Animal-Genome cDNA 20110601C-012716


Search to RefSeqBP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012716
         (1043 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001039627.1| dehydrogenase/reductase SDR family member 7 ...   508   e-144
Alignment   gi|NP_001030420.1| dehydrogenase/reductase SDR family member 7B...   146   3e-35
Alignment   gi|XP_002702202.1| PREDICTED: dehydrogenase/reductase SDR famil...   144   1e-34
Alignment   gi|NP_001039751.1| estradiol 17-beta-dehydrogenase 11 [Bos taur...    97   2e-20
Alignment   gi|NP_776592.1| retinol dehydrogenase 8 [Bos taurus].                 92   8e-19
Alignment   gi|NP_001116504.1| corticosteroid 11-beta-dehydrogenase isozyme...    92   1e-18
Alignment   gi|NP_001040081.1| 17-beta-hydroxysteroid dehydrogenase 13 [Bos...    92   1e-18
Alignment   gi|NP_001039384.1| 3-ketodihydrosphingosine reductase precursor...    89   5e-18
Alignment   gi|NP_996852.1| hydroxysteroid 11-beta-dehydrogenase 1-like pro...    89   6e-18
Alignment   gi|NP_001069264.1| retinol dehydrogenase 16 [Bos taurus].             85   1e-16

>ref|NP_001039627.1| dehydrogenase/reductase SDR family member 7 [Bos taurus].
          Length = 339

 Score =  508 bits (1307), Expect = e-144
 Identities = 250/311 (80%), Positives = 272/311 (87%)
 Frame = +1

Query: 106  MSWEXXXXXXXXXXXXXXXXXXXXXXXXDGDLTLLWAEWQGRRPEWELTDMVVWVTGASS 285
            MSWE                        D DLTLLWAEWQGRRPEWELTDMVVWVTGASS
Sbjct: 1    MSWELLLWLLALCALLALVVQLLRFLRADADLTLLWAEWQGRRPEWELTDMVVWVTGASS 60

Query: 286  GIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLDLANRSSHEV 465
            GIGEEL YQLSKLGVSLVLSARR+ ELERVKR+CLENG LK KDILILPLDL +RSSHE+
Sbjct: 61   GIGEELAYQLSKLGVSLVLSARRMHELERVKRKCLENGNLKEKDILILPLDLTDRSSHEM 120

Query: 466  ATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTKCVLPHMIEK 645
            ATKAVLQEFG+IDILVNNGGVSQR+LCVDTSLDV+KEL+E+NYLGTVSLTKCVLPHMIE+
Sbjct: 121  ATKAVLQEFGRIDILVNNGGVSQRALCVDTSLDVFKELIELNYLGTVSLTKCVLPHMIER 180

Query: 646  KQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGITVSNVCPGPVKSN 825
            KQGKI+TVNS +GIIAAPLS GYCASKHALRGFFNTLR+ELATYPGIT+SN+CPGPV+SN
Sbjct: 181  KQGKIVTVNSMVGIIAAPLSTGYCASKHALRGFFNTLRSELATYPGITISNICPGPVQSN 240

Query: 826  IVKNALTEEVTKTLGSDADQSHKMATSRCARLMLIAMANDLKEVWIAEQPFLAMAYLWQY 1005
            IVKNALTEEVTK  GS ADQS+KMATSRC RLML+AMANDLKEVWI++QPFL M YLWQY
Sbjct: 241  IVKNALTEEVTKPTGSTADQSYKMATSRCVRLMLVAMANDLKEVWISDQPFLLMIYLWQY 300

Query: 1006 IPTWAWWLTSK 1038
            +PT AWWLT+K
Sbjct: 301  MPTLAWWLTNK 311


>ref|NP_001030420.1| dehydrogenase/reductase SDR family member 7B [Bos taurus].
          Length = 325

 Score =  146 bits (368), Expect = 3e-35
 Identities = 89/247 (36%), Positives = 137/247 (55%), Gaps = 4/247 (1%)
 Frame = +1

Query: 259 VVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLEN---GILKGKDILIL 429
           VV +TGA+SG+G E        G  LVL  R  + LE + +    +   G+   K   + 
Sbjct: 54  VVVITGATSGLGRECARVFHAAGARLVLCGRNAEALEELSQELAASRAPGVQTHKPCTVT 113

Query: 430 PLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVS 609
             DLA+  +   A   +LQ FG +D+L+NN G+S R   VDTS DV K +ME NY G V+
Sbjct: 114 -FDLADPGAIAGAASEILQCFGHVDVLINNAGISYRGAIVDTSPDVDKRVMETNYFGPVA 172

Query: 610 LTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGIT 789
           LTK +LP MI ++QG ++ ++S  G I+ P    Y ASKHA + FF+ LR E+  +  I 
Sbjct: 173 LTKALLPAMIRRRQGHVVAISSIQGKISLPFRSAYAASKHATQAFFDCLRAEVEQH-DIE 231

Query: 790 VSNVCPGPVKSNIVKNALTEEVTKTLGSDADQSHKMATSRCARLMLIAMANDLKEVWIAE 969
           V+ + PG + +N+  NA+T + +K    D   +   +  + A+ +L A+    K+V +A+
Sbjct: 232 VTVISPGYIHTNLSLNAVTADGSKYGVMDETTAQGRSPVQVAQDILAALGKKKKDVVLAD 291

Query: 970 -QPFLAM 987
             P LA+
Sbjct: 292 PMPSLAV 298


>ref|XP_002702202.1| PREDICTED: dehydrogenase/reductase SDR family member 7B-like [Bos
           taurus].
          Length = 325

 Score =  144 bits (363), Expect = 1e-34
 Identities = 87/246 (35%), Positives = 136/246 (55%), Gaps = 3/246 (1%)
 Frame = +1

Query: 259 VVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGI--LKGKDILILP 432
           VV +TGA+SG+G E        G  LVL  R  + LE + +    +    ++      + 
Sbjct: 54  VVVITGATSGLGRECARVFHAAGARLVLCGRNAEALEELSQELAASRAPEVQTHKPCTVT 113

Query: 433 LDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSL 612
            DLA+  +   A   +LQ FG +D+L+NN G+S R   VDTS DV K +ME NY G V+L
Sbjct: 114 FDLADPGAIAGAASEILQCFGHVDVLINNAGISYRGAIVDTSPDVDKRVMETNYFGPVAL 173

Query: 613 TKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGITV 792
           TK +LP MI ++QG ++ ++S  G I+ P    Y ASKHA + FF+ LR E+  +  I V
Sbjct: 174 TKALLPAMIRRRQGHVVAISSIQGKISLPFRSAYAASKHATQAFFDCLRAEVEQH-DIEV 232

Query: 793 SNVCPGPVKSNIVKNALTEEVTKTLGSDADQSHKMATSRCARLMLIAMANDLKEVWIAE- 969
           + + PG + +N+  NA+T + +K    D   +   +  + A+ +L A+    K+V +A+ 
Sbjct: 233 TVISPGYIHTNLSLNAVTADGSKYGVMDETTAQGRSPVQVAQDILAALGKKKKDVVLADP 292

Query: 970 QPFLAM 987
            P LA+
Sbjct: 293 MPSLAV 298


>ref|NP_001039751.1| estradiol 17-beta-dehydrogenase 11 [Bos taurus].
          Length = 316

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 67/202 (33%), Positives = 91/202 (45%), Gaps = 2/202 (0%)
 Frame = +1

Query: 247 LTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILI 426
           +T  +V +TGA  GIG +  Y+ +KL   LVL       LE     C   G  K    ++
Sbjct: 50  VTGEIVLITGAGHGIGRQTAYEFAKLKCKLVLWDINKHGLEETATECKRLGA-KAHTFVV 108

Query: 427 LPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTV 606
              D +NR     + K V  E G + ILVNN GV   S    T     ++  EVN L   
Sbjct: 109 ---DCSNREDIYSSAKKVKAEVGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNILAHF 165

Query: 607 SLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATY--P 780
             TK  LP M++   G I+TV S  G    P    YC+SK A  GF   L  EL+     
Sbjct: 166 WTTKAFLPEMMKNNHGHIVTVASAAGHTGVPFLLAYCSSKFAAVGFHKALTEELSALKRT 225

Query: 781 GITVSNVCPGPVKSNIVKNALT 846
           G+  + +CP  + +  +KN  T
Sbjct: 226 GVKTTCLCPNFINTGFIKNPST 247


>ref|NP_776592.1| retinol dehydrogenase 8 [Bos taurus].
          Length = 312

 Score = 92.0 bits (227), Expect = 8e-19
 Identities = 67/208 (32%), Positives = 100/208 (48%), Gaps = 1/208 (0%)
 Frame = +1

Query: 262 VWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLDL 441
           V ++G SSGIG EL  QL+            +++L +        G   G+ + +  LD+
Sbjct: 8   VLISGCSSGIGLELAVQLAHDPRQRYQVVATMRDLGKKGTLETAAGEALGQTLTVAQLDV 67

Query: 442 ANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTKC 621
              S   VA      + G++D+LVNN GV         SL   + + + N+ G V L K 
Sbjct: 68  C--SDESVAQCLNCIQGGEVDVLVNNAGVGLVGPLEGLSLAAMQNVFDTNFFGAVRLVKA 125

Query: 622 VLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGITVSNV 801
           VLP M  ++QG I+ V+S MG+     +  Y ASK A+ GFF +L  +L  +  I +S V
Sbjct: 126 VLPSMKRRRQGHIVVVSSVMGLQGVVFNEVYAASKFAMEGFFESLAVQLLQF-NIFISLV 184

Query: 802 CPGPVKSNIVKNALTEEVTKTL-GSDAD 882
            PGPV +      L +  T    G+D D
Sbjct: 185 EPGPVVTEFEGKLLEQVSTAEFPGTDPD 212


>ref|NP_001116504.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Bos taurus].
          Length = 292

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 67/205 (32%), Positives = 104/205 (50%), Gaps = 1/205 (0%)
 Frame = +1

Query: 232 RPEWELTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKG 411
           RPE  L    V VTGAS GIG E+ Y L+++G  +V++AR  + L++V  RCLE G    
Sbjct: 28  RPEM-LRGKRVIVTGASKGIGREMAYHLARMGAHVVVTARSEESLKKVVSRCLELGAASA 86

Query: 412 KDILILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVN 591
                +   + N +  E       +  G +D+L+ N             + + +  +EVN
Sbjct: 87  H---YVAGTMENMTFAEQFVAKAGELVGGLDMLILNHIHYTPLGVFSNDIHLLRRTLEVN 143

Query: 592 YLGTVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTEL- 768
            L  V L+   LP M+++  G I+ V+S  G IA PL   Y ASK AL GFF++LR E  
Sbjct: 144 LLSYVVLSTAALP-MLKQTNGSIVVVSSIAGKIACPLVAAYSASKFALDGFFSSLRMEYE 202

