Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012726
(2130 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001039781.1| galectin-3-binding protein precursor [Bos ta... 827 0.0
Alignment gi|NP_001180151.1| neurotrypsin [Bos taurus]. 130 4e-30
Alignment gi|XP_002688105.1| PREDICTED: protease, serine, 12 (neurotrypsi... 130 4e-30
Alignment gi|XP_597136.5| PREDICTED: CD163 molecule-like 1-like [Bos taur... 130 5e-30
Alignment gi|XP_002684588.1| PREDICTED: CD163 molecule-like 1-like [Bos t... 130 5e-30
Alignment gi|NP_001156885.1| scavenger receptor cysteine-rich type 1 prot... 122 1e-27
Alignment gi|NP_001179121.1| scavenger receptor cysteine-rich domain-cont... 121 3e-27
Alignment gi|XP_002698598.1| PREDICTED: deleted in malignant brain tumors... 121 3e-27
Alignment gi|XP_002698159.1| PREDICTED: scavenger receptor cysteine rich ... 121 3e-27
Alignment gi|NP_001177353.1| hypothetical protein LOC514534 [Bos taurus]. 120 4e-27
>ref|NP_001039781.1| galectin-3-binding protein precursor [Bos taurus].
Length = 555
Score = 827 bits (2135), Expect = 0.0
Identities = 402/555 (72%), Positives = 459/555 (82%), Gaps = 3/555 (0%)
Frame = +2
Query: 158 MAPXXXXXXXXXVTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASV 337
MAP V GT+GVKDGDMRLA G + N+GRVEI+Y+GQWGTVC+++WDLTDASV
Sbjct: 1 MAPLRLFWIWLLVVGTRGVKDGDMRLADGGSANQGRVEIYYNGQWGTVCENMWDLTDASV 60
Query: 338 VCRALGFRNVTKALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDAS 517
VCRALGF+N T+ALGGAAFGPG GPIMLDEV C GTE SLA+C SLGWM+S+C H++DAS
Sbjct: 61 VCRALGFQNATEALGGAAFGPGYGPIMLDEVRCTGTEPSLANCSSLGWMRSNCRHDKDAS 120
Query: 518 VICTKETRGVHTLDLSGELPEALERIFESQTGCDLFIRVKAKE-DELGLCAHKLILSANP 694
VICT ETRGV+TLDLSGELP ALE+IFESQ GCDLFI VK +E DE+ +CAHKLILS NP
Sbjct: 121 VICTNETRGVYTLDLSGELPAALEQIFESQKGCDLFITVKVREEDEIAMCAHKLILSTNP 180
Query: 695 EAHGLWKEPSSRVTMEVDAECVPVVRDYIRYLYSRRVDVSLASVQCFHQLASAYGAQQLQ 874
EAHGLWKEP SRVTMEVDAECVPVV+D+IRYLYSRR+DVSL+SV+C H+ ASAY A+QLQ
Sbjct: 181 EAHGLWKEPGSRVTMEVDAECVPVVKDFIRYLYSRRIDVSLSSVKCLHKFASAYQAKQLQ 240
Query: 875 SFCAHLFAVLIPQDRSFRAPLDLYAYALASRDPVLEEVCVQFLTWNFEALTQAEAWPSVP 1054
S+C HLFA+LIPQD SF PL+LYAYALA+RD VLEE+CVQFL WNF ALTQAEAWPSVP
Sbjct: 241 SYCGHLFAILIPQDPSFWTPLELYAYALATRDTVLEEICVQFLAWNFGALTQAEAWPSVP 300
Query: 1055 AALLHSLLARXXXXXXXXXXXXXXXDVWSRERGASHGEVEGLVEKVRFPMMPPRDLFQLQ 1234
ALL LL+R D WS+ER SH EVE LV +VRFPMMPP+DLF LQ
Sbjct: 301 PALLQGLLSRTELVVPSELVLLLAVDKWSQERHTSHKEVEALVGQVRFPMMPPQDLFSLQ 360
Query: 1235 FNLSLYRSHEALFQRKTLQALEFHTVPFQLLAQYRGLNLSGDAYRPRLYTSPRWSANQTA 1414
FNLSLY SHEALFQ+K LQALEFHTVPF+LLAQY GLNL+ Y+PRLYTSP WS + +
Sbjct: 361 FNLSLYWSHEALFQKKILQALEFHTVPFELLAQYWGLNLTEGTYQPRLYTSPTWSQSVMS 420
Query: 1415 SAYSPYESFQTPKHPSFLFQDSSVSWSFVYLPTVQSCWNYGFSCSPDEPPLLGLSKT--S 1588
S+Y+P SFQTP+HPSFLF DSSVSWSFVYLPT+QSCWNYGFSCS D+PPLL LSK+ S
Sbjct: 421 SSYNPSRSFQTPQHPSFLFHDSSVSWSFVYLPTLQSCWNYGFSCSSDDPPLLALSKSSYS 480
Query: 1589 SLDPTIGYENKALMLCEGSFVADIAAFKDTKALIPSALGTNSSRSAAFFPCPAGFFSSFQ 1768
+PTIGYEN+AL+ CEGSFV D+ FK KAL+PSAL TNSSRS + FPCP+G FS FQ
Sbjct: 481 KSNPTIGYENRALLHCEGSFVVDVIDFKGWKALVPSALATNSSRSTSLFPCPSGVFSRFQ 540
Query: 1769 AVIRPFYLTNSSGVD 1813
VIRPFYLTNS+ +D
Sbjct: 541 VVIRPFYLTNSTDMD 555
>ref|NP_001180151.1| neurotrypsin [Bos taurus].
Length = 871
Score = 130 bits (328), Expect = 4e-30
Identities = 59/107 (55%), Positives = 70/107 (65%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GG + EGRVE++++GQWGTVCD WD DA VVCR LG + KA A FG GS
Sbjct: 276 LRLVGGSSVREGRVEVYHAGQWGTVCDDQWDDADAEVVCRQLGLSGIAKAWNQAYFGEGS 335
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGV 547
GP+MLDEV C G ELS+ C W + +C H EDA V CT T GV
Sbjct: 336 GPVMLDEVRCTGNELSIEQCPKSSWGEHNCDHKEDAGVSCTPLTDGV 382
Score = 110 bits (275), Expect = 5e-24
Identities = 52/100 (52%), Positives = 64/100 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GE EGRVE+F +GQWGTVCD W DA+V+CR LG++ +A A FG G
Sbjct: 496 IRLMDGENKKEGRVEVFINGQWGTVCDDGWTDKDATVICRQLGYKGPARARSMAYFGEGE 555
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GPI +D V+C G E SLADC +C H+EDA VIC
Sbjct: 556 GPIHMDNVKCTGNERSLADCVRQNIGDHNCRHSEDAGVIC 595
Score = 97.8 bits (242), Expect = 3e-20
Identities = 46/103 (44%), Positives = 57/103 (55%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
DG +RLAGG+ +EGR+E+++ GQWGTVC+ W + VVCR LGF+ K F
Sbjct: 380 DGVIRLAGGKGSHEGRLEVYHRGQWGTVCNDGWTDLNTYVVCRQLGFK-YGKQASANHFE 438
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GPI LD V C G E S C W DC H ED + C
Sbjct: 439 ESMGPIWLDGVSCSGKEASFLQCSQRPWGSHDCSHREDVGISC 481
Score = 68.6 bits (166), Expect = 2e-11
Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Frame = +2
Query: 221 GDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCR--ALGFRNVTKALGGAAF 394
G ++L GG++ EG VE++ +G WG VC S WD DASVVC LG + V K +
Sbjct: 164 GSVQLRGGKSAFEGTVEVYENGVWGVVCSSHWDDADASVVCHQLQLGGKGVAKQTPFSEL 223
Query: 395 GPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G P+ V C G E ++ C W C A+V+C+
Sbjct: 224 --GLIPVYWSNVRCRGDEENILLCEKDIWQGGACSEKMAAAVLCS 266
>ref|XP_002688105.1| PREDICTED: protease, serine, 12 (neurotrypsin, motopsin) [Bos
taurus].
Length = 871
Score = 130 bits (328), Expect = 4e-30
Identities = 59/107 (55%), Positives = 70/107 (65%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GG + EGRVE++++GQWGTVCD WD DA VVCR LG + KA A FG GS
Sbjct: 276 LRLVGGSSVREGRVEVYHAGQWGTVCDDQWDDADAEVVCRQLGLSGIAKAWNQAYFGEGS 335
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGV 547
GP+MLDEV C G ELS+ C W + +C H EDA V CT T GV
Sbjct: 336 GPVMLDEVRCTGNELSIEQCPKSSWGEHNCDHKEDAGVSCTPLTDGV 382
Score = 110 bits (275), Expect = 5e-24
Identities = 52/100 (52%), Positives = 64/100 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GE EGRVE+F +GQWGTVCD W DA+V+CR LG++ +A A FG G
Sbjct: 496 IRLMDGENKKEGRVEVFINGQWGTVCDDGWTDKDATVICRQLGYKGPARARSMAYFGEGE 555
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GPI +D V+C G E SLADC +C H+EDA VIC
Sbjct: 556 GPIHMDNVKCTGNERSLADCVRQNIGDHNCRHSEDAGVIC 595
Score = 97.8 bits (242), Expect = 3e-20
Identities = 46/103 (44%), Positives = 57/103 (55%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
DG +RLAGG+ +EGR+E+++ GQWGTVC+ W + VVCR LGF+ K F
Sbjct: 380 DGVIRLAGGKGSHEGRLEVYHRGQWGTVCNDGWTDLNTYVVCRQLGFK-YGKQASANHFE 438
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GPI LD V C G E S C W DC H ED + C
Sbjct: 439 ESMGPIWLDGVSCSGKEASFLQCSQRPWGSHDCSHREDVGISC 481
Score = 68.6 bits (166), Expect = 2e-11
Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Frame = +2
Query: 221 GDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCR--ALGFRNVTKALGGAAF 394
G ++L GG++ EG VE++ +G WG VC S WD DASVVC LG + V K +
Sbjct: 164 GSVQLRGGKSAFEGTVEVYENGVWGVVCSSHWDDADASVVCHQLQLGGKGVAKQTPFSEL 223
Query: 395 GPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G P+ V C G E ++ C W C A+V+C+
Sbjct: 224 --GLIPVYWSNVRCRGDEENILLCEKDIWQGGACSEKMAAAVLCS 266
>ref|XP_597136.5| PREDICTED: CD163 molecule-like 1-like [Bos taurus].
Length = 1102
Score = 130 bits (327), Expect = 5e-30
Identities = 58/104 (55%), Positives = 72/104 (69%)
Frame = +2
Query: 215 KDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAF 394
++G++R+ GGE GRVE++++G WGTVCD WDL DA VVCR LG A+ GAAF
Sbjct: 869 EEGELRVRGGEDRCSGRVELWHAGSWGTVCDDSWDLADAEVVCRQLGCGRAVDAVAGAAF 928
Query: 395 GPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GPGSGP+ LDEV C G+E SL C + W + DCGH EDA V C
Sbjct: 929 GPGSGPVWLDEVGCRGSEASLWGCPAQPWGRGDCGHKEDAGVRC 972
Score = 115 bits (287), Expect = 2e-25
Identities = 53/102 (51%), Positives = 67/102 (65%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RLA G GRVE+ ++G+WGTVCD WDL DA VVCR LG + A G A FG G+
Sbjct: 640 VRLAAGPGRCAGRVELLHAGEWGTVCDDGWDLRDAQVVCRQLGCGHALGAPGAAHFGAGA 699
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK 532
G I +DE+ CEG E +L C S GW + DCGH EDA +C++
Sbjct: 700 GRIWMDELACEGHEAALWRCPSRGWGRHDCGHKEDAGALCSE 741
Score = 76.3 bits (186), Expect = 1e-13
Identities = 46/137 (33%), Positives = 64/137 (46%)
Frame = +2
Query: 209 GVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGA 388
G++ + RL G + EGRVE+ G W +C + WDL DA+V+C L N G
Sbjct: 423 GLRCSEFRLVNGSSACEGRVELQVQGAWAPLCAAHWDLADATVLCHQLDCGNAVATPPGG 482
Query: 389 AFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDLSG 568
FG G+ DEV C GTE L C CG + A+ +C+
Sbjct: 483 HFGGGASAPWPDEVHCVGTEPYLWSCAVSTLGAPACGPGDAAAAVCS------------- 529
Query: 569 ELPEALERIFESQTGCD 619
LP+AL R+ + Q+ CD
Sbjct: 530 GLPDAL-RLRDGQSRCD 545
Score = 75.9 bits (185), Expect = 1e-13
Identities = 40/101 (39%), Positives = 52/101 (51%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G++ +GRVE+ G WG V D WDL A+VVCR LG +A AA G+
Sbjct: 535 LRLRDGQSRCDGRVEVSLDGVWGRVLDEAWDLRGAAVVCRQLGCGAAERAYEAAAPARGA 594
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
P+ L V C GTE L C G + DA V+C+
Sbjct: 595 VPLGLSRVRCAGTEPRLTRCNVSAAALVSAGASRDAGVVCS 635
Score = 68.9 bits (167), Expect = 2e-11
Identities = 41/104 (39%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
+ RL GGE GR+E+ WGTVCD+ DL A VVCR L GA FG G
Sbjct: 328 EARLVGGEHSCAGRLEVRRGLTWGTVCDADLDLATAHVVCRELQCGAAVSTPQGAHFGQG 387
Query: 404 SGPIMLDEVECEGTELSLADC-RSLGWMQSDCGHNEDASVICTK 532
G + + C G E L C R G CGH +DA + C++
Sbjct: 388 PGLVWAEAFRCAGNESLLFHCPREPG---HRCGHGQDAGLRCSE 428
>ref|XP_002684588.1| PREDICTED: CD163 molecule-like 1-like [Bos taurus].
Length = 1198
Score = 130 bits (327), Expect = 5e-30
Identities = 58/104 (55%), Positives = 72/104 (69%)
Frame = +2
Query: 215 KDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAF 394
++G++R+ GGE GRVE++++G WGTVCD WDL DA VVCR LG A+ GAAF
Sbjct: 1050 EEGELRVRGGEDRCSGRVELWHAGSWGTVCDDSWDLADAEVVCRQLGCGRAVDAVAGAAF 1109
Query: 395 GPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GPGSGP+ LDEV C G+E SL C + W + DCGH EDA V C
Sbjct: 1110 GPGSGPVWLDEVGCRGSEASLWGCPAQPWGRGDCGHKEDAGVRC 1153
Score = 115 bits (287), Expect = 2e-25
Identities = 53/102 (51%), Positives = 67/102 (65%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RLA G GRVE+ ++G+WGTVCD WDL DA VVCR LG + A G A FG G+
Sbjct: 821 VRLAAGPGRCAGRVELLHAGEWGTVCDDGWDLRDAQVVCRQLGCGHALGAPGAAHFGAGA 880
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK 532
G I +DE+ CEG E +L C S GW + DCGH EDA +C++
Sbjct: 881 GRIWMDELACEGHEAALWRCPSRGWGRHDCGHKEDAGALCSE 922
Score = 76.3 bits (186), Expect = 1e-13
Identities = 46/137 (33%), Positives = 64/137 (46%)
Frame = +2
Query: 209 GVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGA 388
G++ + RL G + EGRVE+ G W +C + WDL DA+V+C L N G
Sbjct: 604 GLRCSEFRLVNGSSACEGRVELQVQGAWAPLCAAHWDLADATVLCHQLDCGNAVATPPGG 663
Query: 389 AFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDLSG 568
FG G+ DEV C GTE L C CG + A+ +C+
Sbjct: 664 HFGGGASAPWPDEVHCVGTEPYLWSCAVSTLGAPACGPGDAAAAVCS------------- 710
Query: 569 ELPEALERIFESQTGCD 619
LP+AL R+ + Q+ CD
Sbjct: 711 GLPDAL-RLRDGQSRCD 726
Score = 75.9 bits (185), Expect = 1e-13
Identities = 40/101 (39%), Positives = 52/101 (51%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G++ +GRVE+ G WG V D WDL A+VVCR LG +A AA G+
Sbjct: 716 LRLRDGQSRCDGRVEVSLDGVWGRVLDEAWDLRGAAVVCRQLGCGAAERAYEAAAPARGA 775
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
P+ L V C GTE L C G + DA V+C+
Sbjct: 776 VPLGLSRVRCAGTEPRLTRCNVSAAALVSAGASRDAGVVCS 816
Score = 68.9 bits (167), Expect = 2e-11
Identities = 41/104 (39%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
+ RL GGE GR+E+ WGTVCD+ DL A VVCR L GA FG G
Sbjct: 509 EARLVGGEHSCAGRLEVRRGLTWGTVCDADLDLATAHVVCRELQCGAAVSTPQGAHFGQG 568
Query: 404 SGPIMLDEVECEGTELSLADC-RSLGWMQSDCGHNEDASVICTK 532
G + + C G E L C R G CGH +DA + C++
Sbjct: 569 PGLVWAEAFRCAGNESLLFHCPREPG---HRCGHGQDAGLRCSE 609
>ref|NP_001156885.1| scavenger receptor cysteine-rich type 1 protein M130 [Bos taurus].
Length = 1129
Score = 122 bits (306), Expect = 1e-27
Identities = 55/111 (49%), Positives = 68/111 (61%)
Frame = +2
Query: 200 GTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKAL 379
G + G +RL G GR+E+++ G WGT+CD WDL DA VVCR LG A
Sbjct: 704 GVPCIGSGQLRLVNGGGRCAGRIEVYHEGSWGTICDDSWDLDDAHVVCRQLGCGVAINAT 763
Query: 380 GGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK 532
G A FG GSGPI LDEV C G E ++ CRS GW + +C H EDA VIC++
Sbjct: 764 GSAHFGEGSGPIWLDEVNCNGKEPRISQCRSHGWGRQNCRHKEDAGVICSE 814
Score = 117 bits (294), Expect = 3e-26
Identities = 57/108 (52%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G + GRVE+++ G WGTVCD WDL D VVCR LG +A AAFG G+
Sbjct: 923 IRLQEGTTNCSGRVEVWHGGSWGTVCDDSWDLNDTQVVCRQLGCGLALEAGKEAAFGQGT 982
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK--ETRG 544
GPI L+EV+C+G E SL DC + W SDCGH EDASV C++ E++G
Sbjct: 983 GPIWLNEVKCKGNESSLWDCPARSWGHSDCGHKEDASVKCSEIAESKG 1030
Score = 106 bits (264), Expect = 9e-23
Identities = 54/111 (48%), Positives = 68/111 (61%)
Frame = +2
Query: 194 VTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
VT + G D +MRL G GR+EI + GQWGTVCD ++L ASVVC+ LG +
Sbjct: 143 VTCSDG-SDLEMRLMNGGNRCSGRIEIKFQGQWGTVCDDNFNLDHASVVCKQLGCGSAVS 201
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
G A FG GSGPI D++ C G E +L +CR GW + +C H EDA VIC
Sbjct: 202 FSGSANFGEGSGPIWFDDLVCHGNESALWNCRHEGWGKHNCDHAEDAGVIC 252
Score = 100 bits (250), Expect = 4e-21
Identities = 47/112 (41%), Positives = 64/112 (57%)
Frame = +2
Query: 194 VTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
VT G D ++RL G+ GRVE+ +WGTVC++ WDL SVVC+ LG +V K
Sbjct: 35 VTSALGGTDKELRLVAGQTKCSGRVEVKVQEEWGTVCNTGWDLAAVSVVCKQLGCPSVIK 94
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
A G G+G I +D V C G E +L DC+ GW + +C H +D V C+
Sbjct: 95 ATGWTNSSAGTGRIWMDHVSCRGNESALWDCKHEGWGKHNCTHQQDVGVTCS 146
Score = 94.0 bits (232), Expect = 5e-19
Identities = 44/104 (42%), Positives = 58/104 (55%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
D +RL G GR+E+ + G+WGTVCD WD DA+V C+ LG A+G
Sbjct: 257 DLSLRLVDGVTKCSGRLEVRFQGEWGTVCDDGWDSDDAAVACQQLGCPTAITAVGRVNAS 316
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G+G I LD V C+G E ++ CR W + C HNEDA V C+
Sbjct: 317 EGTGHIWLDSVSCQGHESAVWQCRHHEWGKHYCNHNEDAGVTCS 360
Score = 93.2 bits (230), Expect = 8e-19
Identities = 44/103 (42%), Positives = 61/103 (59%)
Frame = +2
Query: 230 RLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSG 409
RL GG+ GRVE+ + WGT+CDS + L ASV+CR L +V LGGA FG G+G
Sbjct: 473 RLVGGDIPCSGRVEVKHGDTWGTICDSDFSLESASVLCRELECGSVVSILGGAHFGEGNG 532
Query: 410 PIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKET 538
I +E +CEG E L+ C + C H++D V+C++ T
Sbjct: 533 QIWAEEFQCEGNESHLSLCPVAPRLDGTCSHSKDIGVVCSRYT 575
Score = 79.0 bits (193), Expect = 2e-14
Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
++RL GG EGRVE+ G WG +C+S WD+ DA V+C+ L G A FG G
Sbjct: 576 EVRLVGGNTPCEGRVEVKILGTWGPLCNSHWDMEDAHVLCQQLKCGVAASIPGRAPFGKG 635
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT-KETRGVHTLDLSGELPE 580
SG C GTE + DC S C + ASVIC+ ++ ++ + S PE
Sbjct: 636 SGQPWRHMFHCTGTEQHMGDCPVTALGASLCPEGQVASVICSGNRSQTLYPCNSSSSDPE 695
Query: 581 ALERIFESQTGC 616
+ + E+ C
Sbjct: 696 SSVVLEENGVPC 707
Score = 57.0 bits (136), Expect = 7e-08
Identities = 36/112 (32%), Positives = 51/112 (45%)
Frame = +2
Query: 194 VTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
VT + G D ++RL GG + G VE+ G VCD W L +A VVC+ LG + +
Sbjct: 357 VTCSDG-SDLELRLKGGGSRCAGTVEVEIQKLIGKVCDRSWGLKEADVVCKQLGCGSALR 415
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
+ L C G E S+ DC++ W C H +A V C+
Sbjct: 416 TSYQVYSKIQATNTWLFLNNCNGNETSIWDCKNWQWGGLSCEHYHEAKVTCS 467
>ref|NP_001179121.1| scavenger receptor cysteine-rich domain-containing group B protein
[Bos taurus].
Length = 583
Score = 121 bits (303), Expect = 3e-27
Identities = 56/107 (52%), Positives = 65/107 (60%)
Frame = +2
Query: 209 GVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGA 388
G K G +RL GG GRVE+ Y+G WGTVCD WD DA V CR G A G
Sbjct: 349 GKKSGRLRLVGGPGPCRGRVEVLYAGGWGTVCDDDWDFADARVACREAGCGPALGATGLG 408
Query: 389 AFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
FG G GP++LD V C GTE L+DC LGW Q +CGH+EDA IC+
Sbjct: 409 HFGYGRGPVLLDNVGCAGTEARLSDCFHLGWGQHNCGHHEDAGAICS 455
Score = 117 bits (293), Expect = 4e-26
Identities = 60/131 (45%), Positives = 72/131 (54%)
Frame = +2
Query: 134 DQVLPGKAMAPXXXXXXXXXVTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSL 313
D+ LP + T G +G +RL GG +GRVEI + G WGTVCD
Sbjct: 169 DEFLPTQPPTRRVLTSREPPTTPQNGKGEGSVRLVGGAGPCQGRVEILHGGLWGTVCDDD 228
Query: 314 WDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSD 493
W L DA+VVCR LG A A FG G+G I+LD V CEG E LA C SLGW +
Sbjct: 229 WGLPDAAVVCRQLGCGAALAATTNAFFGYGTGHILLDNVHCEGGEPRLAACLSLGWGVHN 288
Query: 494 CGHNEDASVIC 526
CGH+EDA +C
Sbjct: 289 CGHHEDAGALC 299
Score = 117 bits (293), Expect = 4e-26
Identities = 55/107 (51%), Positives = 68/107 (63%)
Frame = +2
Query: 215 KDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAF 394
+DG +RLA G EGRVE+F +WGTVCD WDL A V+CR LG +A G A F
Sbjct: 477 RDGHLRLANGAHRCEGRVELFLGQRWGTVCDDAWDLRAAGVLCRQLGCGQALEAPGEAHF 536
Query: 395 GPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKE 535
GPG GPI+LD V+C G E +L C + W +C H+EDASV+C E
Sbjct: 537 GPGRGPILLDNVKCRGDESALLLCSHIRWDAHNCDHSEDASVLCQPE 583
Score = 107 bits (268), Expect = 3e-23
Identities = 48/101 (47%), Positives = 64/101 (63%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
++RL GG + GR+E+ + G WG+VCD WD+ DA+VVCR LG AFG G
Sbjct: 68 ELRLVGGPSRCRGRLEVLHGGSWGSVCDDDWDVVDANVVCRQLGCGLALPVPRPLAFGQG 127
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GPI+LD VEC G E +L++C S GW +C H ED +V+C
Sbjct: 128 RGPILLDNVECRGQEAALSECGSRGWGVHNCFHYEDVAVLC 168
>ref|XP_002698598.1| PREDICTED: deleted in malignant brain tumors 1, partial [Bos
taurus].
