Search to RefSeqCP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014719
(925 letters)
Database: RefSeq49_CP.fasta
33,336 sequences; 18,874,504 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_544010.2| PREDICTED: similar to X-prolyl aminopeptidase (... 485 e-137
Alignment gi|XP_864026.1| PREDICTED: similar to X-prolyl aminopeptidase (... 447 e-126
Alignment gi|XP_864001.1| PREDICTED: similar to X-prolyl aminopeptidase (... 296 2e-80
Alignment gi|XP_549245.2| PREDICTED: similar to Xaa-Pro aminopeptidase 2 ... 187 1e-47
>ref|XP_544010.2| PREDICTED: similar to X-prolyl aminopeptidase (aminopeptidase P) 1,
soluble isoform 1 [Canis familiaris].
Length = 623
Score = 485 bits (1248), Expect = e-137
Identities = 234/240 (97%), Positives = 237/240 (98%)
Frame = +2
Query: 206 MAPKVTSELLRQLRQAMKNLEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSA 385
MAPKVTSELLRQLRQAM+N EYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSA
Sbjct: 1 MAPKVTSELLRQLRQAMRNTEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSA 60
Query: 386 GTAIITEEHAAMWTDGRYFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVD 565
GTAIITEEHAAMWTDGRYFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVD
Sbjct: 61 GTAIITEEHAAMWTDGRYFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVD 120
Query: 566 PLIIPTDYWKKMAKVLRSAGHHLVPVKENLVDKIWTDRPERPCKPLLTLGLDYTGISWKD 745
PLIIPTDYWKKMAKVLRSAGHHL+PVKENLVDKIWTDRPERPCKPLL LGLDYTGISWKD
Sbjct: 121 PLIIPTDYWKKMAKVLRSAGHHLIPVKENLVDKIWTDRPERPCKPLLALGLDYTGISWKD 180
Query: 746 KVADLRLKMAERNVVWFVVTALDEIAWLLHLRGSDVEHNPVFFSYAIIGLETIMLFIDGD 925
KVADLRLKMAERNVVWFVVTALDEIAWL +LRGSDVEHNPVFFSYAIIGLETIMLFIDGD
Sbjct: 181 KVADLRLKMAERNVVWFVVTALDEIAWLFNLRGSDVEHNPVFFSYAIIGLETIMLFIDGD 240
>ref|XP_864026.1| PREDICTED: similar to X-prolyl aminopeptidase (aminopeptidase P) 1,
soluble isoform 4 [Canis familiaris].
Length = 624
Score = 447 bits (1151), Expect = e-126
Identities = 229/283 (80%), Positives = 234/283 (82%)
Frame = +2
Query: 77 MAASRKAPRVRANYQDFQLKNLRIIEPNEVTRSGYPGVGTDGRMAPKVTSELLRQLRQAM 256
MAASRKAPRVRAN+QDFQL+NLRIIEPNEV SG PGV TDGRMAPKVTSELLRQLRQAM
Sbjct: 1 MAASRKAPRVRANHQDFQLRNLRIIEPNEVIHSGDPGVKTDGRMAPKVTSELLRQLRQAM 60
Query: 257 KNLEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAIITEEHAAMWTDGR 436
+N EYVTEPIQAYIIPSGDAHQ
Sbjct: 61 RNTEYVTEPIQAYIIPSGDAHQ-------------------------------------- 82
Query: 437 YFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLR 616
AAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLR
Sbjct: 83 ----AAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLR 138
Query: 617 SAGHHLVPVKENLVDKIWTDRPERPCKPLLTLGLDYTGISWKDKVADLRLKMAERNVVWF 796
SAGHHL+PVKENLVDKIWTDRPERPCKPLL LGLDYTGISWKDKVADLRLKMAERNVVWF
Sbjct: 139 SAGHHLIPVKENLVDKIWTDRPERPCKPLLALGLDYTGISWKDKVADLRLKMAERNVVWF 198
Query: 797 VVTALDEIAWLLHLRGSDVEHNPVFFSYAIIGLETIMLFIDGD 925
VVTALDEIAWL +LRGSDVEHNPVFFSYAIIGLETIMLFIDGD
Sbjct: 199 VVTALDEIAWLFNLRGSDVEHNPVFFSYAIIGLETIMLFIDGD 241
>ref|XP_864001.1| PREDICTED: similar to X-prolyl aminopeptidase (aminopeptidase P) 1,
soluble isoform 3 [Canis familiaris].
