[Help]

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-001038

Length: 1,385

Sequence [FASTA format sequence]
GTGTGCCTAC CCTACGCCGG CAGGCGCGGG TAACCCGTTG AACCCCATTC GTGATGGGGA
TCGGGGATTG CAATTATTCC CCATGAACGA GGAATTCCCA GTAAGTGCGG GTCATAAGCT
TGCGTTGATT AAGTCCCTGC CCTTTGTACA CACCGCCCGT CGCTACTACC GATTGGATGG
TTTAGTGAGG CCCTCGGATC GGCCCCGCCG GGGTCCTCCT CTCGCCAGGC GTCCTCGTGT
GAGTGACATC GTCTTTAAAC CCTGCGTGGC AATCCCTGAC GCACCGCCGT GATGCCCAGG
GAAGACAGGG CGACCTGGAA GTCCAACTAC TTCCTTAAGA TAATCCAACT TCTGGATGAT
TATCCGAAAT GCTTCATTGT GGGAGCAGAC AATGTGGGCT CCAAGCAGAT GCAGCAGATC
CGCATGTCTC TCCGCGGGAA AGCCGTGGTG CTGATGGGCA AGAACACCAT GATGCGCAAG
GCCATCCGAG GGCACCTGGA AAACAACCCA GCCCTGGAGA AACTGTTGCC TCACATCCGG
GGGAACGTGG GCTTTGTGTT CACCAAGGAG GACCTCACTG AGATCAGGGA CATGCTGCTG
GCCAATAAGG TGCCAGCTGC CGCCCGTGCT GGTGCCATAG CCCCATGCGA AGTCACTGTA
CCTGCCCAGA ACACTGGTCT GGGGCCTGAG AAGACCTCCT TCTTCCAGGC TTTAGGCATC
ACCACTAAAA TCTCCAGGGG CACCATTGAA ATCCTGAGTG ATGTGCAGCT GATTAAGACT
GGAGACAAAG TGGGAGCCAG TGAAGCCACG TTGCTGAACA TGTTGAACAT CTCCCCCTTC
TCCTTTGGGC TGATCATCCA GCAGGTGTTT GACAATGGCA GCATCTACAA CCCTGAAGTG
CTTGACATCA CCGAGGAAAC TCTGCATTCT CGCTTCCTGG AGGGTGTCCG CAATGTTGCC
AGCGTATGTC TGCAGATTGG TTACCCAACT GTTGCATCTG TACCCCATTC TATCATCAAT
GGGTACAAGC GGGTCCTGGC TTTGTCTGTG GAAACTGATT ACACCTTCCC ACTTGCTGAA
AAGGTCAAGG CCTTCTTGGC TGATCCATCT GCCTTTTGTG GCTGCTGCCC CTGTGGCTGC
AGCCACCACT TGCTGCTCCT GCTGCTGCTG CTGCAGCCCC AGCCAAGGTT GAAGCAAAAG
GAGGAATCCG AAGGAATTCG GAACAAGGAA ATTGGGATTT GGGTCTCTTT TGAATAAATT
TACCCAAAAA AGCAACCCAA AGTCCACCCG CCTTTTATTT TGGGAAAAAA AAAAAAAAAA
AAAAAGGGCT TTTCCTTTCT TAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAG
GGGGG


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinRPLP060S acidic ribosomal protein P0 [Homo sapiens]. 522e-148O
Contig/Assembly ProteinRPLP060S acidic ribosomal protein P0 [Homo sapiens]. 522e-148O
Contig/Assembly ProteinMRTO4mRNA turnover protein 4 homolog [Homo sapiens]. 521e-06O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinRplp060S acidic ribosomal protein P0 [Mus musculus]. 516e-146O
Contig/Assembly ProteinGm8730PREDICTED: 60S acidic ribosomal protein P0-like [Mus musculus]. 513e-145O
Contig/Assembly ProteinGm8730PREDICTED: 60S acidic ribosomal protein P0-like [Mus musculus]. 513e-145O
