142 QELPV--HLQPFETLLSQNQGGQAFIVGDQISFADYNLLDLLLNHQVLVPGCLDPFPLLS 199
Query: 616 ALKTRVSNLPTVKKFL-QPGSQRKPPMDEKKL 708
A R+S P +K FL P +P +K+
Sbjct: 200 AYVARLSARPKLKAFLASPEHVNRPIFGSRKI 231
>ref|XP_604297.3| PREDICTED: glutathione S-transferase, pi 1-like [Bos taurus].
Length = 231
Score = 84.0 bits (206), Expect = 2e-16
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 7/212 (3%)
Frame = +1
Query: 94 YFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEIDGMKLVQT 273
YF RGR E +R LLA ++E+ + T E + S L+ Q+P + + L Q+
Sbjct: 29 YFPTRGRCEALRMLLADQDQSWKEEVV-TKESWLQGPLKASCLYGQLPKFQDGDLTLYQS 87
Query: 274 RAILNYIATKYNLYGKDAKERALIDMYTEGVADL----GEMILLLPLCPPNEKDAKVASI 441
AIL ++ + LYG D +E AL+DM +G+ DL G +I ++ K +
Sbjct: 88 NAILRHLGRSFGLYGTDEREAALVDMVNDGLEDLRRHCGHLI------HHKREEDKAQYV 141
Query: 442 KEKSTNRYLPAFEKVLKSH--GQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPLLK 615
+E +L FE +L + GQ ++VG+++S AD P L FPLL
Sbjct: 142 QELPV--HLQPFETLLSQNQGGQAFIVGDQISFADYNLLDLLLNHQVLVPGCLDPFPLLS 199
Query: 616 ALKTRVSNLPTVKKFL-QPGSQRKPPMDEKKL 708
A R+S P +K FL P +P +K+
Sbjct: 200 AYVARLSARPKLKAFLASPEHVNRPIFGSRKI 231
>ref|XP_002688181.1| PREDICTED: prostaglandin D2 synthase, hematopoietic-like [Bos
taurus].
Length = 199
Score = 67.0 bits (162), Expect = 2e-11
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 3/202 (1%)
Frame = +1
Query: 88 LHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEIDGMKLV 267
L YFN RGR E IR++ A +++E+ I E D +L F ++P++E+DG+ L
Sbjct: 6 LIYFNMRGRAEIIRYIFAYLDIKYEDHRI---EQADWPEIKSTLPFGKIPILEVDGLNLH 62
Query: 268 QTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEK--DAKVASI 441
Q+ AI Y+ +L GK E+ +D + + D + P EK D K
Sbjct: 63 QSLAIARYLTRNTDLAGKTELEQCQVDAIVDTLDD------FMSRFPWTEKRQDIKNQIF 116
Query: 442 KEKSTNRYLPAFEKVLKSHGQ-DYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPLLKA 618
KE T P + + G+ ++L+G+ ++ AD LL P L
Sbjct: 117 KELLTCDAPPLLQNLDTYLGENEWLIGDSVTWADFYWEICSTTLLVFKSDLLDIHPRLVT 176
Query: 619 LKTRVSNLPTVKKFLQPGSQRK 684
L+ +V ++P + ++ Q K
Sbjct: 177 LRKKVQSIPAIADWILRRPQTK 198
>ref|NP_001040025.1| glutathione S-transferase mu 3 [Bos taurus].
Length = 225
Score = 62.8 bits (151), Expect = 5e-10
Identities = 59/218 (27%), Positives = 85/218 (38%), Gaps = 12/218 (5%)
Frame = +1
Query: 85 ILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPE--DLDK-----LTNDGSLLFQQVPMV 243
+L Y++ RG IR LL +EEK E D DK + L F +P +
Sbjct: 8 VLGYWDIRGLAHAIRMLLEFTDTSYEEKRYTCGEAPDYDKSQWLDVKFKLDLDFPNLPYL 67
Query: 244 EIDGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKD 423
+L Q+ AIL YIA K+N+ G +ER +D+ + D ++ L P +
Sbjct: 68 MDGKNRLTQSNAILRYIARKHNMCGDTEEERIRVDIMENQIMDFRMQLVQLCYNPDH--- 124
Query: 424 AKVASIKEKSTNRYLPAFEKVLKSHG-----QDYLVGNKLSRADIQXXXXXXXXXXXDPS 588
EK RYL LK + G KL+ D +P
Sbjct: 125 -------EKLKPRYLEQLPGQLKQFSLFLGKYSWFAGEKLTFVDFLTYDVLDQNRMFEPK 177
Query: 589 LLANFPLLKALKTRVSNLPTVKKFLQPGSQRKPPMDEK 702
L FP LKA R L + ++Q K P++ K
Sbjct: 178 CLDEFPNLKAFMCRFEALEKIATYMQSDRFLKMPVNNK 215
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 38,006,676
Number of extensions: 1006920
Number of successful extensions: 3599
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 3576
Number of HSP's successfully gapped: 13
Length of query: 335
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 232
Effective length of database: 14,273,310
Effective search space: 3311407920
Effective search space used: 3311407920
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008692
(1006 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_532173.1| PREDICTED: similar to Glutathione S-transferase... 368 e-102
Alignment gi|XP_538962.1| PREDICTED: similar to Glutathione S-transferase... 276 3e-74
Alignment gi|XP_852870.1| PREDICTED: similar to Glutathione S-transferase... 260 2e-69
Alignment gi|XP_866312.1| PREDICTED: similar to glutathione S-transferase... 247 1e-65
Alignment gi|XP_532174.1| PREDICTED: similar to glutathione S-transferase... 247 1e-65
Alignment gi|XP_535577.1| PREDICTED: similar to glutathione S-transferase... 245 5e-65
Alignment gi|XP_848302.1| PREDICTED: similar to glutathione S-transferase... 154 1e-37
Alignment gi|XP_852859.1| PREDICTED: similar to Glutathione S-transferase... 119 3e-27
Alignment gi|XP_856069.1| PREDICTED: similar to glutathione S-transferase... 116 4e-26
Alignment gi|XP_855742.1| PREDICTED: similar to glutathione S-transferase... 114 2e-25
>ref|XP_532173.1| PREDICTED: similar to Glutathione S-transferase A3-3 (GST
class-alpha) [Canis familiaris].
Length = 223
Score = 368 bits (945), Expect = e-102
Identities = 182/222 (81%), Positives = 196/222 (88%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MAGKP LHYFNGRGRME IRWLLA+AGVEFEEKFI TPEDLDKL NDGSL+FQQVPMVEI
Sbjct: 1 MAGKPKLHYFNGRGRMESIRWLLASAGVEFEEKFINTPEDLDKLKNDGSLMFQQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKLVQTRAILNYIATKYNLYGKD KERALIDMYTEG+ DL EMI++LPLCPP++KDAK
Sbjct: 61 DGMKLVQTRAILNYIATKYNLYGKDIKERALIDMYTEGIVDLNEMIMVLPLCPPDQKDAK 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
+ I+E++T+RYLP FEKVLKSHGQDYLVGNKLSRADI D SLLANFPL
Sbjct: 121 ITLIRERTTDRYLPVFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLLANFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFRI 735
LKALKTRVSNLPTVKKFLQPGS RKPP+DEK LE+AK IFRI
Sbjct: 181 LKALKTRVSNLPTVKKFLQPGSPRKPPLDEKSLEQAKKIFRI 222
>ref|XP_538962.1| PREDICTED: similar to Glutathione S-transferase 5.7 (GST 5.7) (GST
class-alpha) (GST A4-4) (GSTA4-4) [Canis familiaris].
Length = 238
Score = 276 bits (705), Expect = 3e-74
Identities = 130/223 (58%), Positives = 167/223 (74%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MAGKP LHYFNGRGRME IRWLLAAAGVEFEE+ +T E+ +KL G+L+++QVPMVEI
Sbjct: 1 MAGKPKLHYFNGRGRMESIRWLLAAAGVEFEEELFETREEFEKLIQGGTLMYEQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGM LV+TRAIL Y+A KYNLYG++ +E+A IDMY EG+ DL +MI+ PL P EK+
Sbjct: 61 DGMNLVETRAILRYLAAKYNLYGRNIQEQAWIDMYVEGLKDLSDMIMFFPLSLPGEKEMN 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
+ I E++T ++ P +EK L+ HGQD+LVGN+LS ADIQ PS+L FPL
Sbjct: 121 LEYILERATTKFFPVYEKALRDHGQDFLVGNRLSWADIQLLEVILMAEECKPSVLTGFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFRIK 738
L+ K R+S +PT++KFLQPGSQRKPP+DE +E KNIF+ +
Sbjct: 181 LQEFKARISYIPTIQKFLQPGSQRKPPLDESSIESVKNIFKFE 223
>ref|XP_852870.1| PREDICTED: similar to Glutathione S-transferase 5.7 (GST 5.7) (GST
class-alpha) (GST A4-4) (GSTA4-4) [Canis familiaris].