Length = 580
Score = 296 bits (757), Expect = 2e-80
Identities = 141/145 (97%), Positives = 143/145 (98%)
Frame = +2
Query: 491 GLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLRSAGHHLVPVKENLVDKIW 670
GLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLRSAGHHL+PVKENLVDKIW
Sbjct: 53 GLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLRSAGHHLIPVKENLVDKIW 112
Query: 671 TDRPERPCKPLLTLGLDYTGISWKDKVADLRLKMAERNVVWFVVTALDEIAWLLHLRGSD 850
TDRPERPCKPLL LGLDYTGISWKDKVADLRLKMAERNVVWFVVTALDEIAWL +LRGSD
Sbjct: 113 TDRPERPCKPLLALGLDYTGISWKDKVADLRLKMAERNVVWFVVTALDEIAWLFNLRGSD 172
Query: 851 VEHNPVFFSYAIIGLETIMLFIDGD 925
VEHNPVFFSYAIIGLETIMLFIDGD
Sbjct: 173 VEHNPVFFSYAIIGLETIMLFIDGD 197
Score = 72.8 bits (177), Expect = 4e-13
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +1
Query: 190 RNRRQNGSKGNFRAASAAETSHEELGVCDRTNPGLHHPIGRRPP 321
R RRQ+GSKGN R ASAA TSHEE VCDRT+PGLH+PIGR PP
Sbjct: 9 RVRRQDGSKGNLRVASAAATSHEEHRVCDRTDPGLHYPIGRCPP 52
>ref|XP_549245.2| PREDICTED: similar to Xaa-Pro aminopeptidase 2 precursor (X-Pro
aminopeptidase 2) (Membrane-bound aminopeptidase P)
(Membrane-bound APP) (Membrane-bound AmP) (mAmP)
(Aminoacylproline aminopeptidase) [Canis familiaris].
Length = 890
Score = 187 bits (475), Expect = 1e-47
Identities = 98/236 (41%), Positives = 145/236 (61%), Gaps = 3/236 (1%)
Frame = +2
Query: 221 TSELLRQLRQAMKNLEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAII 400
T+ L LRQ M N + + AYIIP DAH SEYI D RRA+++GF GSAGTA++
Sbjct: 264 TTAQLTALRQQMHN-----QSLSAYIIPETDAHMSEYIGKRDKRRAWITGFTGSAGTAVV 318
Query: 401 TEEHAAMWTDGRYFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIP 580
+ A +WTD RY+ QA +QMD NW L K D + WL++ +P G VG DP +
Sbjct: 319 SMGKAGLWTDSRYWTQAERQMDCNWELHKE--VDITSIVTWLLAEVPAGGHVGFDPFLFS 376
Query: 581 TDYWKKMAKVLRSAGHHLVPVKENLVDKIW-TDRPERPCKPLLTLGLDYTGISWKDKVAD 757
WK L+++ LV + +NLVD W +++P P +P+ L +TG +WK+KV+D
Sbjct: 377 IGSWKSYYTALKNSNIQLVSITDNLVDLAWGSEKPLFPSQPIYALKEAFTGSTWKEKVSD 436
Query: 758 LRLKMAE--RNVVWFVVTALDEIAWLLHLRGSDVEHNPVFFSYAIIGLETIMLFID 919
+R +M + + +++ALDE AWL +LRGSD+ +NP F+SY ++ +I LF++
Sbjct: 437 IRSQMQKHRKGPTAVLLSALDETAWLFNLRGSDIPYNPFFYSYTLLTDSSIRLFVN 492
Database: RefSeq49_CP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,874,504
Number of sequences in database: 33,336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 41,651,009
Number of extensions: 1183968
Number of successful extensions: 3375
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 3371
Number of HSP's successfully gapped: 6
Length of query: 308
Length of database: 18,874,504
Length adjustment: 102
Effective length of query: 206
Effective length of database: 15,474,232
Effective search space: 3187691792
Effective search space used: 3187691792
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Animal-Genome cDNA 20110601C-014719
Search to RefSeqBP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014719
(925 letters)
Database: RefSeq49_BP.fasta
33,088 sequences; 17,681,374 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001069070.1| xaa-Pro aminopeptidase 1 [Bos taurus]. 485 e-137
Alignment gi|NP_001192484.1| xaa-Pro aminopeptidase 2 [Bos taurus]. 191 8e-49
Alignment gi|XP_002699561.1| PREDICTED: X-prolyl aminopeptidase 2, membra... 191 8e-49
>ref|NP_001069070.1| xaa-Pro aminopeptidase 1 [Bos taurus].