Contig/Assembly ProteinGm5633PREDICTED: mRNA turnover protein 4 homolog isoform 2 [Mus musculus]. 50.43e-06O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC609159PREDICTED: similar to 60S acidic ribosomal protein P0 (L10E) isoform 2 [Canis familiaris]. 523e-148O
Contig/Assembly ProteinRPLP0PREDICTED: similar to 60S acidic ribosomal protein P0 (L10E) isoform 1 [Canis familiaris]. 523e-148O
Contig/Assembly ProteinRPLP0PREDICTED: similar to 60S acidic ribosomal protein P0 (L10E) isoform 7 [Canis familiaris]. 523e-148O
Contig/Assembly ProteinRPLP0PREDICTED: similar to 60S acidic ribosomal protein P0 (L10E) isoform 6 [Canis familiaris]. 523e-148O
Contig/Assembly ProteinRPLP0PREDICTED: similar to 60S acidic ribosomal protein P0 (L10E) isoform 2 [Canis familiaris]. 523e-148O
Contig/Assembly ProteinLOC609159PREDICTED: similar to 60S acidic ribosomal protein P0 (L10E) isoform 14 [Canis familiaris]. 523e-148O
Contig/Assembly ProteinLOC609159PREDICTED: similar to 60S acidic ribosomal protein P0 (L10E) isoform 13 [Canis familiaris]. 523e-148O
Contig/Assembly ProteinLOC609159PREDICTED: similar to 60S acidic ribosomal protein P0 (L10E) isoform 12 [Canis familiaris]. 523e-148O
Contig/Assembly ProteinLOC609159PREDICTED: similar to 60S acidic ribosomal protein P0 (L10E) isoform 11 [Canis familiaris]. 523e-148O
Contig/Assembly ProteinLOC609320PREDICTED: similar to 60S acidic ribosomal protein P0 (L10E) isoform 1 [Canis familiaris]. 485e-137O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinRPLP060S acidic ribosomal protein P0 [Bos taurus]. 523e-148O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC10004969560S acidic ribosomal protein P0 [Sus scrofa]. 523e-149O


Assembly Members: 6      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
LNG010009F03LNG01_0009_F03.bBP438123 
LVR010030A02LVR01_0030_A02.bBP441039 
OVR010005E03OVR01_0005_E03.bBP143112 
OVRM10214B10OVRM1_0214_B10.bBP456361 AK395376
THY010202D09THY01_0202_D09.bBP163995 
UTR010069A08UTR01_0069_A08.bBP462852 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
660A300.600WSGTA/V
C200.400GTC/V


Alignment:      TOP

20110601C-001038 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
OVRM1_0214_B10.b : gagtttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LNG01_0009_F03.b :