Length = 244
Score = 260 bits (664), Expect = 2e-69
Identities = 130/228 (57%), Positives = 163/228 (71%)
Frame = +1
Query: 43 VERDQQTAIMAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLL 222
+ + + +MA KP L+YF GRGRME IRWLLAAAGVEFEE+FI+T E +KL DG LL
Sbjct: 14 LSENPEPRVMATKPKLYYFRGRGRMESIRWLLAAAGVEFEEEFIETAEQYEKLQKDGRLL 73
Query: 223 FQQVPMVEIDGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPL 402
F QVPM+EIDGM L QTRAIL+Y+A KY+LYGKD KE I+MY +G DL MI L
Sbjct: 74 FGQVPMIEIDGMVLTQTRAILSYLAAKYDLYGKDLKETVRINMYADGTLDLMLMIALAAF 133
Query: 403 CPPNEKDAKVASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXD 582
PP EK+ +A + +K+ RY P FEK+LK HGQD+LVGNK S ADIQ +
Sbjct: 134 KPPAEKEESLAVVVQKAQTRYFPVFEKILKDHGQDFLVGNKFSWADIQLLEAILMVEELN 193
Query: 583 PSLLANFPLLKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNI 726
S+L++F LL+A KTR+SN+PT+KKFLQPGSQR+PP D +E ++I
Sbjct: 194 ASVLSDFRLLQAFKTRISNIPTIKKFLQPGSQRQPPPDSHYVEVVRSI 241
>ref|XP_866312.1| PREDICTED: similar to glutathione S-transferase A4 isoform 2 [Canis
familiaris].
Length = 222
Score = 247 bits (631), Expect = 1e-65
Identities = 121/220 (55%), Positives = 161/220 (73%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MA KP LHY NGRGRME +RW+LAAAGVEF+E+F++T E L KL + LLFQQVPMVEI
Sbjct: 1 MAAKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKLVQTR+IL+YIA K++L+G+D KER LIDMY EG DL E+I++ P P+++ +
Sbjct: 61 DGMKLVQTRSILHYIADKHHLFGRDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
V ++ +K+ RY P FEKVL+ HGQ +LVGN+LS ADI P++L+ FP
Sbjct: 121 VVNMAQKAIIRYFPVFEKVLRDHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIF 729
L+ ++SN+PT+KKFL+PGS++KPP D+ + NIF
Sbjct: 181 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 220
>ref|XP_532174.1| PREDICTED: similar to glutathione S-transferase A4 isoform 1 [Canis
familiaris].
Length = 222
Score = 247 bits (631), Expect = 1e-65
Identities = 121/220 (55%), Positives = 161/220 (73%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MA KP LHY NGRGRME +RW+LAAAGVEF+E+F++T E L KL + LLFQQVPMVEI
Sbjct: 1 MAAKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKLVQTR+IL+YIA K++L+G+D KER LIDMY EG DL E+I++ P P+++ +
Sbjct: 61 DGMKLVQTRSILHYIADKHHLFGRDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQKE 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
V ++ +K+ RY P FEKVL+ HGQ +LVGN+LS ADI P++L+ FP
Sbjct: 121 VVNMAQKAIIRYFPVFEKVLRDHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIF 729
L+ ++SN+PT+KKFL+PGS++KPP D+ + NIF
Sbjct: 181 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 220
>ref|XP_535577.1| PREDICTED: similar to glutathione S-transferase A4 isoform 1 [Canis
familiaris].
Length = 222
Score = 245 bits (625), Expect = 5e-65
Identities = 121/220 (55%), Positives = 161/220 (73%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MA KP LHY NGRGRME IRW+LAAAGVEF+E+F++T E L KL + LLFQQVPMVE
Sbjct: 1 MAVKPKLHYPNGRGRMESIRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVET 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKLVQTR+IL+YIA K++L+G+D KER LIDMY EG+ DL E+I++ P P+++ +
Sbjct: 61 DGMKLVQTRSILHYIADKHHLFGRDLKERTLIDMYVEGMLDLLELIIMHPFLKPDDQQKE 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
V ++ +K+ RY P FEKVL+ HGQ +LVGN+LS ADI P++L+ FP
Sbjct: 121 VVNMAQKAIIRYFPVFEKVLRDHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFPH 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIF 729
L+ ++SN+PT+KKFL+PGS++KPP D+ + NIF
Sbjct: 181 LQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 220
>ref|XP_848302.1| PREDICTED: similar to glutathione S-transferase A4 isoform 1 [Canis
familiaris].
Length = 128
Score = 154 bits (389), Expect = 1e-37
Identities = 75/120 (62%), Positives = 93/120 (77%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MA KP LHY NGRGRME +RW+LAAAGVEF+E+F++T E L KL + LLFQQVPMVE
Sbjct: 1 MAAKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVET 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGM LVQTR+IL+YIA K++L+G+D KER LIDMY EG DL E+I + P P+++ K
Sbjct: 61 DGMNLVQTRSILHYIADKHHLFGRDLKERTLIDMYVEGTLDLLELISMHPFLKPDDQQRK 120
>ref|XP_852859.1| PREDICTED: similar to Glutathione S-transferase A3-3 (GST
class-alpha) [Canis familiaris].
Length = 137
Score = 119 bits (299), Expect = 3e-27
Identities = 69/139 (49%), Positives = 87/139 (62%), Gaps = 5/139 (3%)
Frame = +1
Query: 337 ALIDMYTEGVADLGEMILLLPLCPPNEKDAKVASIKEKSTNRYLPAFEKVLKSHGQDYLV 516
+LIDMYTEG+ DL +I++LPLCPP++KD ++ I+E++T+ YLP FEK
Sbjct: 15 SLIDMYTEGMVDLNGLIMILPLCPPDQKD-QITLIRERTTDHYLPVFEK----------- 62
Query: 517 GNKLSRADIQXXXXXXXXXXXDPSLLANFPLL-----KALKTRVSNLPTVKKFLQPGSQR 681
+ + D L FP+L ALKTRVSNLPTVKKFLQPGS R
Sbjct: 63 -GSFAISSWSVWRLYVFRNVTDTFL---FPVLHESNESALKTRVSNLPTVKKFLQPGSPR 118
Query: 682 KPPMDEKKLEEAKNIFRIK 738
KPP+DEK LE+AK IFRIK
Sbjct: 119 KPPLDEKSLEQAKKIFRIK 137
>ref|XP_856069.1| PREDICTED: similar to glutathione S-transferase A4 isoform 2 [Canis
familiaris].
Length = 119
Score = 116 bits (290), Expect = 4e-26
Identities = 56/80 (70%), Positives = 68/80 (85%)
Frame = +1
Query: 115 MECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEIDGMKLVQTRAILNYI 294
ME IRW+LAAAGVEF+E+F++T E L KL + LLFQQVPMVE DGMKLVQTR+IL+YI
Sbjct: 1 MESIRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVETDGMKLVQTRSILHYI 60
Query: 295 ATKYNLYGKDAKERALIDMY 354
A K++L+G+D KER LIDMY
Sbjct: 61 ADKHHLFGRDLKERTLIDMY 80
>ref|XP_855742.1| PREDICTED: similar to glutathione S-transferase A4 isoform 2 [Canis
familiaris].
Length = 119
Score = 114 bits (284), Expect = 2e-25
Identities = 54/80 (67%), Positives = 67/80 (83%)
Frame = +1
Query: 115 MECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEIDGMKLVQTRAILNYI 294
ME +RW+LAAAGVEF+E+F++T E L KL + LLFQQVPMVE DGM LVQTR+IL+YI
Sbjct: 1 MESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVETDGMNLVQTRSILHYI 60
Query: 295 ATKYNLYGKDAKERALIDMY 354
A K++L+G+D KER LIDMY
Sbjct: 61 ADKHHLFGRDLKERTLIDMY 80
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 39,621,705
Number of extensions: 1038210
Number of successful extensions: 3585
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 3560
Number of HSP's successfully gapped: 22
Length of query: 335
Length of database: 18,874,504
Length adjustment: 103
Effective length of query: 232
Effective length of database: 15,440,896
Effective search space: 3582287872
Effective search space used: 3582287872
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008692
(1006 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_999554.1| glutathione S-transferase alpha M14 [Sus scrofa]. 400 e-112
Alignment gi|NP_999015.1| glutathione S-transferase A2 [Sus scrofa]. 398 e-111
Alignment gi|XP_003128840.1| PREDICTED: glutathione S-transferase A1-like... 357 4e-99
Alignment gi|XP_003128841.1| PREDICTED: glutathione S-transferase A4-like... 266 2e-71
Alignment gi|XP_003356871.1| PREDICTED: glutathione S-transferase A4-like... 266 2e-71
Alignment gi|NP_001230308.1| glutathione S-transferase A4 [Sus scrofa]. 248 4e-66
Alignment gi|XP_003128842.2| PREDICTED: glutathione S-transferase alpha M... 228 4e-60
Alignment gi|XP_003122501.1| PREDICTED: glutathione S-transferase P 1-lik... 92 6e-19
Alignment gi|XP_003357127.1| PREDICTED: hematopoietic prostaglandin D syn... 70 1e-12
Alignment gi|XP_003125913.1| PREDICTED: glutathione S-transferase Mu 5-li... 61 9e-10
>ref|NP_999554.1| glutathione S-transferase alpha M14 [Sus scrofa].