Length = 623
Score = 485 bits (1249), Expect = e-137
Identities = 231/240 (96%), Positives = 239/240 (99%)
Frame = +2
Query: 206 MAPKVTSELLRQLRQAMKNLEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSA 385
MAPK+TSELLRQLRQAM+NLEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSA
Sbjct: 1 MAPKITSELLRQLRQAMRNLEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSA 60
Query: 386 GTAIITEEHAAMWTDGRYFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVD 565
GTAI+TEEHAAMWTDGRYFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVD
Sbjct: 61 GTAIVTEEHAAMWTDGRYFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVD 120
Query: 566 PLIIPTDYWKKMAKVLRSAGHHLVPVKENLVDKIWTDRPERPCKPLLTLGLDYTGISWKD 745
PLIIPTDYWKKMAKVLRSAGHHL+PVK+NLVDKIWTDRPERPCKPL+TLGLDYTGISWKD
Sbjct: 121 PLIIPTDYWKKMAKVLRSAGHHLIPVKDNLVDKIWTDRPERPCKPLITLGLDYTGISWKD 180
Query: 746 KVADLRLKMAERNVVWFVVTALDEIAWLLHLRGSDVEHNPVFFSYAIIGLETIMLFIDGD 925
KVADLRLKMAERNVVWFVVTALDEIAWL +LRGSDVEHNPVFFSYAI+GLETIMLFIDGD
Sbjct: 181 KVADLRLKMAERNVVWFVVTALDEIAWLFNLRGSDVEHNPVFFSYAILGLETIMLFIDGD 240
>ref|NP_001192484.1| xaa-Pro aminopeptidase 2 [Bos taurus].
Length = 673
Score = 191 bits (485), Expect = 8e-49
Identities = 101/234 (43%), Positives = 148/234 (63%), Gaps = 3/234 (1%)
Frame = +2
Query: 221 TSELLRQLRQAMKNLEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAII 400
T+ L LRQ M T+ + AYI+P DAH SEYI D RRA+++GF GSAG A++
Sbjct: 49 TTAQLTALRQQM-----YTQNLSAYIVPDTDAHMSEYIGEYDQRRAWITGFTGSAGVAVV 103
Query: 401 TEEHAAMWTDGRYFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIP 580
T E A++WTD RY+ QA +QMD NW L K + TP WL++ +P G+RVGVDP +
Sbjct: 104 TMEKASLWTDSRYWTQAERQMDCNWELHK-EVGTTPI-VTWLLTEIPVGARVGVDPFLFS 161
Query: 581 TDYWKKMAKVLRSAGHHLVPVKENLVDKIW-TDRPERPCKPLLTLGLDYTGISWKDKVAD 757
+ W+ K L+ + LV + NLVD +W ++RP P +P+ L +TG +W++KVA
Sbjct: 162 INSWESYDKALQDSDRELVSITVNLVDLVWGSERPPVPSEPIYALQEAFTGSTWQEKVAG 221
Query: 758 LRLKMAERN--VVWFVVTALDEIAWLLHLRGSDVEHNPVFFSYAIIGLETIMLF 913
+R +M + + +++ALDE AWL +LRGSD+ +NP F+SY ++ +I LF
Sbjct: 222 IRSQMQKHHKAPTAVLLSALDETAWLFNLRGSDIPYNPFFYSYTLLTDSSIRLF 275
>ref|XP_002699561.1| PREDICTED: X-prolyl aminopeptidase 2, membrane-bound-like [Bos
taurus].