OVR01_0005_E03.b :
LVR01_0030_A02.b :
THY01_0202_D09.b :
UTR01_0069_A08.b :
20110601C-001038 : .GTGTGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGG
---------+---------+---------+---------+---------+---------+ 59
OVRM1_0214_B10.b : xgtgtgcctaccctacgccggcaggcgcgggtaacccgttgaaccccattcgtgatgggg
LNG01_0009_F03.b :
OVR01_0005_E03.b :
LVR01_0030_A02.b :
THY01_0202_D09.b :
UTR01_0069_A08.b :
20110601C-001038 : ATCGGGGATTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCATAAGC
---------+---------+---------+---------+---------+---------+ 119
OVRM1_0214_B10.b : atcggggattgcaattattccccatgaacgaggaattcccagtaagtgcgggtcataagc
LNG01_0009_F03.b :
OVR01_0005_E03.b :
LVR01_0030_A02.b :
THY01_0202_D09.b :
UTR01_0069_A08.b :
20110601C-001038 : TTGCGTTGATTAAGTCCCTGCCCTTTGTACACACCGCCCGTCGCTACTACCGATTGGATG
---------+---------+---------+---------+---------+---------+ 179
OVRM1_0214_B10.b : ttgcgttgattaagtccctgccctttgtacacaccgcccgtcgctactaccgattggatg
LNG01_0009_F03.b : gctxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVR01_0005_E03.b : gggggcccctattttacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0030_A02.b : tttagggtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
THY01_0202_D09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0069_A08.b : gggtaggtgaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-001038 : GTTTAGTGAGGCCCTCGGATCGGCCCCGCCGGGGTCCTCCTCTCGCCAGGCGTCCTCGTG
---------+---------+---------+---------+---------+---------+ 239
OVRM1_0214_B10.b : gtttagtgaggccctcggatcggccccgccggggtcggccTCTCGCCAGGCGTCCTCGTG
LNG01_0009_F03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxcCTCCTCTCGCCAGGCGTCCTCGTG
OVR01_0005_E03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTCTCGCCAGGCGTCCTCGTG
LVR01_0030_A02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTCTCGCCAGGCGTCCTCGTG
THY01_0202_D09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTCTCGCCAGGCGTCCTCGTG
UTR01_0069_A08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTCTCGCCAGGCGTCCTCGTG
20110601C-001038 : TGAGTGACATCGTCTTTAAACCCTGCGTGGCAATCCCTGACGCACCGCCGTGATGCCCAG
---------+---------+---------+---------+---------+---------+ 299
OVRM1_0214_B10.b : TGAGTGACATCGTCTTTAAACCCTGCGTGGCAATCCCTGACGCACCGCCGTGATGCCCAG
LNG01_0009_F03.b : TGAGTGACATCGTCTTTAAACCCTGCGTGGCAATCCCTGACGCACCGCCGTGATGCCCAG