Query: 769 ATYPGITVSNVCPGPVKSNIVKNAL 843
           AT   ++++    G + ++    A+
Sbjct: 203 ATKVNVSITLCILGLIDTDTAMKAV 227


>ref|NP_001040081.1| 17-beta-hydroxysteroid dehydrogenase 13 [Bos taurus].
          Length = 300

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 64/198 (32%), Positives = 90/198 (45%), Gaps = 2/198 (1%)
 Frame = +1

Query: 259 VVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLD 438
           +V +TGA  GIG +  Y+ +K    LVL       +E     C + G        +  +D
Sbjct: 38  IVLITGAGHGIGRQTAYEFAKRKSRLVLWDINKHGVEETAAECRKLGATTH----VFVVD 93

Query: 439 LANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTK 618
            +NR     +   V +E G + I+VNN G    +  + T  +   +  EVN LG   +TK
Sbjct: 94  CSNREEIYSSVNQVKKEVGDVTIVVNNAGAIYPADLLSTKDEEITKTFEVNILGHFWITK 153

Query: 619 CVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATY--PGITV 792
            +LP MI +  G I+TV S  G    P    YC+SK A  GF   L +EL      GI  
Sbjct: 154 ALLPSMIRRNHGHIVTVASVCGHGVIPYLIPYCSSKFAAVGFHRALTSELEALGKTGIKT 213

Query: 793 SNVCPGPVKSNIVKNALT 846
           S +CP  V +   KN  T
Sbjct: 214 SCLCPVFVNTGFTKNPST 231


>ref|NP_001039384.1| 3-ketodihydrosphingosine reductase precursor [Bos taurus].
          Length = 331

 Score = 89.4 bits (220), Expect = 5e-18
 Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 6/207 (2%)
 Frame = +1

Query: 262 VWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLDL 441
           V VTG SSGIG+ +  +  K G  + L AR   +L + K+   ++ I   + +L + +D+
Sbjct: 35  VVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKLLQAKKEIEKHSINDKQVVLCISVDV 94

Query: 442 ANRSSH-EVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTK 618
           +   S  E   K   ++ G +D+LVN  G+S      D  +  ++ LM +NYLG+V  ++
Sbjct: 95  SQDYSQVENVIKQAQEKLGPVDMLVNCAGMSLSGKFEDLEVSTFERLMSINYLGSVYPSR 154

Query: 619 CVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATY-PGITVS 795
            V+  M E++ G+++ V+S  G +       Y +SK ALRG    L+ E+  Y   +TV+
Sbjct: 155 AVIATMKERRMGRVVFVSSQAGQLGLFGYTAYSSSKFALRGLAEALQMEVKPYNVYVTVA 214

Query: 796 ----NVCPGPVKSNIVKNALTEEVTKT 864
                  PG  K N  K   T  +++T
Sbjct: 215 YPPDTDTPGFAKENQTKPLETRLISET 241


>ref|NP_996852.1| hydroxysteroid 11-beta-dehydrogenase 1-like protein precursor [Bos
           taurus].
          Length = 287

 Score = 89.0 bits (219), Expect = 6e-18
 Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 1/170 (0%)
 Frame = +1

Query: 262 VWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLDL 441
           V +TG S+GIGEEL Y  ++LG  LVL+A     L++V   C + G  K   +  +  D+
Sbjct: 32  VLLTGVSAGIGEELAYHYARLGSHLVLTAHTEALLQQVVGNCRKLGAPK---VFYIAADM 88

Query: 442 ANRSSHEVATKAVLQEFGKIDILV-NNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTK 618
           A+    E   +  L + G +D LV N+ G +     V +S    + LM++N+L  V LT 
Sbjct: 89  ASPEVPERVVQFALDKLGGLDYLVLNHLGAAPAGTRVRSSQST-RWLMQMNFLSYVQLTS 147

Query: 619 CVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTEL 768
             LP + + K G ++ V+S +G +    S  Y A+K AL  FF++LR EL
Sbjct: 148 SALPSLTDSK-GSLVVVSSLLGRVPTSFSSPYSAAKFALDSFFSSLRREL 196


>ref|NP_001069264.1| retinol dehydrogenase 16 [Bos taurus].
          Length = 317

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 62/198 (31%), Positives = 105/198 (53%), Gaps = 4/198 (2%)
 Frame = +1

Query: 247 LTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILI 426
           L D  V++TG  SG G  L  QL   G+ ++ +    +  E+++ +  +        +  
Sbjct: 27  LRDKFVFITGCDSGFGNLLARQLDLRGLRVLAACLTEKGAEQLRNQTSDR-------LQT 79

Query: 427 LPLDLANRSSHEVATKAVLQEFGKIDI--LVNNGGVSQRSLCVD--TSLDVYKELMEVNY 594
           + LD+    S   AT+ V +  G   +  LVNN G+S  +   +  T  D  K +++VN 
Sbjct: 80  VILDVTKTDSVAAATEWVKERVGDRGLWGLVNNAGISTPTAPNEWLTKQDFMK-ILDVNL 138

Query: 595 LGTVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELAT 774
           LG + +T  VLP ++ K +G+++ V+S MG +A  L GGYC SK+ +  F ++LR EL +
Sbjct: 139 LGVIDVTLSVLP-LVRKARGRVVNVSSIMGRVAL-LGGGYCMSKYGVEAFSDSLRREL-S 195

Query: 775 YPGITVSNVCPGPVKSNI 828
           Y G+ V  + PG  K+ +
Sbjct: 196 YFGVKVVMIEPGYFKTAV 213


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 39,405,675
Number of extensions: 1040282
Number of successful extensions: 2682
Number of sequences better than 1.0e-05: 52
Number of HSP's gapped: 2624
Number of HSP's successfully gapped: 52
Length of query: 347
Length of database: 17,681,374
Length adjustment: 103
Effective length of query: 244
Effective length of database: 14,273,310
Effective search space: 3482687640
Effective search space used: 3482687640
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqCP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012716
         (1043 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_537465.2| PREDICTED: similar to Dehydrogenase/reductase S...   516   e-146
Alignment   gi|XP_536670.2| PREDICTED: similar to CG7601-PA [Canis familiar...   149   6e-36
Alignment   gi|XP_536640.2| PREDICTED: similar to CG7601-PA isoform 1 [Cani...   105   5e-23
Alignment   gi|XP_861006.1| PREDICTED: similar to CG7601-PA isoform 2 [Cani...   104   1e-22
Alignment   gi|NP_001005756.1| corticosteroid 11-beta-dehydrogenase isozyme...    94   3e-19
Alignment   gi|XP_544970.2| PREDICTED: similar to dehydrogenase/reductase (...    93   4e-19
Alignment   gi|XP_535646.2| PREDICTED: similar to alcohol dehydrogenase PAN...    93   4e-19
Alignment   gi|XP_850000.1| PREDICTED: similar to hydroxysteroid (17-beta) ...    93   4e-19
Alignment   gi|XP_854042.1| PREDICTED: similar to retinol dehydrogenase 8 (...    93   5e-19
Alignment   gi|XP_852048.1| PREDICTED: similar to follicular lymphoma varia...    89   7e-18

>ref|XP_537465.2| PREDICTED: similar to Dehydrogenase/reductase SDR family member 7
            precursor (Retinal short-chain dehydrogenase/reductase 4)
            (retSDR4) [Canis familiaris].
          Length = 437

 Score =  516 bits (1329), Expect = e-146
 Identities = 253/320 (79%), Positives = 274/320 (85%)
 Frame = +1

Query: 76   SPQSRACAAVMSWEXXXXXXXXXXXXXXXXXXXXXXXXDGDLTLLWAEWQGRRPEWELTD 255
            SP SRA AA MSWE                        DGDLTLLWAEWQGRRPEWELTD
Sbjct: 89   SPASRARAAAMSWELLLWLLALGALLALLVQLLRFVRADGDLTLLWAEWQGRRPEWELTD 148

Query: 256  MVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPL 435
            MV+WVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILK KDI +LPL
Sbjct: 149  MVIWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKEKDIFVLPL 208

Query: 436  DLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLT 615
            DL +RSSHE ATKAVLQEFGKIDILVNNGG SQRSLCVDT+LDV+KELME+NYLGTVSLT
Sbjct: 209  DLTDRSSHEAATKAVLQEFGKIDILVNNGGQSQRSLCVDTNLDVFKELMELNYLGTVSLT 268

Query: 616  KCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGITVS 795
             CVLPHMIE+KQGKI+TVNS +GII+APLS GYCASKHALRGFFN LR ELA YPGI +S
Sbjct: 269  MCVLPHMIERKQGKIVTVNSLLGIISAPLSSGYCASKHALRGFFNCLRVELAEYPGIVIS 328

Query: 796  NVCPGPVKSNIVKNALTEEVTKTLGSDADQSHKMATSRCARLMLIAMANDLKEVWIAEQP 975
            N+CPGPV+SNIVKN+LTEEVTK++G D  QSHKMATSRC RLMLI+MANDLKEVWIA+ P
Sbjct: 329  NICPGPVQSNIVKNSLTEEVTKSVGIDTVQSHKMATSRCVRLMLISMANDLKEVWIADHP 388

Query: 976  FLAMAYLWQYIPTWAWWLTS 1035
            FL + YLWQY+PTWAWWLT+
Sbjct: 389  FLLVVYLWQYMPTWAWWLTN 408


>ref|XP_536670.2| PREDICTED: similar to CG7601-PA [Canis familiaris].
          Length = 325

 Score =  149 bits (375), Expect = 6e-36
 Identities = 88/243 (36%), Positives = 136/243 (55%), Gaps = 2/243 (0%)
 Frame = +1

Query: 247 LTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDI-- 420
           L + VV +TGA+SG+G E        G  LVL  R  + LE + +    +   K +    
Sbjct: 50  LRNAVVVITGATSGLGRECARVFYTAGAKLVLCGRNQKALEELTKELTASPATKVQTHKP 109

Query: 421 LILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLG 600
            ++  DLA+  +   AT  +LQ FG +D+L+NN G+S R   VDT+ DV K++ME NY G
Sbjct: 110 YMVTFDLADPGAIIAATAEILQCFGYVDVLINNAGISYRGAIVDTTTDVDKKVMETNYFG 169

Query: 601 TVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYP 780
            V+LTK +LP MI+++QG I+ ++S  G I+ P    Y ASKHA + FF+ LR E+  Y 
Sbjct: 170 PVALTKALLPSMIKRRQGHIVVISSIQGKISIPFRSAYAASKHATQAFFDCLRAEMEQYE 229