Length = 1333
Score = 121 bits (303), Expect = 3e-27
Identities = 56/101 (55%), Positives = 66/101 (65%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GE +GRVE+ Y G WGTVCD WD DA+VVCR LG + A GGA FG GS
Sbjct: 7 LRLVNGEHRCQGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGSAISAPGGARFGQGS 66
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C W +CGH+EDASVIC+
Sbjct: 67 GPIVLDDVGCSGYETYLWSCSHSPWNSHNCGHSEDASVICS 107
Score = 118 bits (296), Expect = 2e-26
Identities = 58/112 (51%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Frame = +2
Query: 197 TGTQGVKDG-DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
T G + G +RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG +
Sbjct: 250 TTAYGTESGLALRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGSAIS 309
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
A GGA FG GSGPI+LD+V C G E L C W +CGH+EDASVIC+
Sbjct: 310 APGGARFGQGSGPIVLDDVGCSGYETYLWSCSHSPWNTHNCGHSEDASVICS 361
Score = 118 bits (296), Expect = 2e-26
Identities = 53/90 (58%), Positives = 62/90 (68%)
Frame = +2
Query: 260 GRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECE 439
GRVEI++ GQWGTVCD WD+ DA VVCR LG A G A FG GSGPI LD+V C
Sbjct: 761 GRVEIYHGGQWGTVCDDNWDVQDAQVVCRQLGCGYAVSAPGNAYFGSGSGPITLDDVVCS 820
Query: 440 GTELSLADCRSLGWMQSDCGHNEDASVICT 529
G E +L CR+ GW +CGH+EDA VIC+
Sbjct: 821 GAESNLWQCRNRGWFYHNCGHHEDAGVICS 850
Score = 118 bits (295), Expect = 2e-26
Identities = 55/101 (54%), Positives = 65/101 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG + A GGA FG GS
Sbjct: 388 LRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGSAISAPGGARFGQGS 447
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C W +CGH+EDASVIC+
Sbjct: 448 GPIVLDDVGCSGYETYLWSCSHSPWNTHNCGHSEDASVICS 488
Score = 117 bits (294), Expect = 3e-26
Identities = 55/103 (53%), Positives = 65/103 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GE +GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 134 LRLVNGEHRCQGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGLAISAPGNARFGQGS 193
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKE 535
GPI+LD+V C G E L C W +CGH+EDASVIC+ +
Sbjct: 194 GPIVLDDVGCSGYETYLWSCSHSPWNSHNCGHSEDASVICSAD 236
Score = 114 bits (285), Expect = 3e-25
Identities = 57/112 (50%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Frame = +2
Query: 197 TGTQGVKDG-DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
T G + G +RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG
Sbjct: 504 TTAYGTESGLALRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGWAIS 563
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
A G A FG GSGPI+LD+V C G E L C W +CGH+EDASVIC+
Sbjct: 564 APGDARFGQGSGPIVLDDVGCSGHETYLWSCSHSPWNSHNCGHSEDASVICS 615
>ref|XP_002698159.1| PREDICTED: scavenger receptor cysteine rich domain containing,
group B (4 domains) [Bos taurus].
Length = 583
Score = 121 bits (303), Expect = 3e-27
Identities = 56/107 (52%), Positives = 65/107 (60%)
Frame = +2
Query: 209 GVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGA 388
G K G +RL GG GRVE+ Y+G WGTVCD WD DA V CR G A G
Sbjct: 349 GKKSGRLRLVGGPGPCRGRVEVLYAGGWGTVCDDDWDFADARVACREAGCGPALGATGLG 408
Query: 389 AFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
FG G GP++LD V C GTE L+DC LGW Q +CGH+EDA IC+
Sbjct: 409 HFGYGRGPVLLDNVGCAGTEARLSDCFHLGWGQHNCGHHEDAGAICS 455
Score = 117 bits (293), Expect = 4e-26
Identities = 60/131 (45%), Positives = 72/131 (54%)
Frame = +2
Query: 134 DQVLPGKAMAPXXXXXXXXXVTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSL 313
D+ LP + T G +G +RL GG +GRVEI + G WGTVCD
Sbjct: 169 DEFLPTQPPTRRVLTSREPPTTPQNGKGEGSVRLVGGAGPCQGRVEILHGGLWGTVCDDD 228
Query: 314 WDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSD 493
W L DA+VVCR LG A A FG G+G I+LD V CEG E LA C SLGW +
Sbjct: 229 WGLPDAAVVCRQLGCGAALAATTNAFFGYGTGHILLDNVHCEGGEPRLAACLSLGWGVHN 288
Query: 494 CGHNEDASVIC 526
CGH+EDA +C
Sbjct: 289 CGHHEDAGALC 299
Score = 117 bits (293), Expect = 4e-26
Identities = 55/107 (51%), Positives = 68/107 (63%)
Frame = +2
Query: 215 KDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAF 394
+DG +RLA G EGRVE+F +WGTVCD WDL A V+CR LG +A G A F
Sbjct: 477 RDGHLRLANGAHRCEGRVELFLGQRWGTVCDDAWDLRAAGVLCRQLGCGQALEAPGEAHF 536
Query: 395 GPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKE 535
GPG GPI+LD V+C G E +L C + W +C H+EDASV+C E
Sbjct: 537 GPGRGPILLDNVKCRGDESALLLCSHIRWDAHNCDHSEDASVLCQPE 583
Score = 107 bits (268), Expect = 3e-23
Identities = 48/101 (47%), Positives = 64/101 (63%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
++RL GG + GR+E+ + G WG+VCD WD+ DA+VVCR LG AFG G
Sbjct: 68 ELRLVGGPSRCRGRLEVLHGGSWGSVCDDDWDVVDANVVCRQLGCGLALPVPRPLAFGQG 127
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GPI+LD VEC G E +L++C S GW +C H ED +V+C
Sbjct: 128 RGPILLDNVECRGQEAALSECGSRGWGVHNCFHYEDVAVLC 168
>ref|NP_001177353.1| hypothetical protein LOC514534 [Bos taurus].
Length = 1457
Score = 120 bits (302), Expect = 4e-27
Identities = 55/101 (54%), Positives = 68/101 (67%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GG+ + GRVE+++SG WGTVCD W L +A VVC+ LG +AL A FGPG+
Sbjct: 1158 LRLRGGDTECSGRVEVWHSGSWGTVCDDSWSLEEAKVVCQQLGCGQALEALQAATFGPGN 1217
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G I LDEV+C G E SL DC + W QSDC H EDA V C+
Sbjct: 1218 GSIWLDEVQCRGQESSLWDCAAEPWGQSDCKHKEDAGVRCS 1258
Score = 108 bits (270), Expect = 2e-23
Identities = 52/102 (50%), Positives = 60/102 (58%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVEI G WGT+CD WDL DA VVCR LG A A FG GS
Sbjct: 379 LRLVDGGGHCAGRVEILDQGSWGTICDDGWDLDDAHVVCRQLGCGQALNATTSAHFGAGS 438
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK 532
GPI LD++ C G E L C S GW + DC H +DA VIC++
Sbjct: 439 GPIWLDDLNCTGKESHLWKCPSWGWGRHDCRHKQDAGVICSE 480
Score = 107 bits (266), Expect = 6e-23
Identities = 50/101 (49%), Positives = 59/101 (58%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVEI G WGT+CD WDL DA VVCR LG A+G A FG GS
Sbjct: 589 LRLVDGGGPCAGRVEILDQGSWGTICDDGWDLDDARVVCRQLGCGEALNAMGSAHFGAGS 648
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI LD + C G E + C S GW +C H+ DA V+C+
Sbjct: 649 GPIWLDTLGCRGKESHVWKCPSRGWGAHNCSHDNDAGVVCS 689
Score = 103 bits (256), Expect = 8e-22
Identities = 50/102 (49%), Positives = 58/102 (56%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVEI G WGT+CD WDL DA VVCR L A A FG G
Sbjct: 934 LRLVDGGGLCAGRVEILDQGSWGTICDDGWDLDDARVVCRQLSCGEALNATRSAHFGEGP 993
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK 532
GPI LD++ C G E + C S GW + DC H EDA VIC++
Sbjct: 994 GPIWLDDLNCTGNESHVWRCPSRGWGRHDCRHKEDAGVICSE 1035
Score = 65.1 bits (157), Expect = 2e-10
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+R+ + + G +E+FY+G WG+VC + + SV+CR LG GS
Sbjct: 484 LRMVSEDQECAGWLEVFYNGTWGSVCRNPMEDITVSVICRQLGCGESGTLNTIVGLREGS 543
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDLSGELPEAL 586
P +D + C T+ SL C S W + C E+A + C ++R + +D G +
Sbjct: 544 RPQWVDGIRCRSTDTSLWQCPSDPWNYTSCSPKEEAYISCA-DSRQLRLVDGGGPCAGRV 602
Query: 587 ERIFESQTG--CD 619
E + + G CD
Sbjct: 603 EILDQGSWGTICD 615
Score = 64.3 bits (155), Expect = 4e-10
Identities = 36/99 (36%), Positives = 46/99 (46%)
Frame = +2
Query: 233 LAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGP 412
+ G + +G+VEI SG+W +C S W L +A+VVCR LG GG
Sbjct: 245 VTNGSSQCDGQVEINISGRWRALCASHWSLANANVVCRQLGCGVAISTPGGPHLVGRDDQ 304
Query: 413 IMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
I C G+E L C SDC H ASVIC+
Sbjct: 305 ISTVRFHCLGSESFLWSCPVTSLGGSDCSHGNTASVICS 343
Score = 63.2 bits (152), Expect = 9e-10
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
++RL G EGRVE+ Y G+WGTV W + VCR L A G+ FGP
Sbjct: 27 ELRLKDGAHRCEGRVEVKYKGEWGTVYAENWLINGVEDVCRRLECGVAIDAPRGSYFGPR 86
Query: 404 SGPIMLDEVECEGTE----LSLADCRSLGW--MQSDCGHNEDASVICTKETR 541
GPI V CE E LS+ C + + H++D +C+ R
Sbjct: 87 LGPIWFSYVSCESIEAESTLSIYKCVHIDFKNYNDTFSHDQDIGAVCSGSVR 138
Score = 61.2 bits (147), Expect = 3e-09
Identities = 30/98 (30%), Positives = 49/98 (50%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+R+ + + G +E+FY+G WG+VC S D S++C LG + GS
Sbjct: 1039 LRMVSEDQECAGWLEVFYNGTWGSVCRSPMDDVTVSIICSQLGCGDSGSLNTSVGLREGS 1098
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASV 520
P +D ++C+ T+ SL C S W + C E+A +
Sbjct: 1099 RPHWVDGIQCQRTDPSLWQCPSDPWNYNSCFPKEEAYI 1136
Score = 60.1 bits (144), Expect = 8e-09
Identities = 35/106 (33%), Positives = 45/106 (42%)
Frame = +2
Query: 212 VKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAA 391
V G +RL GG+ GRVE+ W V D + L A V+C LG V L
Sbjct: 132 VCSGSVRLFGGDRPCSGRVEVHSGKAWIPVSDGNFTLPTAQVICAELGCGKVASVLKHMP 191
Query: 392 FGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
F G + +E CEG E L C + C H+ A V C+
Sbjct: 192 FRESDGQVWAEEFRCEGEEPELRVCPRVPCPGGTCHHSGAAQVACS 237
Score = 59.7 bits (143), Expect = 1e-08
Identities = 34/106 (32%), Positives = 45/106 (42%)
Frame = +2
Query: 212 VKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAA 391
V G +RL G + GRVE+ W V D + L A V+C LG LG
Sbjct: 687 VCSGFVRLVGDDGPCSGRVEVRPGEDWTPVSDGNFTLPTAQVICAELGCGEAVSVLGHEL 746
Query: 392 FGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
F G + +E CEG E L C + C H+ A V+C+
Sbjct: 747 FRESDGQVWAEEFRCEGEERKLWWCPRVPCPGGTCHHSGAAQVVCS 792
Score = 58.9 bits (141), Expect = 2e-08
Identities = 33/99 (33%), Positives = 42/99 (42%)
Frame = +2
Query: 233 LAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGP 412
+ G + EG+VE+ SG+W +C S W L +A+VVCR LG G
Sbjct: 800 MTNGSSQCEGQVEMKISGRWRALCASHWSLANANVVCRQLGCGIAISTPRGPHLVERGDQ 859
Query: 413 IMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
I C G E L C DC H ASV C+
Sbjct: 860 ISTVRFHCSGAESFLWSCPVTALGGPDCSHGNTASVTCS 898
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 79,147,913
Number of extensions: 2379615
Number of successful extensions: 13038
Number of sequences better than 1.0e-05: 57
Number of HSP's gapped: 12832
Number of HSP's successfully gapped: 296
Length of query: 710
Length of database: 17,681,374
Length adjustment: 109
Effective length of query: 601
Effective length of database: 14,074,782
Effective search space: 8458943982
Effective search space used: 8458943982
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Animal-Genome cDNA 20110601C-012726
Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012726
(2130 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_540464.2| PREDICTED: similar to Galectin-3 binding protei... 808 0.0
Alignment gi|XP_544053.2| PREDICTED: similar to deleted in malignant brai... 124 4e-28
Alignment gi|XP_853901.1| PREDICTED: similar to deleted in malignant brai... 124 5e-28
Alignment gi|XP_548815.2| PREDICTED: similar to scavenger receptor cystei... 123 6e-28
Alignment gi|XP_540405.2| PREDICTED: similar to Galectin-3 binding protei... 122 1e-27
Alignment gi|XP_850005.1| PREDICTED: similar to scavenger receptor cystei... 122 1e-27
Alignment gi|NP_001041485.1| scavenger receptor cysteine-rich type 1 prot... 121 2e-27
Alignment gi|XP_852911.1| PREDICTED: similar to deleted in malignant brai... 121 3e-27
Alignment gi|XP_853855.1| PREDICTED: similar to deleted in malignant brai... 120 5e-27
Alignment gi|XP_853838.1| PREDICTED: similar to deleted in malignant brai... 120 5e-27
>ref|XP_540464.2| PREDICTED: similar to Galectin-3 binding protein precursor (Lectin
galactoside-binding soluble 3 binding protein) (Mac-2
binding protein) (Mac-2 BP) (MAC2BP) (Tumor-associated
antigen 90K) [Canis familiaris].
Length = 559
Score = 808 bits (2086), Expect = 0.0
Identities = 400/547 (73%), Positives = 449/547 (82%), Gaps = 7/547 (1%)
Frame = +2
Query: 194 VTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
V GTQGVKDGDMRLA G+ NEGRVEIFYSG+WGTVCD+LWDL DASVVCRALGF N T+
Sbjct: 13 VAGTQGVKDGDMRLANGDTANEGRVEIFYSGRWGTVCDNLWDLMDASVVCRALGFENATE 72
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHT 553
ALGGAAFGPG GPIMLDEVEC GTE SLA+C SLGWM+S+C HN+DA V+C+ ETRG HT
Sbjct: 73 ALGGAAFGPGKGPIMLDEVECTGTEPSLANCTSLGWMKSNCRHNQDAGVVCSNETRGAHT 132
Query: 554 LDLSGELPEALERIFESQTGCDLFIRVKAKEDELG---LCAHKLILSANPEAHGLWKEPS 724
LDLSGELP ALE+IF+SQ GCDL IRVK K+ E CAH+LIL+ANPEA L K P
Sbjct: 133 LDLSGELPAALEQIFDSQRGCDLSIRVKVKDQEEEGPHFCAHRLILAANPEAQALCKAPG 192
Query: 725 SRVTMEVDAECVPVVRDYIRYLYSRRVDVSLASVQCFHQLASAYGAQQLQSFCAHLFAVL 904
S VTMEVDAEC+PVVRD+IRYLYSRR+D+SL SV+CFH+LASAY AQQLQSFCA LFA+L
Sbjct: 193 STVTMEVDAECLPVVRDFIRYLYSRRLDISLTSVKCFHKLASAYEAQQLQSFCASLFAIL 252
Query: 905 IPQDRSFRAPLDLYAYALASRDPVLEEVCVQFLTWNFEALTQAEAWPSVPAALLHSLLAR 1084
+P+D SF+APLDLYAYALA++DPVLEE+CVQFL WNFE LTQA AWP VP ALL LL+R
Sbjct: 253 LPEDPSFQAPLDLYAYALATQDPVLEELCVQFLAWNFEGLTQATAWPRVPTALLQLLLSR 312
Query: 1085 XXXXXXXXXXXXXXXDVWSRERGASHGEVEGLVEKVRFPMMPPRDLFQLQFNLSLYRSHE 1264
DVWS+ER SHGEV LV+KVRFPMM P LF+LQFNLSLY SHE
Sbjct: 313 SELAVPSELALLTALDVWSQERRPSHGEVARLVDKVRFPMMLPEHLFELQFNLSLYWSHE 372
Query: 1265 ALFQRKTLQALEFHTVPFQLLAQYRGLNLSGDAYRPRLYTSPRWSA--NQTASAY--SPY 1432
ALFQ+K LQALEFHTVPF+LLAQ+RGLNL+ DAY+PRLYTSP WSA ++++S Y PY
Sbjct: 373 ALFQKKILQALEFHTVPFRLLAQHRGLNLTEDAYQPRLYTSPTWSASVSRSSSRYWNYPY 432
Query: 1433 ESFQTPKHPSFLFQDSSVSWSFVYLPTVQSCWNYGFSCSPDEPPLLGLSKTSSLDPTIGY 1612
+SFQTP+HPSFLFQ+ +SWS VYLPTVQSCWNYGFSCS DE PLLGLSK+ DPTIGY
Sbjct: 433 QSFQTPQHPSFLFQNKYISWSLVYLPTVQSCWNYGFSCSSDEVPLLGLSKSDYSDPTIGY 492
Query: 1613 ENKALMLCEGSFVADIAAFKDTKALIPSALGTNSSRSAAFFPCPAGFFSSFQAVIRPFYL 1792
ENKALM C G FVAD+ F+ KALIPSALGTNSSR + FPC G FSSFQ VIRPFYL
Sbjct: 493 ENKALMRCGGRFVADVTDFEGQKALIPSALGTNSSRRPSLFPCLGGSFSSFQVVIRPFYL 552
Query: 1793 TNSSGVD 1813
TNSS VD
Sbjct: 553 TNSSDVD 559
>ref|XP_544053.2| PREDICTED: similar to deleted in malignant brain tumors 1 isoform a
precursor [Canis familiaris].
Length = 1169
Score = 124 bits (311), Expect = 4e-28
Identities = 55/102 (53%), Positives = 66/102 (64%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
++RL GG GRVE+ + G WGTVCD LWDL +A VVCR LG A G A FGPG
Sbjct: 98 ELRLVGGSGRCSGRVEVLHEGAWGTVCDDLWDLNEAQVVCRQLGCGRAIAAPGKAHFGPG 157
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
SG I+LD ++C G E L C S GW +CGH+EDA VIC+
Sbjct: 158 SGSILLDNIQCSGNENHLGQCPSSGWSDHNCGHHEDAGVICS 199
Score = 121 bits (303), Expect = 3e-27
Identities = 56/103 (54%), Positives = 67/103 (65%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
D D+RL GG + EGRVE+ + G WGTVCD WD+ DA VVCR LG ALG FG
Sbjct: 701 DPDLRLVGGRSRCEGRVEVRHQGVWGTVCDDHWDIRDARVVCRLLGCGPALAALGRGHFG 760
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
G GPI+LD+V C GTE +L CR GW + +C H EDA V+C
Sbjct: 761 LGLGPILLDDVHCVGTEDALGHCRHSGWARHNCRHQEDAGVVC 803
Score = 118 bits (295), Expect = 3e-26
Identities = 57/104 (54%), Positives = 66/104 (63%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
D +RLAGG EGRVE+ Y+G WGTVCD WDL DA VVCR L A G A F
Sbjct: 597 DVALRLAGGSHQCEGRVELHYNGTWGTVCDDSWDLRDAQVVCRQLSCGWAVSAPGRAHFH 656
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G GPI LD+V+C GTE +L C W +CGH+EDASVIC+
Sbjct: 657 QGLGPIALDDVQCVGTEATLWQCLHSDWFSHNCGHHEDASVICS 700
Score = 115 bits (287), Expect = 2e-25
Identities = 51/101 (50%), Positives = 66/101 (65%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G EGRVE+ Y+G WGTVCD WD+TDA VVC+ LG A G + F G+
Sbjct: 352 LRLVNGSHKCEGRVEVLYNGTWGTVCDDNWDMTDAKVVCQQLGCGEALSAPGQSYFDGGT 411
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G IMLD+V+C+G E + C GW +CGH++DASVIC+
Sbjct: 412 GHIMLDDVQCKGNEAKVWQCTHNGWFSHNCGHHKDASVICS 452
>ref|XP_853901.1| PREDICTED: similar to deleted in malignant brain tumors 1 isoform b
precursor [Canis familiaris].
Length = 903
Score = 124 bits (310), Expect = 5e-28
Identities = 55/102 (53%), Positives = 66/102 (64%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
++RL G GRVE+ + G WGTVCD LWDL +A VVCR LG ALG A FGPG
Sbjct: 784 ELRLVDGSGRCSGRVEVLHQGAWGTVCDDLWDLNEAEVVCRQLGCGRAVSALGKAHFGPG 843
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
SG I LD ++C G E L C GW + +CGH+EDASVIC+
Sbjct: 844 SGNIFLDNLQCSGVERYLGQCAHSGWSEHNCGHHEDASVICS 885
Score = 118 bits (296), Expect = 2e-26
Identities = 53/101 (52%), Positives = 64/101 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+FY G WGTVCD LWDL +A+++CR LG A G A FG GS
Sbjct: 539 VRLVGSHGRCAGRVELFYQGVWGTVCDDLWDLPEANIICRQLGCGWAISAPGEAHFGEGS 598
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G I+LD V C G E L +C +GW +CGH EDA VIC+
Sbjct: 599 GNILLDNVHCRGDEQHLEECSHIGWFSHNCGHTEDAGVICS 639
Score = 107 bits (268), Expect = 3e-23
Identities = 57/133 (42%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ G WGTVCD WDL +A+VVCR L +A GA FG GS
Sbjct: 433 VRLVNGTGRCSGRVEVLIQGTWGTVCDDFWDLAEATVVCRQLQCGQAREAPTGAHFGAGS 492
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDLSGELPEAL 586
G IMLD+V+C G+E L C G + +CGH EDA VIC V + G +
Sbjct: 493 GKIMLDDVQCVGSESHLGQCVHSGEARHNCGHLEDAGVICAGGWAPVRLVGSHGRCAGRV 552
Query: 587 ERIFESQTG--CD 619
E ++ G CD
Sbjct: 553 ELFYQGVWGTVCD 565
Score = 107 bits (267), Expect = 5e-23
Identities = 50/101 (49%), Positives = 57/101 (56%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+FY G WG+VC WDL + VVCR LG A G FGPGS
Sbjct: 76 LRLVNGTGRCSGRVEVFYQGTWGSVCGGSWDLKEVHVVCRQLGCGQAVSAPLGTHFGPGS 135
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G I+LD V C G E LA C W +CGH EDA IC+
Sbjct: 136 GKILLDNVHCSGEESHLALCDHDAWFTHNCGHEEDAGAICS 176
Score = 106 bits (264), Expect = 1e-22
Identities = 58/136 (42%), Positives = 76/136 (55%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ G WGTVCD LWDL +A+VVC L +A GA FG GS
Sbjct: 303 VRLVNGTERCSGRVEVLIQGTWGTVCDDLWDLAEATVVCHQLQCGQAREAPTGAHFGAGS 362
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDLSGELPEAL 586
G I+LD+V+C G+E L C G +CGH EDA V+CT + G+ ++ E P AL
Sbjct: 363 GKIVLDDVQCVGSESHLGQCVHSGEAGHNCGHLEDAGVVCTGD--GLFAAIVTSE-PAAL 419
Query: 587 ERIFESQTGCDLFIRV 634
TG + +R+
Sbjct: 420 LSTPTPPTGASMAVRL 435
Score = 58.2 bits (139), Expect = 3e-08
Identities = 32/98 (32%), Positives = 46/98 (46%)
Frame = +2
Query: 320 LTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCG 499
+ A VVCR L A A FG G G +LD+V+C E L C W +CG
Sbjct: 1 MNKADVVCRQLNCGRALTAPVEAQFGEGEGKFLLDDVDCTERESFLGLCPHTDWSLHNCG 60
Query: 500 HNEDASVICTKETRGVHTLDLSGELPEALERIFESQTG 613
EDASVIC ++ + ++ +G +E ++ G
Sbjct: 61 PGEDASVICLEDWPTLRLVNGTGRCSGRVEVFYQGTWG 98
>ref|XP_548815.2| PREDICTED: similar to scavenger receptor cysteine-rich type 1 protein
M160 precursor [Canis familiaris].