OVR01_0005_E03.b : TGAGTGACATCGTCTTTAAACCCTGCGTGGCAATCCCTGACGCACCGCCGTGATGCCCAG
LVR01_0030_A02.b : TGAGTGACATCGTCTTTAAACCCTGCGTGGCAATCCCTGACGCACCGCCGTGATGCCCAG
THY01_0202_D09.b : TGAGTGACATCGTCTTTAAACCCTGCGTGGCAATCCCTGACGCACCGCCGTGATGCCCAG
UTR01_0069_A08.b : TGAGTGACATCGTCTTTAAACCCTGCGTGGCAATCCCTGACGCACCGCCGTGATGCCCAG
20110601C-001038 : GGAAGACAGGGCGACCTGGAAGTCCAACTACTTCCTTAAGATAATCCAACTTCTGGATGA
---------+---------+---------+---------+---------+---------+ 359
OVRM1_0214_B10.b : GGAAGACAGGGCGACCTGGAAGTCCAACTACTTCCTTAAGATAATCCAACTTCTGGATGA
LNG01_0009_F03.b : GGAAGACAGGGCGACCTGGAAGTCCAACTACTTCCTTAAGATAATCCAACTTCTGGATGA
OVR01_0005_E03.b : GGAAGACAGGGCGACCTGGAAGTCCAACTACTTCCTTAAGATAATCCAACTTCTGGATGA
LVR01_0030_A02.b : GGAAGACAGGGCGACCTGGAAGTCCAACTACTTCCTTAAGATAATCCAACTTCTGGATGA
THY01_0202_D09.b : GGAAGACAGGGCGACCTGGAAGTCCAACTACTTCCTTAAGATAATCCAACTTCTGGATGA
UTR01_0069_A08.b : GGAAGACAGGGCGACCTGGAAGTCCAACTACTTCCTTAAGATAATCCAACTTCTGGATGA
20110601C-001038 : TTATCCGAAATGCTTCATTGTGGGAGCAGACAATGTGGGCTCCAAGCAGATGCAGCAGAT
---------+---------+---------+---------+---------+---------+ 419
OVRM1_0214_B10.b : TTATCCGAAATGCTTCATTGTGGGAGCAGACAATGTGGGCTCCAAGCAGATGCAGCAGAT
LNG01_0009_F03.b : TTATCCGAAATGCTTCATTGTGGGAGCAGACAATGTGGGCTCCAAGCAGATGCAGCAGAT
OVR01_0005_E03.b : TTATCCGAAATGCTTCATTGTGGGAGCAGACAATGTGGGCTCCAAGCAGATGCAGCAGAT
LVR01_0030_A02.b : TTATCCGAAATGCTTCATTGTGGGAGCAGACAATGTGGGCTCCAAGCAGATGCAGCAGAT
THY01_0202_D09.b : TTATCCGAAATGCTTTATTGTGGGAGCAGACAATGTGGGCTCCAAGCAGATGCAGCAGAT
UTR01_0069_A08.b : TTATCCGAAATGCTTCATTGTGGGAGCAGACAATGTGGGCTCCAAGCAGATGCAGCAGAT
20110601C-001038 : CCGCATGTCTCTCCGCGGGAAAGCCGTGGTGCTGATGGGCAAGAACACCATGATGCGCAA
---------+---------+---------+---------+---------+---------+ 479
OVRM1_0214_B10.b : CCGCATGTCTCTCCGCGGGAAAGCCGTGGTGCTGATGGGCAAGAACACCATGATGCGCAA
LNG01_0009_F03.b : CCGCATGTCTCTCCGCGGGAAAGCCGTGGTGCTGATGGGCAAGAACACCATGATGCGCAA
OVR01_0005_E03.b : CCGCATGTCTCTCCGCGGGAAAGCCGTGGTGCTGATGGGCAAGAACACCATGATGCGCAA
LVR01_0030_A02.b : CCGCATGTCTCTCCGCGGGAAAGCCGTGGTGCTGATGGGCAAGAACACCATGATGCGCAA
THY01_0202_D09.b : CCGCATGTCTCTCCGCGGGAAAGCCGTGGTGCTGATGGGCAAGAACACCATGATGCGCAA
UTR01_0069_A08.b : CCGCATGTCTCTCCGCGGGAAAGCCGTGGTGCTGATGGGCAAGAACACCATGATGCGCAA
20110601C-001038 : GGCCATCCGAGGGCACCTGGAAAACAACCCAGCCCTGGAGAAACTGTTGCCTCACATCCG