Length = 673
Score = 191 bits (485), Expect = 8e-49
Identities = 101/234 (43%), Positives = 148/234 (63%), Gaps = 3/234 (1%)
Frame = +2
Query: 221 TSELLRQLRQAMKNLEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAII 400
T+ L LRQ M T+ + AYI+P DAH SEYI D RRA+++GF GSAG A++
Sbjct: 49 TTAQLTALRQQM-----YTQNLSAYIVPDTDAHMSEYIGEYDQRRAWITGFTGSAGVAVV 103
Query: 401 TEEHAAMWTDGRYFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIP 580
T E A++WTD RY+ QA +QMD NW L K + TP WL++ +P G+RVGVDP +
Sbjct: 104 TMEKASLWTDSRYWTQAERQMDCNWELHK-EVGTTPI-VTWLLTEIPVGARVGVDPFLFS 161
Query: 581 TDYWKKMAKVLRSAGHHLVPVKENLVDKIW-TDRPERPCKPLLTLGLDYTGISWKDKVAD 757
+ W+ K L+ + LV + NLVD +W ++RP P +P+ L +TG +W++KVA
Sbjct: 162 INSWESYDKALQDSDRELVSITVNLVDLVWGSERPPVPSEPIYALQEAFTGSTWQEKVAG 221
Query: 758 LRLKMAERN--VVWFVVTALDEIAWLLHLRGSDVEHNPVFFSYAIIGLETIMLF 913
+R +M + + +++ALDE AWL +LRGSD+ +NP F+SY ++ +I LF
Sbjct: 222 IRSQMQKHHKAPTAVLLSALDETAWLFNLRGSDIPYNPFFYSYTLLTDSSIRLF 275
Database: RefSeq49_BP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 17,681,374
Number of sequences in database: 33,088
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 39,990,939
Number of extensions: 1150474
Number of successful extensions: 3382
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 3375
Number of HSP's successfully gapped: 3
Length of query: 308
Length of database: 17,681,374
Length adjustment: 102
Effective length of query: 206
Effective length of database: 14,306,398
Effective search space: 2947117988
Effective search space used: 2947117988
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014719
(925 letters)
Database: RefSeq49_SP.fasta
24,897 sequences; 11,343,932 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001004048.1| xaa-Pro aminopeptidase 2 precursor [Sus scro... 187 5e-48
>ref|NP_001004048.1| xaa-Pro aminopeptidase 2 precursor [Sus scrofa].
Length = 673
Score = 187 bits (476), Expect = 5e-48
Identities = 99/234 (42%), Positives = 143/234 (61%), Gaps = 3/234 (1%)
Frame = +2
Query: 221 TSELLRQLRQAMKNLEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAII 400
T+ L LR+ M +T+ + AYIIP DAH SEYI CD RRA+++GF GSAG A++
Sbjct: 49 TTAQLTALREQM-----LTQNLSAYIIPDTDAHMSEYIGECDQRRAWITGFIGSAGIAVV 103
Query: 401 TEEHAAMWTDGRYFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIP 580
TE AA+WTD RY+ QA +QMD NW L K T WL++ +P G RVG DP +
Sbjct: 104 TERKAALWTDSRYWTQAERQMDCNWELHKE--VSTGHIVTWLLTEIPVGGRVGFDPFLFS 161
Query: 581 TDYWKKMAKVLRSAGHHLVPVKENLVDKIW-TDRPERPCKPLLTLGLDYTGISWKDKVAD 757
D W+ L+ A LV + NLVD +W ++RP P P+ L + G +W++KV++
Sbjct: 162 IDSWESYDVALQDADRELVSITVNLVDLVWGSERPPLPNAPIYALQEAFAGSTWQEKVSN 221
Query: 758 LRLKMAERN--VVWFVVTALDEIAWLLHLRGSDVEHNPVFFSYAIIGLETIMLF 913
+R +M + + +++ALDE AWL +LR SD+ +NP F+SY ++ +I LF
Sbjct: 222 IRSQMQKHHERPTAVLLSALDETAWLFNLRSSDIPYNPFFYSYTLLTDSSIRLF 275
Database: RefSeq49_SP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 11,343,932
Number of sequences in database: 24,897
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 25,736,599
Number of extensions: 737783
Number of successful extensions: 2181
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 2178
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 11,343,932
Length adjustment: 99
Effective length of query: 209
Effective length of database: 8,879,129
Effective search space: 1855737961
Effective search space used: 1855737961
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)
Search to RefSeqMP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014719
(925 letters)
Database: RefSeq49_MP.fasta
30,036 sequences; 15,617,559 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_573479.2| xaa-Pro aminopeptidase 1 [Mus musculus]. 478 e-135
Alignment gi|NP_573476.2| X-prolyl aminopeptidase (aminopeptidase P) 2, m... 185 5e-47
>ref|NP_573479.2| xaa-Pro aminopeptidase 1 [Mus musculus].