Length = 222
Score = 400 bits (1027), Expect = e-112
Identities = 201/220 (91%), Positives = 204/220 (92%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI
Sbjct: 1 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK
Sbjct: 61 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQ DPSLLANFPL
Sbjct: 121 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQLVELLYYVEELDPSLLANFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIF 729
LKALKTRVSNLPTVKKFLQPGSQRKPPMD KK+ ++ F
Sbjct: 181 LKALKTRVSNLPTVKKFLQPGSQRKPPMDAKKIRRSQEYF 220
>ref|NP_999015.1| glutathione S-transferase A2 [Sus scrofa].
Length = 223
Score = 398 bits (1023), Expect = e-111
Identities = 200/223 (89%), Positives = 206/223 (92%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFI+ P DL+KLTNDGSLLFQQVPMVEI
Sbjct: 1 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIENPNDLNKLTNDGSLLFQQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK
Sbjct: 61 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQ DPSLLANFPL
Sbjct: 121 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQLVELLYYVEELDPSLLANFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFRIK 738
LKALKTRVSNLPTVKKFLQPGSQRKPP DE+ LE+A+ IF+ K
Sbjct: 181 LKALKTRVSNLPTVKKFLQPGSQRKPPTDEESLEKARRIFKFK 223
>ref|XP_003128840.1| PREDICTED: glutathione S-transferase A1-like [Sus scrofa].
Length = 223
Score = 357 bits (917), Expect = 4e-99
Identities = 176/223 (78%), Positives = 196/223 (87%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MAGKP LHYF+GRGR E IRWLLA+AGVEFEEKF+ T EDL+KL NDGSL+FQQVPM+EI
Sbjct: 1 MAGKPKLHYFDGRGRAEVIRWLLASAGVEFEEKFVDTLEDLEKLRNDGSLMFQQVPMIEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKLVQTRAILNYIATKY+L GKD KERA +DMYTEG+AD+GEMI+LLP+CPP+EKDAK
Sbjct: 61 DGMKLVQTRAILNYIATKYDLCGKDIKERAAVDMYTEGIADIGEMIMLLPICPPDEKDAK 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
+A IKE+ +N YLPAFEKVLKSHGQDYLVGNKLSRADIQ DPSLLANFPL
Sbjct: 121 MALIKERVSNHYLPAFEKVLKSHGQDYLVGNKLSRADIQLVELLYYVEELDPSLLANFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFRIK 738
LKALKTRVSNLPTVKKFLQPGSQRKPP DE+ LE+A+ IF+ K
Sbjct: 181 LKALKTRVSNLPTVKKFLQPGSQRKPPTDEESLEKARRIFKFK 223
>ref|XP_003128841.1| PREDICTED: glutathione S-transferase A4-like [Sus scrofa].
Length = 222
Score = 266 bits (679), Expect = 2e-71
Identities = 131/221 (59%), Positives = 160/221 (72%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MA KP L+YF GRGRME IRWLLAAAGVEFEE+F +T E +KL DG LLF QVP+VEI
Sbjct: 1 MAAKPKLYYFRGRGRMESIRWLLAAAGVEFEEEFFETREQYEKLKKDGLLLFGQVPLVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGM L QTRAIL+Y+A KYNL+GKD KER IDMY +G DL M+ L PP EK+
Sbjct: 61 DGMALTQTRAILSYLAAKYNLHGKDLKERVRIDMYADGTLDLMMMVALAAFKPPGEKEEN 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
+A + EK+ RY P FEK+LK G+D+LVGNK S ADIQ D S+L++FPL
Sbjct: 121 LALVVEKAKTRYFPVFEKILKDQGEDFLVGNKFSWADIQLLEAILMMEELDASVLSDFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFR 732
L+A KTR+SN+PT+KKFLQPGSQRKPP D ++ +N+ +
Sbjct: 181 LQAFKTRISNIPTIKKFLQPGSQRKPPPDSHYVKVVRNVLQ 221
>ref|XP_003356871.1| PREDICTED: glutathione S-transferase A4-like [Sus scrofa].
Length = 222
Score = 266 bits (679), Expect = 2e-71
Identities = 131/221 (59%), Positives = 160/221 (72%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MA KP L+YF GRGRME IRWLLAAAGVEFEE+F +T E +KL DG LLF QVP+VEI
Sbjct: 1 MAAKPKLYYFRGRGRMESIRWLLAAAGVEFEEEFFETREQYEKLKKDGLLLFGQVPLVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGM L QTRAIL+Y+A KYNL+GKD KER IDMY +G DL M+ L PP EK+
Sbjct: 61 DGMALTQTRAILSYLAAKYNLHGKDLKERVRIDMYADGTLDLMMMVALAAFKPPGEKEEN 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
+A + EK+ RY P FEK+LK G+D+LVGNK S ADIQ D S+L++FPL
Sbjct: 121 LALVVEKAKTRYFPVFEKILKDQGEDFLVGNKFSWADIQLLEAILMMEELDASVLSDFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFR 732
L+A KTR+SN+PT+KKFLQPGSQRKPP D ++ +N+ +
Sbjct: 181 LQAFKTRISNIPTIKKFLQPGSQRKPPPDSHYVKVVRNVLQ 221
>ref|NP_001230308.1| glutathione S-transferase A4 [Sus scrofa].
Length = 223
Score = 248 bits (633), Expect = 4e-66
Identities = 122/221 (55%), Positives = 162/221 (73%)
Frame = +1
Query: 67 IMAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVE 246
+MA KP LHY NGRGRME +RW+LAAAGVEF+E+F++T E L KL + LLFQQVPMVE
Sbjct: 1 MMATKPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLQKLQDGNHLLFQQVPMVE 60
Query: 247 IDGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDA 426
IDGMKLVQTR+IL+YIA K++L+GKD KER LIDMY EG DL E+I++ P P+++
Sbjct: 61 IDGMKLVQTRSILHYIADKHHLFGKDLKERTLIDMYVEGTLDLLELIIMHPFLKPDDQQK 120
Query: 427 KVASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFP 606
+V ++ +K+ RY P FEKVL+ HGQ +LVGN+LS ADI P++L+ FP
Sbjct: 121 EVVNMAQKAIIRYFPVFEKVLRGHGQRFLVGNQLSLADIILLQTILALEEKIPNILSAFP 180
Query: 607 LLKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIF 729
L+ ++SN+PT+KKFL+PGS++KPP D+ + NIF
Sbjct: 181 HLQEFTVKISNIPTIKKFLEPGSKKKPPPDDIYVRTVYNIF 221
>ref|XP_003128842.2| PREDICTED: glutathione S-transferase alpha M14-like [Sus scrofa].
Length = 225
Score = 228 bits (581), Expect = 4e-60
Identities = 119/144 (82%), Positives = 124/144 (86%), Gaps = 2/144 (1%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLD--KLTNDGSLLFQQVPMV 243
MA +P L+YFNGRGRME W LAAAGVEF + F + L L+ DGSLLFQQVPMV
Sbjct: 1 MASQPRLYYFNGRGRMEAFPWRLAAAGVEFNKHFDASSISLHFFLLSQDGSLLFQQVPMV 60
Query: 244 EIDGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKD 423
EIDGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKD
Sbjct: 61 EIDGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKD 120
Query: 424 AKVASIKEKSTNRYLPAFEKVLKS 495
AKVASIKEKSTNRYLPAFEK L S
Sbjct: 121 AKVASIKEKSTNRYLPAFEKALPS 144
>ref|XP_003122501.1| PREDICTED: glutathione S-transferase P 1-like [Sus scrofa].
Length = 239
Score = 91.7 bits (226), Expect = 6e-19
Identities = 69/208 (33%), Positives = 103/208 (49%), Gaps = 3/208 (1%)
Frame = +1
Query: 94 YFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEIDGMKLVQT 273
YF RGR E +R LLA G ++E+ + T E + + L+ Q+P + + L Q+
Sbjct: 37 YFPARGRCEAMRMLLADQGQSWKEEVV-TKETWLQGPLKATCLYGQLPKFQDGDLTLYQS 95
Query: 274 RAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAKVASIKEKS 453
AIL ++ LYGKD +E AL+DM +GV DL L L N ++ K ++E
Sbjct: 96 NAILRHLGRSLGLYGKDLREAALLDMVNDGVEDLRR--LCSHLIRHNYEEDKARYVEE-- 151
Query: 454 TNRYLPAFEKVLKSH--GQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPLLKALKT 627
+L FE +L + GQ ++VG+++S AD PS L FPLL A
Sbjct: 152 LPGHLRPFETLLSQNQGGQAFIVGSQISFADYNLLDLLLSHQVLVPSCLDAFPLLSAYVA 211
Query: 628 RVSNLPTVKKFL-QPGSQRKPPMDEKKL 708
R+S P +K FL P +P +K+
Sbjct: 212 RLSARPKLKAFLASPEHVNRPIFGSRKI 239
>ref|XP_003357127.1| PREDICTED: hematopoietic prostaglandin D synthase-like [Sus
scrofa].