---------+---------+---------+---------+---------+---------+ 539
OVRM1_0214_B10.b : GGCCATCCGAGGGCACCTGGAAAACAACCCAGCCCTGGAGAAACTGTTGCCTCACATCCG
LNG01_0009_F03.b : GGCCATCCGAGGGCACCTGGAAAACAACCCAGCCCTGGAGAAACTGTCGCCTCACATCCG
OVR01_0005_E03.b : GGCCATCCGAGGGCACCTGGAAAACAACCCAGCCCTGGAGAAACTGTTGCCTCACATCCG
LVR01_0030_A02.b : GGCCATCCGAGGGCACCTGGAAAACAACCCAGCCCTGGAGAAACTGTTGCCTCACATCCG
THY01_0202_D09.b : GGCCATCCGAGGGCACCTGGAAAACAACCCAGCCCTGGAGAAACTGTTGCCTCACATCCG
UTR01_0069_A08.b : GGCCATCCGAGGGCACCTGGAAAACAACCCAGCCCTGGAGAAACTGTTGCCTCACATCCG
20110601C-001038 : GGGGAACGTGGGCTTTGTGTTCACCAAGGAGGACCTCACTGAGATCAGGGACATGCTGCT
---------+---------+---------+---------+---------+---------+ 599
OVRM1_0214_B10.b : GGGGAACGTGGGCTTTGTGTTCACCAAGGAGGACCTCACTGAGATCAGGGACATGCTGCT
LNG01_0009_F03.b : GGGGAACGTGGGCTTTGTGTTCACCAAGGAGGACCTCACTGAGATCAGGGACATGCTGCT
OVR01_0005_E03.b : GGGGAACGTGGGCTTTGTGTTCACCAAGGAGGACCTCACTGAGATCAGGGACATGCTGCT
LVR01_0030_A02.b : GGGGAACGTGGGCTTTGTGTTCA*CAAGGAGGACCTCACTGAGATCAGGGACATGCTGCT
THY01_0202_D09.b : GGGGAACATGGGCTTTGTGTTCACCAAGGAGGACCTCACTGAGATCAGGGACATGCTGCT
UTR01_0069_A08.b : GGGGAACGTGGGCTTTGTGTTCACCAAGGAGGACCTCACTGAGATCAGGGACATGCTGCT
20110601C-001038 : GGCCAATAAGGTGCCAGCTGCCGCCCGTGCTGGTGCCATAGCCCCATGCGAAGTCACTGT
---------+---------+---------+---------+---------+---------+ 659
OVRM1_0214_B10.b : GGCCAGTAAGGTGCCAGCTGCCGCCCGTGCTGGTGCCATAGCCCCtagcgaattcctgtt
LNG01_0009_F03.b : GGCCAATAAGGTGCCAGCTGCCGCCCGTGCTGGTGCCATAGCCCCATGCGAAGTCACTGT
OVR01_0005_E03.b : GGCCAATAAGGTGCCAGCTGCCGCCCGTGCTGGTGCCATAGCCCCATGCGAAGTCACTGT
LVR01_0030_A02.b : GGCCAATAAGGTGCCAGCTGCCGCCCGTGCTGGTGCCATAGCCCCATGCGAAGTCACTGT
THY01_0202_D09.b : GGCCAATAAGGTGCCAGCTGCCGCCCGTGCTGGTGCCATAGCCCCATGCGAAGTCACTGT
UTR01_0069_A08.b : GGCCAATAAGGTGCCAGCTGCCGCCCGTGCTGGTGCCATAGCCCCATGCGAAGTCACTGT
20110601C-001038 : ACCTGCCCAGAACACTGGTCTGGGGCCTGAGAAGACCTCCTTCTTCCAGGCTTTAGGCAT
---------+---------+---------+---------+---------+---------+ 719
OVRM1_0214_B10.b : acctgccattaccctggtctggggcctgagaaaaccccctcttcctggttttaggcctca
LNG01_0009_F03.b : ACCTGCCCAGAACACTGGTCTGGGGCCTGAGAAGACCTCCTTCTTCCAGGCTTTAGGCAT
OVR01_0005_E03.b : CCCTGCCCAGAACACTGGTCTGGGGCCTGAGAAGACCTCCTTCTTCCAGGCTTTAGGCAT
LVR01_0030_A02.b : ACCTGCCCAGAACACTGGTCTGGGGCCTGAGAAGACCTCCTTCTTCCAGGCTTTAGGCAT
