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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-000826

Length: 1,260

Sequence [FASTA format sequence]
TTTCCCTCCG CGTCAGCCCT GTTGGGCATG CGCACTACTT GTCCCCTCCA GACTGCCGGG
TTTTTCCCGC CCTTTACTGG CCTCTGGAGG AGGCTCAGAG TTCACGCCCC TCTATGGGGA
TACCTGCTCC GAGCCGGGGG ATGCGAGGAC TAGTAGGTGG CAGACGTCCT TCTGGTCCTG
AATCTTAAGG GACAAAGGAT AAACTCTAGG ACTGTTAACT CTTTGGAGAG CTGAGAGGCG
GGAAGAGGTA GTGTGGGAGG GGTCAGAGGT GAAAGGTCAG AGGGCTGCGA AGGGGGCGGA
GCGAGCCGGA GGCGGATGGC GGCTGCGGCG GCTCATCATC TTTGGCGGCA GAGGCGCTGA
AGCTGGGACG CGAGTCCGGC GCGTCCGGCA GTTGGAGGAG AGCGGCGGCC GCTCCCAACA
TGCACAGTCT GGCGACGGCT GCGCCTGTGC CTACTGCACT GGCTCAAGTG GATAGAGAAA
AGATCTATCA GTGGATCAAT GAGCTGTCCA GTCCTGAAAC AAGGGAAAAT GCTTTGCTGG
AGCTAAGTAA GAAGCGAGAA TCTGTTCCTG ACCTTGCACC CATGCTGTGG CATTCATTTG
GTACTATTGC AGCACTTTTA CAGGAAATTG TAAATATTTA CCCATCTATC AACCCACCCA
CCTTGACAGC ACACCAATCT AACAGAGTTT GCAACGCTCT GGCATTACTG CAATGTGTGG
CATCACACCC AGAAACCAGG TCAGCATTTC TTGCAGCACA CATCCCACTT TTTTTGTACC
CCTTTTTGCA CACTGTCAGC AAAACACGTC CCTTTGAATA TCTTCGGCTA ACCAGTCTTG
GAGTTATTGG GGCCCTGGTA AAAACAGATG AGCAGGAAGT AATCAACTTC TTATTGACAA
CAGAAATTAT CCCTTTGTGT TTGCGCATTA TGGAATCTGG AAGTGAACTT TCTAAAACGG
TTGCCACATT CATCCTCCAG AAGATCCTCT TAGATGACAC TGGTTTGGCT TATATATGCC
AGACATATGA GCGTTTCTCC CATGTTGCCA TGATCTTGGG TAAGAGGGTC CTGCAGCTAT
CCAAAGAGCC TTCTGCCCGT CTGCTGAAGC ATGTAGTAAG ATGCTACCTT CGACTCTCAG
ATAATCCCAG GGCACGTGAA GCGCTCAGGC AATGCCTCCC TGACCAGCTG AAGGACACAA
ACTTCGCCCA GGTGCTAAAA GATGACACCA CCACAAAACG CTGGGCTGCA CAACTGGTAA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinRQCD1cell differentiation protein RCD1 homolog [Homo sapiens]. 516e-146O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinRqcd1cell differentiation protein RCD1 homolog [Mus musculus]. 516e-146O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC610449PREDICTED: similar to rcd1 (required for cell differentiation) homolog 1 (S. pombe) (predicted) [Canis familiaris]. 581e-166


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinRQCD1cell differentiation protein RCD1 homolog [Bos taurus]. 516e-146O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100153939PREDICTED: cell differentiation protein RCD1 homolog [Sus scrofa]. 516e-146O


Assembly Members: 8      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
CBLT10001B03CBLT1_0001_B03.bHX211763 
CLNT10114D03CLNT1_0114_D03.bHX220229 
ILNT10023G10ILNT1_0023_G10.bHX228513 
KDN010084G04KDN01_0084_G04.bFS677128 
LVRM10052C08LVRM1_0052_C08.bBP450194 AK394153
PST010005D06PST01_0005_D06.b  
PTG010092E09PTG01_0092_E09.bFS712072 
THY010026D06THY01_0026_D06.bBP163614 

  

SNPs: 2      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
467A500.714WSCAA/Q
G200.286CAG/Q