Length = 987
Score = 123 bits (309), Expect = 6e-28
Identities = 57/103 (55%), Positives = 69/103 (66%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+R+ GGE GRVE++++G WGTVCD WDL DA VVCR LG A GAAFGPGS
Sbjct: 755 LRVRGGEDGCSGRVELWHAGSWGTVCDDSWDLADAEVVCRQLGCGPAMDAPMGAAFGPGS 814
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKE 535
GP+ LDEV C G+E SL C + W DCGH EDA V C+++
Sbjct: 815 GPVWLDEVGCRGSETSLWSCPAEPWGLGDCGHKEDAGVRCSRD 857
Score = 102 bits (254), Expect = 1e-21
Identities = 52/102 (50%), Positives = 62/102 (60%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RLAGG GRVE+ G WGTVCD WDL DA VVC LG + +ALG A FG GS
Sbjct: 524 VRLAGGPHRCAGRVEVLLGGAWGTVCDDGWDLRDAQVVCGQLGCGHALRALGAAPFGAGS 583
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK 532
G I + E+ C G E +L C S G CGH EDA V+C++
Sbjct: 584 GRIWMGELRCGGRESALWRCPSGG--AQGCGHKEDAGVVCSE 623
Score = 72.4 bits (176), Expect = 2e-12
Identities = 43/104 (41%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
+ RL GGE GR+E+ WGTVCD+ D A VVCR L + A GA FG G
Sbjct: 213 EARLEGGEHPCAGRLEVRRGLTWGTVCDADLDQATAHVVCRELRCGSAVWAPSGAHFGLG 272
Query: 404 SGPIMLDEVECEGTELSLADC-RSLGWMQSDCGHNEDASVICTK 532
SGP+ + C G E L C R G CGH DA + C++
Sbjct: 273 SGPVWTEAFRCAGNESLLFHCPRGPG---HRCGHRRDAGLRCSE 313
Score = 66.2 bits (160), Expect = 1e-10
Identities = 35/107 (32%), Positives = 47/107 (43%)
Frame = +2
Query: 209 GVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGA 388
G++ + RL G EGRVE+ G W +C + WDL DA+V+C L + G
Sbjct: 308 GLRCSEFRLVNGSGGCEGRVELQVQGAWAPICAAHWDLADATVLCHQLNCGSAEATPPGG 367
Query: 389 AFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
FG G I D C GTE L C C A+ +C+
Sbjct: 368 HFGAGDVGIWPDAFHCAGTEPYLWHCPVSTLGNRACAPGSTAAAVCS 414
Score = 65.1 bits (157), Expect = 3e-10
Identities = 37/105 (35%), Positives = 49/105 (46%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GG + +GR E+ G WG V D+ WDL A+VVC LG +A A +
Sbjct: 420 LRLRGGHSRCDGRAEVSLDGAWGRVLDAAWDLRAAAVVCAQLGCGRAHRAY-DAPPPSRA 478
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETR 541
P+ L C GTE L C G + DA V+C+ R
Sbjct: 479 LPVGLSRARCRGTETRLTQCNVSRSALVPAGTSRDAGVVCSGSRR 523
Score = 61.2 bits (147), Expect = 4e-09
Identities = 37/107 (34%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL + +G V + G+WG VC+ W L +ASVVCR LG A+G + P
Sbjct: 10 LRLGYRHSPCDGVVLVGRDGEWGHVCNQEWTLAEASVVCRQLG---CGPAVGAPKYVPLL 66
Query: 407 GPIM---LDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKET 538
G + L V C G E S DC W Q+ C H +C T
Sbjct: 67 GETLRPRLHNVSCRGDEPSFWDCSLGAWTQTACPHEWVVVALCANGT 113
Score = 60.8 bits (146), Expect = 5e-09
Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GG G +++FY+G WG VC + S++C+ LG L GS
Sbjct: 627 LRLRGGTQRCAGWLDVFYNGTWGAVCSNALQDISMSIICKQLGC-GEQGWLENRPVPTGS 685
Query: 407 GPIMLDEVECEGTELS-LADCRSLGWMQSDCGHNEDASVIC-------TKETRGVHTLDL 562
GP +D +EC S L C S W C E+A + C T+++R
Sbjct: 686 GPSWVDNIECRRLRNSTLWQCPSAPWHPQSCAPGEEAWITCAGVSEKMTQDSREPLNCSS 745
Query: 563 SGELP-EALERIFESQTGC 616
+ P EA+ R+ + GC
Sbjct: 746 THSCPGEAVLRVRGGEDGC 764
>ref|XP_540405.2| PREDICTED: similar to Galectin-3 binding protein precursor (Lectin
galactoside-binding soluble 3 binding protein) (Mac-2
binding protein) (Mac-2 BP) (MAC2BP) (Tumor-associated
antigen 90K) [Canis familiaris].
Length = 478
Score = 122 bits (307), Expect = 1e-27
Identities = 93/341 (27%), Positives = 143/341 (41%), Gaps = 16/341 (4%)
Frame = +2
Query: 536 TRGVHTLDLSGE-----------LPEALERIFESQTGCDLFIRVKAK-EDELGLC-AHKL 676
TR D+ GE L + L+ + D+ +RV+A DE+ + H+L
Sbjct: 26 TRAAQRADVGGESTGTSINHSQTLLQRLQELLRQGNASDVVLRVQAAGTDEVRVFHTHRL 85
Query: 677 ILSANPEAHGLWKEPSSRVTMEVDAECVPVVRDYIRYLYSRRVDVSLASVQCFHQLASAY 856
+L + E S V ++ +C V +IRYLY + V LA H+LA+ Y
Sbjct: 86 LLGLHSELFRELLSNQSEVVLQEPRDCAAVFDKFIRYLYCGELTVLLAQAIPLHRLATKY 145
Query: 857 GAQQLQSFCAHLFAVLIPQDRSFRAPLDLYAYALASRDPVLEEVCVQFLTWNFEALTQAE 1036
G LQ A + + Y YA+++ D L + C+QFL WN A+ +
Sbjct: 146 GVASLQRGVADYMRAHLAGGAG--PAVGWYHYAVSTGDEALRQSCLQFLAWNLSAVAASA 203
Query: 1037 AWPSVPAALLHSLLARXXXXXXXXXXXXXXXDVWSRERGASHGEVEGLVEKVRFPMMPPR 1216
W +V LL LL R + W + E + +R+PM+PP
Sbjct: 204 EWGAVSPELLAQLLPRSDLVLQDELELFHALEAWLGRTRPAPAVAERALRAIRYPMIPPA 263
Query: 1217 DLFQLQFNLSLYRSHEALFQRKTLQALEFHTVPFQLLAQYRGLNLSGDAYRPRLYTSPRW 1396
LFQLQ + H LQA +FH A++ +++G A+ PR Y +P W
Sbjct: 264 QLFQLQARSAALARHGPAVADLLLQAYQFHAASPLHFAKF--FDVNGSAFLPRNYLAPAW 321
Query: 1397 SANQTASAYSPYE---SFQTPKHPSFLFQDSSVSWSFVYLP 1510
A S + + SFQT PS V+W+ ++ P
Sbjct: 322 GAPWVISNPARDDRSTSFQTQLGPSGHDAGRRVTWNVLFSP 362
>ref|XP_850005.1| PREDICTED: similar to scavenger receptor cysteine rich domain
containing, group B (4 domains) [Canis familiaris].
Length = 586
Score = 122 bits (307), Expect = 1e-27
Identities = 60/125 (48%), Positives = 71/125 (56%)
Frame = +2
Query: 197 TGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKA 376
T G K G +RL GG GRVE+ Y+G WGTVCD WD DA V CR G A
Sbjct: 345 TWASGKKSGRLRLVGGPGPCRGRVEVMYAGGWGTVCDDDWDFADARVACREAGCGPALGA 404
Query: 377 LGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTL 556
G FG G GP++LD V C GTE L+DC LGW Q +CGH+EDA +C+ G L
Sbjct: 405 TGLGHFGYGRGPVLLDNVGCAGTEARLSDCFHLGWGQHNCGHHEDAGALCS----GPEEL 460
Query: 557 DLSGE 571
L G+
Sbjct: 461 GLQGQ 465
Score = 118 bits (296), Expect = 2e-26
Identities = 60/131 (45%), Positives = 73/131 (55%)
Frame = +2
Query: 134 DQVLPGKAMAPXXXXXXXXXVTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSL 313
D+ LP + T G +G +RL GG +GRVEI + G WGTVCD
Sbjct: 169 DEFLPTQLPTRKVIISRAPPTTPQNGKGEGSVRLVGGAGPCQGRVEILHGGLWGTVCDDD 228
Query: 314 WDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSD 493
W L DA+VVCR LG A A FG G+G I+LD V CEG+E LA C SLGW +
Sbjct: 229 WGLPDAAVVCRQLGCGAALAATTNAFFGYGTGHILLDNVHCEGSEPHLAACLSLGWGVHN 288
Query: 494 CGHNEDASVIC 526
CGH+EDA +C
Sbjct: 289 CGHHEDAGALC 299
Score = 117 bits (292), Expect = 6e-26
Identities = 54/104 (51%), Positives = 67/104 (64%)
Frame = +2
Query: 215 KDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAF 394
+DG +RLA G EGRVE+F +WGTVCD WDL A+V+CR LG A G A F
Sbjct: 480 RDGHLRLANGAHQCEGRVELFLGQRWGTVCDDAWDLRAATVLCRQLGCGQALAAPGEAHF 539
Query: 395 GPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GPG GPI+LD V+C G E +L C + W +C H+EDASV+C
Sbjct: 540 GPGQGPILLDNVKCRGDESALLLCSHIRWDAHNCDHSEDASVLC 583
Score = 108 bits (271), Expect = 2e-23
Identities = 49/101 (48%), Positives = 64/101 (63%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
++RL GG + GR+E+ + G WG+VCD WD+ DA+VVCR LG AFG G
Sbjct: 68 ELRLVGGPSRCRGRLEVLHGGSWGSVCDDDWDVVDANVVCRQLGCGLALPVPRPLAFGQG 127
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GPI+LD VEC G E +L+ CRS GW +C H ED +V+C
Sbjct: 128 RGPILLDNVECGGQEAALSQCRSRGWGVHNCFHYEDVAVLC 168
>ref|NP_001041485.1| scavenger receptor cysteine-rich type 1 protein M130 precursor [Canis
lupus familiaris].
Length = 1133
Score = 121 bits (304), Expect = 2e-27
Identities = 54/107 (50%), Positives = 67/107 (62%)
Frame = +2
Query: 212 VKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAA 391
+ G +RL G GR+E+++ G WGT+CD WDL+DA VVCR LG A G A
Sbjct: 713 IASGQLRLVNGGGRCAGRIEVYHEGSWGTICDDSWDLSDAHVVCRQLGCGVAINATGSAH 772
Query: 392 FGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK 532
FG G+GPI LDEV C G E + CRS GW Q +C H EDA VIC++
Sbjct: 773 FGEGTGPIWLDEVNCNGKESHIWQCRSHGWGQHNCRHKEDAGVICSE 819
Score = 119 bits (297), Expect = 2e-26
Identities = 55/102 (53%), Positives = 71/102 (69%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G ++ GRVE+++ G WGTVCD WDL DA VVCR LG +AL AAFG G+
Sbjct: 928 IRLQEGTSNCSGRVELWHGGSWGTVCDDSWDLEDAQVVCRQLGCGPALEALKEAAFGQGT 987
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK 532
GPI L++V+C+G E SL DC + W SDCGH EDA+V C++
Sbjct: 988 GPIWLNDVKCKGNESSLWDCPARPWGHSDCGHKEDAAVRCSE 1029
Score = 102 bits (254), Expect = 1e-21
Identities = 48/112 (42%), Positives = 66/112 (58%)
Frame = +2
Query: 194 VTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
+T + G D +MRL GE + GRVE+ +WGTVC++ W + + SV+CR LG K
Sbjct: 40 MTNSLGRADKEMRLTDGEDNCSGRVEVKVQEEWGTVCNNGWGMDEVSVICRQLGCPTAIK 99
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
A G A GSG I +D V C G E +L DC+ GW + +C H +DA V C+
Sbjct: 100 AAGWANSRAGSGRIWMDHVSCRGNESALWDCKHDGWGKHNCSHQQDAGVTCS 151
Score = 99.8 bits (247), Expect = 9e-21
Identities = 46/104 (44%), Positives = 60/104 (57%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
D +RL G + GR+E+ + G+WGTVCD WD DA+VVC+ LG A+G
Sbjct: 262 DLSLRLVDGVTECSGRLEVKFQGEWGTVCDDGWDSNDAAVVCKQLGCPTAVTAIGRVNAS 321
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GSG I LD + C+G E +L CR W + C HNEDA V C+
Sbjct: 322 EGSGHIWLDNLSCQGDESALWQCRHHEWGKHYCNHNEDAGVTCS 365
Score = 99.0 bits (245), Expect = 2e-20
Identities = 45/101 (44%), Positives = 61/101 (60%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
+MRL G GR+E+ + GQWGTVCD +++ ASVVC+ L + G A FG G
Sbjct: 157 EMRLMNGGNQCSGRIEVKFQGQWGTVCDDNFNIDHASVVCKQLECGSAVSFSGSANFGEG 216
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
SGPI D++ C G E +L +C+ GW + +C H ED VIC
Sbjct: 217 SGPIWFDDLVCSGNESALWNCKHEGWGKHNCDHAEDVGVIC 257
Score = 91.3 bits (225), Expect = 3e-18
Identities = 45/103 (43%), Positives = 58/103 (56%)
Frame = +2
Query: 230 RLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSG 409
RL GG+ GRVE+ + WGTVCDS + L ASV+CR L V LGGA FG G+G
Sbjct: 478 RLVGGDIPCSGRVEVKHGDTWGTVCDSDFSLEAASVLCRELQCGTVISILGGAHFGEGNG 537
Query: 410 PIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKET 538
I +E +CEG E L+ C C H+ D V+C++ T
Sbjct: 538 QIWAEEFQCEGQESHLSLCSVASRPDGTCSHSRDVGVVCSRYT 580
Score = 80.1 bits (196), Expect = 8e-15
Identities = 41/102 (40%), Positives = 55/102 (53%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
++RL G++ EGRVE+ G WG++C+S WD+ DA V C+ L GGA FG G
Sbjct: 581 EIRLVNGQSPCEGRVELKILGNWGSLCNSHWDIEDAHVFCQQLKCGVALSIPGGAHFGKG 640
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
SG I C GTE + DC + C + ASVIC+
Sbjct: 641 SGQIWRHMFHCTGTEQHMGDCPVTALGATLCSAGQVASVICS 682
Score = 61.6 bits (148), Expect = 3e-09
Identities = 39/112 (34%), Positives = 52/112 (46%)
Frame = +2
Query: 194 VTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
VT + G D ++RL GG + G VE+ G VCD W L +A VVC+ LG + K
Sbjct: 362 VTCSDG-SDLELRLVGGGSRCAGTVEVEIQKLLGKVCDRGWGLKEADVVCKQLGCGSALK 420
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
+ L C G E SL DC++ W C H E+A V C+
Sbjct: 421 TSYQRYSKVKATNTWLFLSRCSGNETSLWDCKNWQWGGLSCDHYEEAKVTCS 472
Score = 55.5 bits (132), Expect = 2e-07
Identities = 30/94 (31%), Positives = 45/94 (47%)
Frame = +2
Query: 260 GRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECE 439
GR+E+FY+G WG+V S T VVCR LG + ++ P S + +D V+C
Sbjct: 836 GRLEVFYNGAWGSVGKSNMSATTVEVVCRQLGCADKGSINPASSDKPMSRHMWVDNVQCP 895
Query: 440 GTELSLADCRSLGWMQSDCGHNEDASVICTKETR 541
+L C S W Q +E+ + C + R
Sbjct: 896 KGPDTLWQCPSSPWKQRVASSSEETWITCANKIR 929
>ref|XP_852911.1| PREDICTED: similar to deleted in malignant brain tumors 1 isoform c
precursor, partial [Canis familiaris].
Length = 201
Score = 121 bits (303), Expect = 3e-27
Identities = 57/104 (54%), Positives = 66/104 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG T A G A FG GS
Sbjct: 55 LRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGWATSAPGNARFGQGS 114
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKET 538
GPI+LD+V C G E L C GW +CGH+EDASVIC+ T
Sbjct: 115 GPIVLDDVRCSGHESYLWSCSHNGWNSHNCGHSEDASVICSAST 158
>ref|XP_853855.1| PREDICTED: similar to deleted in malignant brain tumors 1 isoform c
precursor [Canis familiaris].
Length = 335
Score = 120 bits (301), Expect = 5e-27
Identities = 59/111 (53%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Frame = +2
Query: 203 TQGVKDGDM--RLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKA 376
T G+ D + RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG T A
Sbjct: 191 TTGIFDSGLALRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGWATSA 250
Query: 377 LGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G A FG GSGPI+LD+V C G E L C GW +CGH+EDASVIC+
Sbjct: 251 PGNARFGQGSGPIVLDDVRCSGHESYLWSCSHNGWNSHNCGHSEDASVICS 301
Score = 115 bits (289), Expect = 1e-25
Identities = 55/103 (53%), Positives = 65/103 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG T A A FG GS
Sbjct: 70 LRLVNGGDRCQGRVEVLYRGSWGTVCDDGWDTNDANVVCRQLGCGWATSAPHNAHFGQGS 129
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKE 535
GPI+LD+V C G E L C GW +CGH EDASVIC+++
Sbjct: 130 GPIVLDDVSCSGYESYLWSCSHSGWNSHNCGHYEDASVICSEQ 172
>ref|XP_853838.1| PREDICTED: similar to deleted in malignant brain tumors 1 isoform b
precursor [Canis familiaris].
Length = 501
Score = 120 bits (301), Expect = 5e-27
Identities = 55/101 (54%), Positives = 64/101 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GG +GRVE+ Y G WGTVCD WD+ DA+VVCR LG A G A FG GS
Sbjct: 142 LRLVGGSNQCQGRVEMLYQGSWGTVCDDDWDINDANVVCRQLGCGLAVSAPGNARFGQGS 201
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD V C G E L +C GW +CGH EDA VIC+
Sbjct: 202 GPIVLDNVRCSGNEFYLWNCSHNGWNLHNCGHGEDAGVICS 242
Score = 119 bits (299), Expect = 9e-27
Identities = 56/101 (55%), Positives = 65/101 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD +DA+VVCR LG T A G A FG GS
Sbjct: 265 LRLVSGGDRCQGRVEVLYQGSWGTVCDDDWDTSDANVVCRQLGCGWATSATGSAYFGQGS 324
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD V C G E SL C GW +CGH+EDA VIC+
Sbjct: 325 GPIVLDNVRCSGYESSLWSCSHNGWKVHNCGHSEDAGVICS 365
Score = 115 bits (289), Expect = 1e-25
Identities = 55/101 (54%), Positives = 64/101 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD +DA+VVCR LG T A G A FG GS
Sbjct: 392 LRLVNGGDRCQGRVEVLYGGSWGTVCDDDWDTSDANVVCRQLGCGWATSAPGYARFGQGS 451
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD V C G E L C GW +CGH+EDA VIC+
Sbjct: 452 GPIVLDNVRCSGHESYLWSCPHNGWNSHNCGHSEDAGVICS 492
Score = 112 bits (281), Expect = 1e-24
Identities = 56/111 (50%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Frame = +2
Query: 206 QGVKDG---DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKA 376
QG DG +RL G +GRVE+ Y G WGTVCD WD+ DA VVCR LG A
Sbjct: 8 QGQWDGAGLPLRLVNGSDRCQGRVEVLYQGYWGTVCDDDWDIQDADVVCRQLGCGLAVSA 67
Query: 377 LGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GGA FG GSG I+L V C G E L+ C GW +CGH EDA V+C+
Sbjct: 68 PGGAHFGQGSGNILLGFVYCSGREPYLSSCSHGGWYNHECGHGEDAGVVCS 118
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 82,412,449
Number of extensions: 2443735
Number of successful extensions: 13469
Number of sequences better than 1.0e-05: 39
Number of HSP's gapped: 13178
Number of HSP's successfully gapped: 98
Length of query: 710
Length of database: 18,874,504
Length adjustment: 110
Effective length of query: 600
Effective length of database: 15,207,544
Effective search space: 9124526400
Effective search space used: 9124526400
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012726
(2130 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003129275.1| PREDICTED: neurotrypsin [Sus scrofa]. 131 2e-30
Alignment gi|XP_003359460.1| PREDICTED: putative scavenger receptor cyste... 127 2e-29
Alignment gi|XP_003133265.2| PREDICTED: hypothetical protein LOC100519221... 126 5e-29
Alignment gi|NP_001041653.1| deleted in malignant brain tumors 1 protein ... 125 7e-29
Alignment gi|XP_003359439.1| PREDICTED: deleted in malignant brain tumors... 125 1e-28
Alignment gi|XP_001926649.3| PREDICTED: putative scavenger receptor cyste... 123 5e-28
Alignment gi|XP_003355637.1| PREDICTED: antigen WC1.1-like [Sus scrofa]. 123 5e-28
Alignment gi|NP_999141.1| scavenger receptor cysteine-rich type 1 protein... 122 8e-28
Alignment gi|NP_001116565.1| scavenger receptor cysteine-rich type 1 prot... 120 2e-27
Alignment gi|XP_003124464.2| PREDICTED: LOW QUALITY PROTEIN: scavenger re... 120 3e-27
>ref|XP_003129275.1| PREDICTED: neurotrypsin [Sus scrofa].
Length = 875
Score = 131 bits (329), Expect = 2e-30
Identities = 59/107 (55%), Positives = 71/107 (66%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GG + +EGRVE++++GQWGTVCD WD DA VVCR LG + KA A FG GS
Sbjct: 280 LRLTGGSSAHEGRVELYHAGQWGTVCDDQWDDADAEVVCRQLGLSGIAKAWSQAYFGEGS 339
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGV 547
GP+MLDEV C G ELS+ C W + +C H EDA V CT T GV
Sbjct: 340 GPVMLDEVRCTGNELSIEQCPKSSWGEHNCDHKEDAGVSCTPLTDGV 386
Score = 108 bits (270), Expect = 1e-23
Identities = 51/100 (51%), Positives = 65/100 (65%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GE EGRVE+F +GQWGT+CD W DA+V+CR LG++ +A A FG G
Sbjct: 500 IRLMDGENKKEGRVEVFINGQWGTICDDGWTDKDATVLCRQLGYKGPARARTMAYFGEGK 559
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GPI +D V+C G E SLADC + +C H+EDA VIC
Sbjct: 560 GPIHVDNVKCTGNERSLADCIKQDIGKHNCRHSEDAGVIC 599
Score = 100 bits (249), Expect = 3e-21
Identities = 48/103 (46%), Positives = 62/103 (60%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
DG +RLAG + ++EGR+E+++ GQWGTVCD W + VVCR LGF+ K F
Sbjct: 384 DGVIRLAGNKNNHEGRLEVYHKGQWGTVCDDGWTELNTYVVCRQLGFK-YGKQASANHFE 442
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
+GPI LD+V C G E SL C W + DC H ED S+ C
Sbjct: 443 ESTGPIWLDDVSCLGKETSLLQCSRRPWGRHDCSHWEDVSISC 485
Score = 71.6 bits (174), Expect = 2e-12
Identities = 39/103 (37%), Positives = 51/103 (49%)
Frame = +2
Query: 221 GDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGP 400
G +RL GG+ + EG VE++ +G WGTVC S WD +DASV+C L A G
Sbjct: 168 GSVRLRGGKNEFEGTVEVYANGIWGTVCSSHWDDSDASVICHQLQLGGKGVAKQTPFSGL 227
Query: 401 GSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G PI V C G E ++ C W C A+V C+
Sbjct: 228 GLIPIYWSNVRCRGDEENILLCEKDIWPGGACPQKMAAAVTCS 270
>ref|XP_003359460.1| PREDICTED: putative scavenger receptor cysteine-rich
domain-containing protein LOC619207-like [Sus scrofa].