THY01_0202_D09.b : ACCTGCCCAGAACACTGGTCTGGGGCCTGAGAAGACCTCCTTCTTCCAGGCTTTAGGCAT
UTR01_0069_A08.b : CCCTGCCCAGAACACTGGTCTGGGGCCTGAGAAGACCTCCTTCTTCCAGGCTTTAGGCAT
20110601C-001038 : CACCACTAAAATCTCCAGGGGCACCATTGAAATCCTGAGTGATGTGCAGCTGATTAAGAC
---------+---------+---------+---------+---------+---------+ 779
OVRM1_0214_B10.b : ccccaaatcccgggggtaccatccaatcctgaggaagtgcaccccat
LNG01_0009_F03.b : CACCACTAAAATCTCCAGGGGCACCATTGAAATCCTGAGTGATGTGCAGCTGATTAAGAC
OVR01_0005_E03.b : CACCACTAAAATCTCCAGGGGCACCATTGAAATCCTGAGTGATGTGCAGCTGATTAAGAC
LVR01_0030_A02.b : CACCACTAAAATCTCCAGGGGCACCATTGAAATCCTGAGTGATGTGCAGCTGATTAAGAC
THY01_0202_D09.b : CACCACTAAAATCTCCAGGGGCACCATTGAAATCCTGAGTGATGTGCAGCTGATTAAGAC
UTR01_0069_A08.b : CACCACTAAAATCTCCAGGGGCACCATTGAAATCCTGAGTGATGTGCAGCTGATTAAGAC
20110601C-001038 : TGGAGACAAAGTGGGAGCCAGTGAAGCCACGTTGCTGAACATGTTGAACATCTCCCCCTT
---------+---------+---------+---------+---------+---------+ 839
OVRM1_0214_B10.b :
LNG01_0009_F03.b : TGGAGACAAAGTGGGAGCCAGTGAAGCCACGTTGCTGAACATGTTGAACATCTCCCCCTT
OVR01_0005_E03.b : TGGAGACAAAGTGGGAGCCAGTGAAGCCACGTTGCTGAACATGTTGAACATCTCCCCCTT
LVR01_0030_A02.b : TGGAGACAAAGTGGGAGCCAGTGAAGCCACGTTGCTGAACATGTTGAACATCTCCCCCTT
THY01_0202_D09.b : TGGAGACAAAGTGGGAGCCAGTGAAGCCACGTTGCTGAACATGTTGAACATCTCCCCCTT
UTR01_0069_A08.b : TGGAGACAAAGTGGGAGCCAGTGAAGCCACGTTGCTGAACATGTTGAACATCTCCCCCTT
20110601C-001038 : CTCCTTTGGGCTGATCATCCAGCAGGTGTTTGACAATGGCAGCATCTACAACCCTGAAGT
---------+---------+---------+---------+---------+---------+ 899
OVRM1_0214_B10.b :
LNG01_0009_F03.b : CTCCTTTGGGCTGATCATCCAGCAGGTGTTTGACAATGGCAGCATCTACAACCCTGAAGT
OVR01_0005_E03.b : CTCCTTTGGGCTGATCATCCAGCAGGTGTTTGACAATGGCAGCATCTACCACCCTGAAGT
LVR01_0030_A02.b : CTCCTTTGGGCTGATCATCCAGCAGGTGTTTGACAATGGCAGCATCTACAACCCTGAAGT
THY01_0202_D09.b : CTCCTTTGGGCTGATCATCCAGCAGGTGTTTGACAATGGCAGCATCTACAACCCTGAAGT
UTR01_0069_A08.b : CTCCTTTGGGCTGATCATCCAGCAGGTGTTTGACAATGGCAGCATCTACAACCCTGAAGT
20110601C-001038 : GCTTGACATCACCGAGGAAACTCTGCATTCTCGCTTCCTGGAGGGTGTCCGCAATGTTGC
---------+---------+---------+---------+---------+---------+ 959
OVRM1_0214_B10.b :
LNG01_0009_F03.b : GCTTGACATCACCGAGGAAACTCTGCATTCTCGCTTCCTGGAGGGTGTCCGCAATGTTGC
OVR01_0005_E03.b : GCTTGACATCACCGAGGAAACTCTGCATTCTCGCTTCCTGGAGGGTGTCCGCAATGTTGC