Length = 199
Score = 70.5 bits (171), Expect = 1e-12
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 6/205 (2%)
Frame = +1
Query: 88 LHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEIDGMKLV 267
L YFN RGR E IR++ A +++E+ I E D +L F ++P++E+DG+ L
Sbjct: 6 LTYFNMRGRAEIIRYIFAYLDIKYEDHRI---EQADWPQIKPTLPFGKIPILEVDGLNLH 62
Query: 268 QTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAKVASIKE 447
Q+ AI Y+A +L GK E+ +D + + D C P + K +K+
Sbjct: 63 QSLAIARYLAKNTDLAGKTDLEQCQVDAIVDTLDDFMS-------CFPWAE--KKQDVKD 113
Query: 448 KSTNRYL----PAFEKVLKSH--GQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
+ N L P + L ++ +++ +GN ++ AD P LL P
Sbjct: 114 QIFNELLTCEAPHLLQDLDTYLGEKEWFIGNSVTWADFYWEICSTTLLVFKPDLLDIHPR 173
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRK 684
L L+ +V ++P + ++Q Q K
Sbjct: 174 LVTLRKKVQSIPAIANWIQQRPQTK 198
>ref|XP_003125913.1| PREDICTED: glutathione S-transferase Mu 5-like [Sus scrofa].
Length = 225
Score = 61.2 bits (147), Expect = 9e-10
Identities = 57/218 (26%), Positives = 86/218 (39%), Gaps = 12/218 (5%)
Frame = +1
Query: 85 ILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPE--DLDK-----LTNDGSLLFQQVPMV 243
+L Y++ RG IR LL +EEK E D D+ + L F +P +
Sbjct: 8 VLGYWDIRGLAHAIRMLLEFTDTSYEEKRYICGEAPDYDRSQWLDVKYKLDLDFPNLPYL 67
Query: 244 EIDGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKD 423
KL Q+ AIL YIA K+N+ G+ +E+ +D+ + D ++ L P +
Sbjct: 68 MDGKNKLTQSNAILRYIARKHNMCGETEEEKIRVDIMENQIMDFRMQLIRLCYSPDH--- 124
Query: 424 AKVASIKEKSTNRYLPAFEKVLKSHG-----QDYLVGNKLSRADIQXXXXXXXXXXXDPS 588
EK +YL LK + G KL+ D +P
Sbjct: 125 -------EKLKPQYLEQLPGQLKQFSLFLGKYSWFAGEKLTFVDFLTYDVLDQNRIFEPR 177
Query: 589 LLANFPLLKALKTRVSNLPTVKKFLQPGSQRKPPMDEK 702
L FP LKA R L + ++Q K P++ K
Sbjct: 178 CLDEFPNLKAFMCRFEALEKIAAYMQSDRFLKMPINNK 215
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 24,464,612
Number of extensions: 647871
Number of successful extensions: 2357
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 2340
Number of HSP's successfully gapped: 12
Length of query: 335
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 236
Effective length of database: 8,879,129
Effective search space: 2095474444
Effective search space used: 2095474444
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008692
(1006 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_032208.2| glutathione S-transferase A2 [Mus musculus]. 330 8e-91
Alignment gi|NP_032207.3| glutathione S-transferase A1 [Mus musculus]. 330 1e-90
Alignment gi|NP_001230021.1| predicted gene 3776 [Mus musculus]. 328 4e-90
Alignment gi|NP_001116132.1| hypothetical protein LOC100042314 [Mus muscu... 326 2e-89
Alignment gi|NP_001070821.1| glutathione S-transferase A3 [Mus musculus]. 325 4e-89
Alignment gi|NP_034486.2| glutathione S-transferase A3 [Mus musculus]. 325 4e-89
Alignment gi|NP_034487.2| glutathione S-transferase A4 [Mus musculus]. 258 4e-69
Alignment gi|NP_038569.1| glutathione S-transferase P 1 [Mus musculus]. 89 4e-18
Alignment gi|NP_659118.1| hypothetical protein LOC225884 [Mus musculus]. 88 9e-18
Alignment gi|XP_001478705.1| PREDICTED: glutathione S-transferase P 2-lik... 86 5e-17
>ref|NP_032208.2| glutathione S-transferase A2 [Mus musculus].
Length = 222
Score = 330 bits (847), Expect = 8e-91
Identities = 159/221 (71%), Positives = 186/221 (84%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MAGKP+LHYFN RGRMECIRWLLAAAGVEFEEKFI++PEDL+KL DG+L+F QVPMVEI
Sbjct: 1 MAGKPVLHYFNARGRMECIRWLLAAAGVEFEEKFIQSPEDLEKLKKDGNLMFDQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKLVQTRAILNYIATKY+LYGKD KERALIDMYTEG+ DL EMI L LCPP++++AK
Sbjct: 61 DGMKLVQTRAILNYIATKYDLYGKDMKERALIDMYTEGILDLTEMIGQLVLCPPDQREAK 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
A K+++ NRYLPAFEKVLKSHGQDYLVGN+L+R D+ D SLL FPL
Sbjct: 121 TALAKDRTKNRYLPAFEKVLKSHGQDYLVGNRLTRVDVHLLELLLYVEELDASLLTPFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFR 732
LKA K+R+S+LP VKKFL PGSQRKPP+D K++EEA+ +F+
Sbjct: 181 LKAFKSRISSLPNVKKFLHPGSQRKPPLDAKQIEEARKVFK 221
>ref|NP_032207.3| glutathione S-transferase A1 [Mus musculus].
Length = 223
Score = 330 bits (846), Expect = 1e-90
Identities = 160/223 (71%), Positives = 187/223 (83%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MAGKP+LHYFN RGRMECIRWLLAAAGVEFEEKFI++PEDL+KL DG+L+F QVPMVEI
Sbjct: 1 MAGKPVLHYFNARGRMECIRWLLAAAGVEFEEKFIQSPEDLEKLKKDGNLMFDQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKL QTRAILNYIATKY+LYGKD KERALIDMY+EG+ DL EMI L LCPP++++AK
Sbjct: 61 DGMKLAQTRAILNYIATKYDLYGKDMKERALIDMYSEGILDLTEMIGQLVLCPPDQREAK 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
A K+++ NRYLPAFEKVLKSHGQDYLVGN+L+R DI D SLL FPL
Sbjct: 121 TALAKDRTKNRYLPAFEKVLKSHGQDYLVGNRLTRVDIHLLEVLLYVEEFDASLLTPFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFRIK 738
LKA K+R+S+LP VKKFLQPGSQRKPPMD K+++EA+ F+I+
Sbjct: 181 LKAFKSRISSLPNVKKFLQPGSQRKPPMDAKQIQEARKAFKIQ 223
>ref|NP_001230021.1| predicted gene 3776 [Mus musculus].
Length = 223
Score = 328 bits (841), Expect = 4e-90
Identities = 159/223 (71%), Positives = 187/223 (83%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MAGKP+LH+FN RGRMECIRWLLAAAGVEFEEKFI++PEDL+KL DG+L+F QVPMVEI
Sbjct: 1 MAGKPVLHHFNARGRMECIRWLLAAAGVEFEEKFIQSPEDLEKLKKDGNLMFDQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKL QTRAILNYIATKY+LYGKD KERALIDMY+EG+ DL EMI L LCPP++++AK
Sbjct: 61 DGMKLAQTRAILNYIATKYDLYGKDMKERALIDMYSEGILDLTEMIGQLVLCPPDQREAK 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
A K+++ NRYLPAFEKVLKSHGQDYLVGN+L+R DI D SLL FPL
Sbjct: 121 TALAKDRTKNRYLPAFEKVLKSHGQDYLVGNRLTRVDIHLLEVLLYVEEFDASLLTPFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFRIK 738
LKA K+R+S+LP VKKFLQPGSQRKPPMD K+++EA+ F+I+
Sbjct: 181 LKAFKSRISSLPNVKKFLQPGSQRKPPMDAKQIQEARKAFKIQ 223
>ref|NP_001116132.1| hypothetical protein LOC100042314 [Mus musculus].
Length = 222
Score = 326 bits (835), Expect = 2e-89
Identities = 157/221 (71%), Positives = 185/221 (83%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MAGKP+LH+FN RGRMECIRWLLAAAGVEFEEKFI++PEDL+KL DG+L+F QVPMVEI
Sbjct: 1 MAGKPVLHHFNARGRMECIRWLLAAAGVEFEEKFIQSPEDLEKLKKDGNLMFDQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKLVQTRAILNYIATKY+LYGKD KERALIDMY+EG+ DL EMI L +CPP++K+AK
Sbjct: 61 DGMKLVQTRAILNYIATKYDLYGKDMKERALIDMYSEGILDLTEMIGQLLICPPDQKEAK 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
A K+++ NRYLPAFEKVLK HGQDYLVGN+L+R D+ D SLL FPL
Sbjct: 121 TALAKDRTKNRYLPAFEKVLKGHGQDYLVGNRLTRVDVHLLELLLYVEEFDASLLTPFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFR 732
LKA K+R+S+LP VKKFL PGSQRKPP+D K++EEA+ IF+
Sbjct: 181 LKAFKSRISSLPNVKKFLHPGSQRKPPLDAKQIEEARKIFK 221
>ref|NP_001070821.1| glutathione S-transferase A3 [Mus musculus].
