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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-001434

Length: 1,136

Sequence [FASTA format sequence]
GGCCTTGTCT GCCGACAAAA GAGCTAGAGT TCCGGGGATC CGAGCCCACC GCGCCGGGGA
CGGGGCGGGT CCTCCCCTCC GTGGCCTCCT AGGCTCTGCC GAGGCGGTGG GAAGCAGGGC
CGCCCGGCCC GGAGTCCCCG CGGGTGGAGA GGAGCGTGGG CGGGGCTCCC GGAGGTGGGG
TCCCCGGGGC GGGGAGCGCC GAGTCCGCCG GCCGGTGCAC AGTCTCGCTG GAGTCCGACA
GAGCCCACAC TGGTCCCGAG ATGACGGCGA GCAAGCGGGT GGCAAAGGAG CTGGAGGATC
TTCAGAAGGA GCTTCCCAGG TACCTCGGGA AGCTGTTCAG CGATGATGCC AACGTGTTGG
TGTGGCACGC GCTCCTCCTG CCTGAGAAAC CGCCCTACAA CCTCAGGGCC TTCAACCTTC
GCATCAGCTT CCCGGAGGAG TACCCATTCA AGCCCCCGAC GGTGACGTTT ACAACTAGGA
TCTACCACCC CAACGTGGAC AGCGAAGGCC AGGTGTGTCT GCCCATCATC AGCAACGAGA
ACTGGAAGCC CTGCACCAAG ACCTGCCAAG TCCTGGAGGC CCTCAACGTG CTGGTGAATA
GACCAGAGCC AGGGCAGCCC CTTCGGGTGG AGCTCGCCGA CCAGCTGACC CAGGACCCGG
AGCTGTTCAA CAGGAAGGCC GAAGAGTTCA CCCTCCAGTT CGGAGTGGAC CGGCCCTCCT
AACTCTGCCC GTGACCCGTC TCTGCACCAG ATCCTCTCTG CGTGATGGAC GGACATACCG
CACGGATGGG GAGCCAGAGC CCCTTTGTGA TCCTGCTCAC TTCTTCCAAG TTTTCCCTTG
TAGGCTGTTA GTCATTAGTG TGTGTGCGTG CGTGTGTGTC CGTGTGTGAA CGCGCAGGTG
TGTGTATGGG GGGGGGTACA GATGTTTGTG GTATGTGGAC CCAGGGCCCA CAGGTGCGCT
TGTCCCACTC CCTTTTTCTG CTCCAGAGCC AGGGACATCG AGGTTTGCAG AGTCACAGGC
CAGCTCTTCT GGACTCTGTG AGATGGGATT CCTGGTTTCG CTAGTTGGTT CATCGTAGAG
ACTCAGGCCA CCTTTCCAGC CAGCTTGTGG GCAGTGAGCC CAGCAGCTGA CCGGAA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinUBE2L6ubiquitin/ISG15-conjugating enzyme E2 L6 isoform 1 [Homo sapiens]. 2533e-67O
Contig/Assembly ProteinUBE2L3ubiquitin-conjugating enzyme E2 L3 [Homo sapiens]. 1772e-44O
Contig/Assembly ProteinUBE2L6ubiquitin/ISG15-conjugating enzyme E2 L6 isoform 2 [Homo sapiens]. 1481e-35O
Contig/Assembly ProteinUBE2D4ubiquitin-conjugating enzyme E2 D4 [Homo sapiens]. 1072e-23O
Contig/Assembly ProteinUBE2D1ubiquitin-conjugating enzyme E2 D1 isoform 1 [Homo sapiens]. 1041e-22O
Contig/Assembly ProteinUBE2D2ubiquitin-conjugating enzyme E2 D2 isoform 1 [Homo sapiens]. 1041e-22O
Contig/Assembly ProteinUBE2D3ubiquitin-conjugating enzyme E2 D3 isoform 2 [Homo sapiens]. 1033e-22O
Contig/Assembly ProteinUBE2D3ubiquitin-conjugating enzyme E2 D3 isoform 1 [Homo sapiens]. 1027e-22O
Contig/Assembly ProteinUBE2D3ubiquitin-conjugating enzyme E2 D3 isoform 1 [Homo sapiens]. 1027e-22O
Contig/Assembly ProteinUBE2D3ubiquitin-conjugating enzyme E2 D3 isoform 1 [Homo sapiens]. 1027e-22O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinUbe2l6ubiquitin/ISG15-conjugating enzyme E2 L6 [Mus musculus]. 2316e-61O
Contig/Assembly ProteinUbe2l3ubiquitin-conjugating enzyme E2 L3 [Mus musculus]. 1772e-44O
Contig/Assembly ProteinGm10705PREDICTED: ubiquitin-conjugating enzyme E2 L3-like [Mus musculus]. 1772e-44O
Contig/Assembly ProteinGm10145PREDICTED: ubiquitin-conjugating enzyme E2 L3-like [Mus musculus]. 1749e-44O
Contig/Assembly ProteinGm10145PREDICTED: ubiquitin-conjugating enzyme E2 L3-like [Mus musculus]. 1749e-44O
Contig/Assembly ProteinGm10705PREDICTED: ubiquitin-conjugating enzyme E2 L3-like isoform 2 [Mus musculus]. 1741e-43O
Contig/Assembly ProteinLOC100045901PREDICTED: ubiquitin-conjugating enzyme E2 L3-like [Mus musculus]. 1741e-43O
Contig/Assembly ProteinGm5858PREDICTED: ubiquitin-conjugating enzyme E2 L3-like isoform 3 [Mus musculus]. 1693e-42O