Query: 781 GITVSNVCPGPVKSNIVKNALTEEVTKTLGSDADQSHKMATSRCARLMLIAMANDLKEVW 960
            I V+ + PG + +N+  NA+T + +     D   +   +    AR +L A+    K+V 
Sbjct: 230 -IEVTVISPGYIHTNLSLNAVTADGSTYGVMDKTTAQGRSPVEVARDVLAAVGKKKKDVI 288

Query: 961 IAE 969
           +A+
Sbjct: 289 LAD 291


>ref|XP_536640.2| PREDICTED: similar to CG7601-PA isoform 1 [Canis familiaris].
          Length = 311

 Score =  105 bits (263), Expect = 5e-23
 Identities = 66/194 (34%), Positives = 104/194 (53%), Gaps = 6/194 (3%)
 Frame = +1

Query: 259 VVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDIL----- 423
           VV +T A SG+G+E        G  LVL  +  + L+      L + ++   D       
Sbjct: 39  VVVITDAISGLGKECARVFHTGGARLVLCGKNWERLQ-----ILYDALISVADPSKTFTP 93

Query: 424 -ILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLG 600
            ++ LDL++ S  +   K VL  +G +DIL+NN  +  +      SL++ K++M+ NY G
Sbjct: 94  KLVLLDLSDISCVQDVAKEVLDCYGCVDILINNASMKVKGPAHKISLELDKKIMDANYFG 153

Query: 601 TVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYP 780
            ++LTK +LP MI ++ G+I+ VN+  G +  P    Y ASKHA  GFF+ LR E+  Y 
Sbjct: 154 PITLTKALLPDMISRRTGQIVLVNNIQGKLGIPFRTAYAASKHAALGFFDCLRAEVEEY- 212

Query: 781 GITVSNVCPGPVKS 822
            + VS V P  ++S
Sbjct: 213 DVVVSTVSPTFIRS 226


>ref|XP_861006.1| PREDICTED: similar to CG7601-PA isoform 2 [Canis familiaris].
          Length = 317

 Score =  104 bits (260), Expect = 1e-22
 Identities = 65/189 (34%), Positives = 101/189 (53%), Gaps = 6/189 (3%)
 Frame = +1

Query: 259 VVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDIL----- 423
           VV +T A SG+G+E        G  LVL  +  + L+      L + ++   D       
Sbjct: 39  VVVITDAISGLGKECARVFHTGGARLVLCGKNWERLQ-----ILYDALISVADPSKTFTP 93

Query: 424 -ILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLG 600
            ++ LDL++ S  +   K VL  +G +DIL+NN  +  +      SL++ K++M+ NY G
Sbjct: 94  KLVLLDLSDISCVQDVAKEVLDCYGCVDILINNASMKVKGPAHKISLELDKKIMDANYFG 153

Query: 601 TVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYP 780
            ++LTK +LP MI ++ G+I+ VN+  G +  P    Y ASKHA  GFF+ LR E+  Y 
Sbjct: 154 PITLTKALLPDMISRRTGQIVLVNNIQGKLGIPFRTAYAASKHAALGFFDCLRAEVEEY- 212

Query: 781 GITVSNVCP 807
            + VS V P
Sbjct: 213 DVVVSTVSP 221


>ref|NP_001005756.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Canis lupus
           familiaris].
          Length = 293

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 66/219 (30%), Positives = 115/219 (52%), Gaps = 1/219 (0%)
 Frame = +1

Query: 232 RPEWELTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKG 411
           RPE  L    V VTGAS GIGE++ Y L+K+G  +V++AR  + L++V   CLE G    
Sbjct: 28  RPEM-LQGKKVIVTGASKGIGEQMAYHLAKMGAHVVVTARSKETLKKVVSHCLELGAASA 86

Query: 412 KDILILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVN 591
                +P  + + +  E       +  G +D+L+ N   +         + + +  MEVN
Sbjct: 87  H---YIPGTMEDMTFAEQFVAKAGKLMGGLDMLILNHITNTSMNLFSGDIHLVRRSMEVN 143

Query: 592 YLGTVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTE-L 768
           +L  V L+   LP M+++  G I+ V+S  G +++PL   Y ASK AL GFF+++R E  
Sbjct: 144 FLSYVVLSAAALP-MLKQSNGSIVVVSSKAGKMSSPLVAPYSASKFALDGFFSSVRMEHS 202

Query: 769 ATYPGITVSNVCPGPVKSNIVKNALTEEVTKTLGSDADQ 885
            T   ++++    G + ++    A++  +  T+G+ + +
Sbjct: 203 VTKVNVSITLCILGLINTDTAMKAVS-GILSTVGASSKE 240


>ref|XP_544970.2| PREDICTED: similar to dehydrogenase/reductase (SDR family) member 8
           [Canis familiaris].
          Length = 300

 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 66/202 (32%), Positives = 89/202 (44%), Gaps = 2/202 (0%)
 Frame = +1

Query: 247 LTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILI 426
           +T  +V +TGA  GIG    Y+ +KL   LVL       +E     C       G  +  
Sbjct: 34  VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGIEDTAAECRR----LGAKVHA 89

Query: 427 LPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTV 606
             +D +NR     +   V  E G + ILVNN GV   S    T     ++  EVN L   
Sbjct: 90  FVVDCSNREDIYGSATKVKAEVGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHF 149

Query: 607 SLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATY--P 780
             TK  LP M++   G I+TV S  G    P    YC+SK A  GF   L  ELA     
Sbjct: 150 WTTKAFLPVMMKNNHGHIVTVASAAGHTGVPFLLAYCSSKFAAVGFHKALTEELAALERT 209

Query: 781 GITVSNVCPGPVKSNIVKNALT 846
           G+  + +CP  + +  +KNA T
Sbjct: 210 GVKTTCLCPNFINTGFIKNAST 231


>ref|XP_535646.2| PREDICTED: similar to alcohol dehydrogenase PAN1B-like isoform 1
           [Canis familiaris].
          Length = 271

 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 66/198 (33%), Positives = 90/198 (45%), Gaps = 2/198 (1%)
 Frame = +1

Query: 259 VVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLD 438
           +V +TGA  GIG    Y+ +K    LVL       +E     C +     G  +    +D
Sbjct: 38  IVLITGAGHGIGRWTAYEFAKQKSRLVLWDINKHGVEETAAECRK----LGATVHTFVVD 93

Query: 439 LANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTK 618
             NR     + K V +E G + ILVNN G    +  + T  +   +  E+N LG   +TK
Sbjct: 94  CGNREDIYNSVKQVKKEVGDVTILVNNAGTVYPADLLSTKDEEITKTFEINILGHFWITK 153

Query: 619 CVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELAT--YPGITV 792
            +LP MI++  G I+TV S  G    P    YC+SK A  GF   L  EL T    GI  
Sbjct: 154 ALLPSMIKRNHGHIVTVASVCGHGVIPYLIPYCSSKFAAVGFHRALTLELQTLGITGIKT 213

Query: 793 SNVCPGPVKSNIVKNALT 846
           S +CP  V +   KN  T
Sbjct: 214 SCLCPVFVNTGFTKNPST 231


>ref|XP_850000.1| PREDICTED: similar to hydroxysteroid (17-beta) dehydrogenase 13
           isoform 2 [Canis familiaris].
          Length = 300

 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 66/198 (33%), Positives = 90/198 (45%), Gaps = 2/198 (1%)
 Frame = +1

Query: 259 VVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLD 438
           +V +TGA  GIG    Y+ +K    LVL       +E     C +     G  +    +D
Sbjct: 38  IVLITGAGHGIGRWTAYEFAKQKSRLVLWDINKHGVEETAAECRK----LGATVHTFVVD 93

Query: 439 LANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTK 618
             NR     + K V +E G + ILVNN G    +  + T  +   +  E+N LG   +TK
Sbjct: 94  CGNREDIYNSVKQVKKEVGDVTILVNNAGTVYPADLLSTKDEEITKTFEINILGHFWITK 153

Query: 619 CVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELAT--YPGITV 792
            +LP MI++  G I+TV S  G    P    YC+SK A  GF   L  EL T    GI  
Sbjct: 154 ALLPSMIKRNHGHIVTVASVCGHGVIPYLIPYCSSKFAAVGFHRALTLELQTLGITGIKT 213

Query: 793 SNVCPGPVKSNIVKNALT 846
           S +CP  V +   KN  T
Sbjct: 214 SCLCPVFVNTGFTKNPST 231


>ref|XP_854042.1| PREDICTED: similar to retinol dehydrogenase 8 (all-trans) [Canis
           familiaris].
          Length = 312

 Score = 92.8 bits (229), Expect = 5e-19
 Identities = 65/207 (31%), Positives = 105/207 (50%)
 Frame = +1

Query: 262 VWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLDL 441
           V ++G SSGIG EL  QL+            +++L +        G   G+ + +  LD+
Sbjct: 8   VLISGCSSGIGLELAVQLAHDHRQRYRVVATMRDLGKKGTLETAAGEALGQTLTVAQLDV 67

Query: 442 ANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTKC 621
            +  S  VA      + G++D+LVNN GV         SL   + +++ N+ G V L + 
Sbjct: 68  CSEES--VAQCLSCIQGGEVDVLVNNAGVGLVGPLEGLSLAAMQNVLDTNFFGAVRLVRA 125

Query: 622 VLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGITVSNV 801
           VLP M  +++G I+ ++S MG+     +  Y ASK AL GFF +L  +L  +  I ++ V
Sbjct: 126 VLPGMKRRRKGHIVVISSVMGLQGVVFNEIYAASKFALEGFFESLAVQLLQF-NIFITLV 184

Query: 802 CPGPVKSNIVKNALTEEVTKTLGSDAD 882
            PGPV ++  +  L E+V+ T   D D
Sbjct: 185 EPGPVATDF-EGKLLEQVSTTEFPDTD 210


>ref|XP_852048.1| PREDICTED: similar to follicular lymphoma variant translocation 1
           [Canis familiaris].
          Length = 509

 Score = 89.0 bits (219), Expect = 7e-18
 Identities = 55/172 (31%), Positives = 92/172 (53%), Gaps = 1/172 (0%)
 Frame = +1

Query: 268 VTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLDLAN 447
           VTG SSGIG+ +  +  K G  + L AR   +L + K+   ++ I   + +L + +D++ 
Sbjct: 144 VTGGSSGIGKCIAIECYKQGAFITLVARNEDKLLQAKKEIEKHSINDKQVVLCISVDVSQ 203

Query: 448 RSSH-EVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTKCV 624
             S  E   K   ++ G +D+LVN  G+S      D  +  ++ LM VNYLG+V  ++ V
Sbjct: 204 DYSQVENVIKQAQEKLGPVDMLVNCAGMSLSGKFEDLEVSTFERLMSVNYLGSVYPSRAV 263