Length = 623
Score = 478 bits (1230), Expect = e-135
Identities = 229/240 (95%), Positives = 236/240 (98%)
Frame = +2
Query: 206 MAPKVTSELLRQLRQAMKNLEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSA 385
MAPKVTSELLRQLRQAM+N EYV EPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSA
Sbjct: 1 MAPKVTSELLRQLRQAMRNSEYVAEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSA 60
Query: 386 GTAIITEEHAAMWTDGRYFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVD 565
GTAIITEEHAAMWTDGRYFLQAAKQMD+NWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVD
Sbjct: 61 GTAIITEEHAAMWTDGRYFLQAAKQMDNNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVD 120
Query: 566 PLIIPTDYWKKMAKVLRSAGHHLVPVKENLVDKIWTDRPERPCKPLLTLGLDYTGISWKD 745
PLIIPTDYWKKMAKVLRSAGHHLVPVKENLVDKIWTDRPERPCKPLLTLGLDYTGISWK+
Sbjct: 121 PLIIPTDYWKKMAKVLRSAGHHLVPVKENLVDKIWTDRPERPCKPLLTLGLDYTGISWKE 180
Query: 746 KVADLRLKMAERNVVWFVVTALDEIAWLLHLRGSDVEHNPVFFSYAIIGLETIMLFIDGD 925
KVADLRLKMAER++ WFVVTALDEIAWL +LRGSDVEHNPVFFSYAI+GLETIMLFIDGD
Sbjct: 181 KVADLRLKMAERSIAWFVVTALDEIAWLFNLRGSDVEHNPVFFSYAIVGLETIMLFIDGD 240
>ref|NP_573476.2| X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound
isoform 1 [Mus musculus].
Length = 674
Score = 185 bits (469), Expect = 5e-47
Identities = 103/262 (39%), Positives = 149/262 (56%), Gaps = 6/262 (2%)
Frame = +2
Query: 152 EPNEVTRSGYPGVGTDGRMAPKV---TSELLRQLRQAMKNLEYVTEPIQAYIIPSGDAHQ 322
EP + R T P T+ L LRQ M+ T + AYIIP DAH
Sbjct: 24 EPKYLGREDVRNCSTSPERLPVTAVNTTMRLAALRQQME-----TWNLSAYIIPDTDAHM 78
Query: 323 SEYIAPCDCRRAFVSGFDGSAGTAIITEEHAAMWTDGRYFLQAAKQMDSNWTLMKMGLKD 502
SEYI D RR ++SGF GSAGTA++T AA+WTD RY+ QA +QMD NW L K
Sbjct: 79 SEYIGKPDKRREWISGFTGSAGTAVVTMGKAAVWTDSRYWTQAERQMDCNWELHKE--VS 136
Query: 503 TPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLRSAGHHLVPVKENLVDKIW-TDR 679
+ W+++ +P+G VG DP + D WK + + + HL+ V NLVD W ++R
Sbjct: 137 ISSIVAWILAEVPDGQNVGFDPFLFSVDSWKNYDQGFQDSSRHLLSVTTNLVDVAWGSER 196
Query: 680 PERPCKPLLTLGLDYTGISWKDKVADLRLKMAE--RNVVWFVVTALDEIAWLLHLRGSDV 853
P P +P+ L ++TG +W++KV+ +R M + +++ALDE AWL +LR SD+
Sbjct: 197 PPVPSQPIYALPKEFTGSTWQEKVSAVRSYMEHHAKTPTGVLLSALDETAWLFNLRSSDI 256
Query: 854 EHNPVFFSYAIIGLETIMLFID 919
+NP F+SYA++ +I LF++
Sbjct: 257 PYNPFFYSYALLTNSSIRLFVN 278
Database: RefSeq49_MP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 15,617,559
Number of sequences in database: 30,036
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 34,742,662
Number of extensions: 985245
Number of successful extensions: 2911
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2908
Number of HSP's successfully gapped: 2
Length of query: 308
Length of database: 15,617,559
Length adjustment: 101
Effective length of query: 207
Effective length of database: 12,583,923
Effective search space: 2604872061
Effective search space used: 2604872061
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel49
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014719
(925 letters)
Database: RefSeq49_HP.fasta
32,964 sequences; 18,297,164 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001161076.1| xaa-Pro aminopeptidase 1 isoform 2 [Homo sap... 550 e-157
Alignment gi|NP_065116.3| xaa-Pro aminopeptidase 1 isoform 1 [Homo sapien... 550 e-157
Alignment gi|NP_003390.4| xaa-Pro aminopeptidase 2 precursor [Homo sapien... 185 6e-47
>ref|NP_001161076.1| xaa-Pro aminopeptidase 1 isoform 2 [Homo sapiens].