Length = 839
Score = 127 bits (319), Expect = 2e-29
Identities = 59/105 (56%), Positives = 71/105 (67%)
Frame = +2
Query: 215 KDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAF 394
++G +R+ GGE GRVE++++G WGTVCD WDL DA VVCR LG AL GAAF
Sbjct: 657 EEGALRVRGGEDRCSGRVELWHAGSWGTVCDDSWDLADAEVVCRQLGCGRAVGALVGAAF 716
Query: 395 GPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPGSGP+ LDEV C G+E SL C + W DCGH EDA V C+
Sbjct: 717 GPGSGPVWLDEVGCRGSEASLWGCPAEPWGLGDCGHKEDAGVRCS 761
Score = 109 bits (273), Expect = 5e-24
Identities = 53/101 (52%), Positives = 62/101 (61%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RLA G GRVE+ + G WGTVCD WDL DA VVC LG + A G A FG G+
Sbjct: 431 VRLASGPGRCAGRVEVLHQGVWGTVCDDGWDLRDAHVVCEQLGCGHALSAPGAAHFGAGA 490
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G I +DE+ CEG E +L C S GW DCGH EDA V C+
Sbjct: 491 GRIWMDELGCEGHESALWRCPSGGWGLHDCGHKEDAGVFCS 531
Score = 73.9 bits (180), Expect = 3e-13
Identities = 45/132 (34%), Positives = 60/132 (45%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
+ RL G + EGRVE+ G+W VC + WDLTDA+V+C+ L N G FG G
Sbjct: 219 EFRLVNGSSACEGRVELQVQGRWAPVCAAHWDLTDATVLCQQLNCGNAVATRPGGHFGDG 278
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDLSGELPEA 583
I D C GTE L +C C A+ +C+ LP A
Sbjct: 279 DAGIWPDAFHCVGTEPYLWNCPVSTLGAPACARGNAATAVCS-------------GLPHA 325
Query: 584 LERIFESQTGCD 619
L R+ + Q+ CD
Sbjct: 326 L-RLRDGQSRCD 336
Score = 72.4 bits (176), Expect = 9e-13
Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
D+RLA + +G V + + G+WG VC+ W L +ASVVCR LG +A+G + P
Sbjct: 18 DLRLAYRHSPCDGVVLVRHEGEWGHVCNQEWTLKEASVVCRQLG---CGQAVGAPKYVPL 74
Query: 404 SGPIM---LDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKET 538
SG ++ L V C G E SL C W QS C H +C+ T
Sbjct: 75 SGEVVRPWLHNVSCRGDEASLWGCSLGAWTQSQCPHEWVVVALCSNGT 122
Score = 71.2 bits (173), Expect = 2e-12
Identities = 41/106 (38%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G++ +GRVE+ G WG V D WDL A VVCR LG +A A G G+
Sbjct: 326 LRLRDGQSRCDGRVEVSLDGVWGRVLDDAWDLRGAGVVCRQLGCGEAERAYEAPAPGRGA 385
Query: 407 GPIMLDEVECEGTELSLADCR-SLGWMQSDCGHNEDASVICTKETR 541
P+ L C GTE L C SL + + + DA V+C R
Sbjct: 386 VPLGLSRARCLGTETRLTQCNVSLSPLVPE-EESRDAGVVCAGSLR 430
Score = 52.0 bits (123), Expect = 1e-06
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GG G +++FY+G WG VC + T S++C LG L
Sbjct: 536 LRLRGGSGRCAGWLDVFYNGTWGAVCSNALRDTSLSIICEQLGCGG-QGWLENRPVHTSL 594
Query: 407 GPIMLDEVECEG-TELSLADCRSLGWMQSDCGHNEDASVICTKET 538
G +D ++C +L C S W C E+ + C ++T
Sbjct: 595 GTSWVDNIQCRRLRNTTLWQCPSAPWHPRSCARGEEVWLTCAEKT 639
>ref|XP_003133265.2| PREDICTED: hypothetical protein LOC100519221 [Sus scrofa].
Length = 3078
Score = 126 bits (316), Expect = 5e-29
Identities = 55/102 (53%), Positives = 67/102 (65%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
++RL GG GRVE+ + G WGTVCD LWDL +A VVCR LG ALG A FGPG
Sbjct: 1710 ELRLVGGSGRCSGRVEVLHQGAWGTVCDDLWDLNEAEVVCRQLGCGRAVSALGKAYFGPG 1769
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
SG I+LD ++C G E L C GW + +CGH+EDA VIC+
Sbjct: 1770 SGDILLDNLQCAGVERHLGQCAHSGWSEHNCGHHEDAGVICS 1811
Score = 124 bits (311), Expect = 2e-28
Identities = 54/102 (52%), Positives = 66/102 (64%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
++RL GG GRVE+ + G WGTVCD LWDL +A VVCR LG ALG A F PG
Sbjct: 1581 ELRLVGGSGHCSGRVEVLHQGAWGTVCDDLWDLNEAEVVCRQLGCGRAVSALGKAYFSPG 1640
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
SG I+LD ++C G E L C GW + +CGH+EDA VIC+
Sbjct: 1641 SGDILLDNLQCAGVERHLGQCAHSGWSEHNCGHHEDAGVICS 1682
Score = 123 bits (308), Expect = 5e-28
Identities = 56/110 (50%), Positives = 68/110 (61%)
Frame = +2
Query: 200 GTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKAL 379
G G ++RL GG GRVE+ + G WGTVCD LWDL +A VVC LG AL
Sbjct: 2071 GAGGSDGPELRLVGGSGRFSGRVEVLHQGAWGTVCDDLWDLNEAEVVCWQLGCGRAVSAL 2130
Query: 380 GGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G A FG GSG I+LD ++C G+E L C S GW +CGH+EDA VIC+
Sbjct: 2131 GKAHFGLGSGDILLDNIQCSGSESHLGQCPSSGWSDHNCGHHEDAGVICS 2180
Score = 120 bits (301), Expect = 3e-27
Identities = 55/106 (51%), Positives = 65/106 (61%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
D +RL GG + EGRVE+ WGTVCD W++ +A VVCR LG ALG FG
Sbjct: 2666 DPPLRLVGGRSRCEGRVEVRRQDVWGTVCDDHWNIKNARVVCRVLGCGRALSALGRGRFG 2725
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKE 535
PGSGPI+LD V C GTE +L C GW Q DC H EDA V+C +
Sbjct: 2726 PGSGPILLDNVRCAGTEDALGHCAHSGWAQHDCSHEEDAGVVCAAQ 2771
Score = 117 bits (292), Expect = 3e-26
Identities = 55/103 (53%), Positives = 64/103 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G EGRVE+FYSG WGTVCD WDL DA VVCR LG A + F G+
Sbjct: 2211 LRLGNGSHRCEGRVEVFYSGTWGTVCDDSWDLVDAGVVCRQLGCGEALSAPAQSYFDRGT 2270
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKE 535
G I LD+V+C G E L C GW +CGH+EDASVIC+ E
Sbjct: 2271 GHITLDDVKCTGNETKLWQCPHNGWFSHNCGHHEDASVICSDE 2313
Score = 115 bits (288), Expect = 1e-25
Identities = 55/104 (52%), Positives = 65/104 (62%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
D +RLA G EGRVE+ ++G WGTVCD WDL DA VVCR L A A FG
Sbjct: 2436 DVALRLANGSHPCEGRVELHFNGSWGTVCDDGWDLRDAEVVCRQLACGGAVAAPERARFG 2495
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G GPI LD+V+C GTE L C GW +CGH+EDASV+C+
Sbjct: 2496 RGLGPIALDDVDCVGTEARLWQCLHGGWFSHNCGHHEDASVVCS 2539
Score = 115 bits (287), Expect = 1e-25
Identities = 56/120 (46%), Positives = 70/120 (58%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
++L G GR+E+++ G W TVCD WD ++A VVCR LG A G A FG GS
Sbjct: 61 VQLVEGFGRCSGRIEVYFEGAWCTVCDDQWDESEAQVVCRQLGCGAAVSAPGEARFGQGS 120
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDLSGELPEAL 586
GPI+LDEV+C G E SLA C GW +C H EDA VIC+ HT LP++L
Sbjct: 121 GPILLDEVQCSGAEASLAQCSHAGWFTHNCEHREDAGVICSGAHPAPHT-----HLPQSL 175
Score = 107 bits (266), Expect = 3e-23
Identities = 50/103 (48%), Positives = 60/103 (58%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
++L G GRVE+FY GQWG VCD WD+ DA VVCR L +A G A FG G
Sbjct: 254 LQLVSGSGRCSGRVEVFYHGQWGRVCDDHWDMKDAQVVCRQLSCGRALEAPGEAHFGDGE 313
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKE 535
G +LD+V+C G E L C W +CG EDASVIC+ E
Sbjct: 314 GEFLLDDVDCTGGERFLGQCPHADWSLHNCGPGEDASVICSGE 356
Score = 106 bits (265), Expect = 4e-23
Identities = 52/100 (52%), Positives = 61/100 (61%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ G WGTVCD LWDL +A+VVCR L A GA FG GS
Sbjct: 1173 VRLVDGTGRCSGRVEVLVQGTWGTVCDDLWDLAEATVVCRQLQCGQAVAAPTGAHFGAGS 1232
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
G I+LD+V+C G+E L C G +CGH EDASVIC
Sbjct: 1233 GKIVLDDVQCVGSESHLGQCMPRGGAGHNCGHLEDASVIC 1272
Score = 105 bits (262), Expect = 1e-22
Identities = 52/100 (52%), Positives = 61/100 (61%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ G WGTVCD LWDL +A+VVCR L A GA FG GS
Sbjct: 1326 VRLVDGTGRCSGRVEVLVQGTWGTVCDDLWDLAEATVVCRQLQCGQAVAAPTGAHFGAGS 1385
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
G I+LD+V+C G+E L C G +CGH EDASVIC
Sbjct: 1386 GKIVLDDVQCVGSESHLGQCVPRGRAGHNCGHLEDASVIC 1425
Score = 105 bits (261), Expect = 1e-22
Identities = 53/108 (49%), Positives = 60/108 (55%)
Frame = +2
Query: 206 QGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGG 385
Q K G +RL G GRVE+ Y G WG+VCD W L +A VVCR LG A G
Sbjct: 452 QEAKPG-LRLVDGPGRCSGRVEVSYQGTWGSVCDDGWGLEEAQVVCRQLGCGPAVSAPPG 510
Query: 386 AAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
A FGPG G I+LD V C G E LA C W +CGH EDA IC+
Sbjct: 511 AHFGPGLGKILLDSVHCSGEESHLALCAHDAWFTHNCGHEEDAGAICS 558
Score = 63.5 bits (153), Expect = 4e-10
Identities = 64/240 (26%), Positives = 86/240 (35%), Gaps = 49/240 (20%)
Frame = +2
Query: 284 GQWGT-----VCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECEGTE 448
GQWG+ +C +W VC LG A FG GSGPI LD+ C G+E
Sbjct: 2586 GQWGSRFGEKIC--VW-----KAVCWQLGCGMALAAPRSRPFGAGSGPICLDDGWCSGSE 2638
Query: 449 LSLADCRSLGWMQSDCGHNEDASVICTK------------ETR-GVHTLDLSGELPEALE 589
SL C LG +CGH+ED ICT E R V D+ G + +
Sbjct: 2639 TSLGQCHHLGLSVRNCGHHEDTRAICTDPPLRLVGGRSRCEGRVEVRRQDVWGTVCDDHW 2698
Query: 590 RIFESQTGCDLF-------------------------IRVKAKEDELGLCAHKLILSANP 694
I ++ C + +R ED LG CAH +
Sbjct: 2699 NIKNARVVCRVLGCGRALSALGRGRFGPGSGPILLDNVRCAGTEDALGHCAH-----SGW 2753
Query: 695 EAHGLWKEPSSRVTMEVDAECVP------VVRDYIRYLYSRRVDVSLASVQCFHQLASAY 856
H E + V C+P + R Y+R L D+ + C Q+ Y
Sbjct: 2754 AQHDCSHEEDAGVVCAAQLTCLPHLFQVVIDRGYLRRLGYSSWDIHMNDELCRPQVTGRY 2813
>ref|NP_001041653.1| deleted in malignant brain tumors 1 protein [Sus scrofa].
Length = 1349
Score = 125 bits (315), Expect = 7e-29
Identities = 58/108 (53%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
Frame = +2
Query: 215 KDGDMRLAGGEADNE---GRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGG 385
+D +RL + GRVEI+ G+WGTVCD WD+ DA VVCR LG N A G
Sbjct: 775 RDASLRLVNSNSSYPSCAGRVEIYQGGRWGTVCDDGWDIQDAQVVCRQLGCGNAVSAPGN 834
Query: 386 AAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
A FGPGSGPI LD+V C GTE +L CR+ GW +CGH+EDA VIC+
Sbjct: 835 AYFGPGSGPITLDDVACSGTESTLWQCRNRGWFSHNCGHSEDAGVICS 882
Score = 116 bits (291), Expect = 4e-26
Identities = 54/105 (51%), Positives = 64/105 (60%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 377 LRLVNGGDRCQGRVEVLYQGSWGTVCDDSWDTNDANVVCRQLGCGWAVSAPGSARFGQGS 436
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETR 541
GPI+LD++ C G E L C GW +CGH+EDA VIC+ R
Sbjct: 437 GPILLDDLRCSGHETYLWSCPHSGWNTHNCGHHEDAGVICSDAQR 481
Score = 116 bits (291), Expect = 4e-26
Identities = 54/105 (51%), Positives = 64/105 (60%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 525 LRLVNGGDRCQGRVEVLYQGSWGTVCDDSWDTNDANVVCRQLGCGWAVSAPGSARFGQGS 584
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETR 541
GPI+LD++ C G E L C GW +CGH+EDA VIC+ R
Sbjct: 585 GPILLDDLRCSGHETYLWSCPHSGWNTHNCGHHEDAGVICSDAQR 629
Score = 116 bits (290), Expect = 6e-26
Identities = 55/105 (52%), Positives = 63/105 (60%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVEI Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 84 LRLVNGGDRCQGRVEILYQGSWGTVCDDSWDTNDANVVCRQLGCGWAISAPGSARFGQGS 143
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETR 541
GPI+LD++ C G E L C GW +CGH EDA VIC+ R
Sbjct: 144 GPILLDDLRCSGHETYLWSCPHSGWKTHNCGHQEDAGVICSGAQR 188
Score = 114 bits (285), Expect = 2e-25
Identities = 54/105 (51%), Positives = 62/105 (59%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVEI Y G WGTVCD WD DA+VVCR LG A G A FG G
Sbjct: 229 LRLVNGGDRCQGRVEILYQGSWGTVCDDSWDTNDANVVCRQLGCGWAVSAPGSARFGQGL 288
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETR 541
GPI+LD++ C G E L C GW +CGH EDA VIC+ R
Sbjct: 289 GPILLDDLRCSGHETYLWSCPHSGWKTHNCGHQEDAGVICSGAQR 333
>ref|XP_003359439.1| PREDICTED: deleted in malignant brain tumors 1 protein-like,
partial [Sus scrofa].
Length = 973
Score = 125 bits (313), Expect = 1e-28
Identities = 58/111 (52%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Frame = +2
Query: 200 GTQGVKDG-DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKA 376
G G +DG ++RL GG GRVE+ + G WGTVCD LWDL +A VVC LG A
Sbjct: 68 GAGGSEDGPELRLVGGSGRFSGRVEVLHQGAWGTVCDDLWDLNEAEVVCWPLGCGRAVSA 127
Query: 377 LGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
LG A FG GSG I+LD ++C G+E L C S GW +CGH+EDA VIC+
Sbjct: 128 LGKAHFGLGSGDILLDNIQCSGSESHLGQCPSSGWSDHNCGHHEDAGVICS 178
Score = 118 bits (295), Expect = 1e-26
Identities = 58/112 (51%), Positives = 67/112 (59%)
Frame = +2
Query: 200 GTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKAL 379
GT G +RL G EGRVE+FYSG WGTVCD WDL DA VVCR LG A
Sbjct: 420 GTAG-SGASLRLGNGSHRCEGRVEVFYSGTWGTVCDDSWDLVDAGVVCRQLGCGEALSAP 478
Query: 380 GGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKE 535
+ F G+G I LD+V+C G E L C GW +CGH+EDASVIC+ E
Sbjct: 479 AQSYFDRGTGHITLDDVKCTGNETKLWQCPHNGWFSHNCGHHEDASVICSDE 530
Score = 115 bits (288), Expect = 1e-25
Identities = 55/104 (52%), Positives = 65/104 (62%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
D +RLA G EGRVE+ ++G WGTVCD WDL DA VVCR L A A FG
Sbjct: 653 DVALRLANGSHPCEGRVELHFNGSWGTVCDDGWDLRDAEVVCRQLACGGAVAAPERARFG 712
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G GPI LD+V+C GTE L C GW +CGH+EDASV+C+
Sbjct: 713 RGLGPIALDDVDCVGTEARLWQCLHGGWFSHNCGHHEDASVVCS 756
Score = 75.5 bits (184), Expect = 1e-13
Identities = 38/79 (48%), Positives = 44/79 (55%)
Frame = +2
Query: 293 GTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECEGTELSLADCRS 472
GTV D+LW L+ A VC LG A FG GSGPI LD+ C G+E SL C
Sbjct: 818 GTVRDNLWGLSAAQAVCWQLGCGMALAAPRSRPFGAGSGPICLDDGWCSGSETSLGQCHH 877
Query: 473 LGWMQSDCGHNEDASVICT 529
LG +CGH+ED ICT
Sbjct: 878 LGLSVRNCGHHEDTRAICT 896
>ref|XP_001926649.3| PREDICTED: putative scavenger receptor cysteine-rich
domain-containing protein LOC619207-like [Sus scrofa].
Length = 1355
Score = 123 bits (308), Expect = 5e-28
Identities = 61/118 (51%), Positives = 74/118 (62%)
Frame = +2
Query: 215 KDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAF 394
++G +R+ GGE GRVE++++G GTVCD WDL DA VVCR LG AL GAAF
Sbjct: 764 EEGALRVRGGEDRCSGRVELWHAGSXGTVCDDSWDLADAEVVCRQLGCGRAVGALVGAAF 823
Query: 395 GPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDLSG 568
GPGSGP+ LDEV C G+E SL C + W DCGH EDA V C+ + LSG
Sbjct: 824 GPGSGPVWLDEVGCRGSEASLWGCPAEPWGLGDCGHKEDAGVRCSGDWGTTVLPSLSG 881
Score = 109 bits (273), Expect = 5e-24
Identities = 53/101 (52%), Positives = 62/101 (61%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RLA G GRVE+ + G WGTVCD WDL DA VVC LG + A G A FG G+
Sbjct: 538 VRLASGPGRCAGRVEVLHQGVWGTVCDDGWDLRDAHVVCEQLGCGHALSAPGAAHFGAGA 597
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G I +DE+ CEG E +L C S GW DCGH EDA V C+
Sbjct: 598 GRIWMDELGCEGHESALWRCPSGGWGLHDCGHKEDAGVFCS 638
Score = 76.6 bits (187), Expect = 5e-14
Identities = 43/106 (40%), Positives = 54/106 (50%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
+ RLAGGE GR+E+ WGT+CD+ DL A VVCR L A FG G
Sbjct: 222 EARLAGGEHPCAGRLEVRRGLTWGTICDADLDLATAHVVCRELQCGMAVSTPQDAHFGQG 281
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETR 541
SGP+ + C G E L C Q CGH++DA + C+ E R
Sbjct: 282 SGPVWTEAFRCTGNESLLFHCPRRPGHQ--CGHSQDAGLRCSGEAR 325
Score = 73.2 bits (178), Expect = 5e-13
Identities = 45/130 (34%), Positives = 59/130 (45%)
Frame = +2
Query: 230 RLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSG 409
RL G + EGRVE+ G+W VC + WDLTDA+V+C+ L N G FG G
Sbjct: 328 RLVNGSSACEGRVELQVQGRWAPVCAAHWDLTDATVLCQQLNCGNAVATRPGGHFGDGDA 387
Query: 410 PIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDLSGELPEALE 589
I D C GTE L +C C A+ +C+ LP AL
Sbjct: 388 GIWPDAFHCVGTEPYLWNCPVSTLGAPACARGNAATAVCS-------------GLPHAL- 433
Query: 590 RIFESQTGCD 619
R+ + Q+ CD
Sbjct: 434 RLRDGQSRCD 443
Score = 72.4 bits (176), Expect = 9e-13
Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
D+RLA + +G V + + G+WG VC+ W L +ASVVCR LG +A+G + P
Sbjct: 18 DLRLAYRHSPCDGVVLVRHEGEWGHVCNQEWTLKEASVVCRQLG---CGQAVGAPKYVPL 74
Query: 404 SGPIM---LDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKET 538
SG ++ L V C G E SL C W QS C H +C+ T
Sbjct: 75 SGEVVRPWLHNVSCRGDEASLWGCSLGAWTQSQCPHEWVVVALCSNGT 122
Score = 71.2 bits (173), Expect = 2e-12
Identities = 41/106 (38%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G++ +GRVE+ G WG V D WDL A VVCR LG +A A G G+
Sbjct: 433 LRLRDGQSRCDGRVEVSLDGVWGRVLDDAWDLRGAGVVCRQLGCGEAERAYEAPAPGRGA 492
Query: 407 GPIMLDEVECEGTELSLADCR-SLGWMQSDCGHNEDASVICTKETR 541
P+ L C GTE L C SL + + + DA V+C R
Sbjct: 493 VPLGLSRARCLGTETRLTQCNVSLSPLVPE-EESRDAGVVCAGSLR 537
Score = 56.2 bits (134), Expect = 7e-08
Identities = 28/82 (34%), Positives = 41/82 (50%)
Frame = +2
Query: 203 TQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALG 382
T+ + + L G + EG +E+ G W +C + WDLTDA+V+C+ L N+
Sbjct: 1271 TEAFRCTEFWLVSGSSACEGCIELQVQGCWVPLCAAHWDLTDATVLCQQLNCGNMVATTA 1330
Query: 383 GAAFGPGSGPIMLDEVECEGTE 448
G FG G I + C GTE
Sbjct: 1331 GGHFGDGDAGIWPNMFHCVGTE 1352
Score = 52.0 bits (123), Expect = 1e-06
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GG G +++FY+G WG VC + T S++C LG L
Sbjct: 643 LRLRGGSGRCAGWLDVFYNGTWGAVCSNALRDTSLSIICEQLGCGG-QGWLENRPVHTSL 701
Query: 407 GPIMLDEVECEG-TELSLADCRSLGWMQSDCGHNEDASVICTKET 538
G +D ++C +L C S W C E+ + C ++T
Sbjct: 702 GTSWVDNIQCRRLRNTTLWQCPSAPWHPRSCARGEEVWLTCAEKT 746
>ref|XP_003355637.1| PREDICTED: antigen WC1.1-like [Sus scrofa].