Query: 625 LPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYP 780
           +  M E++ G+I+ V+S  G +       Y +SK A+RG    L+ E+  YP
Sbjct: 264 ITTMKERRVGRIVFVSSQAGQLGLFGFTAYSSSKFAIRGLAEALQMEVEIYP 315


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 41,027,480
Number of extensions: 1064062
Number of successful extensions: 2812
Number of sequences better than 1.0e-05: 60
Number of HSP's gapped: 2741
Number of HSP's successfully gapped: 60
Length of query: 347
Length of database: 18,874,504
Length adjustment: 104
Effective length of query: 243
Effective length of database: 15,407,560
Effective search space: 3744037080
Effective search space used: 3744037080
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to RefSeqSP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012716
         (1043 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_001928783.1| PREDICTED: dehydrogenase/reductase SDR famil...   570   e-163
Alignment   gi|XP_003132036.2| PREDICTED: dehydrogenase/reductase SDR famil...   103   2e-22
Alignment   gi|XP_003123297.1| PREDICTED: LOW QUALITY PROTEIN: retinol dehy...    96   3e-20
Alignment   gi|XP_001925948.1| PREDICTED: 3-ketodihydrosphingosine reductas...    92   5e-19
Alignment   gi|XP_003129386.2| PREDICTED: estradiol 17-beta-dehydrogenase 1...    90   2e-18
Alignment   gi|NP_001230551.1| hydroxysteroid (17-beta) dehydrogenase 13 [S...    90   2e-18
Alignment   gi|XP_003123133.1| PREDICTED: hydroxysteroid 11-beta-dehydrogen...    89   3e-18
Alignment   gi|NP_001230795.1| retinol dehydrogenase 16 (all-trans) [Sus sc...    87   2e-17
Alignment   gi|NP_999413.1| corticosteroid 11-beta-dehydrogenase isozyme 1 ...    84   1e-16
Alignment   gi|NP_001182297.1| epidermal retinol dehydrogenase 2 [Sus scrof...    80   2e-15

>ref|XP_001928783.1| PREDICTED: dehydrogenase/reductase SDR family member 7 [Sus scrofa].
          Length = 339

 Score =  570 bits (1469), Expect = e-163
 Identities = 287/312 (91%), Positives = 288/312 (92%)
 Frame = +1

Query: 106  MSWEXXXXXXXXXXXXXXXXXXXXXXXXDGDLTLLWAEWQGRRPEWELTDMVVWVTGASS 285
            MSWE                        DGDLTLLWAEWQGRRPEWELTDMVVWVTGASS
Sbjct: 1    MSWELFLWLLALCVLLALVVQLLRFLRADGDLTLLWAEWQGRRPEWELTDMVVWVTGASS 60

Query: 286  GIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLDLANRSSHEV 465
            GIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLDLANRSSHEV
Sbjct: 61   GIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLDLANRSSHEV 120

Query: 466  ATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTKCVLPHMIEK 645
            ATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTKCVLPHMIEK
Sbjct: 121  ATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTKCVLPHMIEK 180

Query: 646  KQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGITVSNVCPGPVKSN 825
            KQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGITVSNVCPGPVKSN
Sbjct: 181  KQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGITVSNVCPGPVKSN 240

Query: 826  IVKNALTEEVTKTLGSDADQSHKMATSRCARLMLIAMANDLKEVWIAEQPFLAMAYLWQY 1005
            IVKNALTEEVTKTLGSDADQSHKMATSRCARLMLIAMANDLKEVWIAEQPFL+MAYLWQY
Sbjct: 241  IVKNALTEEVTKTLGSDADQSHKMATSRCARLMLIAMANDLKEVWIAEQPFLSMAYLWQY 300

Query: 1006 IPTWAWWLTSKI 1041
            IPTWAWWLTSKI
Sbjct: 301  IPTWAWWLTSKI 312


>ref|XP_003132036.2| PREDICTED: dehydrogenase/reductase SDR family member 7C-like [Sus
           scrofa].
          Length = 311

 Score =  103 bits (256), Expect = 2e-22
 Identities = 63/189 (33%), Positives = 103/189 (54%), Gaps = 1/189 (0%)
 Frame = +1

Query: 259 VVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGI-LKGKDILILPL 435
           VV +T A SG+G+E        G  LVL  +  + L+ +    +      K     ++ L
Sbjct: 39  VVVITDAISGLGKECARVFHTGGARLVLCGKNWERLQTLYDALISVADPSKTFTPKLVLL 98

Query: 436 DLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLT 615
           DL++ S  +   K VL  +G +DIL++N  +  +      SL++ K++M+ NY G ++LT
Sbjct: 99  DLSDISCVQDVAKEVLDCYGCVDILISNASMKVKGPAHKISLELDKKIMDANYFGPITLT 158

Query: 616 KCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGITVS 795
           K +LP+MI ++ G+I+ VN+  G +  P    Y ASKHA  GFF+ LR E+  +  + VS
Sbjct: 159 KALLPNMISRRTGQIVLVNNIQGRLGIPFRTAYAASKHAALGFFDCLRAEVEEF-DVVVS 217

Query: 796 NVCPGPVKS 822
            V P  ++S
Sbjct: 218 TVSPTFIRS 226


>ref|XP_003123297.1| PREDICTED: LOW QUALITY PROTEIN: retinol dehydrogenase 8-like [Sus
           scrofa].
          Length = 332

 Score = 96.3 bits (238), Expect = 3e-20
 Identities = 68/212 (32%), Positives = 103/212 (48%), Gaps = 1/212 (0%)
 Frame = +1

Query: 250 TDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILIL 429
           T   V ++G SSGIG EL  QL++           +++L +        G   G+ + + 
Sbjct: 24  TPRTVLISGCSSGIGLELAVQLARDPKQRYHVVATMRDLGKKGTLEAAAGEALGQTLTVA 83

Query: 430 PLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVS 609
            LD+   S   VA      + G++D+LVNN GV         SL   + + + N+ G V 
Sbjct: 84  QLDVC--SDESVAQCLSCIQGGEVDVLVNNAGVGLVGPLEGLSLAAMQNVFDTNFFGAVR 141

Query: 610 LTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGIT 789
           L K VLP M  ++QG I+ V+S MG+     +  Y ASK A+ GFF +L  +L  +  I 
Sbjct: 142 LVKAVLPGMKRRRQGHIVVVSSVMGLQGVVFNEVYAASKFAIEGFFESLAVQLLQF-NIF 200

Query: 790 VSNVCPGPVKSNIVKNALTEEVTKTL-GSDAD 882
           +S V PGPV +   +  L +  T    G+D D
Sbjct: 201 ISLVEPGPVATEFERKLLEQVSTAEFPGTDPD 232


>ref|XP_001925948.1| PREDICTED: 3-ketodihydrosphingosine reductase-like [Sus scrofa].
          Length = 332

 Score = 92.0 bits (227), Expect = 5e-19
 Identities = 72/263 (27%), Positives = 122/263 (46%), Gaps = 31/263 (11%)
 Frame = +1

Query: 262 VWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLDL 441
           V VTG SSGIG+ +  +  K G  + L AR   +L + K+   ++ I   + +L + +D+
Sbjct: 35  VVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKLLQAKKEIEKHSINDKQVVLCISVDV 94

Query: 442 ANRSSH-EVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTK 618
           +   S  E   K   ++ G +D+LVN  G+S      D  +  ++ LM VNYLG+V  ++
Sbjct: 95  SQDYSQVENVIKQAQEKLGPVDMLVNCAGMSLSGKFEDLEVSTFERLMSVNYLGSVYPSR 154

Query: 619 CVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATY------- 777
            V+  M E++ G+I+ V+S  G +       Y +SK A+RG    L+ E+  Y       
Sbjct: 155 AVITTMKERRVGRIVFVSSQAGQLGLFGFTAYSSSKFAIRGLAEALQMEVKPYNVYVTVA 214

Query: 778 -------PGITVSN---------------VC-PGPVKSNIVKNALTEEVTKTLGSDADQS 888
                  PG    N               VC P  V   IVK+A+      ++GSD    
Sbjct: 215 YPPDTDTPGFAEENKTKPLETRLISETTSVCKPEQVAKQIVKDAIQGNFNSSIGSD---G 271

Query: 889 HKMATSRCARLMLIAMANDLKEV 957
           + +++  C    + ++   L++V
Sbjct: 272 YMLSSLTCGMAPVTSITEGLQQV 294


>ref|XP_003129386.2| PREDICTED: estradiol 17-beta-dehydrogenase 11-like [Sus scrofa].
          Length = 313

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 67/216 (31%), Positives = 94/216 (43%), Gaps = 4/216 (1%)
 Frame = +1

Query: 247 LTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILI 426
           +T  +V +TGA  G+G    ++ +KL   LVL       LE     C       G     
Sbjct: 34  VTGEIVLITGAGHGLGRLTAFEFAKLKCKLVLWDINKHGLEETADECKR----LGSKAHA 89

Query: 427 LPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTV 606
             +D ++R     + K V  E G + ILVNN GV   S    T     ++  EVN L   
Sbjct: 90  FVVDCSDREDIYSSAKKVKAEVGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNILAHF 149

Query: 607 SLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATY--P 780
             TK  LP M++   G I+TV S  G    P    YC+SK A  GF   L  ELA     
Sbjct: 150 WTTKAFLPAMMKNNHGHIVTVASAAGHAGIPFLLAYCSSKFAAVGFHKALTEELAALKRT 209

Query: 781 GITVSNVCPGPVKSNIVKNALTE--EVTKTLGSDAD 882
           G+  + +CP  + +  +KN   E   + KT  S+ +
Sbjct: 210 GVKTTCLCPNFINTGFIKNPRKEIDFIGKTCSSNTE 245


>ref|NP_001230551.1| hydroxysteroid (17-beta) dehydrogenase 13 [Sus scrofa].
          Length = 300

 Score = 89.7 bits (221), Expect = 2e-18
 Identities = 65/198 (32%), Positives = 89/198 (44%), Gaps = 2/198 (1%)
 Frame = +1

Query: 259 VVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLD 438
           +V VTGA  GIG ++ Y+ +K    LVL       LE     C + G      ++    D
Sbjct: 38  IVLVTGAGHGIGRKIAYEFAKRKSRLVLWDINKHGLEETAAECKKLGATTHAFVV----D 93

Query: 439 LANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTK 618
            +NR     +   V +E G I I+VNN G    +  + T  +      EVN LG   +TK
Sbjct: 94  CSNREEIYNSVNQVKKEVGDITIVVNNAGTIYPADLLSTKDEEITITFEVNILGHFWITK 153

Query: 619 CVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATY--PGITV 792
            +LP M+ +  G ++TV S  G    P    YC+SK A  GF   L  EL      GI  
Sbjct: 154 ALLPAMMSRNHGHVVTVASLCGHGVIPYLIPYCSSKFAAVGFHRALTAELEAVGKTGIKT 213