524A200.286WSAGA/R
G500.714AGG/R


Alignment:      TOP

20110601C-000826 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVRM1_0052_C08.b : nagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
ILNT1_0023_G10.b : nnnggcgagagtagaggccgtaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0026_D06.b : gggggacctaxxxxxxxxxxx
KDN01_0084_G04.b :
PST01_0005_D06.b :
CLNT1_0114_D03.b :
PTG01_0092_E09.b :
CBLT1_0001_B03.b :
20110601C-000826 : TTTCCCTCCGCGTCAGCCCTGTTGGGCATGCGCACTACTTGTCCCCTCCAGACTGCCGGG
---------+---------+---------+---------+---------+---------+ 60
LVRM1_0052_C08.b : TTTCCCTCCGCGTCAGCCCTGTTGGGCATGCGCACTACTTGTCCCCTCCAGACTGCCGGG
ILNT1_0023_G10.b : xxxxgCTCCGCGTCAGCCCTGTTGGGCATGCGCACTACTTGTCCCCTCCAGACTGCCGGG
THY01_0026_D06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxt
KDN01_0084_G04.b : nnnncctgcggtggctctg
PST01_0005_D06.b : nggtatnntnnnnncc
CLNT1_0114_D03.b :
PTG01_0092_E09.b :
CBLT1_0001_B03.b :
20110601C-000826 : TTTTTCCCGCCCTTTACTGGCCTCTGGAGGAGGCTCAGAGTTCACGCCCCTCTATGGGGA
---------+---------+---------+---------+---------+---------+ 120
LVRM1_0052_C08.b : TTTTTCCCGCCCTTTACTGGCCTCTGGAGGAGGCTCAGAGTTCACGCCCCTCTATGGGGA
ILNT1_0023_G10.b : TTTTTCCCGCCCTTTACTGGCCTCTGGAGGAGGCTCAGAGTTCACGCCCCTCTATGGGGA
THY01_0026_D06.b : tttttcCCGCCCTTTACTGGCCTCTGGAGGAGGCTCAGAGTTCACGCCCCTCTATGGGGA
KDN01_0084_G04.b : gattttCCGCCCTTT*CTGGCCTCTGGAGGAGGCTCGGAGTTCACGCCCCTCTATGGGGA
PST01_0005_D06.b : tgcgttggctcggctttctggcctctggaGAGGCTCAGAGTTCACGCCCCTCTATGGGGA
CLNT1_0114_D03.b :
PTG01_0092_E09.b :
CBLT1_0001_B03.b :
20110601C-000826 : TACCTGCTCCGAGCCGGGGGATGCGAGGACTAGTAGGTGGCAGACGTCCTTCTGGTCCTG
---------+---------+---------+---------+---------+---------+ 180
LVRM1_0052_C08.b : TACCTGCTCCGAGCCGGGGGATGCGAGGACTAGTAGGTGGCAGACGTCCTTCTGGTCCTG
ILNT1_0023_G10.b : TACCTGCTCCGAGCCGGGGAATGCGAGGACTAGTAGGTGGCAGACGTCCTTCTGGTCCTG
THY01_0026_D06.b : TACCTGCTCCGAGCCGGGGGATGCGAGGACTAGTAGGTGGCAGACGTCCTTCTGGTCCTG
KDN01_0084_G04.b : TACCTGCTCCGAGCCGGGGGATGCGAGGACTAGTAGGTGGCAGACGTCCTTCTGGTCCTG
PST01_0005_D06.b : TACCTGCTCCGAGCCGGGGGATGCGAGGACTAGTAGGTGGCAGACGTCCTTCTGGTCCTG
CLNT1_0114_D03.b :
PTG01_0092_E09.b :
CBLT1_0001_B03.b :
20110601C-000826 : AATCTTAAGGGACAAAGGATAAACTCTAGGACTGTTAACTCTTTGGAGAGCTGAGAGGCG
---------+---------+---------+---------+---------+---------+ 240
LVRM1_0052_C08.b : AATCTTAAGGGACAAAGGATAAACTCTAGGACTGTTAACTCTTTGGAGAGCTGAGAGGCG
ILNT1_0023_G10.b : AATCTTAAGGGACAAAGGATAAACTCTAGGACTGTTAACTCTTTGGAGAGCTGAGAGGCG
THY01_0026_D06.b : AATCTTAAGGGACAAAGGATAAACTCTAGGACTGTTAACTCTTTGGAGAGCTGAGAGGCG
KDN01_0084_G04.b : AATCTTAAGGGACAAAGGATAAACTCTAGGACTGTTAACTCTTTGGAGAGCTGAGAGGCG
PST01_0005_D06.b : AATCTTAAGGGACAAAGGATAAACTCTAGGACTGTTAACTCTTTGGAGAGCTGAGAGGCG
CLNT1_0114_D03.b : nnnnccgttctgcgntcgxxxxxxxxxxxxxxxx