Length = 642
Score = 550 bits (1418), Expect = e-157
Identities = 268/283 (94%), Positives = 274/283 (96%)
Frame = +2
Query: 77 MAASRKAPRVRANYQDFQLKNLRIIEPNEVTRSGYPGVGTDGRMAPKVTSELLRQLRQAM 256
MAASRK PRVR N+QDFQL+NLRIIEPNEVT SG GV TDGRM PKVTSELLRQLRQAM
Sbjct: 1 MAASRKPPRVRVNHQDFQLRNLRIIEPNEVTHSGDTGVETDGRMPPKVTSELLRQLRQAM 60
Query: 257 KNLEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAIITEEHAAMWTDGR 436
+N EYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAIITEEHAAMWTDGR
Sbjct: 61 RNSEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAIITEEHAAMWTDGR 120
Query: 437 YFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLR 616
YFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLR
Sbjct: 121 YFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLR 180
Query: 617 SAGHHLVPVKENLVDKIWTDRPERPCKPLLTLGLDYTGISWKDKVADLRLKMAERNVVWF 796
SAGHHL+PVKENLVDKIWTDRPERPCKPLLTLGLDYTGISWKDKVADLRLKMAERNV+WF
Sbjct: 181 SAGHHLIPVKENLVDKIWTDRPERPCKPLLTLGLDYTGISWKDKVADLRLKMAERNVMWF 240
Query: 797 VVTALDEIAWLLHLRGSDVEHNPVFFSYAIIGLETIMLFIDGD 925
VVTALDEIAWL +LRGSDVEHNPVFFSYAIIGLETIMLFIDGD
Sbjct: 241 VVTALDEIAWLFNLRGSDVEHNPVFFSYAIIGLETIMLFIDGD 283
>ref|NP_065116.3| xaa-Pro aminopeptidase 1 isoform 1 [Homo sapiens].
Length = 666
Score = 550 bits (1418), Expect = e-157
Identities = 268/283 (94%), Positives = 274/283 (96%)
Frame = +2
Query: 77 MAASRKAPRVRANYQDFQLKNLRIIEPNEVTRSGYPGVGTDGRMAPKVTSELLRQLRQAM 256
MAASRK PRVR N+QDFQL+NLRIIEPNEVT SG GV TDGRM PKVTSELLRQLRQAM
Sbjct: 1 MAASRKPPRVRVNHQDFQLRNLRIIEPNEVTHSGDTGVETDGRMPPKVTSELLRQLRQAM 60
Query: 257 KNLEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAIITEEHAAMWTDGR 436
+N EYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAIITEEHAAMWTDGR
Sbjct: 61 RNSEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAIITEEHAAMWTDGR 120
Query: 437 YFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLR 616
YFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLR
Sbjct: 121 YFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIPTDYWKKMAKVLR 180
Query: 617 SAGHHLVPVKENLVDKIWTDRPERPCKPLLTLGLDYTGISWKDKVADLRLKMAERNVVWF 796
SAGHHL+PVKENLVDKIWTDRPERPCKPLLTLGLDYTGISWKDKVADLRLKMAERNV+WF
Sbjct: 181 SAGHHLIPVKENLVDKIWTDRPERPCKPLLTLGLDYTGISWKDKVADLRLKMAERNVMWF 240
Query: 797 VVTALDEIAWLLHLRGSDVEHNPVFFSYAIIGLETIMLFIDGD 925
VVTALDEIAWL +LRGSDVEHNPVFFSYAIIGLETIMLFIDGD
Sbjct: 241 VVTALDEIAWLFNLRGSDVEHNPVFFSYAIIGLETIMLFIDGD 283
>ref|NP_003390.4| xaa-Pro aminopeptidase 2 precursor [Homo sapiens].