LVR01_0030_A02.b : GCTTGACATCACCGAGGAAACTCTGCATTCTCGCTTCCTGGAGGGTGTCCGCAATGTTGC
THY01_0202_D09.b : GCTTGACATCACCGAGGAAACTCTGCATTCTCGCTTCCTGGAGGGTGTCCGCAATGTTGC
UTR01_0069_A08.b : GCTTGACATCACCGAGGAAACTCTGCATTCTCGCTTCCTGGAGGGTGTCCGCAATGTTGC
20110601C-001038 : CAGCGTATGTCTGCAGATTGGTTACCCAACTGTTGCATCTGTACCCCATTCTATCATCAA
---------+---------+---------+---------+---------+---------+ 1019
OVRM1_0214_B10.b :
LNG01_0009_F03.b : CAGCGTATGTCTGCAGATTGGTTACCCAACTGTTGCATCTGTACCCCATTCTATCATCAA
OVR01_0005_E03.b : CAGCGTATGTCTGCAGATTGGTTACCCCACTGTTGCATCTGTACCTCATTCTATCATCAA
LVR01_0030_A02.b : CAGCGTATGTCTGCAGATTGGTTACCCAACTGTTGCATCTGTACCCCATTCTATCATCAA
THY01_0202_D09.b : CAGCGTATGTCTGCAGATTGGTTACCCAACTGTTGCATCTGTACCCCATTCTATCATCAA
UTR01_0069_A08.b : CAGCGTATGTCTGCAGATTGGTTACCCAACTGTTGCATCTGTACCCCATTCTATCATCAA
20110601C-001038 : TGGGTACAAGCGGGTCCTGGCTTTGTCTGTGGAAACTGATTACACCTTCCC*ACTTGCTG
---------+---------+---------+---------+---------+---------+ 1078
OVRM1_0214_B10.b :
LNG01_0009_F03.b : TGGGTACAAGCGGGTCCTGGCTTTGTCTGTGGAAACTGATTACACCTTCCC*ACTTGCTG
OVR01_0005_E03.b : TGGGTACAAGCGGGTCCTGGCTTTGTCTGTGGAAACTGATTACACCTTCCCCACTTGCTG
LVR01_0030_A02.b : TGGGTACAAGCGGGTCCTGGCTTTGTCTGTGGAAACTGATTACACCTTCCC*ACTTGCTG
THY01_0202_D09.b : TGGGTACAAGCGGGTCCTGGCTTTGTCTGTGGAAACTGATTACACCTTCCC*ACTTGCTG
UTR01_0069_A08.b : TGGGTACAAGCGGGTCCTGGCTTTGTCTGTGGAAACTGATTACACCTTCCC*ACTTGCTG
20110601C-001038 : AAAAGGTCAAGGC*CTTCTTGGCTGATCCATCTGCCTTTTGTGGCTGCTGCCCCTGT*GG
---------+---------+---------+---------+---------+---------+ 1136
OVRM1_0214_B10.b :
LNG01_0009_F03.b : AAAAGGTCAAGGC*CTTCTTGGCTGATCCATCTGCCCTTTGTGGCTGCTGCCCCTGT*GG
OVR01_0005_E03.b : AAAAGGTCCAGGCCCTCCTTGGCTGATCCCTCTGCCTTTGTGGNCTGCTGCCCCTGNGGG
LVR01_0030_A02.b : AAAAGGTCAAGGCCTTTCTTGGCTGATCCATCTGCCTTTTGTGGCTGCTGCCCCTGGTGG
THY01_0202_D09.b : AAAAGGTCAAGGC*CTTCTTGGCTGATCCATCTGCC*TTTGTGGCTGCTGCCCCTGT*GG
UTR01_0069_A08.b : AAAAGGTCAAGGCCTTNCTTGGCTGATCCATCTGCCTTTTGTGgctgctgccccctgtgg
20110601C-001038 : CTGCAGCCACCACTTGCTGCTCCTGCTGCTGCTGCTGCAGCCCCAGCCAAGGTTG*AAGC
---------+---------+---------+---------+---------+---------+ 1195
OVRM1_0214_B10.b :
LNG01_0009_F03.b : CTGCAGCCCACAc*tgctgctcctgctgctgctgctgccgcCCCAGCCAAGGTTG*AAGC
OVR01_0005_E03.b : CTGCAGCCACCAc*tgctgctcctgctgctgctgctgcAGCCCCCACCAAGGTTG*GAAG