Query: 793 SNVCPGPVKSNIVKNALT 846
           S +CP  V +   KN  T
Sbjct: 214 SCLCPVFVNTGFTKNPST 231


>ref|XP_003123133.1| PREDICTED: hydroxysteroid 11-beta-dehydrogenase 1-like protein-like
           [Sus scrofa].
          Length = 293

 Score = 89.4 bits (220), Expect = 3e-18
 Identities = 57/169 (33%), Positives = 90/169 (53%)
 Frame = +1

Query: 262 VWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLDL 441
           V +TGAS+G+GEEL Y  ++LG  LVL+A     L++V   C + G  K   +  +  D+
Sbjct: 38  VLLTGASAGVGEELAYHYARLGSHLVLTAHTEALLQKVVGNCRKLGAPK---VFYIAADM 94

Query: 442 ANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTKC 621
           A+    E   +  L + G +D LV N   +  +     S    + L++VN++  V LT  
Sbjct: 95  ASPDVPERVVQFALDKLGGLDYLVLNHLGAAPAGTRARSAQAIRWLLQVNFISYVQLTSL 154

Query: 622 VLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTEL 768
            LP + + K G ++ V+S +G +    S  Y A+K AL  FF++LR EL
Sbjct: 155 ALPSLTDSK-GSLVVVSSLLGRVPTSFSSPYSAAKFALDSFFDSLRREL 202


>ref|NP_001230795.1| retinol dehydrogenase 16 (all-trans) [Sus scrofa].
          Length = 317

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 69/230 (30%), Positives = 116/230 (50%), Gaps = 5/230 (2%)
 Frame = +1

Query: 220 WQGRRPEWE-LTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLEN 396
           WQ  R     L D  V++TG  SG G  L  QL   G+ ++ +    Q  ++++++  + 
Sbjct: 17  WQRERQVVSHLRDKYVFITGCDSGFGNLLARQLDLRGLRVLAACLTEQGAQQLRKQTSDR 76

Query: 397 GILKGKDILILPLDLANRSSHEVATKAVLQEFGKIDI--LVNNGGVSQRSLCVD--TSLD 564
                  +  + LD+    S   A + V +  G   +  LVNN G+S  S   +  T  D
Sbjct: 77  -------LETVLLDVTKTESVAAAKEWVKERVGDRGLWGLVNNAGISVISAPNEWLTKQD 129

Query: 565 VYKELMEVNYLGTVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGF 744
             K +++VN LG V +T  +LP ++ K +G+++ V+S MG ++    GGYC SK+ +  F
Sbjct: 130 FVK-ILDVNLLGMVDVTLQLLP-LVRKTRGRVVNVSSVMGRVSL-FGGGYCLSKYGVEAF 186

Query: 745 FNTLRTELATYPGITVSNVCPGPVKSNIVKNALTEEVTKTLGSDADQSHK 894
            ++LR EL +Y G+ V+ + PG  K+N+ K     +  KT  + A    K
Sbjct: 187 SDSLRREL-SYFGVKVAMIEPGFFKTNVTKPEAISQGYKTAWNQASPEIK 235


>ref|NP_999413.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Sus scrofa].
          Length = 292

 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 60/178 (33%), Positives = 90/178 (50%)
 Frame = +1

Query: 232 RPEWELTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKG 411
           RPE  L    V VTGAS GIG E+ Y L+++G  +V++AR  + L++V    LE G    
Sbjct: 28  RPEM-LRGKKVIVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHSLELGASSA 86

Query: 412 KDILILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVN 591
             +     D+            +L   G +D+L+ N         V   + + +  MEVN
Sbjct: 87  HYVAGTMEDMTFAEQFVAKAGKLL---GGLDMLILNHITQAFMTSVYDDIHLVRRSMEVN 143

Query: 592 YLGTVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTE 765
           +L  V L+   LP M+++  G I+ V+S  G +A PL   Y ASK AL GFF+++  E
Sbjct: 144 FLSYVVLSVAALP-MLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSITKE 200


>ref|NP_001182297.1| epidermal retinol dehydrogenase 2 [Sus scrofa].
          Length = 309

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 2/200 (1%)
 Frame = +1

Query: 235 PEWELTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGK 414
           P  ++   +V +TGA SG+G  L  + ++LG  LVL     +  E  ++   E G+    
Sbjct: 34  PRKKVAGEIVLITGAGSGLGRLLALKFARLGSVLVLWDINQERNEETRKMVQEAGVAGA- 92

Query: 415 DILILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNY 594
                  D + R         V +E G + IL+NN G+      +D   ++ ++ ++VN+
Sbjct: 93  --YAYTCDCSQREDVYRVASQVKKEVGDVSILINNAGIVTGRKFLDCPDELMEKSLDVNF 150

Query: 595 LGTVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTL--RTEL 768
              +   K  LP MI    G ++ ++S  G+I       YCASK A  GF  T+   T  
Sbjct: 151 KAHLWTYKAFLPAMIANDHGHLVCISSSAGLIGVYGLADYCASKFAAFGFAETVFFETFA 210

Query: 769 ATYPGITVSNVCPGPVKSNI 828
           +   GI  + VCP  +K+ +
Sbjct: 211 SKQKGIKTTIVCPFFIKTQM 230


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 25,376,379
Number of extensions: 665917
Number of successful extensions: 1780
Number of sequences better than 1.0e-05: 45
Number of HSP's gapped: 1728
Number of HSP's successfully gapped: 45
Length of query: 347
Length of database: 11,343,932
Length adjustment: 100
Effective length of query: 247
Effective length of database: 8,854,232
Effective search space: 2186995304
Effective search space used: 2186995304
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqMP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012716
         (1043 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_079798.2| dehydrogenase/reductase SDR family member 7 pre...   454   e-128
Alignment   gi|NP_001165583.1| dehydrogenase/reductase SDR family member 7B...   151   9e-37
Alignment   gi|NP_663403.1| dehydrogenase/reductase SDR family member 7B is...   151   9e-37
Alignment   gi|NP_001013031.2| dehydrogenase/reductase SDR family member 7C...   105   6e-23
Alignment   gi|NP_001038216.1| corticosteroid 11-beta-dehydrogenase isozyme...    99   4e-21
Alignment   gi|NP_032314.2| corticosteroid 11-beta-dehydrogenase isozyme 1 ...    99   4e-21
Alignment   gi|NP_001025461.1| retinol dehydrogenase 8 [Mus musculus].            98   9e-21
Alignment   gi|NP_444492.1| estradiol 17-beta-dehydrogenase 11 [Mus musculu...    95   8e-20
Alignment   gi|NP_001156958.1| 17-beta-hydroxysteroid dehydrogenase 13 isof...    91   1e-18
Alignment   gi|NP_932147.2| 17-beta-hydroxysteroid dehydrogenase 13 isoform...    91   1e-18

>ref|NP_079798.2| dehydrogenase/reductase SDR family member 7 precursor [Mus musculus].
          Length = 338

 Score =  454 bits (1167), Expect = e-128
 Identities = 225/312 (72%), Positives = 252/312 (80%)
 Frame = +1

Query: 106  MSWEXXXXXXXXXXXXXXXXXXXXXXXXDGDLTLLWAEWQGRRPEWELTDMVVWVTGASS 285
            MSWE                        D DLTLLWAEWQGRRPEWELTDMVVWVTGASS
Sbjct: 1    MSWELLLWLLALCALILPLVQLLRFLRADADLTLLWAEWQGRRPEWELTDMVVWVTGASS 60

Query: 286  GIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLDLANRSSHEV 465
            GIGEEL +QLSKLGVSLVLSARR QELERVKRRCLENG LK KDIL+LPLDL + SSHE 
Sbjct: 61   GIGEELAFQLSKLGVSLVLSARRAQELERVKRRCLENGNLKEKDILVLPLDLTDTSSHEA 120

Query: 466  ATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTKCVLPHMIEK 645
            ATKAVLQEFGKIDILVNNGG SQRSL ++T+LDV+KEL+ +NY+GTVSLTKCVLPHMIE+
Sbjct: 121  ATKAVLQEFGKIDILVNNGGRSQRSLVLETNLDVFKELINLNYIGTVSLTKCVLPHMIER 180

Query: 646  KQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGITVSNVCPGPVKSN 825
            KQGKI+TVNS  GI +  LS GYCASKHALRGFFN L +EL  YPGIT  NV PGPV+S+
Sbjct: 181  KQGKIVTVNSIAGIASVSLSSGYCASKHALRGFFNALHSELGQYPGITFCNVYPGPVQSD 240

Query: 826  IVKNALTEEVTKTLGSDADQSHKMATSRCARLMLIAMANDLKEVWIAEQPFLAMAYLWQY 1005
            IVKNA TEEVTK++ ++ DQS+KM TSRC RLMLI+MANDLKEVWI++ P L  AY+WQY
Sbjct: 241  IVKNAFTEEVTKSMRNNIDQSYKMPTSRCVRLMLISMANDLKEVWISDHPVLLGAYIWQY 300

Query: 1006 IPTWAWWLTSKI 1041
            +PTWA WL  K+
Sbjct: 301  MPTWAAWLNCKL 312


>ref|NP_001165583.1| dehydrogenase/reductase SDR family member 7B isoform 1 [Mus
           musculus].
          Length = 314

 Score =  151 bits (381), Expect = 9e-37
 Identities = 84/241 (34%), Positives = 135/241 (56%)
 Frame = +1

Query: 247 LTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILI 426
           L + VV VTGA+SG+G E        G  LVL  R V+ LE + R    +   +     +
Sbjct: 41  LRNAVVVVTGATSGLGRECAKVFHAAGAKLVLCGRNVKALEELSRELAGSSQGQTHQPFV 100

Query: 427 LPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTV 606
           +  DLA+  +   A   +LQ FG +D+L+NN G+S R    DT +DV +++ME+NY G V
Sbjct: 101 VTFDLADPGTIAAAAAEILQCFGYVDVLINNAGISYRGTISDTIVDVDRKVMEINYFGPV 160

Query: 607 SLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGI 786
           +LTK +LP M+E+KQG I+ ++S  G I+ P    Y ASKHA + FF+ LR E+     I
Sbjct: 161 ALTKALLPSMVERKQGHIVAISSIQGKISIPFRSAYSASKHATQAFFDCLRAEMEE-ANI 219

Query: 787 TVSNVCPGPVKSNIVKNALTEEVTKTLGSDADQSHKMATSRCARLMLIAMANDLKEVWIA 966
            V+ + PG + +N+  NA+T + ++    D + +   + +  A+ +  A+    K+V + 
Sbjct: 220 KVTVISPGYIHTNLSVNAVTADGSRYGALDKNTAQGRSAAEVAQDVFDAVGKKKKDVLLT 279