Length = 906
Score = 123 bits (308), Expect = 5e-28
Identities = 58/103 (56%), Positives = 71/103 (68%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GG++ GRVE+++SG WGTVCD W L +A VVC+ LG + +AL AAFGPGS
Sbjct: 591 LRLRGGDSVCSGRVEVWHSGSWGTVCDDSWSLAEAEVVCQQLGCGHALEALRDAAFGPGS 650
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKE 535
G I LDEV+C G E SL DC + W QSDC H EDA V C+ E
Sbjct: 651 GSIWLDEVQCRGRESSLWDCAAGPWGQSDCKHEEDAGVRCSGE 693
Score = 112 bits (280), Expect = 8e-25
Identities = 58/112 (51%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Frame = +2
Query: 200 GTQGVKDG-DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKA 376
GT D +RL G + GRVEI G WGTVCD WDL DA VVCR LG A
Sbjct: 357 GTANCSDSRQLRLVDGGSYCSGRVEILRQGSWGTVCDDSWDLDDAHVVCRQLGCGEALSA 416
Query: 377 LGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK 532
G A FG GSG I LD+V C G E L C S GW Q +C H EDA VIC++
Sbjct: 417 PGSAHFGAGSGRIWLDDVNCTGKESHLWQCPSRGWGQHNCRHKEDAGVICSE 468
Score = 108 bits (270), Expect = 1e-23
Identities = 53/101 (52%), Positives = 61/101 (60%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G + GRVEI + G WGTVCD WDL D +VVCR LG +A A FG GS
Sbjct: 25 LRLVNGGSRCAGRVEILHQGSWGTVCDDYWDLNDVNVVCRQLGCGEGLEAKVFAHFGAGS 84
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G I LD+V C G E L C S GW Q +C H EDA VIC+
Sbjct: 85 GRIWLDDVNCTGKESHLWKCTSPGWEQHNCNHEEDAGVICS 125
Score = 64.3 bits (155), Expect = 3e-10
Identities = 33/100 (33%), Positives = 51/100 (51%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+R+ + + G +E+FY+G WG VC S + S++C LG + AF GS
Sbjct: 472 LRVVSEDQECAGWLEVFYNGTWGGVCRSPMEDITLSIICGQLGCGDSGTLNSSVAFREGS 531
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
P +D ++C T+ SL +C S W + C E+A V C
Sbjct: 532 RPRWVDLIQCRKTDRSLWECPSDPWNYNSCYPKEEAYVSC 571
Score = 60.5 bits (145), Expect = 4e-09
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = +2
Query: 233 LAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGP 412
+ G + GRVE+ SG W T+C S W + +A+VVCR L + AL G P
Sbjct: 236 MRNGTSQCAGRVEMNISGGWRTLCASHWTMANANVVCRQL---SCGVALSTPKGAEGGDP 292
Query: 413 IMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT-KETRGV 547
+ C G+E L C DC H ASVIC+ +T+G+
Sbjct: 293 MWKARFRCSGSESFLWHCPVTALGVPDCAHGNIASVICSGNQTQGL 338
Score = 50.4 bits (119), Expect = 4e-06
Identities = 29/106 (27%), Positives = 40/106 (37%)
Frame = +2
Query: 221 GDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGP 400
G + L GG GRVE+ W V D + A V+C LG LG
Sbjct: 126 GFVHLVGGNGPCSGRVEVHSEEDWTPVSDGNFTFPTAQVICVELGCGKAVSVLGQRPLRG 185
Query: 401 GSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKET 538
+ +E C+G E L C + C H+ V+C+ T
Sbjct: 186 SDDQVWPEEFRCKGEEPMLWSCPRVPCPGGTCHHSGAVQVVCSAYT 231
>ref|NP_999141.1| scavenger receptor cysteine-rich type 1 protein M130 [Sus scrofa].
Length = 1110
Score = 122 bits (306), Expect = 8e-28
Identities = 58/114 (50%), Positives = 74/114 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G + GRVEI+Y G WGTVCD WDL DA VVCR LG + +A AFG G+
Sbjct: 923 IRLQEGNTNCSGRVEIWYGGSWGTVCDDSWDLEDAQVVCRQLGCGSALEAGKEPAFGQGT 982
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDLSG 568
GPI L+EV+C+G E SL DC + W SDCGH EDA+V C++ + +L +G
Sbjct: 983 GPIWLNEVKCKGNEPSLWDCPARSWGHSDCGHKEDAAVTCSEIAKSRESLHATG 1036
Score = 110 bits (276), Expect = 2e-24
Identities = 53/112 (47%), Positives = 68/112 (60%)
Frame = +2
Query: 194 VTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
VT + G KD ++RL GGE GRVE+ +WGTVC++ WD+ SVVCR LG K
Sbjct: 35 VTSSLGGKDKELRLTGGENKCSGRVEVKVQEEWGTVCNNGWDMDVVSVVCRQLGCPTAIK 94
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
A G A F GSG I +D V C G E +L DC+ GW + +C H +DA V C+
Sbjct: 95 ATGWANFSAGSGRIWMDHVSCRGNESALWDCKHDGWGKHNCTHQQDAGVTCS 146
Score = 110 bits (274), Expect = 4e-24
Identities = 50/112 (44%), Positives = 64/112 (57%)
Frame = +2
Query: 197 TGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKA 376
+G + G +RL G GRVE++ WGT+CD WDL DA VVC+ L A
Sbjct: 703 SGVACIGSGQLRLVDGGGRCAGRVEVYPGASWGTICDDSWDLNDAHVVCKQLSCGWAINA 762
Query: 377 LGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK 532
G A FG G+GPI LDE+ C G E + C S GW + +C H EDA VIC++
Sbjct: 763 TGSAHFGEGTGPIWLDEINCNGKESHIWQCHSHGWGRHNCRHKEDAGVICSE 814
Score = 95.9 bits (237), Expect = 8e-20
Identities = 48/111 (43%), Positives = 66/111 (59%)
Frame = +2
Query: 194 VTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
VT + G D +MRL G GR+E+ + +WGTVCD +++ ASVVC+ L +
Sbjct: 143 VTCSDG-SDLEMRLVNGGNRCLGRIEVKFQERWGTVCDDNFNINHASVVCKQLECGSAVS 201
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
G A FG GSGPI D++ C G E +L +C+ GW + +C H EDA VIC
Sbjct: 202 FSGSANFGEGSGPIWFDDLVCNGNESALWNCKHEGWGKHNCDHAEDAGVIC 252
Score = 94.4 bits (233), Expect = 2e-19
Identities = 43/104 (41%), Positives = 58/104 (55%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
D +R+ G + GR+E+ + G+WGT+CD WD DA+V C+ LG A+G
Sbjct: 257 DLKLRVVDGLTECSGRLEVKFQGEWGTICDDGWDSDDAAVACKQLGCPTAVTAIGRVNAS 316
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G+G I LD V C G E +L CR W + C HNEDA V C+
Sbjct: 317 EGTGHIWLDSVSCHGHESALWQCRHHEWGKHYCNHNEDAGVTCS 360
Score = 91.7 bits (226), Expect = 1e-18
Identities = 46/104 (44%), Positives = 59/104 (56%)
Frame = +2
Query: 230 RLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSG 409
RL GG+ GRVE+ + WGTVCDS + L ASV+CR L V LGGA FG GSG
Sbjct: 473 RLVGGDIPCSGRVEVQHGDTWGTVCDSDFSLEAASVLCRELQCGTVVSLLGGAHFGEGSG 532
Query: 410 PIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETR 541
I +E +CEG E L+ C C H+ D V+C++ T+
Sbjct: 533 QIWAEEFQCEGHESHLSLCPVAPRPDGTCSHSRDVGVVCSRYTQ 576
Score = 78.2 bits (191), Expect = 2e-14
Identities = 40/101 (39%), Positives = 53/101 (52%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G+ EGRVE+ G WG++C+S WD+ DA V+C+ L GGA FG GS
Sbjct: 577 IRLVNGKTPCEGRVELNILGSWGSLCNSHWDMEDAHVLCQQLKCGVALSIPGGAPFGKGS 636
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
+ C GTE + DC S C + ASVIC+
Sbjct: 637 EQVWRHMFHCTGTEKHMGDCSVTALGASLCSSGQVASVICS 677
Score = 62.8 bits (151), Expect = 7e-10
Identities = 38/112 (33%), Positives = 52/112 (46%)
Frame = +2
Query: 194 VTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
VT + G D ++RL GG + G VE+ G VCD W L +A VVCR LG + K
Sbjct: 357 VTCSDG-SDLELRLKGGGSHCAGTVEVEIQKLVGKVCDRSWGLKEADVVCRQLGCGSALK 415
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
+ L C G E SL DC++ W C H ++A + C+
Sbjct: 416 TSYQVYSKTKATNTWLFVSSCNGNETSLWDCKNWQWGGLSCDHYDEAKITCS 467
>ref|NP_001116565.1| scavenger receptor cysteine-rich type 1 protein M160 [Sus scrofa].
Length = 804
Score = 120 bits (302), Expect = 2e-27
Identities = 56/101 (55%), Positives = 70/101 (69%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GG++ GRVE+++SG WGTVCD W L +A VVC+ LG + +AL AAFGPG+
Sbjct: 490 LRLRGGDSVCSGRVEVWHSGSWGTVCDDSWSLAEAEVVCQQLGCGHALEALRDAAFGPGN 549
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G I LDEV+C G E SL DC + W QSDC H EDA V C+
Sbjct: 550 GSIWLDEVQCRGRESSLWDCAAGPWGQSDCKHEEDAGVRCS 590
Score = 72.4 bits (176), Expect = 9e-13
Identities = 42/105 (40%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
++RL G EGRVE+ + G+WGTV + W L A+VVCR L A + FG G
Sbjct: 26 ELRLKDGRHRCEGRVELKHQGKWGTVNRAYWGLPRATVVCRQLECGTAVDAPVASYFGRG 85
Query: 404 SGPIMLDEVECEGTELSLADCRS---LGWMQSDCGHNEDASVICT 529
GPI L CEGTE +L DCR + H+ DA +C+
Sbjct: 86 DGPIWL-YAFCEGTESTLTDCRHPNITDYRTKGFSHDWDAGAVCS 129
Score = 65.1 bits (157), Expect = 1e-10
Identities = 51/174 (29%), Positives = 76/174 (43%), Gaps = 3/174 (1%)
Frame = +2
Query: 233 LAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGP 412
+ G + GRVE+ SG W T+C S W + +A+VVC LG GA G
Sbjct: 240 MRNGTSQCAGRVEMNISGGWRTLCASHWTMANANVVCHQLGCGVALSTPKGA---EGGDQ 296
Query: 413 IMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT-KETRGVHTLDLSGELPEALE 589
+ C G E L +C DC H ASVIC+ +T+ + + S P
Sbjct: 297 MWKARFHCSGAESFLWNCPVTALGVPDCAHGNTASVICSGNQTQVLPQCNDSLSEPAGSA 356
Query: 590 RIFESQTGC--DLFIRVKAKEDELGLCAHKLILSANPEAHGLWKEPSSRVTMEV 745
ES T C L +R+ +++ E CA L + N G+ + P +T+ +
Sbjct: 357 ASEESTTNCSESLALRMVSEDQE---CAGWLEVFYNGTWGGVCRSPMEDITLSM 407
Score = 63.5 bits (153), Expect = 4e-10
Identities = 32/100 (32%), Positives = 49/100 (49%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+R+ + + G +E+FY+G WG VC S + S++CR LG + + GS
Sbjct: 371 LRMVSEDQECAGWLEVFYNGTWGGVCRSPMEDITLSMICRQLGCGDSGTLNSSVSLREGS 430
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
P +D ++C T+ S C S W S C E+A V C
Sbjct: 431 RPRWVDGIQCGKTDTSFWQCPSDPWKNSSCSLTEEAYVSC 470
Score = 49.7 bits (117), Expect = 6e-06
Identities = 29/106 (27%), Positives = 41/106 (38%)
Frame = +2
Query: 212 VKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAA 391
V G +RL G+ GRVE+ W V D + A V+C LG LG
Sbjct: 127 VCSGFVRLVVGDRPCSGRVEVHSGEDWTPVSDGNFTFPTAHVICAELGCGKAVSVLGQRP 186
Query: 392 FGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
+ +E C+G E L C + C H+ V+C+
Sbjct: 187 LREPGNQVWPEEFRCKGDEPELWSCPRVPCPGGTCHHSGAVQVVCS 232
>ref|XP_003124464.2| PREDICTED: LOW QUALITY PROTEIN: scavenger receptor cysteine-rich
domain-containing group B protein-like [Sus scrofa].
Length = 583
Score = 120 bits (301), Expect = 3e-27
Identities = 55/107 (51%), Positives = 65/107 (60%)
Frame = +2
Query: 209 GVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGA 388
G K G +RL GG GRVE+ Y+G WGTVCD WD DA V CR G A G
Sbjct: 349 GKKSGRLRLVGGPGPCRGRVEVLYAGGWGTVCDDDWDFADARVACREAGCGPALGATGLG 408
Query: 389 AFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
FG G GP++LD V C GTE L+DC LGW Q +CGH+EDA +C+
Sbjct: 409 HFGYGRGPVLLDNVGCAGTEARLSDCFHLGWGQHNCGHHEDAGALCS 455
Score = 117 bits (292), Expect = 3e-26
Identities = 63/144 (43%), Positives = 76/144 (52%)
Frame = +2
Query: 134 DQVLPGKAMAPXXXXXXXXXVTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSL 313
D+ LP + T G +G +RL GG +GR+EI + G WGTVCD
Sbjct: 169 DEFLPTQPPTRKALTSRAPPTTPQNGNGEGSVRLVGGVGPCQGRMEILHGGLWGTVCDDD 228
Query: 314 WDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSD 493
W L DA+VVCR LG A A FG G+G I+LD V CEG E LA C SLGW +
Sbjct: 229 WGLPDAAVVCRQLGCGAALAATTNAFFGYGTGHILLDNVHCEGGEPRLAACLSLGWGVHN 288
Query: 494 CGHNEDASVICTKETRGVHTLDLS 565
CGH+EDA +C R T LS
Sbjct: 289 CGHHEDAGALCAVLGRPTLTAPLS 312
Score = 115 bits (288), Expect = 1e-25
Identities = 54/104 (51%), Positives = 66/104 (63%)
Frame = +2
Query: 215 KDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAF 394
+DG +RLA G EGRVE+F +WGTVCD WDL A V+CR LG A G A F
Sbjct: 477 RDGHLRLANGAHRCEGRVELFLGQRWGTVCDDAWDLRAAGVLCRQLGCGQALAAPGEAHF 536
Query: 395 GPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GPG GPI+LD V+C G E +L C + W +C H+EDASV+C
Sbjct: 537 GPGRGPILLDNVKCRGDESALLLCSHIRWDAHNCDHSEDASVLC 580
Score = 107 bits (267), Expect = 3e-23
Identities = 48/101 (47%), Positives = 65/101 (64%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
++RL GG + GR+E+ + G WG+VCD WD+ DA+VVCR LG AFG G
Sbjct: 68 ELRLVGGPSRCRGRLEVLHGGSWGSVCDDDWDVVDANVVCRQLGCGLALPVPRPLAFGQG 127
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GPI+LD VEC G E++L++C S GW +C H ED +V+C
Sbjct: 128 RGPILLDNVECLGQEVALSECGSRGWGVHNCFHYEDVAVLC 168
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 51,194,466
Number of extensions: 1540096
Number of successful extensions: 8339
Number of sequences better than 1.0e-05: 21
Number of HSP's gapped: 8211
Number of HSP's successfully gapped: 83
Length of query: 710
Length of database: 11,343,932
Length adjustment: 106
Effective length of query: 604
Effective length of database: 8,704,850
Effective search space: 5257729400
Effective search space used: 5257729400
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012726
(2130 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_035280.1| galectin-3-binding protein precursor [Mus muscu... 700 0.0
Alignment gi|NP_032965.1| neurotrypsin precursor [Mus musculus]. 130 3e-30
Alignment gi|NP_001163866.1| scavenger receptor cysteine-rich type 1 prot... 129 7e-30
Alignment gi|NP_444324.2| scavenger receptor cysteine-rich type 1 protein... 129 7e-30
Alignment gi|NP_001121618.1| scavenger receptor protein family member iso... 126 8e-29
Alignment gi|NP_001121617.1| scavenger receptor protein family member iso... 126 8e-29
Alignment gi|NP_780375.2| putative DMBT1-like protein precursor [Mus musc... 124 3e-28
Alignment gi|NP_766497.3| CD163 molecule-like 1 [Mus musculus]. 122 1e-27
Alignment gi|NP_001153838.1| scavenger receptor cysteine-rich domain-cont... 120 4e-27
Alignment gi|NP_031795.2| deleted in malignant brain tumors 1 protein [Mu... 117 3e-26
>ref|NP_035280.1| galectin-3-binding protein precursor [Mus musculus].
Length = 577
Score = 700 bits (1806), Expect = 0.0
Identities = 336/562 (59%), Positives = 420/562 (74%), Gaps = 25/562 (4%)
Frame = +2
Query: 194 VTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
V GTQG +DGDMRL G + NEGRVEIFY G+WGTVCD+LW+L DA VVCRALG+ N T+
Sbjct: 13 VPGTQGTEDGDMRLVNGASANEGRVEIFYRGRWGTVCDNLWNLLDAHVVCRALGYENATQ 72
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHT 553
ALG AAFGPG GPIMLDEVEC GTE SLA CRSLGWM S CGH +DA V+C+ +T G+H
Sbjct: 73 ALGRAAFGPGKGPIMLDEVECTGTESSLASCRSLGWMVSRCGHEKDAGVVCSNDTTGLHI 132
Query: 554 LDLSGELPEALERIFESQTGCDLFIRVKAKE-DELGLCAHKLILSANPEAHGLWKEPSSR 730
LDLSGEL +AL +IF+SQ GCDLFI+V + ++L LCAH LIL NPEA LW+ S
Sbjct: 133 LDLSGELSDALGQIFDSQQGCDLFIQVTGQGYEDLSLCAHTLILRTNPEAQALWQVVGSS 192
Query: 731 VTMEVDAECVPVVRDYIRYLYSRRVDVSLASVQCFHQLASAYGAQQLQSFCAHLFAVLIP 910
V M VDAEC+PVVRD++RY YSRR++VS++SV+C H+LASAYGA +LQ +C LFA L+P
Sbjct: 193 VIMRVDAECMPVVRDFLRYFYSRRIEVSMSSVKCLHKLASAYGATELQDYCGRLFATLLP 252
Query: 911 QDRSFRAPLDLYAYALASRDPVLEEVCVQFLTWNFEALTQAEAWPSVPAALLHSLLARXX 1090
QD +F PLDLYAYA A+ D +LE++CVQFL WNFE LTQ+E+W +VP L+ +LL +
Sbjct: 253 QDPTFHTPLDLYAYARATGDSMLEDLCVQFLAWNFEPLTQSESWSAVPTTLIQALLPKSE 312
Query: 1091 XXXXXXXXXXXXXDVWSRERGASHGEVEGLVEKVRFPMMPPRDLFQLQFNLSLYRSHEAL 1270
D WS E ASH ++E LVE+VRFPMM P++LF+LQFNLSLY+ H+AL
Sbjct: 313 LAVSSELDLLKAVDQWSTETIASHEDIERLVEQVRFPMMLPQELFELQFNLSLYQDHQAL 372
Query: 1271 FQRKTLQALEFHTVPFQLLAQYRGLNLSGDAYRPRLYTSPRWSANQTASA---------- 1420
FQRKT+QALEFHTVP ++LA+Y+GLNL+ D Y+PRLYTS WS+ AS
Sbjct: 373 FQRKTMQALEFHTVPVEVLAKYKGLNLTEDTYKPRLYTSSTWSSLVMASTWRAQRYEYNR 432
Query: 1421 --------------YSPYESFQTPKHPSFLFQDSSVSWSFVYLPTVQSCWNYGFSCSPDE 1558
Y+ Y+SFQTP+HPSFLF+D +SWS YLPT+QSCWNYGFSC+ +E
Sbjct: 433 YNQLYTYGYGSVARYNSYQSFQTPQHPSFLFKDKQISWSATYLPTMQSCWNYGFSCTSNE 492
Query: 1559 PPLLGLSKTSSLDPTIGYENKALMLCEGSFVADIAAFKDTKALIPSALGTNSSRSAAFFP 1738
P+LGL+ +S +PTIGYEN+ L+LC G V D+ +F+ +KA IP+AL TNSS++ + FP
Sbjct: 493 LPVLGLTTSSYSNPTIGYENRVLILCGGYSVVDVTSFEGSKAPIPTALDTNSSKTPSLFP 552
Query: 1739 CPAGFFSSFQAVIRPFYLTNSS 1804
C +G FSSF+ VIRPFYLTNS+
Sbjct: 553 CASGAFSSFRVVIRPFYLTNST 574
>ref|NP_032965.1| neurotrypsin precursor [Mus musculus].
Length = 761
Score = 130 bits (328), Expect = 3e-30
Identities = 65/134 (48%), Positives = 81/134 (60%), Gaps = 3/134 (2%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GG + +EGRVE++++GQWGT+CD WD DA V+CR LG + KA A FG GS
Sbjct: 166 IRLVGGNSGHEGRVELYHAGQWGTICDDQWDNADADVICRQLGLSGIAKAWHQAHFGEGS 225
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDLSGELPEA- 583
GPI+LDEV C G ELS+ C W + +CGH EDA V C T GV L E
Sbjct: 226 GPILLDEVRCTGNELSIEQCPKSSWGEHNCGHKEDAGVSCVPLTDGVIRLAGGKSTHEGR 285
Query: 584 LERIFESQTG--CD 619
LE ++ Q G CD
Sbjct: 286 LEVYYKGQWGTVCD 299
Score = 106 bits (264), Expect = 8e-23
Identities = 49/100 (49%), Positives = 64/100 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GE EGRVE+F +GQWGT+CD W A+V+CR LG++ +A A FG G
Sbjct: 386 IRLVDGENKKEGRVEVFVNGQWGTICDDGWTDKHAAVICRQLGYKGPARARTMAYFGEGK 445
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GPI +D V+C G E +LADC + +C H+EDA VIC
Sbjct: 446 GPIHMDNVKCTGNEKALADCVKQDIGRHNCRHSEDAGVIC 485
Score = 100 bits (249), Expect = 5e-21
Identities = 47/109 (43%), Positives = 63/109 (57%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
DG +RLAGG++ +EGR+E++Y GQWGTVCD W + V CR LGF+ K F
Sbjct: 270 DGVIRLAGGKSTHEGRLEVYYKGQWGTVCDDGWTEMNTYVACRLLGFK-YGKQSSVNHFD 328
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRG 544
+ PI LD+V C G E+S C W + DC H ED + C ++ G
Sbjct: 329 GSNRPIWLDDVSCSGKEVSFIQCSRRQWGRHDCSHREDVGLTCYPDSDG 377
>ref|NP_001163866.1| scavenger receptor cysteine-rich type 1 protein M130 isoform 1
precursor [Mus musculus].