PTG01_0092_E09.b : nnnnnnnnnnnnnnnnnnn
CBLT1_0001_B03.b :
20110601C-000826 : GGAAGAGGTAGTGTGGGAGGGGTCAGAGGTGAAAGGTCAGAGGGCTGCGAAGGGGGCGGA
---------+---------+---------+---------+---------+---------+ 300
LVRM1_0052_C08.b : GGAAGAGGTAGTGTGGGAGGGGTCAGAGGTGAAAGGTCAGAGGGCTGCGAAGGGGGCGGA
ILNT1_0023_G10.b : GGAAGAGGTAGTGTGGGAGGGGTCAGAGGTGAAAGGTCAGAGGGCTGCGAAGGGGGCGGA
THY01_0026_D06.b : GGAAGAGGTAGTGTGGGAGGGGTCAGAGGTGAAAGGTCAGAGGGCTGCGAAGGGGGCGGA
KDN01_0084_G04.b : GGAAGAGGTAGTGTGGGAGGGGTCAGAGGTGAAAGGTCAGAGGGCTGCGAAGGGGGCGGA
PST01_0005_D06.b : GGAAGAGGTAGTGTGGGAGGGGTCAGAGGTGAAAGGTCAGAGGGCTGCGAAGGGGGCGGA
CLNT1_0114_D03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGAGGGCTGCGAAGGGGGCGGA
PTG01_0092_E09.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnxxxxxxxxxxGGGGGCGGA
CBLT1_0001_B03.b : ttttggcaggtag
20110601C-000826 : GCGAGCCGGAGGCGGATGGCGGCTGCGGCGGCTCATCATCTTTGGCGGCAGAGGCGCTGA
---------+---------+---------+---------+---------+---------+ 360
LVRM1_0052_C08.b : GCGAGCCGGAGGCGGATGGCGGCTGCGGCGGCTCATCATCTTTGGCGGCAGAGGCGCTGA
ILNT1_0023_G10.b : GCGAGCCGGAGGCGGATGGCGGCTGCGGCGGCTCATCATCTTTGGCGGCAGAGGCGCTGA
THY01_0026_D06.b : GCGAGCCGGAGGCGGATGGCGGCTGCGGCGGCTCATCATCTTTGGCGGCAGAGGCGCTGA
KDN01_0084_G04.b : GCGAGCCGGAGGCGGATGGCGGCTGCGGCGGCTCATCATCTTTGGCGGCAGAGGCGCTGA
PST01_0005_D06.b : GCGAGCCGGAGGCGGATGGCGGCTGCGGCGGCTCATCATCTTTGGCGGCAGAGGCGCTGA
CLNT1_0114_D03.b : GCGAGCCGGAGGCGGATGGCGGCTGCGGCGGCTCATCATCTTTGGCGGCAGAGGCGCTGA
PTG01_0092_E09.b : GCGAGCCGGAGGCGGATGGCGGCTGCGGCGGCTCATCATCTTTGGCGGCAGAGGCGCTGA
CBLT1_0001_B03.b : aggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGAGGCGCTGA
20110601C-000826 : AGCTGGGACGCGAGTCCGGCGCGTCCGGCAGTTGGAGGAGAGCGGCGGCCGCTCCCAACA
---------+---------+---------+---------+---------+---------+ 420
LVRM1_0052_C08.b : AGCTGGGACGCGAGTCCGGCGCGTCCGGCAGTTGGAGGAGAGCGGCGGCCGCTCCCAACA
ILNT1_0023_G10.b : AGCTGGGACGCGAGTCCGGCGCGTCCGGCAGTTGGAGGAGAGCGGCGGCCGCTCCCAACA
THY01_0026_D06.b : AGCTGGGACGCGAGTCCGGCGCGTCCGGCAGTTGGAGGAGAGCGGCGGCCGCTCCCAACA
KDN01_0084_G04.b : AGCTGGGACGCGAGTCCGGCGCGTCCGGCAGTTGGAGGAGAGCGGCGGCCGCTCCCAACA
PST01_0005_D06.b : AGCTGGGACGCGAGTCCGGCGCGTCCGGCAGTTGGAGGAGAGCGGCGGCCGCTCCCAACA
CLNT1_0114_D03.b : AGCTGGGACGCGAGTCCGGCGCGTCCGGCAGTTGGAGGAGAGCGGCGGCCGCTCCCAACA
PTG01_0092_E09.b : AGCTGGGACGCGAGTCCGGCGCGTCCGGCAGTTGGAGGAGAGCGGCGGCCGCTCCCAACA
CBLT1_0001_B03.b : AGCTGGGACGCGAGTCCGGCGCGTCCGGCAGTTGGAGGAGAGCGGCGGCCGCTCCCAACA
20110601C-000826 : TGCACAGTCTGGCGACGGCTGCGCCTGTGCCTACT*GCACTGGCTCAAGTGGATAGAGAA
---------+---------+---------+---------+---------+---------+ 479
LVRM1_0052_C08.b : TGCACAGTCTGGCGACGGCTGCGCCTGTGCCTACTTGCACTGGCTCAGGTGGATAGAGAA
ILNT1_0023_G10.b : TGCACAGTCTGGCGACGGCTGCGCCTGTGCCTACT*GCACTGGCTCAGGTGGATAGAGAA
THY01_0026_D06.b : TGCACAGTCTGGCGACGGCTGCGCCTGTGCCTACT*GCACTGGCTCAAGTGGATAGAGAA