Length = 221
Score = 325 bits (832), Expect = 4e-89
Identities = 164/220 (74%), Positives = 184/220 (83%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MAGKP+LHYF+GRGRME IRWLLAAAGVEFEEKF+KT +DL +L +DGSL+FQQVPMVEI
Sbjct: 1 MAGKPVLHYFDGRGRMEPIRWLLAAAGVEFEEKFLKTRDDLARLRSDGSLMFQQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKLVQT+AILNYIA+KYNLYGKD KERA+IDMYTEGVADL MIL P PP EK+A
Sbjct: 61 DGMKLVQTKAILNYIASKYNLYGKDMKERAIIDMYTEGVADLEIMILYYPHMPPEEKEAS 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
+A IKE++ NRY PAFEKVLKSHGQDYLVGN+LSRADI DP ++ NFPL
Sbjct: 121 LAKIKEQTRNRYFPAFEKVLKSHGQDYLVGNRLSRADIALVELLYHVEELDPGVVDNFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIF 729
LKAL++RVSNLPTVKKFLQPGSQRKP D K +E AK IF
Sbjct: 181 LKALRSRVSNLPTVKKFLQPGSQRKPFDDAKCVESAKKIF 220
>ref|NP_034486.2| glutathione S-transferase A3 [Mus musculus].
Length = 221
Score = 325 bits (832), Expect = 4e-89
Identities = 164/220 (74%), Positives = 184/220 (83%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MAGKP+LHYF+GRGRME IRWLLAAAGVEFEEKF+KT +DL +L +DGSL+FQQVPMVEI
Sbjct: 1 MAGKPVLHYFDGRGRMEPIRWLLAAAGVEFEEKFLKTRDDLARLRSDGSLMFQQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKLVQT+AILNYIA+KYNLYGKD KERA+IDMYTEGVADL MIL P PP EK+A
Sbjct: 61 DGMKLVQTKAILNYIASKYNLYGKDMKERAIIDMYTEGVADLEIMILYYPHMPPEEKEAS 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
+A IKE++ NRY PAFEKVLKSHGQDYLVGN+LSRADI DP ++ NFPL
Sbjct: 121 LAKIKEQTRNRYFPAFEKVLKSHGQDYLVGNRLSRADIALVELLYHVEELDPGVVDNFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIF 729
LKAL++RVSNLPTVKKFLQPGSQRKP D K +E AK IF
Sbjct: 181 LKALRSRVSNLPTVKKFLQPGSQRKPFDDAKCVESAKKIF 220
>ref|NP_034487.2| glutathione S-transferase A4 [Mus musculus].
Length = 222
Score = 258 bits (660), Expect = 4e-69
Identities = 128/221 (57%), Positives = 157/221 (71%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MA KP L+YFNGRGRME IRWLLAAAGVEFEE+F++T E +K+ DG LLF QVP+VEI
Sbjct: 1 MAAKPKLYYFNGRGRMESIRWLLAAAGVEFEEEFLETREQYEKMQKDGHLLFGQVPLVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGM L QTRAIL+Y+A KYNLYGKD KER IDMY +G DL MI + P P EK+
Sbjct: 61 DGMMLTQTRAILSYLAAKYNLYGKDLKERVRIDMYADGTQDLMMMIAVAPFKTPKEKEES 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
I ++ RY P FEK+LK HG+ +LVGN+LS ADIQ +L++FPL
Sbjct: 121 YDLILSRAKTRYFPVFEKILKDHGEAFLVGNQLSWADIQLLEAILMVEELSAPVLSDFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFR 732
L+A KTR+SN+PT+KKFLQPGSQRKPP D +E + + +
Sbjct: 181 LQAFKTRISNIPTIKKFLQPGSQRKPPPDGPYVEVVRTVLK 221
>ref|NP_038569.1| glutathione S-transferase P 1 [Mus musculus].
Length = 210
Score = 89.4 bits (220), Expect = 4e-18
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 3/204 (1%)
Frame = +1
Query: 94 YFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEIDGMKLVQT 273
YF RGR E +R LLA G ++E+ + + L + L+ Q+P E + L Q+
Sbjct: 8 YFPVRGRCEAMRMLLADQGQSWKEEVVTIDTWMQGLLKP-TCLYGQLPKFEDGDLTLYQS 66
Query: 274 RAILNYIATKYNLYGKDAKERALIDMYTEGVADL-GEMILLLPLCPPNEKDAKVASIKEK 450
AIL ++ LYGK+ +E A +DM +GV DL G+ + L+ N K+ V K
Sbjct: 67 NAILRHLGRSLGLYGKNQREAAQMDMVNDGVEDLRGKYVTLIYTNYENGKNDYV-----K 121
Query: 451 STNRYLPAFEKVLKSH--GQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPLLKALK 624
+ +L FE +L + G+ ++VG+++S AD P L NFPLL A
Sbjct: 122 ALPGHLKPFETLLSQNQGGKAFIVGDQISFADYNLLDLLLIHQVLAPGCLDNFPLLSAYV 181
Query: 625 TRVSNLPTVKKFLQPGSQRKPPMD 696
R+S P +K FL P++
Sbjct: 182 ARLSARPKIKAFLSSPEHVNRPIN 205
>ref|NP_659118.1| hypothetical protein LOC225884 [Mus musculus].
Length = 210
Score = 88.2 bits (217), Expect = 9e-18
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 3/203 (1%)
Frame = +1
Query: 94 YFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEIDGMKLVQT 273
YF RGR E +R LLA G ++E+ + T + ++ T S LF Q+P + + L Q+
Sbjct: 8 YFPSRGRCEVMRMLLADQGQSWKEEVV-TLDVWEQGTFKASCLFGQIPKFQDGELTLYQS 66
Query: 274 RAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNE-KDAKVASIKEK 450
IL ++ + LYGKD +E AL+DM +G+ DL I E KD +K
Sbjct: 67 NTILRHLGRSFGLYGKDQQEAALVDMVNDGLEDLFRRIARQYRHILKEGKDQ-----YQK 121
Query: 451 STNRYLPAFEKVLKSH--GQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPLLKALK 624
+L FE +L + GQ ++VG+++S AD + P L +FPL A
Sbjct: 122 ELPGHLKPFETLLAQNRGGQSFIVGDQISFADYRLLDVLLNLELLFPGYLNDFPLFSAYV 181
Query: 625 TRVSNLPTVKKFLQPGSQRKPPM 693
R+ + P +K FL+ P+
Sbjct: 182 ARLKSRPKLKAFLESPEHVNRPL 204
>ref|XP_001478705.1| PREDICTED: glutathione S-transferase P 2-like [Mus musculus].
Length = 210
Score = 85.9 bits (211), Expect = 5e-17
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 3/204 (1%)
Frame = +1
Query: 94 YFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEIDGMKLVQT 273
YF RGR E +R LL G ++E+ + + L + L+ Q+P E + L Q+
Sbjct: 8 YFPSRGRCEAMRMLLTDQGQSWKEEVVTIDTWMQGLLKP-TCLYGQLPKFEDGDLTLYQS 66
Query: 274 RAILNYIATKYNLYGKDAKERALIDMYTEGVADL-GEMILLLPLCPPNEKDAKVASIKEK 450
AIL ++ LYGK+ +E A +DM +GV DL G+ ++ N K+ V K
Sbjct: 67 NAILRHLGRSLGLYGKNQREAAQVDMVNDGVEDLRGKYGTMIYRNYENGKNDYV-----K 121
Query: 451 STNRYLPAFEKVLKSH--GQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPLLKALK 624
+ +L FE +L + G+ ++VG+++S AD P L NFPLL A
Sbjct: 122 ALPGHLKPFETLLSQNQGGKAFIVGDQISFADYNLLDLLLIHQVLAPGCLDNFPLLSAYV 181
Query: 625 TRVSNLPTVKKFLQPGSQRKPPMD 696
R+S P +K FL P++
Sbjct: 182 ARLSARPKIKAFLSSPEHVNRPIN 205
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 33,222,336
Number of extensions: 864656
Number of successful extensions: 3073
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 3052
Number of HSP's successfully gapped: 21
Length of query: 335
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 233
Effective length of database: 12,553,887
Effective search space: 2925055671
Effective search space used: 2925055671
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008692
(1006 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_665683.1| glutathione S-transferase A1 [Homo sapiens]. 355 3e-98
Alignment gi|NP_000838.3| glutathione S-transferase A3 [Homo sapiens]. 351 5e-97
Alignment gi|NP_000837.3| glutathione S-transferase A2 [Homo sapiens]. 341 5e-94
Alignment gi|NP_714543.1| glutathione S-transferase A5 [Homo sapiens]. 336 2e-92
Alignment gi|NP_001503.1| glutathione S-transferase A4 [Homo sapiens]. 247 1e-65
Alignment gi|NP_000843.1| glutathione S-transferase P [Homo sapiens]. 82 8e-16
Alignment gi|NP_055300.1| hematopoietic prostaglandin D synthase [Homo sa... 75 7e-14
Alignment gi|NP_000840.2| glutathione S-transferase Mu 3 [Homo sapiens]. 63 4e-10
Alignment gi|NP_000839.1| glutathione S-transferase Mu 2 isoform 1 [Homo ... 56 5e-08
Alignment gi|NP_000841.1| glutathione S-transferase Mu 4 isoform 1 [Homo ... 53 4e-07
>ref|NP_665683.1| glutathione S-transferase A1 [Homo sapiens].