Length = 1159
Score = 129 bits (325), Expect = 7e-30
Identities = 59/103 (57%), Positives = 69/103 (66%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
D +RL G D GRVEI++ G WGTVCD WDL DA VVC+ LG KAL AAFG
Sbjct: 927 DNKIRLQEGHTDCSGRVEIWHKGSWGTVCDDSWDLNDAKVVCKQLGCGQAVKALKEAAFG 986
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
PG+GPI L+E++C G E SL DC + W SDCGH EDAS+ C
Sbjct: 987 PGTGPIWLNEIKCRGNESSLWDCPAKPWSHSDCGHKEDASIQC 1029
Score = 114 bits (284), Expect = 4e-25
Identities = 52/107 (48%), Positives = 66/107 (61%)
Frame = +2
Query: 212 VKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAA 391
+ G +RL GG GRVE+++ G WGTVCD WD+TDA+VVC+ L A G A
Sbjct: 714 IASGQLRLVGGGGRCAGRVEVYHEGSWGTVCDDNWDMTDANVVCKQLDCGVAINATGSAY 773
Query: 392 FGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK 532
FG G+G I LDEV C G E + C S GW + +C H EDA VIC++
Sbjct: 774 FGEGAGAIWLDEVICTGKESHIWQCHSHGWGRHNCRHKEDAGVICSE 820
Score = 103 bits (256), Expect = 7e-22
Identities = 50/112 (44%), Positives = 67/112 (59%)
Frame = +2
Query: 194 VTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
VT G ++RLAGGE + GRVE+ +WGTVC + W + + SVVC+ LG K
Sbjct: 39 VTNAPGEMKKELRLAGGENNCSGRVELKIHDKWGTVCSNGWSMNEVSVVCQQLGCPTSIK 98
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
ALG A GSG I +D+V C G E +L DC+ GW + +C H +DA V C+
Sbjct: 99 ALGWANSSAGSGYIWMDKVSCTGNESALWDCKHDGWGKHNCTHEKDAGVTCS 150
Score = 101 bits (251), Expect = 3e-21
Identities = 47/104 (45%), Positives = 61/104 (58%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
D +RL G + GR+E+ + G+WGTVCD WDL DASVVC+ LG A+G
Sbjct: 262 DLSLRLVDGVSRCSGRLEVRFQGEWGTVCDDNWDLRDASVVCKQLGCPTAISAIGRVNAS 321
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GSG I LD + CEG E +L +C+ W + C H EDA V C+
Sbjct: 322 EGSGQIWLDNISCEGHEATLWECKHQEWGKHYCHHREDAGVTCS 365
Score = 95.9 bits (237), Expect = 1e-19
Identities = 48/111 (43%), Positives = 63/111 (56%)
Frame = +2
Query: 260 GRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECE 439
GRVEI + G+WGTVCD + ASV+C+ LG + G A G GSGPI LD++ C
Sbjct: 169 GRVEIKFQGKWGTVCDDNFSKDHASVICKQLGCGSAISFSGSAKLGAGSGPIWLDDLACN 228
Query: 440 GTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDLSGELPEALER 592
G E +L DC+ GW + +C H ED VIC + DLS L + + R
Sbjct: 229 GNESALWDCKHRGWGKHNCDHAEDVGVIC------LEGADLSLRLVDGVSR 273
Score = 86.3 bits (212), Expect = 9e-17
Identities = 45/101 (44%), Positives = 56/101 (55%)
Frame = +2
Query: 230 RLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSG 409
RL GGE GRVE+ + WG+VCD L ASVVCR L V LGGA FG GSG
Sbjct: 478 RLVGGEIPCSGRVEVKHGDVWGSVCDFDLSLEAASVVCRELQCGTVVSILGGAHFGEGSG 537
Query: 410 PIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK 532
I +E +C G E L+ C + C H+ D SV+C++
Sbjct: 538 QIWGEEFQCSGDESHLSLCSVAPPLDRTCTHSRDVSVVCSR 578
Score = 82.4 bits (202), Expect = 1e-15
Identities = 42/102 (41%), Positives = 54/102 (52%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
D+RLAGGE+ EGRVE+ G WG +C S WD+ DA V+C+ L GA FG G
Sbjct: 581 DIRLAGGESSCEGRVELKTLGAWGPLCSSHWDMEDAHVLCQQLKCGVAQSIPEGAHFGKG 640
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
+G + C GTE + DC C + ASVIC+
Sbjct: 641 AGQVWSHMFHCTGTEEHIGDCLMTALGAPTCSEGQVASVICS 682
Score = 56.6 bits (135), Expect = 8e-08
Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 2/130 (1%)
Frame = +2
Query: 194 VTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
VT + G D ++RL GG + G VE+ G +C W L DA VVCR LG + +
Sbjct: 362 VTCSDGA-DLELRLVGGGSRCAGIVEVEIQKLTGKMCSRGWTLADADVVCRQLGCGSALQ 420
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT--KETRGV 547
G+ L C G E + C++ W C + E+A V C+ +E R V
Sbjct: 421 TQAKIYSKTGATNTWLFPGSCNGNETTFWQCKNWQWGGLSCDNFEEAKVTCSGHREPRLV 480
Query: 548 HTLDLSGELP 577
GE+P
Sbjct: 481 -----GGEIP 485
Score = 50.1 bits (118), Expect = 7e-06
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +2
Query: 260 GRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECE 439
GR+E+FY+G WG++ S T VVCR LG + + S P+ +D V+C
Sbjct: 837 GRLEVFYNGTWGSIGSSNMSPTTVGVVCRQLGCADNGTVKPIPSDKTPSRPMWVDRVQCP 896
Query: 440 GTELSLADCRSLGWMQSDCG-HNEDASVICTKETR 541
+L C S W Q ++++ +IC + R
Sbjct: 897 KGVDTLWQCPSSPWKQRQASPSSQESWIICDNKIR 931
>ref|NP_444324.2| scavenger receptor cysteine-rich type 1 protein M130 isoform 2
precursor [Mus musculus].
Length = 1121
Score = 129 bits (325), Expect = 7e-30
Identities = 59/103 (57%), Positives = 69/103 (66%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
D +RL G D GRVEI++ G WGTVCD WDL DA VVC+ LG KAL AAFG
Sbjct: 927 DNKIRLQEGHTDCSGRVEIWHKGSWGTVCDDSWDLNDAKVVCKQLGCGQAVKALKEAAFG 986
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
PG+GPI L+E++C G E SL DC + W SDCGH EDAS+ C
Sbjct: 987 PGTGPIWLNEIKCRGNESSLWDCPAKPWSHSDCGHKEDASIQC 1029
Score = 114 bits (284), Expect = 4e-25
Identities = 52/107 (48%), Positives = 66/107 (61%)
Frame = +2
Query: 212 VKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAA 391
+ G +RL GG GRVE+++ G WGTVCD WD+TDA+VVC+ L A G A
Sbjct: 714 IASGQLRLVGGGGRCAGRVEVYHEGSWGTVCDDNWDMTDANVVCKQLDCGVAINATGSAY 773
Query: 392 FGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK 532
FG G+G I LDEV C G E + C S GW + +C H EDA VIC++
Sbjct: 774 FGEGAGAIWLDEVICTGKESHIWQCHSHGWGRHNCRHKEDAGVICSE 820
Score = 103 bits (256), Expect = 7e-22
Identities = 50/112 (44%), Positives = 67/112 (59%)
Frame = +2
Query: 194 VTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
VT G ++RLAGGE + GRVE+ +WGTVC + W + + SVVC+ LG K
Sbjct: 39 VTNAPGEMKKELRLAGGENNCSGRVELKIHDKWGTVCSNGWSMNEVSVVCQQLGCPTSIK 98
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
ALG A GSG I +D+V C G E +L DC+ GW + +C H +DA V C+
Sbjct: 99 ALGWANSSAGSGYIWMDKVSCTGNESALWDCKHDGWGKHNCTHEKDAGVTCS 150
Score = 101 bits (251), Expect = 3e-21
Identities = 47/104 (45%), Positives = 61/104 (58%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
D +RL G + GR+E+ + G+WGTVCD WDL DASVVC+ LG A+G
Sbjct: 262 DLSLRLVDGVSRCSGRLEVRFQGEWGTVCDDNWDLRDASVVCKQLGCPTAISAIGRVNAS 321
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GSG I LD + CEG E +L +C+ W + C H EDA V C+
Sbjct: 322 EGSGQIWLDNISCEGHEATLWECKHQEWGKHYCHHREDAGVTCS 365
Score = 95.9 bits (237), Expect = 1e-19
Identities = 48/111 (43%), Positives = 63/111 (56%)
Frame = +2
Query: 260 GRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECE 439
GRVEI + G+WGTVCD + ASV+C+ LG + G A G GSGPI LD++ C
Sbjct: 169 GRVEIKFQGKWGTVCDDNFSKDHASVICKQLGCGSAISFSGSAKLGAGSGPIWLDDLACN 228
Query: 440 GTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDLSGELPEALER 592
G E +L DC+ GW + +C H ED VIC + DLS L + + R
Sbjct: 229 GNESALWDCKHRGWGKHNCDHAEDVGVIC------LEGADLSLRLVDGVSR 273
Score = 86.3 bits (212), Expect = 9e-17
Identities = 45/101 (44%), Positives = 56/101 (55%)
Frame = +2
Query: 230 RLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSG 409
RL GGE GRVE+ + WG+VCD L ASVVCR L V LGGA FG GSG
Sbjct: 478 RLVGGEIPCSGRVEVKHGDVWGSVCDFDLSLEAASVVCRELQCGTVVSILGGAHFGEGSG 537
Query: 410 PIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK 532
I +E +C G E L+ C + C H+ D SV+C++
Sbjct: 538 QIWGEEFQCSGDESHLSLCSVAPPLDRTCTHSRDVSVVCSR 578
Score = 82.4 bits (202), Expect = 1e-15
Identities = 42/102 (41%), Positives = 54/102 (52%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
D+RLAGGE+ EGRVE+ G WG +C S WD+ DA V+C+ L GA FG G
Sbjct: 581 DIRLAGGESSCEGRVELKTLGAWGPLCSSHWDMEDAHVLCQQLKCGVAQSIPEGAHFGKG 640
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
+G + C GTE + DC C + ASVIC+
Sbjct: 641 AGQVWSHMFHCTGTEEHIGDCLMTALGAPTCSEGQVASVICS 682
Score = 56.6 bits (135), Expect = 8e-08
Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 2/130 (1%)
Frame = +2
Query: 194 VTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
VT + G D ++RL GG + G VE+ G +C W L DA VVCR LG + +
Sbjct: 362 VTCSDGA-DLELRLVGGGSRCAGIVEVEIQKLTGKMCSRGWTLADADVVCRQLGCGSALQ 420
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT--KETRGV 547
G+ L C G E + C++ W C + E+A V C+ +E R V
Sbjct: 421 TQAKIYSKTGATNTWLFPGSCNGNETTFWQCKNWQWGGLSCDNFEEAKVTCSGHREPRLV 480
Query: 548 HTLDLSGELP 577
GE+P
Sbjct: 481 -----GGEIP 485
Score = 50.1 bits (118), Expect = 7e-06
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +2
Query: 260 GRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECE 439
GR+E+FY+G WG++ S T VVCR LG + + S P+ +D V+C
Sbjct: 837 GRLEVFYNGTWGSIGSSNMSPTTVGVVCRQLGCADNGTVKPIPSDKTPSRPMWVDRVQCP 896
Query: 440 GTELSLADCRSLGWMQSDCG-HNEDASVICTKETR 541
+L C S W Q ++++ +IC + R
Sbjct: 897 KGVDTLWQCPSSPWKQRQASPSSQESWIICDNKIR 931
>ref|NP_001121618.1| scavenger receptor protein family member isoform 2 [Mus musculus].
Length = 1112
Score = 126 bits (316), Expect = 8e-29
Identities = 58/104 (55%), Positives = 69/104 (66%)
Frame = +2
Query: 215 KDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAF 394
++G +R+ GGE GRVE+++ G WGTVCD WDL DA VVCR LG AL AAF
Sbjct: 895 EEGALRVLGGENGCSGRVELWHGGSWGTVCDDSWDLADAEVVCRQLGCGPAIAALQNAAF 954
Query: 395 GPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GPGSGP+ LDEV C G+ELSL C++ W DC H EDA V C
Sbjct: 955 GPGSGPVWLDEVGCRGSELSLGACQAEPWGYGDCSHKEDAGVRC 998
Score = 120 bits (300), Expect = 6e-27
Identities = 56/102 (54%), Positives = 68/102 (66%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RLA G+ GRVE+FY G WGTVCD WDL DA VVCR LG + A A FG G+
Sbjct: 667 IRLAAGKNRCAGRVEVFYQGTWGTVCDDAWDLQDAHVVCRQLGCGHALSAPRAAHFGAGT 726
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK 532
G I +DE+ C G E +L +C+S GW Q DCGH EDA VIC++
Sbjct: 727 GRIWMDELGCMGEEAALWECQSGGWGQQDCGHKEDAGVICSE 768
Score = 79.7 bits (195), Expect = 8e-15
Identities = 44/104 (42%), Positives = 55/104 (52%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
+ RL GG EGR+E+ WGTVC DL A VVCR LG LG + FG G
Sbjct: 353 EARLLGGVHPCEGRLEVLRGLTWGTVCHDDLDLPMAHVVCRELGCGTAVSILGSSHFGYG 412
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKE 535
SGP+ + C G E L C L CGH++DA++IC+ E
Sbjct: 413 SGPLWTEAFRCMGNESLLFHC--LREPGHQCGHDQDAALICSGE 454
Score = 78.6 bits (192), Expect = 2e-14
Identities = 43/107 (40%), Positives = 57/107 (53%)
Frame = +2
Query: 209 GVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGA 388
G++D +RL G++ +GRVE+F G WG V DS WDL DA+VVCR LG A
Sbjct: 557 GLQDA-LRLREGQSHCDGRVEVFLDGTWGRVLDSAWDLRDAAVVCRQLGCGEAQLAYDAP 615
Query: 389 AFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
A G + P+ L V C G+E L C + G DA V+C+
Sbjct: 616 APGHKTIPVGLSLVHCLGSETHLTQCNVSASLLVHAGTLRDAGVVCS 662
Score = 67.0 bits (162), Expect = 6e-11
Identities = 43/130 (33%), Positives = 55/130 (42%)
Frame = +2
Query: 230 RLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSG 409
RL G + EGRVE+ W +C + WDL DA+V+C L G FG G
Sbjct: 457 RLVNGSSRCEGRVELLVQDAWQPLCAANWDLADATVLCHQLNCGYAVATPQGGHFGNVEG 516
Query: 410 PIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDLSGELPEALE 589
PI D C GTE L C + C AS +C+ L +AL
Sbjct: 517 PIRTDVFHCVGTEPHLLSCPTSTLGAQACALGNSASALCS-------------GLQDAL- 562
Query: 590 RIFESQTGCD 619
R+ E Q+ CD
Sbjct: 563 RLREGQSHCD 572
Score = 54.3 bits (129), Expect = 4e-07
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 8/139 (5%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
D+RL GR+E+FY+G WG VC SL + V+C LG + + L
Sbjct: 771 DVRLQEHSQPCTGRLEVFYNGTWGGVCQSL-NAASLRVLCEHLGCGSQGQLLARPRGSST 829
Query: 404 SGPIMLDEVEC-EGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDLSGELPE 580
+ L ++C + ++SL C S W + C E+A + C ++T ++
Sbjct: 830 IETVWLKSIQCRDKHDMSLWQCPSEPWNRHSCLRGEEAWLACAEKTEVSQDMEQIANCSS 889
Query: 581 ALE-------RIFESQTGC 616
L R+ + GC
Sbjct: 890 TLSCPEEGALRVLGGENGC 908
>ref|NP_001121617.1| scavenger receptor protein family member isoform 1 [Mus musculus].
Length = 996
Score = 126 bits (316), Expect = 8e-29
Identities = 58/104 (55%), Positives = 69/104 (66%)
Frame = +2
Query: 215 KDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAF 394
++G +R+ GGE GRVE+++ G WGTVCD WDL DA VVCR LG AL AAF
Sbjct: 779 EEGALRVLGGENGCSGRVELWHGGSWGTVCDDSWDLADAEVVCRQLGCGPAIAALQNAAF 838
Query: 395 GPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GPGSGP+ LDEV C G+ELSL C++ W DC H EDA V C
Sbjct: 839 GPGSGPVWLDEVGCRGSELSLGACQAEPWGYGDCSHKEDAGVRC 882
Score = 120 bits (300), Expect = 6e-27
Identities = 56/102 (54%), Positives = 68/102 (66%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RLA G+ GRVE+FY G WGTVCD WDL DA VVCR LG + A A FG G+
Sbjct: 551 IRLAAGKNRCAGRVEVFYQGTWGTVCDDAWDLQDAHVVCRQLGCGHALSAPRAAHFGAGT 610
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK 532
G I +DE+ C G E +L +C+S GW Q DCGH EDA VIC++
Sbjct: 611 GRIWMDELGCMGEEAALWECQSGGWGQQDCGHKEDAGVICSE 652
Score = 80.9 bits (198), Expect = 4e-15
Identities = 49/116 (42%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Frame = +2
Query: 194 VTGTQGVKDG--DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNV 367
+T TQ V G + RL GG EGR+E+ WGTVC DL A VVCR LG
Sbjct: 225 LTYTQVVCTGHVEARLLGGVHPCEGRLEVLRGLTWGTVCHDDLDLPMAHVVCRELGCGTA 284
Query: 368 TKALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKE 535
LG + FG GSGP+ + C G E L C L CGH++DA++IC+ E
Sbjct: 285 VSILGSSHFGYGSGPLWTEAFRCMGNESLLFHC--LREPGHQCGHDQDAALICSGE 338
Score = 78.6 bits (192), Expect = 2e-14
Identities = 43/107 (40%), Positives = 57/107 (53%)
Frame = +2
Query: 209 GVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGA 388
G++D +RL G++ +GRVE+F G WG V DS WDL DA+VVCR LG A
Sbjct: 441 GLQDA-LRLREGQSHCDGRVEVFLDGTWGRVLDSAWDLRDAAVVCRQLGCGEAQLAYDAP 499
Query: 389 AFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
A G + P+ L V C G+E L C + G DA V+C+
Sbjct: 500 APGHKTIPVGLSLVHCLGSETHLTQCNVSASLLVHAGTLRDAGVVCS 546
Score = 67.0 bits (162), Expect = 6e-11
Identities = 43/130 (33%), Positives = 55/130 (42%)
Frame = +2
Query: 230 RLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSG 409
RL G + EGRVE+ W +C + WDL DA+V+C L G FG G
Sbjct: 341 RLVNGSSRCEGRVELLVQDAWQPLCAANWDLADATVLCHQLNCGYAVATPQGGHFGNVEG 400
Query: 410 PIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDLSGELPEALE 589
PI D C GTE L C + C AS +C+ L +AL
Sbjct: 401 PIRTDVFHCVGTEPHLLSCPTSTLGAQACALGNSASALCS-------------GLQDAL- 446
Query: 590 RIFESQTGCD 619
R+ E Q+ CD
Sbjct: 447 RLREGQSHCD 456
Score = 54.3 bits (129), Expect = 4e-07
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 8/139 (5%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
D+RL GR+E+FY+G WG VC SL + V+C LG + + L
Sbjct: 655 DVRLQEHSQPCTGRLEVFYNGTWGGVCQSL-NAASLRVLCEHLGCGSQGQLLARPRGSST 713
Query: 404 SGPIMLDEVEC-EGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDLSGELPE 580
+ L ++C + ++SL C S W + C E+A + C ++T ++
Sbjct: 714 IETVWLKSIQCRDKHDMSLWQCPSEPWNRHSCLRGEEAWLACAEKTEVSQDMEQIANCSS 773
Query: 581 ALE-------RIFESQTGC 616
L R+ + GC
Sbjct: 774 TLSCPEEGALRVLGGENGC 792
>ref|NP_780375.2| putative DMBT1-like protein precursor [Mus musculus].
Length = 841
Score = 124 bits (311), Expect = 3e-28
Identities = 55/101 (54%), Positives = 66/101 (65%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RLAG GRVEI + G WGTVCD LWDL +A VVCR LG + A G A FGPGS
Sbjct: 680 LRLAGSSGQCSGRVEILHQGAWGTVCDDLWDLNEAEVVCRQLGCGHAIAAPGSAYFGPGS 739
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G I+LD ++C GTE C S W+ +CGH+EDA VIC+
Sbjct: 740 GNILLDNIQCSGTENHFGQCSSSAWLDHNCGHHEDAGVICS 780
Score = 123 bits (309), Expect = 5e-28
Identities = 58/110 (52%), Positives = 69/110 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RLAG GRVE+FY G WGTVCD LWDL A+++CR LG AL A FG GS
Sbjct: 144 VRLAGNHGSCAGRVELFYQGVWGTVCDDLWDLPQANIICRQLGCGWAVSALSEAYFGQGS 203
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTL 556
G I+LD V C+G E L +C LGW +C H+EDASVIC+ G TL
Sbjct: 204 GKILLDNVHCKGHEEHLEECSHLGWFSHNCDHSEDASVICSDAEYGTVTL 253
Score = 117 bits (292), Expect = 5e-26
Identities = 52/102 (50%), Positives = 64/102 (62%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
++RL GG + GRVEI Y G WGT+CD LW +A VVCR L +LG A FGPG
Sbjct: 427 ELRLVGGSSRCSGRVEILYQGVWGTICDDLWGSNEAEVVCRQLECGQAVSSLGEAYFGPG 486
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
SG I LD ++C G E L C GW + +CGH+EDA VIC+
Sbjct: 487 SGEIFLDNLQCSGMEHYLGQCPHSGWSEHNCGHHEDAGVICS 528
>ref|NP_766497.3| CD163 molecule-like 1 [Mus musculus].
Length = 989
Score = 122 bits (305), Expect = 1e-27
Identities = 55/100 (55%), Positives = 68/100 (68%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+R+ GGE GRVE++++G WGTVCD WDL DA VVCR LG ALG A+FGPG
Sbjct: 780 LRVLGGEDGCSGRVELWHAGSWGTVCDDSWDLVDAEVVCRQLGCGQALAALGEASFGPGV 839
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GP+ LDEVEC G+E++L C++ W DC H EDA V C
Sbjct: 840 GPVWLDEVECLGSEVTLEACQAEPWGHGDCTHKEDAGVRC 879
Score = 110 bits (276), Expect = 3e-24
Identities = 53/102 (51%), Positives = 62/102 (60%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RLA G GRVE+FY G WGTVCD WDL DA VVCR L + A A FG G+
Sbjct: 546 VRLAAGPGRCAGRVELFYQGSWGTVCDDAWDLQDAQVVCRQLDCGHALSAPRNAHFGAGT 605
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK 532
G I +DE+ C G E SL C+S W Q DC H EDA V C++
Sbjct: 606 GHIWMDELHCLGNESSLWKCQSGSWGQHDCRHKEDAGVFCSE 647
Score = 84.3 bits (207), Expect = 3e-16
Identities = 45/104 (43%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
+ RL GGE GR+E+ WGT+C + DL A VVCR LG LGGA FG G
Sbjct: 234 EARLVGGEHSCAGRLEVLRGLTWGTICHADLDLPTAHVVCRELGCGIAVSTLGGAQFGQG 293
Query: 404 SGPIMLDEVECEGTELSLADC-RSLGWMQSDCGHNEDASVICTK 532
SGP+ L+ C G E L C R G CGH +DA++ C++
Sbjct: 294 SGPVWLEAFRCVGNESLLFHCPREPG---HHCGHEQDAALTCSE 334
Score = 71.2 bits (173), Expect = 3e-12
Identities = 39/102 (38%), Positives = 46/102 (45%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
+ RL G +D EGRVE+ G W VC + WDL DA V+C L N G FG G
Sbjct: 334 EFRLVNGSSDCEGRVELQVQGTWAPVCAANWDLADAMVLCHQLNCGNAVSVPPGGHFGDG 393
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
I D C GTE L C + C AS IC+
Sbjct: 394 DDLIWPDIFHCVGTEPHLLHCAASTLGAHGCVLGNTASTICS 435
Score = 69.7 bits (169), Expect = 9e-12
Identities = 40/105 (38%), Positives = 51/105 (48%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G++ +GRVEI G WG V D WDL ASVVCR LG +A A
Sbjct: 441 LRLRDGQSYCDGRVEISLDGSWGRVLDDAWDLHGASVVCRQLGCGEAQRAYDAPAPIFRR 500
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETR 541
P+ L +V C G+E L C + G DA V+C+ R
Sbjct: 501 VPVGLSQVRCLGSETRLVHCNVSTSLLVPAGTLRDAGVVCSGSLR 545
Score = 68.6 bits (166), Expect = 2e-11
Identities = 42/119 (35%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Frame = +2
Query: 194 VTGTQGVKD-GDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVT 370
+TGT D G++RLA ++ +G V + + G+WG +C+ W L +ASVVCR LG
Sbjct: 20 LTGTSSEGDQGNLRLAHRQSTCDGVVLVRHQGEWGHLCNLEWTLAEASVVCRQLG---CG 76
Query: 371 KALGGAAFGPGSGPIM---LDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKET 538
A+G + P G ++ L V C G E SL +C W Q C H +C T
Sbjct: 77 PAVGAPKYVPLPGEMVRPWLHNVSCWGNESSLWECSLGAWSQRACPHEWVVVALCANGT 135
Score = 53.1 bits (126), Expect = 8e-07
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GG + G +++ Y+G WG VC + S++CR LG + + G G
Sbjct: 651 LRLRGGTSGCVGWLDVLYNGSWGAVCSNALRDISLSIICRQLGCGDQGWLENRPSSGAGL 710
Query: 407 GPIMLDEVECEGT-ELSLADCRSLGWMQSDCGHNEDASVIC 526
G +D ++C +L C S W C E+ + C
Sbjct: 711 GISWVDNIKCRNLHNATLWQCPSAPWNPHSCTQEEEVWINC 751
>ref|NP_001153838.1| scavenger receptor cysteine-rich domain-containing group B protein
precursor [Mus musculus].