KDN01_0084_G04.b : TGCACAGTCTGGCGACGGCTGCGCCTGTGCCTACT*GCACTGGCTCAAGTGGATAGAGAA
PST01_0005_D06.b : TGCACAGTCTGGCGACGGCTGCGCCTGTGCCTACT*GCACTGGCTCAAGTGGATAGAGAA
CLNT1_0114_D03.b : TGCACAGTCTGGCGACGGCTGCGCCTGTGCCTACT*GCACTGGCTCAGGTGGATAGAGAA
PTG01_0092_E09.b : TGCACAGTCTGGCGACGGCTGCGCCTGTGCCTACT*GCACTGGCTCAAGTGGATAGAGAA
CBLT1_0001_B03.b : TGCACAGTCTGGCGACGGCTGCGCCTGTGCCTACT*GCACTGGCTCAAGTGGATAGAGAA
20110601C-000826 : AAGATCTATCAGTGGATCAATGAGCTGTCCAGTCCTGAAACAAGGGAAAATGCTTTGCTG
---------+---------+---------+---------+---------+---------+ 539
LVRM1_0052_C08.b : AAGATCTATCAGTGGATCAGTGAGCTGTCCGGTCCTGAAACAAGACAAAATGCTTTGCTG
ILNT1_0023_G10.b : AAGATCTATCAGTGGATCAATGAGCTGTCCAGTCCTGAAACAAGAGAAAATGCTTTGCTG
THY01_0026_D06.b : AAGATCTATCAGTGGATCAATGAGCTGTCCAGTCCTGAAACAAGGGAAAATGCTTTGCTG
KDN01_0084_G04.b : AAGATCTATCAGTGGATCAATGAGCTGTCCAGTCCTGAAACAAGGGAAAATGCTTTGCTG
PST01_0005_D06.b : AAGATCTATCAGTGGATCAATGAGCTGTCCAGTCCTGAAACAAGGGAAAATGCTTTGCTG
CLNT1_0114_D03.b : AAGATCTATCAGTGGATCAATGAGCTGTCCAGTCCTGAAACAAGAGAAAATGCTTTGCTG
PTG01_0092_E09.b : AAGATCTATCAGTGGATCAATGAGCTGTCCAGTCCTGAAACAAGGGAAAATGCTTTGCTG
CBLT1_0001_B03.b : AAGATCTATCAGTGGATCAATGAGCTGTCCAGTCCTGAAACAAGGGAAAATGCTTTGCTG
20110601C-000826 : GAGCTAAGTAAGAAGCGAGAATCTGTTCCTGACCTTGCACCCATGCTGTGGCATTCATTT
---------+---------+---------+---------+---------+---------+ 599
LVRM1_0052_C08.b : GACCTAAGTAAGTAGCGAGAATCTGTTCCTGACCTTGCACCCATGCCGTGGCATTCATTT
ILNT1_0023_G10.b : GAGCTAAGTAAGAAGCGAGAATCTGTTCCTGACCTTGCACCCATGCTGTGGCATTCATTT
THY01_0026_D06.b : GAGCTAAGTAAGAAGCGAGAATCTGTTCCTGACCTTGCACCCATGCTGTGGCATTCATTT
KDN01_0084_G04.b : GAGCTAAGTAAGAAGCGAGAATCTGTTCCTGACCTTGCACCCATGCTGTGGCATTCATTT
PST01_0005_D06.b : GAGCTAAGTAAGAAGCGAGAATCTGTTCCTGACCTTGCACCCATGCTGTGGCATTCATTT
CLNT1_0114_D03.b : GAGCTAAGTAAGAAGCGAGAATCTGTTCCTGACCTTGCACCCATGCTGTGGCATTCATTT
PTG01_0092_E09.b : GAGCTAAGTAAGAAGCGAGAATCTGTTCCTGACCTTGCACCCATGCTGTGGCATTCATTT
CBLT1_0001_B03.b : GAGCTAAGTAAGAAGCGAGAATCTGTTCCTGACCTTGCACCCATGCTGTGGCATTCATTT
20110601C-000826 : GGTACTATTGCAGCACTTTTACAGGAAATTGTAAATATTTACCCATCTATCAACCCACCC
---------+---------+---------+---------+---------+---------+ 659
LVRM1_0052_C08.b : GGcccattgcccccttttccaggaagtgttcatatttgcccaccagcagcctcccatttg
ILNT1_0023_G10.b : GGTACTATTGCAGCACTTTTACAGGAAATTGTAAATATTTACCCATCTATCAACCCACCC
THY01_0026_D06.b : GGTACTATTGCAGCACTTTTACAGGAAATTGTAAATATTTACCCATCTATCAACCCACCC
KDN01_0084_G04.b : GGTACTATTGCAGCACTTTTACAGGAAATTGTAAATATTTACCCATCTATCAACCCACCC
PST01_0005_D06.b : GGTACTATTGCAGCACTTTTACAGGAAATTGTAAATATTTACCCATCTATCAACCCACCC
CLNT1_0114_D03.b : GGTACTATTGCAGCACTTTTACAGGAAATTGTAAATATTTACCCATCTATCAACCCACCC
PTG01_0092_E09.b : GGTACTATTGCAGCACTTTTACAGGAAATTGTAAATATTTACCCATCTATCAACCCACCC