Length = 222
Score = 355 bits (912), Expect = 3e-98
Identities = 179/221 (80%), Positives = 190/221 (85%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MA KP LHYFN RGRME RWLLAAAGVEFEEKFIK+ EDLDKL NDG L+FQQVPMVEI
Sbjct: 1 MAEKPKLHYFNARGRMESTRWLLAAAGVEFEEKFIKSAEDLDKLRNDGYLMFQQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKLVQTRAILNYIA+KYNLYGKD KERALIDMY EG+ADLGEMILLLP+CPP EKDAK
Sbjct: 61 DGMKLVQTRAILNYIASKYNLYGKDIKERALIDMYIEGIADLGEMILLLPVCPPEEKDAK 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
+A IKEK NRY PAFEKVLKSHGQDYLVGNKLSRADI D SL+++FPL
Sbjct: 121 LALIKEKIKNRYFPAFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLISSFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFR 732
LKALKTR+SNLPTVKKFLQPGS RKPPMDEK LEEA+ IFR
Sbjct: 181 LKALKTRISNLPTVKKFLQPGSPRKPPMDEKSLEEARKIFR 221
>ref|NP_000838.3| glutathione S-transferase A3 [Homo sapiens].
Length = 222
Score = 351 bits (901), Expect = 5e-97
Identities = 178/221 (80%), Positives = 190/221 (85%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MAGKP LHYFNGRGRME IRWLLAAAGVEFEEKFI + EDL KL NDGSL+FQQVPMVEI
Sbjct: 1 MAGKPKLHYFNGRGRMEPIRWLLAAAGVEFEEKFIGSAEDLGKLRNDGSLMFQQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKLVQTRAILNYIA+KYNLYGKD KERALIDMYTEG+ADL EMILLLPLC P EKDAK
Sbjct: 61 DGMKLVQTRAILNYIASKYNLYGKDIKERALIDMYTEGMADLNEMILLLPLCRPEEKDAK 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
+A IKEK+ +RY PAFEKVL+SHGQDYLVGNKLSRADI D SL++NFPL
Sbjct: 121 IALIKEKTKSRYFPAFEKVLQSHGQDYLVGNKLSRADISLVELLYYVEELDSSLISNFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFR 732
LKALKTR+SNLPTVKKFLQPGS RKPP D K LEEA+ IFR
Sbjct: 181 LKALKTRISNLPTVKKFLQPGSPRKPPADAKALEEARKIFR 221
>ref|NP_000837.3| glutathione S-transferase A2 [Homo sapiens].
Length = 222
Score = 341 bits (875), Expect = 5e-94
Identities = 173/221 (78%), Positives = 188/221 (85%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MA KP LHY N RGRME IRWLLAAAGVEFEEKFIK+ EDLDKL NDG L+FQQVPMVEI
Sbjct: 1 MAEKPKLHYSNIRGRMESIRWLLAAAGVEFEEKFIKSAEDLDKLRNDGYLMFQQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKLVQTRAILNYIA+KYNLYGKD KE+ALIDMY EG+ADLGEMILLLP P E+DAK
Sbjct: 61 DGMKLVQTRAILNYIASKYNLYGKDIKEKALIDMYIEGIADLGEMILLLPFSQPEEQDAK 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
+A I+EK+ NRY PAFEKVLKSHGQDYLVGNKLSRADI D SL+++FPL
Sbjct: 121 LALIQEKTKNRYFPAFEKVLKSHGQDYLVGNKLSRADIHLVELLYYVEELDSSLISSFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFR 732
LKALKTR+SNLPTVKKFLQPGS RKPPMDEK LEE++ IFR
Sbjct: 181 LKALKTRISNLPTVKKFLQPGSPRKPPMDEKSLEESRKIFR 221
>ref|NP_714543.1| glutathione S-transferase A5 [Homo sapiens].
Length = 222
Score = 336 bits (861), Expect = 2e-92
Identities = 171/221 (77%), Positives = 184/221 (83%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MA KP LHY N RG ME IRWLLAAAGVE EEKF+++ EDLDKL NDGSLLFQQVPMVEI
Sbjct: 1 MAEKPKLHYSNARGSMESIRWLLAAAGVELEEKFLESAEDLDKLRNDGSLLFQQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKLVQTRAILNYIA+KYNLYGKD KERALIDMYTEG+ DL EMILLL +C P E+DAK
Sbjct: 61 DGMKLVQTRAILNYIASKYNLYGKDMKERALIDMYTEGIVDLTEMILLLLICQPEERDAK 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
A +KEK NRY PAFEKVLKSH QDYLVGNKLS ADI D SL+++FPL
Sbjct: 121 TALVKEKIKNRYFPAFEKVLKSHRQDYLVGNKLSWADIHLVELFYYVEELDSSLISSFPL 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFR 732
LKALKTR+SNLPTVKKFLQPGSQRKPPMDEK LEEA+ IFR
Sbjct: 181 LKALKTRISNLPTVKKFLQPGSQRKPPMDEKSLEEARKIFR 221
>ref|NP_001503.1| glutathione S-transferase A4 [Homo sapiens].
Length = 222
Score = 247 bits (631), Expect = 1e-65
Identities = 119/221 (53%), Positives = 162/221 (73%)
Frame = +1
Query: 70 MAGKPILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEI 249
MA +P LHY NGRGRME +RW+LAAAGVEF+E+F++T E L KL + LLFQQVPMVEI
Sbjct: 1 MAARPKLHYPNGRGRMESVRWVLAAAGVEFDEEFLETKEQLYKLQDGNHLLFQQVPMVEI 60
Query: 250 DGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAK 429
DGMKLVQTR+IL+YIA K+NL+GK+ KER LIDMY EG DL E++++ P P+++ +
Sbjct: 61 DGMKLVQTRSILHYIADKHNLFGKNLKERTLIDMYVEGTLDLLELLIMHPFLKPDDQQKE 120
Query: 430 VASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
V ++ +K+ RY P FEK+L+ HGQ +LVGN+LS AD+ P++L+ FP
Sbjct: 121 VVNMAQKAIIRYFPVFEKILRGHGQSFLVGNQLSLADVILLQTILALEEKIPNILSAFPF 180
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRKPPMDEKKLEEAKNIFR 732
L+ ++SN+PT+K+FL+PGS++KPP DE + NIFR
Sbjct: 181 LQEYTVKLSNIPTIKRFLEPGSKKKPPPDEIYVRTVYNIFR 221
>ref|NP_000843.1| glutathione S-transferase P [Homo sapiens].
Length = 210
Score = 82.0 bits (201), Expect = 8e-16
Identities = 64/193 (33%), Positives = 94/193 (48%), Gaps = 3/193 (1%)
Frame = +1
Query: 94 YFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEIDGMKLVQT 273
YF RGR +R LLA G ++E+ + T E + + S L+ Q+P + + L Q+
Sbjct: 8 YFPVRGRCAALRMLLADQGQSWKEEVV-TVETWQEGSLKASCLYGQLPKFQDGDLTLYQS 66
Query: 274 RAILNYIATKYNLYGKDAKERALIDMYTEGVADLG-EMILLLPLCPPNEKDAKVASIKEK 450
IL ++ LYGKD +E AL+DM +GV DL + I L+ KD V K
Sbjct: 67 NTILRHLGRTLGLYGKDQQEAALVDMVNDGVEDLRCKYISLIYTNYEAGKDDYV-----K 121
Query: 451 STNRYLPAFEKVLKSH--GQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPLLKALK 624
+ L FE +L + G+ ++VG+++S AD P L FPLL A
Sbjct: 122 ALPGQLKPFETLLSQNQGGKTFIVGDQISFADYNLLDLLLIHEVLAPGCLDAFPLLSAYV 181
Query: 625 TRVSNLPTVKKFL 663
R+S P +K FL
Sbjct: 182 GRLSARPKLKAFL 194
>ref|NP_055300.1| hematopoietic prostaglandin D synthase [Homo sapiens].