Query: 967 E 969
           +
Sbjct: 280 D 280


>ref|NP_663403.1| dehydrogenase/reductase SDR family member 7B isoform 2 [Mus
           musculus].
          Length = 323

 Score =  151 bits (381), Expect = 9e-37
 Identities = 84/241 (34%), Positives = 135/241 (56%)
 Frame = +1

Query: 247 LTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILI 426
           L + VV VTGA+SG+G E        G  LVL  R V+ LE + R    +   +     +
Sbjct: 50  LRNAVVVVTGATSGLGRECAKVFHAAGAKLVLCGRNVKALEELSRELAGSSQGQTHQPFV 109

Query: 427 LPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTV 606
           +  DLA+  +   A   +LQ FG +D+L+NN G+S R    DT +DV +++ME+NY G V
Sbjct: 110 VTFDLADPGTIAAAAAEILQCFGYVDVLINNAGISYRGTISDTIVDVDRKVMEINYFGPV 169

Query: 607 SLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGI 786
           +LTK +LP M+E+KQG I+ ++S  G I+ P    Y ASKHA + FF+ LR E+     I
Sbjct: 170 ALTKALLPSMVERKQGHIVAISSIQGKISIPFRSAYSASKHATQAFFDCLRAEMEE-ANI 228

Query: 787 TVSNVCPGPVKSNIVKNALTEEVTKTLGSDADQSHKMATSRCARLMLIAMANDLKEVWIA 966
            V+ + PG + +N+  NA+T + ++    D + +   + +  A+ +  A+    K+V + 
Sbjct: 229 KVTVISPGYIHTNLSVNAVTADGSRYGALDKNTAQGRSAAEVAQDVFDAVGKKKKDVLLT 288

Query: 967 E 969
           +
Sbjct: 289 D 289


>ref|NP_001013031.2| dehydrogenase/reductase SDR family member 7C precursor [Mus
           musculus].
          Length = 311

 Score =  105 bits (262), Expect = 6e-23
 Identities = 67/190 (35%), Positives = 103/190 (54%), Gaps = 2/190 (1%)
 Frame = +1

Query: 259 VVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDIL--ILP 432
           VV +T A SG+G+E        G  LVL  +  + LE +    L +     K     ++ 
Sbjct: 39  VVVITDAISGLGKECARVFHAGGARLVLCGKNWEGLESLYAT-LTSVADPSKTFTPKLVL 97

Query: 433 LDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSL 612
           LDL++ S  +   K VL  +G +DIL+NN  V  +      SL++ K++M+ NY G ++L
Sbjct: 98  LDLSDISCVQDVAKEVLDCYGCVDILINNASVKVKGPAHKISLELDKKIMDANYFGPITL 157

Query: 613 TKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGITV 792
           TK +LP+MI ++ G+I+ VN+       P    Y ASKHA+ GFF+ LR E+  Y  + V
Sbjct: 158 TKVLLPNMISRRTGQIVLVNNIQAKFGIPFRTAYAASKHAVMGFFDCLRAEVEEY-DVVV 216

Query: 793 SNVCPGPVKS 822
           S V P  ++S
Sbjct: 217 STVSPTFIRS 226


>ref|NP_001038216.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Mus musculus].
          Length = 292

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 68/180 (37%), Positives = 99/180 (55%), Gaps = 1/180 (0%)
 Frame = +1

Query: 232 RPEWELTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKG 411
           RPE  L    V VTGAS GIG E+ Y LSK+G  +VL+AR  + L++V  RCLE G    
Sbjct: 28  RPEM-LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASA 86

Query: 412 KDILILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCV-DTSLDVYKELMEV 588
             I     D+       V    ++   G +D+L+ N  ++Q SL +    +   + +MEV
Sbjct: 87  HYIAGTMEDMTFAEQFIVKAGKLM---GGLDMLILN-HITQTSLSLFHDDIHSVRRVMEV 142

Query: 589 NYLGTVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTEL 768
           N+L  V ++   LP M+++  G I  ++S  G +  P+   Y ASK AL GFF+T+RTEL
Sbjct: 143 NFLSYVVMSTAALP-MLKQSNGSIAVISSLAGKMTQPMIAPYSASKFALDGFFSTIRTEL 201


>ref|NP_032314.2| corticosteroid 11-beta-dehydrogenase isozyme 1 [Mus musculus].
          Length = 292

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 68/180 (37%), Positives = 99/180 (55%), Gaps = 1/180 (0%)
 Frame = +1

Query: 232 RPEWELTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKG 411
           RPE  L    V VTGAS GIG E+ Y LSK+G  +VL+AR  + L++V  RCLE G    
Sbjct: 28  RPEM-LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASA 86

Query: 412 KDILILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCV-DTSLDVYKELMEV 588
             I     D+       V    ++   G +D+L+ N  ++Q SL +    +   + +MEV
Sbjct: 87  HYIAGTMEDMTFAEQFIVKAGKLM---GGLDMLILN-HITQTSLSLFHDDIHSVRRVMEV 142

Query: 589 NYLGTVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTEL 768
           N+L  V ++   LP M+++  G I  ++S  G +  P+   Y ASK AL GFF+T+RTEL
Sbjct: 143 NFLSYVVMSTAALP-MLKQSNGSIAVISSLAGKMTQPMIAPYSASKFALDGFFSTIRTEL 201


>ref|NP_001025461.1| retinol dehydrogenase 8 [Mus musculus].
          Length = 317

 Score = 98.2 bits (243), Expect = 9e-21
 Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 3/210 (1%)
 Frame = +1

Query: 262 VWVTGASSGIGEELVYQLS---KLGVSLVLSARRVQELERVKRRCLENGILKGKDILILP 432
           V ++G SSGIG EL  QL+   +    +V + R + + E ++      G   GK + ++ 
Sbjct: 8   VLISGCSSGIGLELALQLAHDPRQRYQVVATMRDLGKKEPLEAAA---GEALGKTLSVVQ 64

Query: 433 LDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSL 612
           LD+ N  S       +  E G++D+LVNN GV         SL   + +   N+ G V L
Sbjct: 65  LDVCNDESVTDCLSHI--EGGQVDVLVNNAGVGLVGPLEGLSLATMQSVFNTNFFGAVRL 122

Query: 613 TKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGITV 792
            K VLP M  ++QG I+ V+S MG+     +  Y ASK AL GFF +L  +L  +  I +
Sbjct: 123 VKAVLPGMKRRRQGHIVVVSSVMGLQGVMFNDVYAASKFALEGFFESLAIQLRQF-NIFI 181

Query: 793 SNVCPGPVKSNIVKNALTEEVTKTLGSDAD 882
           S V PGPV ++  +  L  +V+K    D D
Sbjct: 182 SMVEPGPVTTDF-EGKLLAQVSKAEFPDTD 210


>ref|NP_444492.1| estradiol 17-beta-dehydrogenase 11 [Mus musculus].
          Length = 298

 Score = 95.1 bits (235), Expect = 8e-20
 Identities = 65/198 (32%), Positives = 89/198 (44%), Gaps = 2/198 (1%)
 Frame = +1

Query: 259 VVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLD 438
           +V +TGA  GIG    Y+ +KL   LVL       +E    +C + G      ++    D
Sbjct: 38  IVLITGAGHGIGRLTAYEFAKLNTKLVLWDINKNGIEETAAKCRKLGAQAHPFVV----D 93

Query: 439 LANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTK 618
            + R     A K V +E G + ILVNN GV   +    T     ++  EVN L     TK
Sbjct: 94  CSQREEIYSAAKKVKEEVGDVSILVNNAGVVYTADLFATQDPQIEKTFEVNVLAHFWTTK 153

Query: 619 CVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATY--PGITV 792
             LP M++   G I+TV S  G    P    YC+SK A  GF   L  ELA     G+  
Sbjct: 154 AFLPVMMKNNHGHIVTVASAAGHTVVPFLLAYCSSKFAAVGFHRALTDELAALGRTGVRT 213

Query: 793 SNVCPGPVKSNIVKNALT 846
           S +CP  + +  +KN  T
Sbjct: 214 SCLCPNFINTGFIKNPST 231


>ref|NP_001156958.1| 17-beta-hydroxysteroid dehydrogenase 13 isoform 1 [Mus musculus].
          Length = 300

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 10/217 (4%)
 Frame = +1

Query: 247 LTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILI 426
           +T   V +TGA  GIG    Y+ +K    LVL     + +E    +C + G +    + +
Sbjct: 34  VTGQTVLITGAGHGIGRLTAYEFAKQKSRLVLWDINKRGVEETADKCRKLGAV----VHV 89

Query: 427 LPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTV 606
             +D +NR+    +   V +E G ++I+VNN G    +  +    +   +  EVN LG  
Sbjct: 90  FVVDCSNRAEIYNSVDQVKREVGDVEIVVNNAGAIYPADLLSAKDEEITKTFEVNILGHF 149

Query: 607 SLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATY--P 780
            + K +LP M+ +  G I+TV S  G    P    YC+SK A  GF   L  EL T    
Sbjct: 150 WIIKALLPSMLRRNSGHIVTVASVCGHGVIPYLIPYCSSKFAAVGFHRALTAELDTLGKT 209

Query: 781 GITVSNVCPGPVKSNIVKNALT--------EEVTKTL 867
           GI  S +CP  V +   KN  T        EEV ++L
Sbjct: 210 GIQTSCLCPVFVNTGFTKNPSTRLWPVLEPEEVARSL 246


>ref|NP_932147.2| 17-beta-hydroxysteroid dehydrogenase 13 isoform 2 [Mus musculus].
          Length = 304

 Score = 90.9 bits (224), Expect = 1e-18
 Identities = 67/217 (30%), Positives = 100/217 (46%), Gaps = 10/217 (4%)
 Frame = +1

Query: 247 LTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILI 426
           +T   V +TGA  GIG    Y+ +K    LVL     + +E    +C + G +    + +
Sbjct: 34  VTGQTVLITGAGHGIGRLTAYEFAKQKSRLVLWDINKRGVEETADKCRKLGAV----VHV 89

Query: 427 LPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTV 606
             +D +NR+    +   V +E G ++I+VNN G    +  +    +   +  EVN LG  
Sbjct: 90  FVVDCSNRAEIYNSVDQVKREVGDVEIVVNNAGAIYPADLLSAKDEEITKTFEVNILGHF 149

Query: 607 SLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATY--P 780
            + K +LP M+ +  G I+TV S  G    P    YC+SK A  GF   L  EL T    
Sbjct: 150 WIIKALLPSMLRRNSGHIVTVASVCGHGVIPYLIPYCSSKFAAVGFHRALTAELDTLGKT 209