CBLT1_0001_B03.b : GGTACTATTGCAGCACTTTTACAGGAAATTGTAAATATTTACCCATCTATCAACCCACCC
20110601C-000826 : ACCTTGACAGCACACCAATCTAACAGAGTTTGCAACGCTCTGGCATTACTGCAATGTGTG
---------+---------+---------+---------+---------+---------+ 719
LVRM1_0052_C08.b : tatattctgcattttaagatattttgacagctcgtgtattatgctgggttgcgcgccctc
ILNT1_0023_G10.b : ACCTTGACAGCACACCAATCTAACAGAGTTTGCAACGCTCTGGCATTACTGCAATGTGTG
THY01_0026_D06.b : ACCTTGACAGCACACCAATCTAACAGAGTTTGCAACGCTCTGGCATTACTGCAATGTGTG
KDN01_0084_G04.b : ACCTTGACAGCACACCAATCTAACAGAGTTTGCAACGCTCTGGCATTACTGCAATGTGTG
PST01_0005_D06.b : ACCTTGACAGCACACCAATCTAACAGAGTTTGCAACGCTCTGGCATTACTGCAATGTGTG
CLNT1_0114_D03.b : ACCTTGACAGCACACCAATCTAACAGAGTTTGCAACGCTCTGGCATTACTGCAATGTGTG
PTG01_0092_E09.b : ACCTTGACAGCACACCAATCTAACAGAGTTTGCAACGCTCTGGCATTACTGGCATGTGTG
CBLT1_0001_B03.b : ACCTTGACAGCACACCAATCTAACAGAGTTTGCAACGCTCTGGCATTACTGCAATGTGTG
20110601C-000826 : GCATCACACCCAGAAACCAGGTCAGCATTTCTTGCAGCACACATCCCACTTTTTTTGTAC
---------+---------+---------+---------+---------+---------+ 779
LVRM1_0052_C08.b : cttcacctatttggctgtcttgggcatagtttcattgtttgattcctttctggcac
ILNT1_0023_G10.b : GCATCACACCCAGAAACCAGGTCAGCATTTCTTGCAGCACACATCCCACTTTTTTTGTAC
THY01_0026_D06.b : GCATCACACCCAGAAACCAGGTCAACATTTCTTGCAGCACACATCCCACTTTTTTTGTAC
KDN01_0084_G04.b : GCATCACACCCAGAAACCAGGTCAGCATTTCTTGCAGCACACATCCCACTTTTTTTGTAC
PST01_0005_D06.b : GCATCACACCCAGAAACCAGGTCAGCATTTCTTGCAGCACACATCCCACTTTTTTTGTAC
CLNT1_0114_D03.b : GCATCACACCCAGAAACCAGGTCAGCATTTCTTGCAGCACACATCCCACTTTTTTTGTAC
PTG01_0092_E09.b : GCATCACACCCAGAAACCAGGTCAGCATTTCTTGCAGCACACATCCCACTTTTTTTGTAC
CBLT1_0001_B03.b : GCATCACACCCAGAAACCAGGTCAGCATTTCTTGCAGCACACATCCCACTTTTTTTGTAC
20110601C-000826 : CCCTTTTTGCACACTGTCAGCAAAACACGTC*CCTTTGAATATCTTCGGCTAACCAGTCT
---------+---------+---------+---------+---------+---------+ 838
LVRM1_0052_C08.b :
ILNT1_0023_G10.b : CCCTTTTTGCACACTGTCAGCAAAACACGTCCCCTTTGAATATCTTCGGCTAACCAGTCT
THY01_0026_D06.b : CCCTTTTTGCACACTGTCAGCAAAACACGTC*CCTTTGAATATCTTCGGCTAACCAGTCT
KDN01_0084_G04.b : CCCTTTTTGCACACTGTCAGCAAAACACGTC*CCTTTGAATATCTTCGGCTAACCAGTCT
PST01_0005_D06.b : CCCTTTTTGCACACTGTCAGCAAAACACGTC*CCTTTGAATATCTTCGGCTAACCAGTCT
CLNT1_0114_D03.b : CCCTTTTTGCACACTGTCAGCAAAACACGTC*CCTTTGAATATCTTCGGCTAACCAGTCT
PTG01_0092_E09.b : CCCTTTTTGCACACTGTCAGCAAAACACGTCCCctttgaatatctcggctaaccagtcct
CBLT1_0001_B03.b : CCCTTTTTGCACACTGTCAGCAAAACACGTC*CCTTTGAATATCTTCGGCTAACCAGTCT
20110601C-000826 : TGGAGTTATTGGGGCCCTGGTAAAAA*CAGATGAGCAGGAAGTAATCAACTTCTTATTGA
---------+---------+---------+---------+---------+---------+ 897
LVRM1_0052_C08.b :
ILNT1_0023_G10.b : TGGAGTTATTGGGGCCCTGGTAAAAA*CAGATGAGCAGGAAGTAATCAACTTCTTTATGA
THY01_0026_D06.b : TGGAGTTATTGGGGCCCTGGTAAAAAACAGATGAGCAAGAAGTAATCAACTTCTTATTGA
KDN01_0084_G04.b : TGGAGTTATTGGGGCCCTGGTAAAAA*CAGATGAGCAGGAAGTAATCAACTTCTTATTGA