Length = 674
Score = 185 bits (469), Expect = 6e-47
Identities = 99/234 (42%), Positives = 147/234 (62%), Gaps = 3/234 (1%)
Frame = +2
Query: 221 TSELLRQLRQAMKNLEYVTEPIQAYIIPSGDAHQSEYIAPCDCRRAFVSGFDGSAGTAII 400
T+ L LRQ M+ T+ + AYIIP DAH +EYI D RRA+++GF GSAGTA++
Sbjct: 50 TTMSLTALRQQMQ-----TQNLSAYIIPGTDAHMNEYIGQHDERRAWITGFTGSAGTAVV 104
Query: 401 TEEHAAMWTDGRYFLQAAKQMDSNWTLMKMGLKDTPTQEDWLVSVLPEGSRVGVDPLIIP 580
T + AA+WTD RY+ QA +QMD NW L K + TP WL++ +P G RVG DP ++
Sbjct: 105 TMKKAAVWTDSRYWTQAERQMDCNWELHK-EVGTTPI-VTWLLTEIPAGGRVGFDPFLLS 162
Query: 581 TDYWKKMAKVLRSAGHHLVPVKENLVDKIW-TDRPERPCKPLLTLGLDYTGISWKDKVAD 757
D W+ L+ + LV + NLVD +W ++RP P +P+ L +TG +W++KV+
Sbjct: 163 IDTWESYDLALQGSNRQLVSITTNLVDLVWGSERPPVPNQPIYALQEAFTGSTWQEKVSG 222
Query: 758 LRLKMAERNVV--WFVVTALDEIAWLLHLRGSDVEHNPVFFSYAIIGLETIMLF 913
+R +M + V +++AL+E AWL +LR SD+ +NP F+SY ++ +I LF
Sbjct: 223 VRSQMQKHQKVPTAVLLSALEETAWLFNLRASDIPYNPFFYSYTLLTDSSIRLF 276
Database: RefSeq49_HP.fasta
Posted date: Oct 17, 2011 1:42 PM
Number of letters in database: 18,297,164
Number of sequences in database: 32,964
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 40,954,942
Number of extensions: 1167711
Number of successful extensions: 3387
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 3384
Number of HSP's successfully gapped: 3
Length of query: 308
Length of database: 18,297,164
Length adjustment: 102
Effective length of query: 206
Effective length of database: 14,934,836
Effective search space: 3076576216
Effective search space used: 3076576216
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to Sscrofa10_2
BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20110601C-014719
(925 letters)
Database: Sscrofa_10.2.fasta
4582 sequences; 2,808,509,378 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Sscrofa_Chr14 293 9e-77
>Sscrofa_Chr14
|| Length = 153851969
Score = 293 bits (148), Expect = 9e-77
Identities = 148/148 (100%)
Strand = Plus / Minus
Query: 582 cagattactggaagaagatggccaaggttctgagaagcgctggccaccaccttgttcctg 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131130155 cagattactggaagaagatggccaaggttctgagaagcgctggccaccaccttgttcctg 131130096
Query: 642 tcaaggagaaccttgtggacaagatctggacagaccgccctgagcgtccgtgcaagcccc 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131130095 tcaaggagaaccttgtggacaagatctggacagaccgccctgagcgtccgtgcaagcccc 131130036
Query: 702 tcctcaccctgggcctggattacacagg 729
||||||||||||||||||||||||||||
Sbjct: 131130035 tcctcaccctgggcctggattacacagg 131130008
Score = 254 bits (128), Expect = 7e-65
Identities = 128/128 (100%)
Strand = Plus / Minus
Query: 195 cagacggcagaatggctccaaaggtaacttcagagctgcttcggcagctgagacaagcca 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131144238 cagacggcagaatggctccaaaggtaacttcagagctgcttcggcagctgagacaagcca 131144179
Query: 255 tgaagaacttggagtatgtgacagaaccaatccaggcctacatcatcccatcgggagacg 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131144178 tgaagaacttggagtatgtgacagaaccaatccaggcctacatcatcccatcgggagacg 131144119
Query: 315 cccaccag 322
||||||||
Sbjct: 131144118 cccaccag 131144111
Score = 218 bits (110), Expect = 4e-54
Identities = 110/110 (100%)
Strand = Plus / Minus
Query: 384 caggcacagccatcatcacagaagagcacgcggccatgtggacagatgggcgttactttc 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131134159 caggcacagccatcatcacagaagagcacgcggccatgtggacagatgggcgttactttc 131134100