Query: 781 GITVSNVCPGPVKSNIVKNALT--------EEVTKTL 867
           GI  S +CP  V +   KN  T        EEV ++L
Sbjct: 210 GIQTSCLCPVFVNTGFTKNPSTRLWPVLEPEEVARSL 246


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 34,310,246
Number of extensions: 889940
Number of successful extensions: 2451
Number of sequences better than 1.0e-05: 54
Number of HSP's gapped: 2387
Number of HSP's successfully gapped: 54
Length of query: 347
Length of database: 15,617,559
Length adjustment: 102
Effective length of query: 245
Effective length of database: 12,553,887
Effective search space: 3075702315
Effective search space used: 3075702315
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)

Search to RefSeqHP_Rel49

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012716
         (1043 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_057113.1| dehydrogenase/reductase SDR family member 7 pre...   498   e-141
Alignment   gi|NP_056325.2| dehydrogenase/reductase SDR family member 7B [H...   145   8e-35
Alignment   gi|NP_001207422.1| dehydrogenase/reductase SDR family member 7C...   106   3e-23
Alignment   gi|NP_001099041.1| dehydrogenase/reductase SDR family member 7C...   106   4e-23
Alignment   gi|NP_057329.2| estradiol 17-beta-dehydrogenase 11 [Homo sapien...   100   2e-21
Alignment   gi|NP_001193670.1| corticosteroid 11-beta-dehydrogenase isozyme...    93   5e-19
Alignment   gi|NP_861420.1| corticosteroid 11-beta-dehydrogenase isozyme 1 ...    93   5e-19
Alignment   gi|NP_005516.1| corticosteroid 11-beta-dehydrogenase isozyme 1 ...    93   5e-19
Alignment   gi|NP_835236.2| 17-beta-hydroxysteroid dehydrogenase 13 isoform...    92   8e-19
Alignment   gi|NP_056540.1| retinol dehydrogenase 8 [Homo sapiens].               92   8e-19

>ref|NP_057113.1| dehydrogenase/reductase SDR family member 7 precursor [Homo sapiens].
          Length = 339

 Score =  498 bits (1281), Expect = e-141
 Identities = 237/284 (83%), Positives = 264/284 (92%)
 Frame = +1

Query: 190  DGDLTLLWAEWQGRRPEWELTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELE 369
            DGDLTLLWAEWQGRRPEWELTDMVVWVTGASSGIGEEL YQLSKLGVSLVLSARRV ELE
Sbjct: 29   DGDLTLLWAEWQGRRPEWELTDMVVWVTGASSGIGEELAYQLSKLGVSLVLSARRVHELE 88

Query: 370  RVKRRCLENGILKGKDILILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCV 549
            RVKRRCLENG LK KDIL+LPLDL +  SHE ATKAVLQEFG+IDILVNNGG+SQRSLC+
Sbjct: 89   RVKRRCLENGNLKEKDILVLPLDLTDTGSHEAATKAVLQEFGRIDILVNNGGMSQRSLCM 148

Query: 550  DTSLDVYKELMEVNYLGTVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKH 729
            DTSLDVY++L+E+NYLGTVSLTKCVLPHMIE+KQGKI+TVNS +GII+ PLS GYCASKH
Sbjct: 149  DTSLDVYRKLIELNYLGTVSLTKCVLPHMIERKQGKIVTVNSILGIISVPLSIGYCASKH 208

Query: 730  ALRGFFNTLRTELATYPGITVSNVCPGPVKSNIVKNALTEEVTKTLGSDADQSHKMATSR 909
            ALRGFFN LRTELATYPGI VSN+CPGPV+SNIV+N+L  EVTKT+G++ DQSHKM TSR
Sbjct: 209  ALRGFFNGLRTELATYPGIIVSNICPGPVQSNIVENSLAGEVTKTIGNNGDQSHKMTTSR 268

Query: 910  CARLMLIAMANDLKEVWIAEQPFLAMAYLWQYIPTWAWWLTSKI 1041
            C RLMLI+MANDLKEVWI+EQPFL + YLWQY+PTWAWW+T+K+
Sbjct: 269  CVRLMLISMANDLKEVWISEQPFLLVTYLWQYMPTWAWWITNKM 312


>ref|NP_056325.2| dehydrogenase/reductase SDR family member 7B [Homo sapiens].
          Length = 325

 Score =  145 bits (365), Expect = 8e-35
 Identities = 86/243 (35%), Positives = 135/243 (55%), Gaps = 2/243 (0%)
 Frame = +1

Query: 247 LTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDI-- 420
           L + VV +TGA+SG+G+E        G  LVL  R    LE + R    +   K +    
Sbjct: 50  LRNAVVVITGATSGLGKECAKVFYAAGAKLVLCGRNGGALEELIRELTASHATKVQTHKP 109

Query: 421 LILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLG 600
            ++  DL +  +   A   +LQ FG +DILVNN G+S R   +DT++DV K +ME NY G
Sbjct: 110 YLVTFDLTDSGAIVAAAAEILQCFGYVDILVNNAGISYRGTIMDTTVDVDKRVMETNYFG 169

Query: 601 TVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYP 780
            V+LTK +LP MI+++QG I+ ++S  G ++ P    Y ASKHA + FF+ LR E+  Y 
Sbjct: 170 PVALTKALLPSMIKRRQGHIVAISSIQGKMSIPFRSAYAASKHATQAFFDCLRAEMEQYE 229

Query: 781 GITVSNVCPGPVKSNIVKNALTEEVTKTLGSDADQSHKMATSRCARLMLIAMANDLKEVW 960
            I V+ + PG + +N+  NA+T + ++    D   +   +    A+ +L A+    K+V 
Sbjct: 230 -IEVTVISPGYIHTNLSVNAITADGSRYGVMDTTTAQGRSPVEVAQDVLAAVGKKKKDVI 288

Query: 961 IAE 969
           +A+
Sbjct: 289 LAD 291


>ref|NP_001207422.1| dehydrogenase/reductase SDR family member 7C isoform 1 [Homo
           sapiens].
          Length = 312

 Score =  106 bits (265), Expect = 3e-23
 Identities = 65/190 (34%), Positives = 101/190 (53%), Gaps = 2/190 (1%)
 Frame = +1

Query: 259 VVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDIL--ILP 432
           VV +T A SG+G+E        G  LVL  +  + LE +    +       +     ++ 
Sbjct: 39  VVVITDAISGLGKECARVFHTGGARLVLCGKNWERLENLYDALISVADPSKQTFTPKLVL 98

Query: 433 LDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSL 612
           LDL++ S      K VL  +G +DIL+NN  V  +      SL++ K++M+ NY G ++L
Sbjct: 99  LDLSDISCVPDVAKEVLDCYGCVDILINNASVKVKGPAHKISLELDKKIMDANYFGPITL 158

Query: 613 TKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGITV 792
           TK +LP+MI ++ G+I+ VN+  G    P    Y ASKHA  GFF+ LR E+  Y  + +
Sbjct: 159 TKALLPNMISRRTGQIVLVNNIQGKFGIPFRTTYAASKHAALGFFDCLRAEVEEY-DVVI 217

Query: 793 SNVCPGPVKS 822
           S V P  ++S
Sbjct: 218 STVSPTFIRS 227


>ref|NP_001099041.1| dehydrogenase/reductase SDR family member 7C isoform 2 [Homo
           sapiens].
          Length = 311

 Score =  106 bits (264), Expect = 4e-23
 Identities = 66/189 (34%), Positives = 101/189 (53%), Gaps = 1/189 (0%)
 Frame = +1

Query: 259 VVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGI-LKGKDILILPL 435
           VV +T A SG+G+E        G  LVL  +  + LE +    +      K     ++ L
Sbjct: 39  VVVITDAISGLGKECARVFHTGGARLVLCGKNWERLENLYDALISVADPSKTFTPKLVLL 98

Query: 436 DLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLT 615
           DL++ S      K VL  +G +DIL+NN  V  +      SL++ K++M+ NY G ++LT
Sbjct: 99  DLSDISCVPDVAKEVLDCYGCVDILINNASVKVKGPAHKISLELDKKIMDANYFGPITLT 158

Query: 616 KCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGITVS 795
           K +LP+MI ++ G+I+ VN+  G    P    Y ASKHA  GFF+ LR E+  Y  + +S
Sbjct: 159 KALLPNMISRRTGQIVLVNNIQGKFGIPFRTTYAASKHAALGFFDCLRAEVEEY-DVVIS 217

Query: 796 NVCPGPVKS 822
            V P  ++S
Sbjct: 218 TVSPTFIRS 226


>ref|NP_057329.2| estradiol 17-beta-dehydrogenase 11 [Homo sapiens].
          Length = 300

 Score =  100 bits (250), Expect = 2e-21
 Identities = 70/202 (34%), Positives = 94/202 (46%), Gaps = 2/202 (0%)
 Frame = +1

Query: 247 LTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILI 426
           +T  +V +TGA  GIG    Y+ +KL   LVL       LE    +C   G+  G  +  
Sbjct: 34  VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC--KGL--GAKVHT 89

Query: 427 LPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTV 606
             +D +NR     + K V  E G + ILVNN GV   S    T     ++  EVN L   
Sbjct: 90  FVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHF 149

Query: 607 SLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELAT--YP 780
             TK  LP M +   G I+TV S  G ++ P    YC+SK A  GF  TL  ELA     
Sbjct: 150 WTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQIT 209

Query: 781 GITVSNVCPGPVKSNIVKNALT 846
           G+  + +CP  V +  +KN  T
Sbjct: 210 GVKTTCLCPNFVNTGFIKNPST 231


>ref|NP_001193670.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Homo sapiens].
          Length = 292

 Score = 92.8 bits (229), Expect = 5e-19
 Identities = 65/178 (36%), Positives = 94/178 (52%)
 Frame = +1

Query: 232 RPEWELTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKG 411
           RPE  L    V VTGAS GIG E+ Y L+K+G  +V++AR  + L++V   CLE G    
Sbjct: 28  RPEM-LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 86

Query: 412 KDILILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVN 591
             I     D+   +   VA    L   G +D+L+ N   +         +   ++ MEVN
Sbjct: 87  HYIAGTMEDM-TFAEQFVAQAGKL--MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVN 143

Query: 592 YLGTVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTE 765
           +L  V LT   LP M+++  G I+ V+S  G +A P+   Y ASK AL GFF+++R E
Sbjct: 144 FLSYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 200


>ref|NP_861420.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Homo sapiens].
          Length = 292

 Score = 92.8 bits (229), Expect = 5e-19
 Identities = 65/178 (36%), Positives = 94/178 (52%)
 Frame = +1

Query: 232 RPEWELTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKG 411
           RPE  L    V VTGAS GIG E+ Y L+K+G  +V++AR  + L++V   CLE G    
Sbjct: 28  RPEM-LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 86