PST01_0005_D06.b : TGGAGTTATTGGGGCCCTGGTAAAAA*CAGATGAGCAGGAAGTAATCAACTTCTTATTGA
CLNT1_0114_D03.b : TGGAGTTATTGGGGCCCTGGTAAAAA*CAGATGAGCAGGAAGTAATCAACTTCTTATTGA
PTG01_0092_E09.b : gaagtattgggggccctgggtaaaacgattgaccggaaggtattcaccttcttatggcca
CBLT1_0001_B03.b : TGGAGTTATTGGGGCCCTGGTAAAAA*CAGATGAGCAGGAAGTAATCAACTTCTTATTGA
20110601C-000826 : CAACAGAAATTAT**CCCTTTGTGTTTGCGCATTATGGAATCTGGAAGTGAACT*TTCTA
---------+---------+---------+---------+---------+---------+ 954
LVRM1_0052_C08.b :
ILNT1_0023_G10.b : CAACAGAAATTAT**CCCTTTGTGTTTGCGCATTATGGAATCTGGAAGTGAACT*TTCTA
THY01_0026_D06.b : CAACAGAAAATTATCCCCTTTGTGTTTGCGCATTATGGAATCTGGgaagtggaaactttt
KDN01_0084_G04.b : CAACAGAAATTAT**CCCTTTGTGTTTGCGCATTATGGAATCTGGAAGTGAACTTTTCTA
PST01_0005_D06.b : CAACAGAAATTAT**CCCTTTGTGTTTGCGCATTATGGAATCTGGAAGTGAACT*TTCTA
CLNT1_0114_D03.b : CAACAGAAATTAT**CCCTTTGTGTTTGCGCATTATGGAATCTGGAAGTGAACT*TTCTA
PTG01_0092_E09.b : cggaaattatcccctggggtttgcccattatgaaacctgaaagtgactttctaaaaaggg
CBLT1_0001_B03.b : CAACAGAAATTAT**CCCTTTGTGTTTGCGCATTATGGAATCTGGAAGTGAACT*TTCTA
20110601C-000826 : AAACGGTTGCCACATTCATCCTCCAGAAGATCCTCTTAGATGACACTGGTTTGGCTTATA
---------+---------+---------+---------+---------+---------+ 1014
LVRM1_0052_C08.b :
ILNT1_0023_G10.b : AAACGGcccacacttaggggtctaatccaagctacggctgctgggctatgcgaaagcccc
THY01_0026_D06.b : ctaaaaacggggttgcccctttcatcctcccaaaagaatcctcttagatgacacttggtt
KDN01_0084_G04.b : AAACGGTTTGCACATTCATCCTCCAGAAGATCCTCTTAGATGACACTGGTTTGGCTTATA
PST01_0005_D06.b : AAACGGTTGCCACATTCATCCTCCAGAAGATCCTCTTAGATGACACTGGTTTGGCTTATA
CLNT1_0114_D03.b : AAACGGTTGCCACATTCATCCTCCAGAAGATCCTCTTAGATGACACTGGTTTGGCTTATA
PTG01_0092_E09.b : ttggcccatttctcccccccaaaaaatcctcttaaaaaaacccgggttgggcttaaatat
CBLT1_0001_B03.b : AAACGGTTGCCACATTCATCCTCCAGAAGATCCTCTTAGATGACACTGGTTTGGCTTATA
20110601C-000826 : TATGCCAGACATATGAGCGTTTCTCCCATGTTGCCATGATCTTGGGTAAGAGGGTCCTGC
---------+---------+---------+---------+---------+---------+ 1074
LVRM1_0052_C08.b :
ILNT1_0023_G10.b : agcaatgccagatcggaaccgaattctgcacctaaactaaggttataggcaataccgaat
THY01_0026_D06.b : tgggtttatatatgccagaacatatgaaccgttttctccccatgttggccatggattttt
KDN01_0084_G04.b : TATGCCAGACATATGAGCGTTTCTCCCATGTTGCCATGATCTTGGGTAAGATG*TCCTGC
PST01_0005_D06.b : TATGCCAGACATATGAGCGTTTCT*CCATGNNTGCATGATCTTGGGGTAGATGGTCCTGC
CLNT1_0114_D03.b : TATGCCAGACATATGAGCGTTTCTCCCATGTTGCCATGATCTTGGGTAAGATGGTCCTGC
PTG01_0092_E09.b : gcccaaaaaatgagcggttttccccatggttccctaaattttgggaaaaaagggccccgc
CBLT1_0001_B03.b : TATGCCAGACATATGAGCGTTTCTCCCATGTTGCCATGATCTTGGGTAAGAGGGTCCTGC
20110601C-000826 : AGCTATCCAAAGAGCCTTCTGCCCGTCTGCTGAAGCATGTAGTAAGATGCTACCTTCGAC
---------+---------+---------+---------+---------+---------+ 1134
LVRM1_0052_C08.b :
ILNT1_0023_G10.b : ccttacccccctgaacaacctctgggctcgaagttggaattgttttcctggcgcctggag