Length = 586
Score = 120 bits (301), Expect = 4e-27
Identities = 55/106 (51%), Positives = 65/106 (61%)
Frame = +2
Query: 209 GVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGA 388
G K G +RL GG + GRVE+ Y+G WGTVCD WD DA V CR G A G
Sbjct: 349 GKKSGRLRLVGGPSPCRGRVEVLYAGGWGTVCDDDWDFADARVACREAGCGPALGATGLG 408
Query: 389 AFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
FG G GP++LD V C GTE L+DC LGW Q +CGH+EDA +C
Sbjct: 409 HFGYGRGPVLLDNVGCTGTEARLSDCFHLGWGQHNCGHHEDAGALC 454
Score = 118 bits (295), Expect = 2e-26
Identities = 57/106 (53%), Positives = 69/106 (65%)
Frame = +2
Query: 209 GVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGA 388
G +G +RL GG + +GRVEI + G WGTVCD W L DA+VVCR LG A A
Sbjct: 194 GKGEGSVRLVGGASPCQGRVEILHGGVWGTVCDDDWGLQDAAVVCRQLGCGVALAATTNA 253
Query: 389 AFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
FG G+G I+LD V CEG E LA C+SLGW +CGH+EDA V+C
Sbjct: 254 FFGYGTGHILLDNVHCEGGEPRLAACQSLGWGVHNCGHHEDAGVLC 299
Score = 114 bits (285), Expect = 3e-25
Identities = 54/104 (51%), Positives = 66/104 (63%)
Frame = +2
Query: 215 KDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAF 394
+DG +RLA G EGRVE+F +WGTVCD WDL A V+CR LG A G A F
Sbjct: 480 RDGHLRLASGTHRCEGRVELFLGQRWGTVCDDAWDLRAAIVLCRQLGCGQALAAPGEAHF 539
Query: 395 GPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GPG GPI+LD V+C G E +L C + W +C H+EDASV+C
Sbjct: 540 GPGRGPILLDNVKCRGDESTLLLCSHIRWDVHNCDHSEDASVLC 583
Score = 109 bits (273), Expect = 7e-24
Identities = 50/101 (49%), Positives = 64/101 (63%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
++RL GG + GR+E+ +SG WG+VCD WD+ DA+VVCR LG AFG G
Sbjct: 68 ELRLVGGPSRCRGRLEVMHSGSWGSVCDDDWDVVDANVVCRQLGCGLALPVPRPLAFGQG 127
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GPI LD VEC G E SL++C S GW +C H ED +V+C
Sbjct: 128 RGPIFLDNVECRGQEASLSECGSRGWGVHNCFHYEDVAVLC 168
>ref|NP_031795.2| deleted in malignant brain tumors 1 protein [Mus musculus].
Length = 1946
Score = 117 bits (294), Expect = 3e-26
Identities = 58/110 (52%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Frame = +2
Query: 203 TQGVKDG-DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKAL 379
T G G +RL G +GRVEI Y G WGTVCD WDL DA+VVCR LG A
Sbjct: 28 TDGTDSGLAVRLVNGGDRCQGRVEILYQGSWGTVCDDSWDLNDANVVCRQLGCGLAVSAP 87
Query: 380 GGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G A FG GSGPI++D+V C G E L C GW+ +CGH EDA VIC+
Sbjct: 88 GNARFGQGSGPIVMDDVACGGYEDYLWRCSHRGWLSHNCGHQEDAGVICS 137
Score = 117 bits (292), Expect = 5e-26
Identities = 60/121 (49%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
Frame = +2
Query: 203 TQGVKDG-DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKAL 379
T G G +RL G +GRVEI Y G WGTVCD WD DA+VVCR LG A
Sbjct: 315 TAGTDSGLAVRLVNGGDRCQGRVEILYQGSWGTVCDDSWDTNDANVVCRQLGCGWAVSAP 374
Query: 380 GGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLD 559
G A FGPGSG I+LD+V C G E L C GW+ +CGH+EDA VIC+ T D
Sbjct: 375 GNAYFGPGSGSIVLDDVACTGHEDYLWRCSHRGWLSHNCGHHEDAGVICSASQSSSPTPD 434
Query: 560 L 562
+
Sbjct: 435 V 435
Score = 117 bits (292), Expect = 5e-26
Identities = 56/112 (50%), Positives = 68/112 (60%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVEI Y G WGTVCD WDL DA+VVCR LG A G A FG G+
Sbjct: 463 VRLVNGGDRCQGRVEILYQGSWGTVCDDSWDLNDANVVCRQLGCGLAVSAPGSARFGQGT 522
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDL 562
GPI++D+V C G E L C GW+ +CGH+EDA VIC+ T D+
Sbjct: 523 GPIVMDDVACGGYEDYLWRCSHRGWLSHNCGHHEDAGVICSASQSSSPTPDV 574
Score = 116 bits (291), Expect = 6e-26
Identities = 56/112 (50%), Positives = 68/112 (60%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVEI Y G WGTVCD WDL DA+VVCR LG A G A FG G+
Sbjct: 602 VRLENGGDRCQGRVEILYQGSWGTVCDDSWDLNDANVVCRQLGCGLAVSAPGSARFGQGT 661
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDL 562
GPI++D+V C G E L C GW+ +CGH+EDA VIC+ T D+
Sbjct: 662 GPIVMDDVACGGYEDYLWRCSHRGWLSHNCGHHEDAGVICSASQSSSPTPDV 713
Score = 115 bits (289), Expect = 1e-25
Identities = 54/101 (53%), Positives = 64/101 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVEI Y G WGTVCD WD++DA+VVCR LG A G A FG G
Sbjct: 186 VRLVNGGDRCQGRVEILYQGSWGTVCDDSWDVSDANVVCRQLGCGWAVSAPGNAYFGQGQ 245
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH EDA VIC+
Sbjct: 246 GPIVLDDVACGGYENYLWSCSHQGWLSHNCGHQEDAGVICS 286
Score = 115 bits (289), Expect = 1e-25
Identities = 55/101 (54%), Positives = 64/101 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVEI Y G WGTVCD WD DA+VVCR LG A G A FGPGS
Sbjct: 741 VRLENGGDRCQGRVEILYQGSWGTVCDDSWDTKDANVVCRQLGCGWAVSAPGNAYFGPGS 800
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G I+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 801 GSIVLDDVACTGHEDYLWSCSHRGWLSHNCGHHEDAGVICS 841
Score = 112 bits (281), Expect = 9e-25
Identities = 53/100 (53%), Positives = 64/100 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G EGRVEI Y G WGTVCD W ++DA+VVCR LG + A G A FG GS
Sbjct: 1371 LRLVNGSNRCEGRVEILYRGSWGTVCDDSWGISDANVVCRQLGCGSALSAPGNAWFGQGS 1430
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
G I+LD+V C G E L +C GW+ +C H+EDA VIC
Sbjct: 1431 GLIVLDDVSCSGYESHLWNCHHPGWLVHNCRHSEDAGVIC 1470
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 67,693,013
Number of extensions: 1948730
Number of successful extensions: 9415
Number of sequences better than 1.0e-05: 26
Number of HSP's gapped: 9239
Number of HSP's successfully gapped: 87
Length of query: 710
Length of database: 15,617,559
Length adjustment: 108
Effective length of query: 602
Effective length of database: 12,373,671
Effective search space: 7448949942
Effective search space used: 7448949942
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-012726
(2130 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_005558.1| galectin-3-binding protein [Homo sapiens]. 773 0.0
Alignment gi|NP_003610.2| neurotrypsin precursor [Homo sapiens]. 134 4e-31
Alignment gi|NP_981961.2| scavenger receptor cysteine-rich type 1 protein... 122 2e-27
Alignment gi|NP_004235.4| scavenger receptor cysteine-rich type 1 protein... 122 2e-27
Alignment gi|XP_003403682.1| PREDICTED: deleted in malignant brain tumors... 120 7e-27
Alignment gi|XP_003403680.1| PREDICTED: deleted in malignant brain tumors... 120 7e-27
Alignment gi|NP_060049.2| deleted in malignant brain tumors 1 protein iso... 120 7e-27
Alignment gi|NP_015568.2| deleted in malignant brain tumors 1 protein iso... 120 7e-27
Alignment gi|NP_004397.2| deleted in malignant brain tumors 1 protein iso... 119 9e-27
Alignment gi|XP_003403681.1| PREDICTED: deleted in malignant brain tumors... 118 2e-26
>ref|NP_005558.1| galectin-3-binding protein [Homo sapiens].
Length = 585
Score = 773 bits (1995), Expect = 0.0
Identities = 383/585 (65%), Positives = 439/585 (75%), Gaps = 33/585 (5%)
Frame = +2
Query: 158 MAPXXXXXXXXXVTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASV 337
M P V GTQGV DGDMRLA G A N+GRVEIFY GQWGTVCD+LWDLTDASV
Sbjct: 1 MTPPRLFWVWLLVAGTQGVNDGDMRLADGGATNQGRVEIFYRGQWGTVCDNLWDLTDASV 60
Query: 338 VCRALGFRNVTKALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDAS 517
VCRALGF N T+ALG AAFG GSGPIMLDEV+C GTE SLADC+SLGW++S+C H DA
Sbjct: 61 VCRALGFENATQALGRAAFGQGSGPIMLDEVQCTGTEASLADCKSLGWLKSNCRHERDAG 120
Query: 518 VICTKETRGVHTLDLSGELPEALERIFESQTGCDLFIRVKAK-EDELGLCAHKLILSANP 694
V+CT ETR HTLDLS EL EAL +IF+SQ GCDL I V + ED LG C H +IL+AN
Sbjct: 121 VVCTNETRSTHTLDLSRELSEALGQIFDSQRGCDLSISVNVQGEDALGFCGHTVILTANL 180
Query: 695 EAHGLWKEPSSRVTMEVDAECVPVVRDYIRYLYSRRVDVSLASVQCFHQLASAYGAQQLQ 874
EA LWKEP S VTM VDAECVP+VRD +RY YSRR+D++L+SV+CFH+LASAYGA+QLQ
Sbjct: 181 EAQALWKEPGSNVTMSVDAECVPMVRDLLRYFYSRRIDITLSSVKCFHKLASAYGARQLQ 240
Query: 875 SFCAHLFAVLIPQDRSFRAPLDLYAYALASRDPVLEEVCVQFLTWNFEALTQAEAWPSVP 1054
+CA LFA+L+PQD SF+ PLDLYAYA+A+ D +LE++C+QFL WNFEALTQAEAWPSVP
Sbjct: 241 GYCASLFAILLPQDPSFQMPLDLYAYAVATGDALLEKLCLQFLAWNFEALTQAEAWPSVP 300
Query: 1055 AALLHSLLARXXXXXXXXXXXXXXXDVWSRERGASHGEVEGLVEKVRFPMMPPRDLFQLQ 1234
LL LL R D WS ASH EVEGLVEK+RFPMM P +LF+LQ
Sbjct: 301 TDLLQLLLPRSDLAVPSELALLKAVDTWSWGERASHEEVEGLVEKIRFPMMLPEELFELQ 360
Query: 1235 FNLSLYRSHEALFQRKTLQALEFHTVPFQLLAQYRGLNLSGDAYRPRLYTSPRWSANQTA 1414
FNLSLY SHEALFQ+KTLQALEFHTVPFQLLA+Y+GLNL+ D Y+PR+YTSP WSA T
Sbjct: 361 FNLSLYWSHEALFQKKTLQALEFHTVPFQLLARYKGLNLTEDTYKPRIYTSPTWSAFVTD 420
Query: 1415 SAYS--------------------------------PYESFQTPKHPSFLFQDSSVSWSF 1498
S++S PY+SFQTP+HPSFLFQD VSWS
Sbjct: 421 SSWSARKSQLVYQSRRGPLVKYSSDYFQAPSDYRYYPYQSFQTPQHPSFLFQDKRVSWSL 480
Query: 1499 VYLPTVQSCWNYGFSCSPDEPPLLGLSKTSSLDPTIGYENKALMLCEGSFVADIAAFKDT 1678
VYLPT+QSCWNYGFSCS DE P+LGL+K+ D TI YENKALMLCEG FVAD+ F+
Sbjct: 481 VYLPTIQSCWNYGFSCSSDELPVLGLTKSGGSDRTIAYENKALMLCEGLFVADVTDFEGW 540
Query: 1679 KALIPSALGTNSSRSAAFFPCPAGFFSSFQAVIRPFYLTNSSGVD 1813
KA IPSAL TNSS+S + FPCPAG F+ F+ VIRPFYLTNSSGVD
Sbjct: 541 KAAIPSALDTNSSKSTSSFPCPAGHFNGFRTVIRPFYLTNSSGVD 585
>ref|NP_003610.2| neurotrypsin precursor [Homo sapiens].
Length = 875
Score = 134 bits (336), Expect = 4e-31
Identities = 68/134 (50%), Positives = 82/134 (61%), Gaps = 3/134 (2%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RLAGG + +EGRVE++++GQWGTVCD WD DA V+CR LG + KA A FG GS
Sbjct: 280 IRLAGGSSVHEGRVELYHAGQWGTVCDDQWDDADAEVICRQLGLSGIAKAWHQAYFGEGS 339
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTL-DLSGELPEA 583
GP+MLDEV C G ELS+ C W + +CGH EDA V CT T GV L G
Sbjct: 340 GPVMLDEVRCTGNELSIEQCPKSSWGEHNCGHKEDAGVSCTPLTDGVIRLAGGKGSHEGR 399
Query: 584 LERIFESQTG--CD 619
LE + Q G CD
Sbjct: 400 LEVYYRGQWGTVCD 413
Score = 109 bits (272), Expect = 1e-23
Identities = 51/100 (51%), Positives = 65/100 (65%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL GE EGRVE+F +GQWGT+CD W DA+V+CR LG++ +A A FG G
Sbjct: 500 VRLMDGENKKEGRVEVFINGQWGTICDDGWTDKDAAVICRQLGYKGPARARTMAYFGEGK 559
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVIC 526
GPI +D V+C G E SLADC + +C H+EDA VIC
Sbjct: 560 GPIHVDNVKCTGNERSLADCIKQDIGRHNCRHSEDAGVIC 599
Score = 105 bits (261), Expect = 2e-22
Identities = 52/115 (45%), Positives = 64/115 (55%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
DG +RLAGG+ +EGR+E++Y GQWGTVCD W + VVCR LGF+ K F
Sbjct: 384 DGVIRLAGGKGSHEGRLEVYYRGQWGTVCDDGWTELNTYVVCRQLGFK-YGKQASANHFE 442
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKETRGVHTLDL 562
+GPI LD+V C G E C W + DC H ED S+ C G H L L
Sbjct: 443 ESTGPIWLDDVSCSGKETRFLQCSRRQWGRHDCSHREDVSIACYPGGEG-HRLSL 496
Score = 73.6 bits (179), Expect = 7e-13
Identities = 40/105 (38%), Positives = 52/105 (49%)
Frame = +2
Query: 215 KDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAF 394
+ G +RL GG+ + EG VE++ SG WGTVC S WD +DASV+C L A
Sbjct: 166 RHGSVRLRGGKNEFEGTVEVYASGVWGTVCSSHWDDSDASVICHQLQLGGKGIAKQTPFS 225
Query: 395 GPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G G PI V C G E ++ C W C A+V C+
Sbjct: 226 GLGLIPIYWSNVRCRGDEENILLCEKDIWQGGVCPQKMAAAVTCS 270
>ref|NP_981961.2| scavenger receptor cysteine-rich type 1 protein M130 isoform b [Homo
sapiens].
Length = 1121
Score = 122 bits (305), Expect = 2e-27
Identities = 54/107 (50%), Positives = 68/107 (63%)
Frame = +2
Query: 212 VKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAA 391
++ G +RL G GRVEI++ G WGT+CD WDL+DA VVCR LG A G A
Sbjct: 714 IESGQLRLVNGGGRCAGRVEIYHEGSWGTICDDSWDLSDAHVVCRQLGCGEAINATGSAH 773
Query: 392 FGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK 532
FG G+GPI LDE++C G E + C S GW Q +C H EDA VIC++
Sbjct: 774 FGEGTGPIWLDEMKCNGKESRIWQCHSHGWGQQNCRHKEDAGVICSE 820
Score = 118 bits (295), Expect = 2e-26
Identities = 56/104 (53%), Positives = 67/104 (64%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
D +RL G GRVEI++ G WGTVCD WDL DA VVC+ LG KA A FG
Sbjct: 926 DNKIRLQEGPTSCSGRVEIWHGGSWGTVCDDSWDLDDAQVVCQQLGCGPALKAFKEAEFG 985
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G+GPI L+EV+C+G E SL DC + W S+CGH EDA+V CT
Sbjct: 986 QGTGPIWLNEVKCKGNESSLWDCPARRWGHSECGHKEDAAVNCT 1029
Score = 100 bits (249), Expect = 5e-21
Identities = 54/135 (40%), Positives = 76/135 (56%), Gaps = 3/135 (2%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
+MRL G GR+EI + G+WGTVCD +++ ASV+CR L + G + FG G
Sbjct: 158 EMRLTRGGNMCSGRIEIKFQGRWGTVCDDNFNIDHASVICRQLECGSAVSFSGSSNFGEG 217
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK-ETRGVHTLDLSGELPE 580
SGPI D++ C G E +L +C+ GW + +C H EDA VIC+K + +D E
Sbjct: 218 SGPIWFDDLICNGNESALWNCKHQGWGKHNCDHAEDAGVICSKGADLSLRLVDGVTECSG 277
Query: 581 ALERIFESQTG--CD 619
LE F+ + G CD
Sbjct: 278 RLEVRFQGEWGTICD 292
Score = 95.5 bits (236), Expect = 2e-19
Identities = 48/113 (42%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Frame = +2
Query: 194 VTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
VT + G D ++RL GE GRVE+ +WGTVC++ W + SV+C LG K
Sbjct: 40 VTSSLGGTDKELRLVDGENKCSGRVEVKVQEEWGTVCNNGWSMEAVSVICNQLGCPTAIK 99
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGW-MQSDCGHNEDASVICT 529
A G A GSG I +D V C G E +L DC+ GW S+C H +DA V C+
Sbjct: 100 APGWANSSAGSGRIWMDHVSCRGNESALWDCKHDGWGKHSNCTHQQDAGVTCS 152
Score = 93.2 bits (230), Expect = 9e-19
Identities = 42/104 (40%), Positives = 58/104 (55%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
D +RL G + GR+E+ + G+WGT+CD WD DA+V C+ LG A+G
Sbjct: 263 DLSLRLVDGVTECSGRLEVRFQGEWGTICDDGWDSYDAAVACKQLGCPTAVTAIGRVNAS 322
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G G I LD V C+G E ++ C+ W + C HNEDA V C+
Sbjct: 323 KGFGHIWLDSVSCQGHEPAIWQCKHHEWGKHYCNHNEDAGVTCS 366
Score = 89.0 bits (219), Expect = 2e-17
Identities = 43/103 (41%), Positives = 59/103 (57%)
Frame = +2
Query: 230 RLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSG 409
RL GG+ GRVE+ + WG++CDS + L ASV+CR L V LGGA FG G+G
Sbjct: 479 RLVGGDIPCSGRVEVKHGDTWGSICDSDFSLEAASVLCRELQCGTVVSILGGAHFGEGNG 538
Query: 410 PIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKET 538
I +E +CEG E L+ C + C H+ D V+C++ T
Sbjct: 539 QIWAEEFQCEGHESHLSLCPVAPRPEGTCSHSRDVGVVCSRYT 581
Score = 79.7 bits (195), Expect = 1e-14
Identities = 41/102 (40%), Positives = 55/102 (53%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
++RL G+ EGRVE+ G WG++C+S WD+ DA V+C+ L GGA FG G
Sbjct: 582 EIRLVNGKTPCEGRVELKTLGAWGSLCNSHWDIEDAHVLCQQLKCGVALSTPGGARFGKG 641
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
+G I C GTE + DC S C + ASVIC+
Sbjct: 642 NGQIWRHMFHCTGTEQHMGDCPVTALGASLCPSEQVASVICS 683
Score = 61.6 bits (148), Expect = 3e-09
Identities = 39/112 (34%), Positives = 52/112 (46%)
Frame = +2
Query: 194 VTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
VT + G D ++RL GG + G VE+ G VCD W L +A VVCR LG + K
Sbjct: 363 VTCSDG-SDLELRLRGGGSRCAGTVEVEIQRLLGKVCDRGWGLKEADVVCRQLGCGSALK 421
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
+ L C G E SL DC++ W C H E+A + C+
Sbjct: 422 TSYQVYSKIQATNTWLFLSSCNGNETSLWDCKNWQWGGLTCDHYEEAKITCS 473
Score = 54.3 bits (129), Expect = 4e-07
Identities = 31/94 (32%), Positives = 45/94 (47%)
Frame = +2
Query: 260 GRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECE 439
GR+E+FY+G WGTV S T VVCR LG + K + S P+ +D V+C
Sbjct: 837 GRLEVFYNGAWGTVGKSSMSETTVGVVCRQLGCADKGKINPASLDKAMSIPMWVDNVQCP 896
Query: 440 GTELSLADCRSLGWMQSDCGHNEDASVICTKETR 541
+L C S W + +E+ + C + R
Sbjct: 897 KGPDTLWQCPSSPWEKRLASPSEETWITCDNKIR 930
>ref|NP_004235.4| scavenger receptor cysteine-rich type 1 protein M130 isoform a [Homo
sapiens].
Length = 1156
Score = 122 bits (305), Expect = 2e-27
Identities = 54/107 (50%), Positives = 68/107 (63%)
Frame = +2
Query: 212 VKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAA 391
++ G +RL G GRVEI++ G WGT+CD WDL+DA VVCR LG A G A
Sbjct: 714 IESGQLRLVNGGGRCAGRVEIYHEGSWGTICDDSWDLSDAHVVCRQLGCGEAINATGSAH 773
Query: 392 FGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK 532
FG G+GPI LDE++C G E + C S GW Q +C H EDA VIC++
Sbjct: 774 FGEGTGPIWLDEMKCNGKESRIWQCHSHGWGQQNCRHKEDAGVICSE 820
Score = 118 bits (295), Expect = 2e-26
Identities = 56/104 (53%), Positives = 67/104 (64%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
D +RL G GRVEI++ G WGTVCD WDL DA VVC+ LG KA A FG
Sbjct: 926 DNKIRLQEGPTSCSGRVEIWHGGSWGTVCDDSWDLDDAQVVCQQLGCGPALKAFKEAEFG 985
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G+GPI L+EV+C+G E SL DC + W S+CGH EDA+V CT
Sbjct: 986 QGTGPIWLNEVKCKGNESSLWDCPARRWGHSECGHKEDAAVNCT 1029
Score = 100 bits (249), Expect = 5e-21
Identities = 54/135 (40%), Positives = 76/135 (56%), Gaps = 3/135 (2%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
+MRL G GR+EI + G+WGTVCD +++ ASV+CR L + G + FG G
Sbjct: 158 EMRLTRGGNMCSGRIEIKFQGRWGTVCDDNFNIDHASVICRQLECGSAVSFSGSSNFGEG 217
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTK-ETRGVHTLDLSGELPE 580
SGPI D++ C G E +L +C+ GW + +C H EDA VIC+K + +D E
Sbjct: 218 SGPIWFDDLICNGNESALWNCKHQGWGKHNCDHAEDAGVICSKGADLSLRLVDGVTECSG 277
Query: 581 ALERIFESQTG--CD 619
LE F+ + G CD
Sbjct: 278 RLEVRFQGEWGTICD 292
Score = 95.5 bits (236), Expect = 2e-19
Identities = 48/113 (42%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Frame = +2
Query: 194 VTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
VT + G D ++RL GE GRVE+ +WGTVC++ W + SV+C LG K
Sbjct: 40 VTSSLGGTDKELRLVDGENKCSGRVEVKVQEEWGTVCNNGWSMEAVSVICNQLGCPTAIK 99
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGW-MQSDCGHNEDASVICT 529
A G A GSG I +D V C G E +L DC+ GW S+C H +DA V C+
Sbjct: 100 APGWANSSAGSGRIWMDHVSCRGNESALWDCKHDGWGKHSNCTHQQDAGVTCS 152
Score = 93.2 bits (230), Expect = 9e-19
Identities = 42/104 (40%), Positives = 58/104 (55%)
Frame = +2
Query: 218 DGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFG 397
D +RL G + GR+E+ + G+WGT+CD WD DA+V C+ LG A+G
Sbjct: 263 DLSLRLVDGVTECSGRLEVRFQGEWGTICDDGWDSYDAAVACKQLGCPTAVTAIGRVNAS 322
Query: 398 PGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
G G I LD V C+G E ++ C+ W + C HNEDA V C+
Sbjct: 323 KGFGHIWLDSVSCQGHEPAIWQCKHHEWGKHYCNHNEDAGVTCS 366
Score = 89.0 bits (219), Expect = 2e-17
Identities = 43/103 (41%), Positives = 59/103 (57%)
Frame = +2
Query: 230 RLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSG 409
RL GG+ GRVE+ + WG++CDS + L ASV+CR L V LGGA FG G+G
Sbjct: 479 RLVGGDIPCSGRVEVKHGDTWGSICDSDFSLEAASVLCRELQCGTVVSILGGAHFGEGNG 538
Query: 410 PIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICTKET 538
I +E +CEG E L+ C + C H+ D V+C++ T
Sbjct: 539 QIWAEEFQCEGHESHLSLCPVAPRPEGTCSHSRDVGVVCSRYT 581
Score = 79.7 bits (195), Expect = 1e-14
Identities = 41/102 (40%), Positives = 55/102 (53%)
Frame = +2
Query: 224 DMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPG 403
++RL G+ EGRVE+ G WG++C+S WD+ DA V+C+ L GGA FG G
Sbjct: 582 EIRLVNGKTPCEGRVELKTLGAWGSLCNSHWDIEDAHVLCQQLKCGVALSTPGGARFGKG 641
Query: 404 SGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
+G I C GTE + DC S C + ASVIC+
Sbjct: 642 NGQIWRHMFHCTGTEQHMGDCPVTALGASLCPSEQVASVICS 683
Score = 61.6 bits (148), Expect = 3e-09
Identities = 39/112 (34%), Positives = 52/112 (46%)
Frame = +2
Query: 194 VTGTQGVKDGDMRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTK 373
VT + G D ++RL GG + G VE+ G VCD W L +A VVCR LG + K
Sbjct: 363 VTCSDG-SDLELRLRGGGSRCAGTVEVEIQRLLGKVCDRGWGLKEADVVCRQLGCGSALK 421
Query: 374 ALGGAAFGPGSGPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
+ L C G E SL DC++ W C H E+A + C+
Sbjct: 422 TSYQVYSKIQATNTWLFLSSCNGNETSLWDCKNWQWGGLTCDHYEEAKITCS 473
Score = 54.3 bits (129), Expect = 4e-07
Identities = 31/94 (32%), Positives = 45/94 (47%)
Frame = +2
Query: 260 GRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECE 439
GR+E+FY+G WGTV S T VVCR LG + K + S P+ +D V+C
Sbjct: 837 GRLEVFYNGAWGTVGKSSMSETTVGVVCRQLGCADKGKINPASLDKAMSIPMWVDNVQCP 896
Query: 440 GTELSLADCRSLGWMQSDCGHNEDASVICTKETR 541
+L C S W + +E+ + C + R
Sbjct: 897 KGPDTLWQCPSSPWEKRLASPSEETWITCDNKIR 930
>ref|XP_003403682.1| PREDICTED: deleted in malignant brain tumors 1 protein isoform 3
[Homo sapiens].