Length = 199
Score = 75.5 bits (184), Expect = 7e-14
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 6/205 (2%)
Frame = +1
Query: 88 LHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPEDLDKLTNDGSLLFQQVPMVEIDGMKLV 267
L YFN RGR E IR++ A +++E+ I E D +L F ++P++E+DG+ L
Sbjct: 6 LTYFNMRGRAEIIRYIFAYLDIQYEDHRI---EQADWPEIKSTLPFGKIPILEVDGLTLH 62
Query: 268 QTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDAKVASIKE 447
Q+ AI Y+ +L G E+ +D + + D C P + K +KE
Sbjct: 63 QSLAIARYLTKNTDLAGNTEMEQCHVDAIVDTLDDFMS-------CFPWAE--KKQDVKE 113
Query: 448 KSTNRYL----PAFEKVLKSH--GQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFPL 609
+ N L P + L ++ G+++L+GN ++ AD P LL N P
Sbjct: 114 QMFNELLTYNAPHLMQDLDTYLGGREWLIGNSVTWADFYWEICSTTLLVFKPDLLDNHPR 173
Query: 610 LKALKTRVSNLPTVKKFLQPGSQRK 684
L L+ +V +P V +++ Q K
Sbjct: 174 LVTLRKKVQAIPAVANWIKRRPQTK 198
>ref|NP_000840.2| glutathione S-transferase Mu 3 [Homo sapiens].
Length = 225
Score = 63.2 bits (152), Expect = 4e-10
Identities = 61/218 (27%), Positives = 87/218 (39%), Gaps = 12/218 (5%)
Frame = +1
Query: 85 ILHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPE--DLDK-----LTNDGSLLFQQVPMV 243
+L Y++ RG IR LL +EEK E D D+ + L F +P +
Sbjct: 8 VLGYWDIRGLAHAIRLLLEFTDTSYEEKRYTCGEAPDYDRSQWLDVKFKLDLDFPNLPYL 67
Query: 244 EIDGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKD 423
K+ Q+ AIL YIA K+N+ G+ +E+ +D+ V D L+ LC
Sbjct: 68 LDGKNKITQSNAILRYIARKHNMCGETEEEKIRVDIIENQVMDFRTQ--LIRLC------ 119
Query: 424 AKVASIKEKSTNRYLPAFEKVLKSHGQ-----DYLVGNKLSRADIQXXXXXXXXXXXDPS 588
+S EK +YL LK + G KL+ D DP
Sbjct: 120 --YSSDHEKLKPQYLEELPGQLKQFSMFLGKFSWFAGEKLTFVDFLTYDILDQNRIFDPK 177
Query: 589 LLANFPLLKALKTRVSNLPTVKKFLQPGSQRKPPMDEK 702
L FP LKA R L + +LQ K P++ K
Sbjct: 178 CLDEFPNLKAFMCRFEALEKIAAYLQSDQFCKMPINNK 215
>ref|NP_000839.1| glutathione S-transferase Mu 2 isoform 1 [Homo sapiens].
Length = 218
Score = 56.2 bits (134), Expect = 5e-08
Identities = 59/206 (28%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Frame = +1
Query: 88 LHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPE----DLDKLTNDGSLL---FQQVPMVE 246
L Y+N RG IR LL +EEK + D + N+ L F +P +
Sbjct: 5 LGYWNIRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNLPYL- 63
Query: 247 IDGM-KLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKD 423
IDG K+ Q+ AIL YIA K+NL G+ KE+ D+ D + L LC +
Sbjct: 64 IDGTHKITQSNAILRYIARKHNLCGESEKEQIREDILENQFMD--SRMQLAKLCYDPD-- 119
Query: 424 AKVASIKEKSTNRYLPAFEKVLKSHG-----QDYLVGNKLSRADIQXXXXXXXXXXXDPS 588
EK YL A ++LK + Q + +G+K++ D +PS
Sbjct: 120 ------FEKLKPEYLQALPEMLKLYSQFLGKQPWFLGDKITFVDFIAYDVLERNQVFEPS 173
Query: 589 LLANFPLLKALKTRVSNLPTVKKFLQ 666
L FP LK +R L + +++
Sbjct: 174 CLDAFPNLKDFISRFEGLEKISAYMK 199
>ref|NP_000841.1| glutathione S-transferase Mu 4 isoform 1 [Homo sapiens].
Length = 218
Score = 53.1 bits (126), Expect = 4e-07
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 7/200 (3%)
Frame = +1
Query: 88 LHYFNGRGRMECIRWLLAAAGVEFEEKFIKTPE----DLDKLTNDGSLL---FQQVPMVE 246
L Y++ RG IR LL +EEK + D + N+ L F +P +
Sbjct: 5 LGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNLPYLI 64
Query: 247 IDGMKLVQTRAILNYIATKYNLYGKDAKERALIDMYTEGVADLGEMILLLPLCPPNEKDA 426
K+ Q+ AIL YIA K+NL G+ +E+ +D+ D+ + + P EK
Sbjct: 65 DGAHKITQSNAILCYIARKHNLCGETEEEKIRVDILENQAMDVSNQLARVCYSPDFEK-L 123
Query: 427 KVASIKEKSTNRYLPAFEKVLKSHGQDYLVGNKLSRADIQXXXXXXXXXXXDPSLLANFP 606
K ++E T + F + L + + VG+K++ D +P+ L FP
Sbjct: 124 KPEYLEELPT--MMQHFSQFLGK--RPWFVGDKITFVDFLAYDVLDLHRIFEPNCLDAFP 179
Query: 607 LLKALKTRVSNLPTVKKFLQ 666
LK +R L + +++
Sbjct: 180 NLKDFISRFEGLEKISAYMK 199
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 39,035,899
Number of extensions: 1028556
Number of successful extensions: 3623
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 3610
Number of HSP's successfully gapped: 13
Length of query: 335
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 232
Effective length of database: 14,901,872
Effective search space: 3457234304
Effective search space used: 3457234304
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-008692
(1006 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr07 678 0.0
>Sscrofa_Chr07
|| Length = 134764511
Score = 678 bits (342), Expect = 0.0
Identities = 358/362 (98%), Gaps = 1/362 (0%)
Strand = Plus / Minus
Query: 614 aggccctgaaaaccagagtcagcaacctccccacggtgaagaagtttctgcagcctggca 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134289989 aggccctgaaaaccagagtcagcaacctccccacggtgaagaagtttctgcagcctggca 134289930
Query: 674 gccagaggaagcctcccatggatgagaaaaaattagaagaagccaagaatattttccgga 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134289929 gccagaggaagcctcccatggatgagaaaaaattagaagaagccaagaatattttccgga 134289870
Query: 734 ttaaataaagccggctgagtgtcccaggacacccaggaccaatcttctgaaagttgctat 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134289869 ttaaataaagccggctgagtgtcccaggacacccaggaccaatcttctgaaagttgctat 134289810
Query: 794 caatcaactgcttgacctaaatgtagatcccagttatcgtcagtctaataaatgtttcca 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134289809 caatcaactgcttgacctaaatgtagatcccagttatcgtcagtctaataaatgtttcca 134289750
Query: 854 cagtgtaagtgttcatttcattagaattcagatttagatgcaaaacaatcaattttgttt 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 134289749 cagtgtaagtgttcatttcattagaattcagatttagatgcaaaacaatcaattttg-tt 134289691
Query: 914 ttgttcgcacgcaatatcctgatcttctcccggaatgtacctgaaacttaaacctaatta 973
|||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 134289690 ttgttcgcacgcaatatcatgatcttctcccggaatgtacctgagacttaaacataatta 134289631
Query: 974 aa 975
||
Sbjct: 134289630 aa 134289629
Score = 285 bits (144), Expect = 2e-74
Identities = 144/144 (100%)
Strand = Plus / Minus
Query: 342 gattgatatgtatacagaaggtgtggcagatttgggtgaaatgatcttgctgttgccact 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134264058 gattgatatgtatacagaaggtgtggcagatttgggtgaaatgatcttgctgttgccact 134263999
Query: 402 gtgcccacccaatgaaaaagatgccaaggtggcctcgatcaaagaaaaatcgacaaaccg 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134263998 gtgcccacccaatgaaaaagatgccaaggtggcctcgatcaaagaaaaatcgacaaaccg 134263939
Query: 462 ttatcttcctgcatttgaaaaagt 485
||||||||||||||||||||||||
Sbjct: 134263938 ttatcttcctgcatttgaaaaagt 134263915
Score = 285 bits (144), Expect = 2e-74
Identities = 144/144 (100%)
Strand = Plus / Minus
Query: 342 gattgatatgtatacagaaggtgtggcagatttgggtgaaatgatcttgctgttgccact 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134294804 gattgatatgtatacagaaggtgtggcagatttgggtgaaatgatcttgctgttgccact 134294745
Query: 402 gtgcccacccaatgaaaaagatgccaaggtggcctcgatcaaagaaaaatcgacaaaccg 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134294744 gtgcccacccaatgaaaaagatgccaaggtggcctcgatcaaagaaaaatcgacaaaccg 134294685
Query: 462 ttatcttcctgcatttgaaaaagt 485
||||||||||||||||||||||||
Sbjct: 134294684 ttatcttcctgcatttgaaaaagt 134294661
Score = 268 bits (135), Expect = 5e-69
Identities = 135/135 (100%)
Strand = Plus / Minus
Query: 208 gatgggagtttgctgttccagcaagtgcccatggttgagattgacgggatgaagctggtg 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134267484 gatgggagtttgctgttccagcaagtgcccatggttgagattgacgggatgaagctggtg 134267425