LVR01_0030_A02.b : CTGCAGCCACCACctgctgctcctgctgctgctgctgcAGGCCCAGCCAAGGTTG*AAGC
THY01_0202_D09.b : GTGCAGCCCCCACTtgctgctcctgctgctgctgctgcAGCCCCAACCAAGGTTG*AAG*
UTR01_0069_A08.b : ctgcagccaccactgctggctcctgctgctgctgctgccgcCCCCGCCAAGGTTGGAAGC
20110601C-001038 : AAAAGGAGGAATCCGAAGGAATTCGGAACAAGGAAATTGGGATTTGGGTCTCTTTTGAAT
---------+---------+---------+---------+---------+---------+ 1255
OVRM1_0214_B10.b :
LNG01_0009_F03.b : AAAAGGAAGAGTCCGAAGGAGTCGGAACAAG**AAATTGGGATTTGGGTCTCCTTTGAAT
OVR01_0005_E03.b : CAAAGGAggagtccgaaggagtccgaccaagattttgggattttgtcctctttgactaaa
LVR01_0030_A02.b : CAAAGGAAGGATTCGAAAGAATCCGGAAGAGGAATATGGGAATTTTGGTCTCCTTTAACT
THY01_0202_D09.b : CAAAGGAGGAAATCGGAGGAATTCGGAACAAAGAATTTGGAATTTGGGTCTTTTTTTACA
UTR01_0069_A08.b : AAAAGAAGGAATCCGAAGGAGTTCGGAACAAGGATATGGGGATTTGGTCCTCTTTTGAAT
20110601C-001038 : *AAATTTACCCAAAAAAGCAACCCAAAGTCCACCC**GCCTTTTATTTTGGGAAAAAAAA
---------+---------+---------+---------+---------+---------+ 1312
OVRM1_0214_B10.b :
LNG01_0009_F03.b : *AAATTTACCAAAAAA**CAAACCAAAGTCAGCCC**GGCTTTTTTTTTGGTAAAAAACA
OVR01_0005_E03.b : tttcccaaaaaagcaacccagccc
LVR01_0030_A02.b : *TAAATTACCCAAAAAAGCAACCCAAAGTCCAGCCCAGCCTTTTATTTTTGTGAAAAACA
THY01_0202_D09.b : *AAATTA**CCAAAAAACCAACCCAAGTTCCCCCC***TCTTTTATTTTTTGGAAAAAAA
UTR01_0069_A08.b : TAAATTTACCAAAAAAAGCAAACAAAAGTTCACCCCCGCCTTTATTTTGGGGaaaaaaaa
20110601C-001038 : AAAAAAAAAAA***AAGGGCTTTTCCTTTCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
---------+---------+---------+---------+---------+---------+ 1369
OVRM1_0214_B10.b :
LNG01_0009_F03.b : AAAAAAAAAAA***AAGGGTTTTACCTTTCCTaaaaaaaaaaaaaaaaaaaaaaaaaaaa
OVR01_0005_E03.b :
LVR01_0030_A02.b : AAAAAAAAAAATAAAAGGGCTTTTCCTTTTTTTaaaaaaaaaaaaaaaaaaaaaaaaaaa
THY01_0202_D09.b : AAAAAAAAAA******GGGGGTTTATTTTCTaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
UTR01_0069_A08.b : aaaaaaaaaaa***aGGGGCTTTACTTTTTCTTaaaaaaaaaaaaaaaaaaaaaaaaaaa
20110601C-001038 : AAAAAAAAAAGGGGGG............................................
---------+---------+---------+---------+---------+---------+ 1385
OVRM1_0214_B10.b :
LNG01_0009_F03.b : aaaggggccca
OVR01_0005_E03.b :
LVR01_0030_A02.b : aaaggggccccccccatttggtggtcctctccccaaaaccctctgtcgcgaggggggggc
THY01_0202_D09.b : gggggcccccattggtgtccctttccacacttt
UTR01_0069_A08.b : aaaaaaaaaaGGGGGGccccccacagttggtggccccttccccgaaaacccccttggc