Length = 1133
Score = 120 bits (300), Expect = 7e-27
Identities = 55/101 (54%), Positives = 66/101 (65%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG T A G A FG GS
Sbjct: 231 LRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGWATSAPGNARFGQGS 290
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C + GW+ +CGH+EDA VIC+
Sbjct: 291 GPIVLDDVRCSGHESYLWSCPNNGWLSHNCGHHEDAGVICS 331
Score = 118 bits (296), Expect = 2e-26
Identities = 52/90 (57%), Positives = 61/90 (67%)
Frame = +2
Query: 260 GRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECE 439
GRVEI++ G WGTVCD W + +A VVCR LG ALG A FG GSGPI LD+VEC
Sbjct: 617 GRVEIYHGGTWGTVCDDSWTIQEAEVVCRQLGCGRAVSALGNAYFGSGSGPITLDDVECS 676
Query: 440 GTELSLADCRSLGWMQSDCGHNEDASVICT 529
GTE +L CR+ GW +C H EDA VIC+
Sbjct: 677 GTESTLWQCRNRGWFSHNCNHREDAGVICS 706
Score = 117 bits (294), Expect = 3e-26
Identities = 55/101 (54%), Positives = 64/101 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G+ +GRVEI Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 102 LRLVNGDGRCQGRVEILYRGSWGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNAWFGQGS 161
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 162 GPIALDDVRCSGHESYLWSCPHNGWLTHNCGHSEDAGVICS 202
Score = 116 bits (291), Expect = 7e-26
Identities = 54/101 (53%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 360 LRLVNGGDRCRGRVEVLYQGSWGTVCDDYWDTNDANVVCRQLGCGWAMSAPGNAQFGQGS 419
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 420 GPIVLDDVRCSGHESYLWSCPHNGWLTHNCGHHEDAGVICS 460
>ref|XP_003403680.1| PREDICTED: deleted in malignant brain tumors 1 protein isoform 1
[Homo sapiens].
Length = 1788
Score = 120 bits (300), Expect = 7e-27
Identities = 55/101 (54%), Positives = 66/101 (65%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG T A G A FG GS
Sbjct: 626 LRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGWATSAPGNARFGQGS 685
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C + GW+ +CGH+EDA VIC+
Sbjct: 686 GPIVLDDVRCSGHESYLWSCPNNGWLSHNCGHHEDAGVICS 726
Score = 118 bits (296), Expect = 2e-26
Identities = 52/90 (57%), Positives = 61/90 (67%)
Frame = +2
Query: 260 GRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECE 439
GRVEI++ G WGTVCD W + +A VVCR LG ALG A FG GSGPI LD+VEC
Sbjct: 1272 GRVEIYHGGTWGTVCDDSWTIQEAEVVCRQLGCGRAVSALGNAYFGSGSGPITLDDVECS 1331
Query: 440 GTELSLADCRSLGWMQSDCGHNEDASVICT 529
GTE +L CR+ GW +C H EDA VIC+
Sbjct: 1332 GTESTLWQCRNRGWFSHNCNHREDAGVICS 1361
Score = 117 bits (294), Expect = 3e-26
Identities = 55/101 (54%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G+ +GRVEI Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 102 LRLVNGDGRCQGRVEILYRGSWGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNAWFGQGS 161
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI LD+V C G E L C GW+ +CGH EDA VIC+
Sbjct: 162 GPIALDDVRCSGHESYLWSCPHNGWLSHNCGHGEDAGVICS 202
Score = 117 bits (293), Expect = 4e-26
Identities = 54/101 (53%), Positives = 64/101 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 755 LRLVNGGDRCQGRVEVLYQGSWGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGS 814
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 815 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHSEDAGVICS 855
Score = 117 bits (292), Expect = 6e-26
Identities = 54/101 (53%), Positives = 64/101 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 494 LRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGWAMLAPGNARFGQGS 553
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 554 GPIVLDDVRCSGNESYLWSCPHNGWLSHNCGHSEDAGVICS 594
Score = 117 bits (292), Expect = 6e-26
Identities = 54/101 (53%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 884 LRLVNGGDRCRGRVEVLYQGSWGTVCDDYWDTNDANVVCRQLGCGWAMSAPGNAQFGQGS 943
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 944 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHHEDAGVICS 984
Score = 117 bits (292), Expect = 6e-26
Identities = 54/101 (53%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 1015 LRLVNGGDRCRGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGS 1074
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 1075 GPIVLDDVRCSGNESYLWSCPHKGWLTHNCGHHEDAGVICS 1115
Score = 116 bits (291), Expect = 7e-26
Identities = 54/101 (53%), Positives = 65/101 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD +DA+VVCR LG T A G A FG GS
Sbjct: 363 LRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTSDANVVCRQLGCGWATSAPGNARFGQGS 422
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +C H+EDA VIC+
Sbjct: 423 GPIVLDDVRCSGYESYLWSCPHNGWLSHNCQHSEDAGVICS 463
Score = 116 bits (290), Expect = 9e-26
Identities = 54/101 (53%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 234 LRLVNGGDRCRGRVEVLYRGSWGTVCDDYWDTNDANVVCRQLGCGWAMSAPGNAQFGQGS 293
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 294 GPIVLDDVRCSGHESYLWSCPHNGWLTHNCGHSEDAGVICS 334
>ref|NP_060049.2| deleted in malignant brain tumors 1 protein isoform c precursor
[Homo sapiens].
Length = 2403
Score = 120 bits (300), Expect = 7e-27
Identities = 55/101 (54%), Positives = 66/101 (65%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG T A G A FG GS
Sbjct: 592 LRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGWATSAPGNARFGQGS 651
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C + GW+ +CGH+EDA VIC+
Sbjct: 652 GPIVLDDVRCSGHESYLWSCPNNGWLSHNCGHHEDAGVICS 692
Score = 120 bits (300), Expect = 7e-27
Identities = 55/101 (54%), Positives = 65/101 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG T A G A FG GS
Sbjct: 723 LRLVNGSDRCQGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGWATSAPGNARFGQGS 782
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 783 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHHEDAGVICS 823
Score = 119 bits (299), Expect = 9e-27
Identities = 55/101 (54%), Positives = 65/101 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG T A G A FG GS
Sbjct: 1241 LRLVNGGDRCQGRVEVLYRGSWGTVCDDYWDTNDANVVCRQLGCGWATSAPGNARFGQGS 1300
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 1301 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHHEDAGVICS 1341
Score = 119 bits (299), Expect = 9e-27
Identities = 55/101 (54%), Positives = 65/101 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG T A G A FG GS
Sbjct: 1370 LRLVNGGDRCQGRVEVLYRGSWGTVCDDYWDTNDANVVCRQLGCGWATSAPGNARFGQGS 1429
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 1430 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHHEDAGVICS 1470
Score = 118 bits (296), Expect = 2e-26
Identities = 52/90 (57%), Positives = 61/90 (67%)
Frame = +2
Query: 260 GRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECE 439
GRVEI++ G WGTVCD W + +A VVCR LG ALG A FG GSGPI LD+VEC
Sbjct: 1887 GRVEIYHGGTWGTVCDDSWTIQEAEVVCRQLGCGRAVSALGNAYFGSGSGPITLDDVECS 1946
Query: 440 GTELSLADCRSLGWMQSDCGHNEDASVICT 529
GTE +L CR+ GW +C H EDA VIC+
Sbjct: 1947 GTESTLWQCRNRGWFSHNCNHREDAGVICS 1976
Score = 117 bits (294), Expect = 3e-26
Identities = 55/101 (54%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G+ +GRVEI Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 102 LRLVNGDGRCQGRVEILYRGSWGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNAWFGQGS 161
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI LD+V C G E L C GW+ +CGH EDA VIC+
Sbjct: 162 GPIALDDVRCSGHESYLWSCPHNGWLSHNCGHGEDAGVICS 202
Score = 117 bits (293), Expect = 4e-26
Identities = 54/101 (53%), Positives = 64/101 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 983 LRLVNGGDRCQGRVEVLYQGSWGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGS 1042
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 1043 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHSEDAGVICS 1083
Score = 117 bits (293), Expect = 4e-26
Identities = 54/101 (53%), Positives = 64/101 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 1112 LRLVNGGDRCQGRVEVLYRGSWGTVCDDYWDTNDANVVCRQLGCGWAMSAPGNARFGQGS 1171
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 1172 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHHEDAGVICS 1212
Score = 117 bits (292), Expect = 6e-26
Identities = 54/101 (53%), Positives = 64/101 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 484 LRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGWAMLAPGNARFGQGS 543
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 544 GPIVLDDVRCSGNESYLWSCPHNGWLSHNCGHSEDAGVICS 584
Score = 117 bits (292), Expect = 6e-26
Identities = 54/101 (53%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 1499 LRLVNGGDRCRGRVEVLYQGSWGTVCDDYWDTNDANVVCRQLGCGWAMSAPGNAQFGQGS 1558
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 1559 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHHEDAGVICS 1599
Score = 117 bits (292), Expect = 6e-26
Identities = 54/101 (53%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 1630 LRLVNGGDRCRGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGS 1689
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 1690 GPIVLDDVRCSGNESYLWSCPHKGWLTHNCGHHEDAGVICS 1730
Score = 116 bits (291), Expect = 7e-26
Identities = 54/101 (53%), Positives = 65/101 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD +DA+VVCR LG T A G A FG GS
Sbjct: 363 LRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTSDANVVCRQLGCGWATSAPGNARFGQGS 422
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +C H+EDA VIC+
Sbjct: 423 GPIVLDDVRCSGYESYLWSCPHNGWLSHNCQHSEDAGVICS 463
Score = 116 bits (291), Expect = 7e-26
Identities = 54/101 (53%), Positives = 65/101 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD +DA+VVCR LG T A G A FG GS
Sbjct: 852 LRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTSDANVVCRQLGCGWATSAPGNARFGQGS 911
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +C H+EDA VIC+
Sbjct: 912 GPIVLDDVRCSGYESYLWSCPHNGWLSHNCQHSEDAGVICS 952
Score = 116 bits (290), Expect = 9e-26
Identities = 54/101 (53%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 234 LRLVNGGDRCRGRVEVLYRGSWGTVCDDYWDTNDANVVCRQLGCGWAMSAPGNAQFGQGS 293
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 294 GPIVLDDVRCSGHESYLWSCPHNGWLTHNCGHSEDAGVICS 334
>ref|NP_015568.2| deleted in malignant brain tumors 1 protein isoform b precursor
[Homo sapiens].
Length = 2413
Score = 120 bits (300), Expect = 7e-27
Identities = 55/101 (54%), Positives = 66/101 (65%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG T A G A FG GS
Sbjct: 602 LRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGWATSAPGNARFGQGS 661
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C + GW+ +CGH+EDA VIC+
Sbjct: 662 GPIVLDDVRCSGHESYLWSCPNNGWLSHNCGHHEDAGVICS 702
Score = 120 bits (300), Expect = 7e-27
Identities = 55/101 (54%), Positives = 65/101 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG T A G A FG GS
Sbjct: 733 LRLVNGSDRCQGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGWATSAPGNARFGQGS 792
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 793 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHHEDAGVICS 833
Score = 119 bits (299), Expect = 9e-27
Identities = 55/101 (54%), Positives = 65/101 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG T A G A FG GS
Sbjct: 1251 LRLVNGGDRCQGRVEVLYRGSWGTVCDDYWDTNDANVVCRQLGCGWATSAPGNARFGQGS 1310
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 1311 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHHEDAGVICS 1351
Score = 119 bits (299), Expect = 9e-27
Identities = 55/101 (54%), Positives = 65/101 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG T A G A FG GS
Sbjct: 1380 LRLVNGGDRCQGRVEVLYRGSWGTVCDDYWDTNDANVVCRQLGCGWATSAPGNARFGQGS 1439
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 1440 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHHEDAGVICS 1480
Score = 118 bits (296), Expect = 2e-26
Identities = 52/90 (57%), Positives = 61/90 (67%)
Frame = +2
Query: 260 GRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECE 439
GRVEI++ G WGTVCD W + +A VVCR LG ALG A FG GSGPI LD+VEC
Sbjct: 1897 GRVEIYHGGTWGTVCDDSWTIQEAEVVCRQLGCGRAVSALGNAYFGSGSGPITLDDVECS 1956
Query: 440 GTELSLADCRSLGWMQSDCGHNEDASVICT 529
GTE +L CR+ GW +C H EDA VIC+
Sbjct: 1957 GTESTLWQCRNRGWFSHNCNHREDAGVICS 1986
Score = 117 bits (294), Expect = 3e-26
Identities = 55/101 (54%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G+ +GRVEI Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 102 LRLVNGDGRCQGRVEILYRGSWGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNAWFGQGS 161
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI LD+V C G E L C GW+ +CGH EDA VIC+
Sbjct: 162 GPIALDDVRCSGHESYLWSCPHNGWLSHNCGHGEDAGVICS 202
Score = 117 bits (293), Expect = 4e-26
Identities = 54/101 (53%), Positives = 64/101 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 993 LRLVNGGDRCQGRVEVLYQGSWGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGS 1052
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 1053 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHSEDAGVICS 1093
Score = 117 bits (293), Expect = 4e-26
Identities = 54/101 (53%), Positives = 64/101 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 1122 LRLVNGGDRCQGRVEVLYRGSWGTVCDDYWDTNDANVVCRQLGCGWAMSAPGNARFGQGS 1181
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 1182 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHHEDAGVICS 1222
Score = 117 bits (292), Expect = 6e-26
Identities = 54/101 (53%), Positives = 64/101 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 494 LRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGWAMLAPGNARFGQGS 553
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 554 GPIVLDDVRCSGNESYLWSCPHNGWLSHNCGHSEDAGVICS 594
Score = 117 bits (292), Expect = 6e-26
Identities = 54/101 (53%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 1509 LRLVNGGDRCRGRVEVLYQGSWGTVCDDYWDTNDANVVCRQLGCGWAMSAPGNAQFGQGS 1568
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 1569 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHHEDAGVICS 1609
Score = 117 bits (292), Expect = 6e-26
Identities = 54/101 (53%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 1640 LRLVNGGDRCRGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGS 1699
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 1700 GPIVLDDVRCSGNESYLWSCPHKGWLTHNCGHHEDAGVICS 1740
Score = 116 bits (291), Expect = 7e-26
Identities = 54/101 (53%), Positives = 65/101 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD +DA+VVCR LG T A G A FG GS
Sbjct: 363 LRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTSDANVVCRQLGCGWATSAPGNARFGQGS 422
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +C H+EDA VIC+
Sbjct: 423 GPIVLDDVRCSGYESYLWSCPHNGWLSHNCQHSEDAGVICS 463
Score = 116 bits (291), Expect = 7e-26
Identities = 54/101 (53%), Positives = 65/101 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD +DA+VVCR LG T A G A FG GS
Sbjct: 862 LRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTSDANVVCRQLGCGWATSAPGNARFGQGS 921
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +C H+EDA VIC+
Sbjct: 922 GPIVLDDVRCSGYESYLWSCPHNGWLSHNCQHSEDAGVICS 962
Score = 116 bits (290), Expect = 9e-26
Identities = 54/101 (53%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 234 LRLVNGGDRCRGRVEVLYRGSWGTVCDDYWDTNDANVVCRQLGCGWAMSAPGNAQFGQGS 293
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 294 GPIVLDDVRCSGHESYLWSCPHNGWLTHNCGHSEDAGVICS 334
>ref|NP_004397.2| deleted in malignant brain tumors 1 protein isoform a precursor [Homo
sapiens].
Length = 1785
Score = 119 bits (299), Expect = 9e-27
Identities = 55/101 (54%), Positives = 65/101 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG T A G A FG GS
Sbjct: 752 LRLVNGGDRCQGRVEVLYRGSWGTVCDDYWDTNDANVVCRQLGCGWATSAPGNARFGQGS 811
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 812 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHHEDAGVICS 852
Score = 118 bits (296), Expect = 2e-26
Identities = 52/90 (57%), Positives = 61/90 (67%)
Frame = +2
Query: 260 GRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECE 439
GRVEI++ G WGTVCD W + +A VVCR LG ALG A FG GSGPI LD+VEC
Sbjct: 1269 GRVEIYHGGTWGTVCDDSWTIQEAEVVCRQLGCGRAVSALGNAYFGSGSGPITLDDVECS 1328
Query: 440 GTELSLADCRSLGWMQSDCGHNEDASVICT 529
GTE +L CR+ GW +C H EDA VIC+
Sbjct: 1329 GTESTLWQCRNRGWFSHNCNHREDAGVICS 1358
Score = 117 bits (294), Expect = 3e-26
Identities = 55/101 (54%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G+ +GRVEI Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 102 LRLVNGDGRCQGRVEILYRGSWGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNAWFGQGS 161
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI LD+V C G E L C GW+ +CGH EDA VIC+
Sbjct: 162 GPIALDDVRCSGHESYLWSCPHNGWLSHNCGHGEDAGVICS 202
Score = 117 bits (293), Expect = 4e-26
Identities = 54/101 (53%), Positives = 64/101 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 494 LRLVNGGDRCQGRVEVLYQGSWGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGS 553
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 554 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHSEDAGVICS 594
Score = 117 bits (293), Expect = 4e-26
Identities = 54/101 (53%), Positives = 64/101 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 623 LRLVNGGDRCQGRVEVLYRGSWGTVCDDYWDTNDANVVCRQLGCGWAMSAPGNARFGQGS 682
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 683 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHHEDAGVICS 723
Score = 117 bits (292), Expect = 6e-26
Identities = 54/101 (53%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 881 LRLVNGGDRCRGRVEVLYQGSWGTVCDDYWDTNDANVVCRQLGCGWAMSAPGNAQFGQGS 940
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 941 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHHEDAGVICS 981
Score = 117 bits (292), Expect = 6e-26
Identities = 54/101 (53%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 1012 LRLVNGGDRCRGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGS 1071
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 1072 GPIVLDDVRCSGNESYLWSCPHKGWLTHNCGHHEDAGVICS 1112
Score = 116 bits (291), Expect = 7e-26
Identities = 54/101 (53%), Positives = 65/101 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD +DA+VVCR LG T A G A FG GS
Sbjct: 363 LRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTSDANVVCRQLGCGWATSAPGNARFGQGS 422
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +C H+EDA VIC+
Sbjct: 423 GPIVLDDVRCSGYESYLWSCPHNGWLSHNCQHSEDAGVICS 463
Score = 116 bits (290), Expect = 9e-26
Identities = 54/101 (53%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 234 LRLVNGGDRCRGRVEVLYRGSWGTVCDDYWDTNDANVVCRQLGCGWAMSAPGNAQFGQGS 293
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 294 GPIVLDDVRCSGHESYLWSCPHNGWLTHNCGHSEDAGVICS 334
>ref|XP_003403681.1| PREDICTED: deleted in malignant brain tumors 1 protein isoform 2
[Homo sapiens].
Length = 1662
Score = 118 bits (296), Expect = 2e-26
Identities = 52/90 (57%), Positives = 61/90 (67%)
Frame = +2
Query: 260 GRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGSGPIMLDEVECE 439
GRVEI++ G WGTVCD W + +A VVCR LG ALG A FG GSGPI LD+VEC
Sbjct: 1146 GRVEIYHGGTWGTVCDDSWTIQEAEVVCRQLGCGRAVSALGNAYFGSGSGPITLDDVECS 1205
Query: 440 GTELSLADCRSLGWMQSDCGHNEDASVICT 529
GTE +L CR+ GW +C H EDA VIC+
Sbjct: 1206 GTESTLWQCRNRGWFSHNCNHREDAGVICS 1235
Score = 117 bits (294), Expect = 3e-26
Identities = 55/101 (54%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G+ +GRVEI Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 102 LRLVNGDGRCQGRVEILYRGSWGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNAWFGQGS 161
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI LD+V C G E L C GW+ +CGH EDA VIC+
Sbjct: 162 GPIALDDVRCSGHESYLWSCPHNGWLSHNCGHGEDAGVICS 202
Score = 117 bits (293), Expect = 4e-26
Identities = 54/101 (53%), Positives = 64/101 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 629 LRLVNGGDRCQGRVEVLYQGSWGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGS 688
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 689 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHSEDAGVICS 729
Score = 117 bits (292), Expect = 6e-26
Identities = 54/101 (53%), Positives = 64/101 (63%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 500 LRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGWAMLAPGNARFGQGS 559
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 560 GPIVLDDVRCSGNESYLWSCPHNGWLSHNCGHSEDAGVICS 600
Score = 117 bits (292), Expect = 6e-26
Identities = 54/101 (53%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 758 LRLVNGGDRCRGRVEVLYQGSWGTVCDDYWDTNDANVVCRQLGCGWAMSAPGNAQFGQGS 817
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 818 GPIVLDDVRCSGHESYLWSCPHNGWLSHNCGHHEDAGVICS 858
Score = 117 bits (292), Expect = 6e-26
Identities = 54/101 (53%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 889 LRLVNGGDRCRGRVEVLYRGSWGTVCDDSWDTNDANVVCRQLGCGWAMSAPGNARFGQGS 948
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 949 GPIVLDDVRCSGNESYLWSCPHKGWLTHNCGHHEDAGVICS 989
Score = 116 bits (291), Expect = 7e-26
Identities = 54/101 (53%), Positives = 65/101 (64%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G +GRVE+ Y G WGTVCD WD +DA+VVCR LG T A G A FG GS
Sbjct: 363 LRLVNGGDRCQGRVEVLYRGSWGTVCDDSWDTSDANVVCRQLGCGWATSAPGNARFGQGS 422
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +C H+EDA VIC+
Sbjct: 423 GPIVLDDVRCSGYESYLWSCPHNGWLSHNCQHSEDAGVICS 463
Score = 116 bits (290), Expect = 9e-26
Identities = 54/101 (53%), Positives = 63/101 (62%)
Frame = +2
Query: 227 MRLAGGEADNEGRVEIFYSGQWGTVCDSLWDLTDASVVCRALGFRNVTKALGGAAFGPGS 406
+RL G GRVE+ Y G WGTVCD WD DA+VVCR LG A G A FG GS
Sbjct: 234 LRLVNGGDRCRGRVEVLYRGSWGTVCDDYWDTNDANVVCRQLGCGWAMSAPGNAQFGQGS 293
Query: 407 GPIMLDEVECEGTELSLADCRSLGWMQSDCGHNEDASVICT 529
GPI+LD+V C G E L C GW+ +CGH+EDA VIC+
Sbjct: 294 GPIVLDDVRCSGHESYLWSCPHNGWLTHNCGHSEDAGVICS 334
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 80,607,176
Number of extensions: 2373505
Number of successful extensions: 12290
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 12065
Number of HSP's successfully gapped: 127
Length of query: 710
Length of database: 18,297,164
Length adjustment: 110
Effective length of query: 600
Effective length of database: 14,671,124
Effective search space: 8802674400
Effective search space used: 8802674400
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)