THY01_0026_D06.b : gggtaaaaaatgggcccttgcaactttttcccaaagaaaccctttctgcccccgtcctgg
KDN01_0084_G04.b : AGTTATCCAAAGAGC*TTCTGCCCGTCTGCTGAAcatgtantagatgctacttcgactct
PST01_0005_D06.b : AGCTATCCAAAGAGC*TTCTGCCCGTCTGCTGAAGCATGTANTAAGATGCTACCTTcgac
CLNT1_0114_D03.b : AGCTATCCAAAGAGCCTTCTGCCCGTCTGCTGAAGCATGTAGTAAGATGCTACCTTcgac
PTG01_0092_E09.b : cccatttccaaaaaaccttttcgccccctcggctagaccgggtaaaaaaaaacccccctt
CBLT1_0001_B03.b : AGCTATCCAAAGAGCCTTCTGCCCGTCTGCTGAAGCATGTAGTAAGATGCTACCTTCGAC
20110601C-000826 : TCTCAGATAATCCCAGGGCACGTGAAGCGCTCAGGCAATGCCTCCCTGACCAGCTGAAGG
---------+---------+---------+---------+---------+---------+ 1194
LVRM1_0052_C08.b :
ILNT1_0023_G10.b : ggaacctccaaaggattgctgataacaaaaaaaaaataaatttttttcacggaaagaacc
THY01_0026_D06.b : cttgaaaccttggtaagtaaaaaaatgccttacccttttcccacctctctccaaaaaaaa
KDN01_0084_G04.b : aaaatatccaagggccgtaagcgctcaggcatgcctcctggacactgaggaaacactttc
PST01_0005_D06.b : tctcagatatcccaggtaacattattaggattataggacttttgggaatactcggtggat
CLNT1_0114_D03.b : tctcagatattcccgggcacgtgaagcgctcaggcagtgcctccctgaccagctgaagga
PTG01_0092_E09.b : ccccccccaaaaacccccggaaaacatttttgggaaataaagaggcttttgggaaaaacc
CBLT1_0001_B03.b : TCTCAGATAATCCCAGGGCACGTGAAGCGCTCAGGCAATGCCTCCCTGACCAGCTGAAGG
20110601C-000826 : ACACAAACTTCGCCCAGGTGCTAAAAGATGACACCACCACAAAACGCTGGGCTGCACAAC
---------+---------+---------+---------+---------+---------+ 1254
LVRM1_0052_C08.b :
ILNT1_0023_G10.b : tgtccccttggaatttaatggaacgggttgccaatttctctcccaaagattccctaataa
THY01_0026_D06.b : ttcccccccaggggcccccgcggggaaaacgccgcctctccggggggcaaggggggcccc
KDN01_0084_G04.b : gccagggcttaaaatgaaccccaccaaacctggctgccaattgtaaaactgcagagggcg
PST01_0005_D06.b : ggaactccttccagggatagctccggttcttcnggaagggaagggtaaacttaattagct
CLNT1_0114_D03.b : cccaacctcgcccagttgcttaaagatgaccccccacaaacgctggctgcccactggtaa
PTG01_0092_E09.b : cccggggggaggggcccccccccccgggggggaattcccctttttttttggggggggggg
CBLT1_0001_B03.b : ACACAAACTTCGCCCAGGTGCTAAAAGATGACACCACCACAAAACGCTGGGCTGCACAAC
20110601C-000826 : TGGTAA......................................................
---------+---------+---------+---------+---------+---------+ 1260
LVRM1_0052_C08.b :
ILNT1_0023_G10.b : acctggttggctttatatgccaacaatgagaggttctctattgtgcctaatttgtggaaa
THY01_0026_D06.b : ctttccccccttgtaacaccccacgcccgttgtgtgaagaaggaggagaaac
KDN01_0084_G04.b : gtcccattcggcggtaccctgcccccaggatctcctgtccccccataaccccagtgggag
PST01_0005_D06.b : tgcgatccaacttgttattccttaaaactcgaagctgggatcggccggctccggaaaaaa
CLNT1_0114_D03.b : gaacctgcagaagggccggtcccgattcccgggtaaacccggcccccagggttccccctt
PTG01_0092_E09.b : gggggggaaacttttttttttttgtgggaaaaaaacacttttttatatttttttttaaaa
CBLT1_0001_B03.b : TGGTAAagaacctgcaaaagggcaggtcaccgatcccccggtataccctggcccctcagt
20110601C-000826 : ............................................................