Query: 444 tccaggctgccaagcagatggacagcaactggacactcatgaagatgggt 493
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131134099 tccaggctgccaagcagatggacagcaactggacactcatgaagatgggt 131134050
Score = 212 bits (107), Expect = 3e-52
Identities = 107/107 (100%)
Strand = Plus / Minus
Query: 3 tttccttccgcaggcccaccggtgatcagctggtctgcgctcctctgacgtgagcctggg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131204841 tttccttccgcaggcccaccggtgatcagctggtctgcgctcctctgacgtgagcctggg 131204782
Query: 63 cacgtcaccgccgaatggcagcctccagaaaggcaccgcgagtaagg 109
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131204781 cacgtcaccgccgaatggcagcctccagaaaggcaccgcgagtaagg 131204735
Score = 190 bits (96), Expect = 9e-46
Identities = 99/100 (99%)
Strand = Plus / Minus
Query: 726 caggcatctcctggaaagacaaggttgcagaccttcggttgaaaatggccgagaggaatg 785
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 131128312 caggcatctcctggaaagacaaggttgcggaccttcggttgaaaatggccgagaggaatg 131128253
Query: 786 tcgtgtggtttgtggtcactgccctggatgagattgcgtg 825
||||||||||||||||||||||||||||||||||||||||
Sbjct: 131128252 tcgtgtggtttgtggtcactgccctggatgagattgcgtg 131128213
Score = 186 bits (94), Expect = 1e-44
Identities = 94/94 (100%)
Strand = Plus / Minus
Query: 491 ggtctgaaggacacaccaactcaggaagactggctggtgagtgtacttcctgaaggatcc 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131130501 ggtctgaaggacacaccaactcaggaagactggctggtgagtgtacttcctgaaggatcc 131130442
Query: 551 agggttggtgtggacccattgatcattcctacag 584
||||||||||||||||||||||||||||||||||
Sbjct: 131130441 agggttggtgtggacccattgatcattcctacag 131130408
Score = 180 bits (91), Expect = 9e-43
Identities = 91/91 (100%)
Strand = Plus / Minus
Query: 107 agggcaaattaccaggattttcagctgaagaatttaagaataattgaacctaacgaggtg 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131198589 agggcaaattaccaggattttcagctgaagaatttaagaataattgaacctaacgaggtg 131198530
Query: 167 acacgttcaggatacccaggtgtaggaacag 197
|||||||||||||||||||||||||||||||
Sbjct: 131198529 acacgttcaggatacccaggtgtaggaacag 131198499
Score = 139 bits (70), Expect = 3e-30
Identities = 73/74 (98%)
Strand = Plus / Minus
Query: 834 atctccgaggatcagatgtggagcacaatccggtatttttctcctatgccatcataggac 893
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 131126093 atctccgaggatcagatgtggagcacaatccggtatttttctcctatgcaatcataggac 131126034
Query: 894 tagaaacaatcatg 907
||||||||||||||
Sbjct: 131126033 tagaaacaatcatg 131126020
Score = 137 bits (69), Expect = 1e-29
Identities = 69/69 (100%)
Strand = Plus / Minus
Query: 319 ccagagtgagtacattgctccatgtgattgtcggcgggccttcgtctctggattcgatgg 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131135650 ccagagtgagtacattgctccatgtgattgtcggcgggccttcgtctctggattcgatgg 131135591
Query: 379 ctctgcagg 387
|||||||||
Sbjct: 131135590 ctctgcagg 131135582
Database: Sscrofa_10.2.fasta
Posted date: Nov 16, 2011 10:34 AM
Number of letters in database: 2,808,509,378
Number of sequences in database: 4582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 25,283,372
Number of extensions: 140
Number of successful extensions: 140
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 140
Number of HSP's successfully gapped: 9
Length of query: 925
Length of database: 2,808,509,378
Length adjustment: 21
Effective length of query: 904
Effective length of database: 2,808,413,156
Effective search space: 2538805493024
Effective search space used: 2538805493024
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 29 (58.0 bits)