Query: 268 cagaccagggccatcctcaactacatcgccaccaagtacaacctctacgggaaggacgcc 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134267424 cagaccagggccatcctcaactacatcgccaccaagtacaacctctacgggaaggacgcc 134267365
Query: 328 aaggagagagccctg 342
|||||||||||||||
Sbjct: 134267364 aaggagagagccctg 134267350
Score = 268 bits (135), Expect = 5e-69
Identities = 135/135 (100%)
Strand = Plus / Minus
Query: 208 gatgggagtttgctgttccagcaagtgcccatggttgagattgacgggatgaagctggtg 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134297043 gatgggagtttgctgttccagcaagtgcccatggttgagattgacgggatgaagctggtg 134296984
Query: 268 cagaccagggccatcctcaactacatcgccaccaagtacaacctctacgggaaggacgcc 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134296983 cagaccagggccatcctcaactacatcgccaccaagtacaacctctacgggaaggacgcc 134296924
Query: 328 aaggagagagccctg 342
|||||||||||||||
Sbjct: 134296923 aaggagagagccctg 134296909
Score = 264 bits (133), Expect = 8e-68
Identities = 133/133 (100%)
Strand = Plus / Minus
Query: 484 gtgttgaagagccatggacaagactaccttgtgggcaacaagctgagcagggctgacatc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134291887 gtgttgaagagccatggacaagactaccttgtgggcaacaagctgagcagggctgacatc 134291828
Query: 544 cagctggttgaacttctctactacgtggaagagctggaccccagcctgctggccaacttc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134291827 cagctggttgaacttctctactacgtggaagagctggaccccagcctgctggccaacttc 134291768
Query: 604 cctctgctgaagg 616
|||||||||||||
Sbjct: 134291767 cctctgctgaagg 134291755
Score = 264 bits (133), Expect = 8e-68
Identities = 133/133 (100%)
Strand = Plus / Minus
Query: 484 gtgttgaagagccatggacaagactaccttgtgggcaacaagctgagcagggctgacatc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134317193 gtgttgaagagccatggacaagactaccttgtgggcaacaagctgagcagggctgacatc 134317134
Query: 544 cagctggttgaacttctctactacgtggaagagctggaccccagcctgctggccaacttc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134317133 cagctggttgaacttctctactacgtggaagagctggaccccagcctgctggccaacttc 134317074
Query: 604 cctctgctgaagg 616
|||||||||||||
Sbjct: 134317073 cctctgctgaagg 134317061
Score = 230 bits (116), Expect = 1e-57
Identities = 116/116 (100%)
Strand = Plus / Minus
Query: 41 aggttgagagagaccagcagacagccatcatggcggggaagcccattcttcactatttca 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134300940 aggttgagagagaccagcagacagccatcatggcggggaagcccattcttcactatttca 134300881
Query: 101 atggccgaggcagaatggagtgtatccggtggctcctggctgcagctggagtggag 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134300880 atggccgaggcagaatggagtgtatccggtggctcctggctgcagctggagtggag 134300825
Score = 222 bits (112), Expect = 3e-55
Identities = 115/116 (99%)
Strand = Plus / Minus
Query: 41 aggttgagagagaccagcagacagccatcatggcggggaagcccattcttcactatttca 100
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 134309131 aggttgagagagaccagcagacagtcatcatggcggggaagcccattcttcactatttca 134309072
Query: 101 atggccgaggcagaatggagtgtatccggtggctcctggctgcagctggagtggag 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134309071 atggccgaggcagaatggagtgtatccggtggctcctggctgcagctggagtggag 134309016
Score = 184 bits (93), Expect = 6e-44
Identities = 99/101 (98%)
Strand = Plus / Minus
Query: 614 aggccctgaaaaccagagtcagcaacctccccacggtgaagaagtttctgcagcctggca 673
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 134290913 aggccctgaaaaccagagtcagcaacctccccaccgtgaagaagtttctgcagcctggca 134290854
Query: 674 gccagaggaagcctcccatggatgagaaaaaattagaagaa 714
|||||||||||||||||||||||| ||||||||||||||||
Sbjct: 134290853 gccagaggaagcctcccatggatgcgaaaaaattagaagaa 134290813
Score = 149 bits (75), Expect = 3e-33
Identities = 117/131 (89%)
Strand = Plus / Minus
Query: 614 aggccctgaaaaccagagtcagcaacctccccacggtgaagaagtttctgcagcctggca 673
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 134316222 aggccctgaaaaccagagtcagcaacctccccaccgtgaagaagtttctgcagcctggca 134316163
Query: 674 gccagaggaagcctcccatggatgagaaaaaattagaagaagccaagaatattttccgga 733
|||||||||||||||||| |||||| ||| |||||| |||| | || |||||| |
Sbjct: 134316162 gccagaggaagcctcccactgatgaggaaagtttagaaaaagcaaggaggattttcaagt 134316103
Query: 734 ttaaataaagc 744
|||||||||||
Sbjct: 134316102 ttaaataaagc 134316092
Score = 115 bits (58), Expect = 5e-23
Identities = 121/142 (85%)
Strand = Plus / Minus
Query: 344 ttgatatgtatacagaaggtgtggcagatttgggtgaaatgatcttgctgttgccactgt 403
|||||||||| ||||||||| | |||||| | |||||||||||| |||| |||||| | |
Sbjct: 134319558 ttgatatgtacacagaaggtatagcagatataggtgaaatgatcatgcttttgccaatat 134319499
Query: 404 gcccacccaatgaaaaagatgccaaggtggcctcgatcaaagaaaaatcgacaaaccgtt 463
||||||| ||||||||||||| ||| |||||| ||||||||||| | | |||| ||
Sbjct: 134319498 gcccacctgatgaaaaagatgctaagatggccttgatcaaagaaagagtaagcaaccatt 134319439
Query: 464 atcttcctgcatttgaaaaagt 485
||||||||||||||||||||||
Sbjct: 134319438 atcttcctgcatttgaaaaagt 134319417
Score = 107 bits (54), Expect = 1e-20
Identities = 54/54 (100%)
Strand = Plus / Minus
Query: 155 agtttgaagagaaatttattaagactccagaagacctggataagttaacaaatg 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134298184 agtttgaagagaaatttattaagactccagaagacctggataagttaacaaatg 134298131
Score = 103 bits (52), Expect = 2e-19
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 218 tgctgttccagcaagtgcccatggttgagattgacgggatgaagctggtgcagacc 273
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 134388059 tgctgttccagcaagtgcccatggttgagattgacgggatgaagttggtgcagacc 134388004
Score = 95.6 bits (48), Expect = 4e-17
Identities = 87/100 (87%)
Strand = Plus / Minus
Query: 203 caaatgatgggagtttgctgttccagcaagtgcccatggttgagattgacgggatgaagc 262
|||| |||||||||||| |||||||||||||||| ||| |||| ||||| || ||||||
Sbjct: 134322104 caaaagatgggagtttgatgttccagcaagtgccaatgattgaaattgatggcatgaagt 134322045
Query: 263 tggtgcagaccagggccatcctcaactacatcgccaccaa 302
|||| |||||||| ||||| |||||||| ||||| |||||
Sbjct: 134322044 tggtccagaccagagccattctcaactatatcgctaccaa 134322005
Score = 87.7 bits (44), Expect = 1e-14
Identities = 44/44 (100%)
Strand = Plus / Minus
Query: 1 gcattgagttgctgagccaagtgggagacagcctttcctaaggt 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134303208 gcattgagttgctgagccaagtgggagacagcctttcctaaggt 134303165
Score = 87.7 bits (44), Expect = 1e-14
Identities = 44/44 (100%)
Strand = Plus / Minus
Query: 1 gcattgagttgctgagccaagtgggagacagcctttcctaaggt 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134312043 gcattgagttgctgagccaagtgggagacagcctttcctaaggt 134312000
Score = 75.8 bits (38), Expect = 4e-11
Identities = 77/90 (85%)
Strand = Plus / Minus
Query: 67 atcatggcggggaagcccattcttcactatttcaatggccgaggcagaatggagtgtatc 126
||||||||||||||||||| |||||||| ||| |||| |||||||| ||| ||||
Sbjct: 134325817 atcatggcggggaagcccaagcttcactacttcgatggacgaggcagggcagaggttatc 134325758
Query: 127 cggtggctcctggctgcagctggagtggag 156
|||||||| |||||| ||||||||||||||
Sbjct: 134325757 cggtggcttctggcttcagctggagtggag 134325728
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 34,256,209
Number of extensions: 233
Number of successful extensions: 233
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 231
Number of HSP's successfully gapped: 18
Length of query: 1006
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 985
Effective length of database: 2,808,413,156
Effective search space: 2766286958660
Effective search space used: 2766286958660
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)