---------+---------+---------+---------+---------+---------+ 1260
LVRM1_0052_C08.b :
ILNT1_0023_G10.b : agacccgcctatcaaaaaacctctctcccctctgaacggtaaaaaaact
THY01_0026_D06.b :
KDN01_0084_G04.b : gggggaacctggagaaactctgttttccaccggaaaaactcttttaatccggaaaggggg
PST01_0005_D06.b : ttataggtctgggacgagtgcctccgcctccccgggaaagcccattcgtactggggggca
CLNT1_0114_D03.b : gcccccccattacccccagttggggagggaggggaacccttaggaaaaccccggttttcc
PTG01_0092_E09.b : aaaaggaggggggggctcccttcgggcgcccaaaaaaaaaatatataataaatcctgggg
CBLT1_0001_B03.b : gatcctcccttgtcccctccaattatcccccaatttgggaaaggaagggggaaccccttg
20110601C-000826 : ............................................................
---------+---------+---------+---------+---------+---------+ 1260
LVRM1_0052_C08.b :
ILNT1_0023_G10.b :
THY01_0026_D06.b :
KDN01_0084_G04.b : ttcctgggggaaatcctcgggcctagaggtctcttcccaaaggcccaccgcttcccccgg
PST01_0005_D06.b : aaccctgattactttgggtgggggggggatattcttcccccgaaccaagggggctaaaaa
CLNT1_0114_D03.b : cgaagggataaacaaccttgtctatcctggaaaagggagggttcccctgggggaaacccc
PTG01_0092_E09.b : gggggggggggcccccccccccctcccccggggggggaaaaaccccccttttttaaccgg
CBLT1_0001_B03.b : agaaaacaactcaggtttttccgccaaccggaaaaaacaacctcatgctaatctgccctg
20110601C-000826 : ............................................................
---------+---------+---------+---------+---------+---------+ 1260
LVRM1_0052_C08.b :
ILNT1_0023_G10.b :
THY01_0026_D06.b :
KDN01_0084_G04.b : gtaccaagtttcgccaactctcccccccgggagggtccctcttgggagttctttt
PST01_0005_D06.b : attggttattcttttttt
CLNT1_0114_D03.b : ctcggcgccttggactggcccctcctccccgaaggggcctcaacggtcttcccccccggg
PTG01_0092_E09.b : gggggggggaaaaaaaacccgctgggtaccccccccgggggggggggggggggggggggg
CBLT1_0001_B03.b : gaaaaggggcaaggtattcccctgaggggtaacgcttccatctcaggtcgccttgggaac
20110601C-000826 : ............................................................
---------+---------+---------+---------+---------+---------+ 1260
LVRM1_0052_C08.b :
ILNT1_0023_G10.b :
THY01_0026_D06.b :
KDN01_0084_G04.b :
PST01_0005_D06.b :
CLNT1_0114_D03.b : ggttcaccaatgtgtttgcgcgccagacctctcccctcccccggggggggaggggacccc
PTG01_0092_E09.b : taatttttttttttcccccccccgagaataaaaatggggggggggggggaaaaaaaaaaa
CBLT1_0001_B03.b : tgggctccctttgctcacccaggaaaatgggtcccgaaaaagggttgtgctcccaggccc
20110601C-000826 : ............................................................
---------+---------+---------+---------+---------+---------+ 1260
LVRM1_0052_C08.b :
ILNT1_0023_G10.b :
THY01_0026_D06.b :
KDN01_0084_G04.b :
PST01_0005_D06.b :
CLNT1_0114_D03.b : ctttgtgggggacacgggtttttctccgaaaggtctctcccttttggtttttctaggggg
PTG01_0092_E09.b : aaaaaagggggggttgttaaatcacaccacccccctcgtgtgaaaaaaaaaaaaattctt
CBLT1_0001_B03.b : gggagtgtgtaacacccaaagtgttattggtccaggccaaaagaccctttccccacctct
20110601C-000826 : ............................................................
---------+---------+---------+---------+---------+---------+ 1260
LVRM1_0052_C08.b :
ILNT1_0023_G10.b :
THY01_0026_D06.b :
KDN01_0084_G04.b :
PST01_0005_D06.b :
CLNT1_0114_D03.b : gagttaannnntnnnnnnnagggaaaaaaccccgccacatcttatcctnnntcnnnnnnn
PTG01_0092_E09.b : cttcttttttttttt
CBLT1_0001_B03.b : ctacaaacatgtgagggagggaaaggttgtaaccacaccttt