Query: 412 KDILILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVN 591
             I     D+   +   VA    L   G +D+L+ N   +         +   ++ MEVN
Sbjct: 87  HYIAGTMEDM-TFAEQFVAQAGKL--MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVN 143

Query: 592 YLGTVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTE 765
           +L  V LT   LP M+++  G I+ V+S  G +A P+   Y ASK AL GFF+++R E
Sbjct: 144 FLSYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 200


>ref|NP_005516.1| corticosteroid 11-beta-dehydrogenase isozyme 1 [Homo sapiens].
          Length = 292

 Score = 92.8 bits (229), Expect = 5e-19
 Identities = 65/178 (36%), Positives = 94/178 (52%)
 Frame = +1

Query: 232 RPEWELTDMVVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKG 411
           RPE  L    V VTGAS GIG E+ Y L+K+G  +V++AR  + L++V   CLE G    
Sbjct: 28  RPEM-LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASA 86

Query: 412 KDILILPLDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVN 591
             I     D+   +   VA    L   G +D+L+ N   +         +   ++ MEVN
Sbjct: 87  HYIAGTMEDM-TFAEQFVAQAGKL--MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVN 143

Query: 592 YLGTVSLTKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTE 765
           +L  V LT   LP M+++  G I+ V+S  G +A P+   Y ASK AL GFF+++R E
Sbjct: 144 FLSYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKE 200


>ref|NP_835236.2| 17-beta-hydroxysteroid dehydrogenase 13 isoform A [Homo sapiens].
          Length = 300

 Score = 92.0 bits (227), Expect = 8e-19
 Identities = 64/198 (32%), Positives = 93/198 (46%), Gaps = 2/198 (1%)
 Frame = +1

Query: 259 VVWVTGASSGIGEELVYQLSKLGVSLVLSARRVQELERVKRRCLENGILKGKDILILPLD 438
           +V +TGA  GIG +  Y+ +K    LVL     + +E     C + G+     ++    D
Sbjct: 38  IVLITGAGHGIGRQTTYEFAKRQSILVLWDINKRGVEETAAECRKLGVTAHAYVV----D 93

Query: 439 LANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSLTK 618
            +NR     +   V +E G + I+VNN G    +  + T  +   +  EVN LG   +TK
Sbjct: 94  CSNREEIYRSLNQVKKEVGDVTIVVNNAGTVYPADLLSTKDEEITKTFEVNILGHFWITK 153

Query: 619 CVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATY--PGITV 792
            +LP M+E+  G I+TV S  G    P    YC+SK A  GF   L +EL      GI  
Sbjct: 154 ALLPSMMERNHGHIVTVASVCGHEGIPYLIPYCSSKFAAVGFHRGLTSELQALGKTGIKT 213

Query: 793 SNVCPGPVKSNIVKNALT 846
           S +CP  V +   KN  T
Sbjct: 214 SCLCPVFVNTGFTKNPST 231


>ref|NP_056540.1| retinol dehydrogenase 8 [Homo sapiens].
          Length = 311

 Score = 92.0 bits (227), Expect = 8e-19
 Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 4/214 (1%)
 Frame = +1

Query: 262 VWVTGASSGIGEELVYQLS---KLGVSLVLSARRVQELERVKRRCLENGILKGKDILILP 432
           V ++G SSGIG EL  QL+   K    +V + R + + E ++      G   G+ + +  
Sbjct: 8   VLISGCSSGIGLELAVQLAHDPKKRYQVVATMRDLGKKETLEAAA---GEALGQTLTVAQ 64

Query: 433 LDLANRSSHEVATKAVLQEFGKIDILVNNGGVSQRSLCVDTSLDVYKELMEVNYLGTVSL 612
           LD+ +  S       +    G++D+LVNN G+         SL   + + + N+ G V L
Sbjct: 65  LDVCSDESVAQCLSCIQ---GEVDVLVNNAGMGLVGPLEGLSLAAMQNVFDTNFFGAVRL 121

Query: 613 TKCVLPHMIEKKQGKIITVNSFMGIIAAPLSGGYCASKHALRGFFNTLRTELATYPGITV 792
            K VLP M  ++QG I+ ++S MG+     +  Y ASK AL GFF +L  +L  +  I +
Sbjct: 122 VKAVLPGMKRRRQGHIVVISSVMGLQGVIFNDVYAASKFALEGFFESLAIQLLQF-NIFI 180

Query: 793 SNVCPGPVKSNIVKNALTE-EVTKTLGSDADQSH 891
           S V PGPV +      L +  + +  G+D +  H
Sbjct: 181 SLVEPGPVVTEFEGKLLAQVSMAEFPGTDPETLH 214


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 40,390,516
Number of extensions: 1054823
Number of successful extensions: 2721
Number of sequences better than 1.0e-05: 59
Number of HSP's gapped: 2650
Number of HSP's successfully gapped: 59
Length of query: 347
Length of database: 18,297,164
Length adjustment: 103
Effective length of query: 244
Effective length of database: 14,901,872
Effective search space: 3636056768
Effective search space used: 3636056768
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

Search to Sscrofa10_2

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-012716
         (1043 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr01                                                         478   e-132

>Sscrofa_Chr01 
||          Length = 315321322

 Score =  478 bits (241), Expect = e-132
 Identities = 241/241 (100%)
 Strand = Plus / Minus

                                                                             
Query: 499       atcgacattctggtcaacaatggtggagtatcccagcgttctttgtgtgtggacaccagc 558
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210282446 atcgacattctggtcaacaatggtggagtatcccagcgttctttgtgtgtggacaccagc 210282387

                                                                             
Query: 559       ctggatgtctacaaggagctaatggaagttaactacttagggacggtgtccttgacaaag 618
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210282386 ctggatgtctacaaggagctaatggaagttaactacttagggacggtgtccttgacaaag 210282327

                                                                             
Query: 619       tgtgttctgcctcacatgattgagaagaagcaaggaaaaatcattactgtgaatagcttc 678
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210282326 tgtgttctgcctcacatgattgagaagaagcaaggaaaaatcattactgtgaatagcttc 210282267

                                                                             
Query: 679       atgggtattatagctgcacccctttctggtggatattgtgccagcaaacatgctcttcgg 738
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210282266 atgggtattatagctgcacccctttctggtggatattgtgccagcaaacatgctcttcgg 210282207

                  
Query: 739       g 739
                 |
Sbjct: 210282206 g 210282206



 Score =  464 bits (234), Expect = e-128
 Identities = 234/234 (100%)
 Strand = Plus / Minus

                                                                             
Query: 5         actcgcgcagttgcgcggctcagaccaggtccggagggttcgtgggtcgctctagctatc 64
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210292963 actcgcgcagttgcgcggctcagaccaggtccggagggttcgtgggtcgctctagctatc 210292904

                                                                             
Query: 65        tctattagctgtctccgcaaagcagggcgtgcgcggcggtgatgagctgggagctgtttc 124
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210292903 tctattagctgtctccgcaaagcagggcgtgcgcggcggtgatgagctgggagctgtttc 210292844

                                                                             
Query: 125       tctggctgctggcactatgcgtgctgctcgcgctcgtggtgcagctcctgcgcttcctgc 184
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210292843 tctggctgctggcactatgcgtgctgctcgcgctcgtggtgcagctcctgcgcttcctgc 210292784

                                                                       
Query: 185       gggcagatggcgacctgaccctgctgtgggccgagtggcaggggcgacgcccag 238
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210292783 gggcagatggcgacctgaccctgctgtgggccgagtggcaggggcgacgcccag 210292730



 Score =  357 bits (180), Expect = 8e-96
 Identities = 183/184 (99%)
 Strand = Plus / Minus

                                                                             
Query: 860       agactctaggcagtgatgcagaccaatcccacaagatggcaaccagccgctgtgcacggc 919
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210278824 agactctaggcagtgatgcagaccaatcccacaagatggcaaccagccgctgtgcacggc 210278765

                                                                             
Query: 920       tgatgttaattgccatggccaatgatttgaaagaagtttggattgcggagcagccttttt 979
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210278764 tgatgttaattgccatggccaatgatttgaaagaagtttggattgcggagcagccttttt 210278705

                                                                             
Query: 980       tggcaatggcatatttatggcaatatataccaacctgggcctggtggctgaccagcaaaa 1039
                 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210278704 tgtcaatggcatatttatggcaatatataccaacctgggcctggtggctgaccagcaaaa 210278645

                     
Query: 1040      tagg 1043
                 ||||
Sbjct: 210278644 tagg 210278641



 Score =  307 bits (155), Expect = 7e-81
 Identities = 155/155 (100%)
 Strand = Plus / Minus

                                                                             
Query: 237       agaatgggagctaactgatatggtggtgtgggtgactggagcatccagtgggattggcga 296
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210286191 agaatgggagctaactgatatggtggtgtgggtgactggagcatccagtgggattggcga 210286132

                                                                             
Query: 297       ggagctggtttaccagctctctaaactaggagtttctctcgtgctgtcagccagaagagt 356
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210286131 ggagctggtttaccagctctctaaactaggagtttctctcgtgctgtcagccagaagagt 210286072

                                                    
Query: 357       gcaggagctggaaagggtgaaaagaagatgccttg 391
                 |||||||||||||||||||||||||||||||||||
Sbjct: 210286071 gcaggagctggaaagggtgaaaagaagatgccttg 210286037



 Score =  226 bits (114), Expect = 2e-56
 Identities = 114/114 (100%)
 Strand = Plus / Minus

                                                                             
Query: 748       aataccctccgaactgaacttgccacatacccaggtataacagtttctaatgtttgccca 807
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210280155 aataccctccgaactgaacttgccacatacccaggtataacagtttctaatgtttgccca 210280096

                                                                       
Query: 808       ggacctgtaaaatcaaatattgtgaagaatgccctaactgaagaagtcacaaag 861
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210280095 ggacctgtaaaatcaaatattgtgaagaatgccctaactgaagaagtcacaaag 210280042



 Score =  214 bits (108), Expect = 7e-53
 Identities = 108/108 (100%)
 Strand = Plus / Minus

                                                                             
Query: 391       gagaatggcattttgaaaggaaaagatatactaattttgccccttgacctggctaataga 450
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210283448 gagaatggcattttgaaaggaaaagatatactaattttgccccttgacctggctaataga 210283389

                                                                 
Query: 451       agttcgcatgaagtggctactaaagctgttctccaggagtttggtaaa 498
                 ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210283388 agttcgcatgaagtggctactaaagctgttctccaggagtttggtaaa 210283341


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 29,999,339
Number of extensions: 156
Number of successful extensions: 156
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 156
Number of HSP's successfully gapped: 6
Length of query: 1043
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 1022
Effective length of database: 2,808,413,156
Effective search space: 2870198245432
Effective search space used: 2870198245432
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)