Contig/Assembly ProteinGm5858PREDICTED: ubiquitin-conjugating enzyme E2 L3-like isoform 1 [Mus musculus]. 1693e-42O
Contig/Assembly ProteinLOC100502680PREDICTED: ubiquitin-conjugating enzyme E2 L3-like [Mus musculus]. 1671e-41O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC475967PREDICTED: similar to ubiquitin-conjugating enzyme E2L 6 isoform 1 [Canis familiaris]. 2633e-70O
Contig/Assembly ProteinLOC475967PREDICTED: similar to ubiquitin-conjugating enzyme E2L 6 isoform 1 isoform 3 [Canis familiaris]. 1802e-45O
Contig/Assembly ProteinLOC477572PREDICTED: similar to Ubiquitin-conjugating enzyme E2 L3 (Ubiquitin-protein ligase L3) (Ubiquitin carrier protein L3) (UbcM4) isoform 1 [Canis familiaris]. 1772e-44O
Contig/Assembly ProteinLOC477572PREDICTED: similar to Ubiquitin-conjugating enzyme E2 L3 (Ubiquitin-protein ligase L3) (Ubiquitin carrier protein L3) (UbcM4) isoform 2 [Canis familiaris]. 1472e-35O
Contig/Assembly ProteinLOC607753PREDICTED: similar to Ubiquitin-conjugating enzyme E2 L3 (Ubiquitin-protein ligase L3) (Ubiquitin carrier protein L3) (UbcM4) [Canis familiaris]. 1394e-33O
Contig/Assembly ProteinLOC612742PREDICTED: similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2) isoform 1 [Canis familiaris]. 1041e-22O
Contig/Assembly ProteinLOC608578PREDICTED: similar to ubiquitin-conjugating enzyme E2D 1, UBC4/5 homolog [Canis familiaris]. 1041e-22O
Contig/Assembly ProteinLOC612742PREDICTED: similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2) isoform 5 [Canis familiaris]. 1041e-22O
Contig/Assembly ProteinLOC612742PREDICTED: similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2) isoform 4 [Canis familiaris]. 1041e-22O
Contig/Assembly ProteinLOC612742PREDICTED: similar to Ubiquitin-conjugating enzyme E2 D2 (Ubiquitin-protein ligase D2) (Ubiquitin carrier protein D2) (Ubiquitin-conjugating enzyme E2-17 kDa 2) (E2(17)KB 2) isoform 3 [Canis familiaris]. 1041e-22O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinUBE2L6ubiquitin/ISG15-conjugating enzyme E2 L6 [Bos taurus]. 2592e-69O
Contig/Assembly ProteinUBE2L3ubiquitin-conjugating enzyme E2 L3 [Bos taurus]. 1772e-44O
Contig/Assembly ProteinUBE2D1ubiquitin-conjugating enzyme E2 D1 [Bos taurus]. 1041e-22O
Contig/Assembly ProteinUBE2D2ubiquitin-conjugating enzyme E2 D2 [Bos taurus]. 1041e-22O
Contig/Assembly ProteinUBE2D3ubiquitin-conjugating enzyme E2 D3 [Bos taurus]. 99.84e-21O
Contig/Assembly ProteinLOC100298832PREDICTED: ubiquitin-conjugating enzyme E2D 3-like [Bos taurus]. 98.21e-20O
Contig/Assembly ProteinUBE2D4ubiquitin-conjugating enzyme E2D 4 [Bos taurus]. 97.42e-20O
Contig/Assembly ProteinLOC100337248PREDICTED: ubiquitin-conjugating enzyme E2D 3-like [Bos taurus]. 97.42e-20O
Contig/Assembly ProteinLOC100337232PREDICTED: ubiquitin-conjugating enzyme E2D 3-like [Bos taurus]. 97.42e-20O
Contig/Assembly ProteinLOC100336370PREDICTED: ubiquitin-conjugating enzyme E2D 3-like [Bos taurus]. 97.13e-20O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinUBE2L6PREDICTED: ubiquitin/ISG15-conjugating enzyme E2 L6 isoform 2 [Sus scrofa]. 3185e-87O
Contig/Assembly ProteinUBE2L6PREDICTED: ubiquitin/ISG15-conjugating enzyme E2 L6 isoform 1 [Sus scrofa]. 3185e-87O
Contig/Assembly ProteinUBE2L3ubiquitin-conjugating enzyme E2 L3 [Sus scrofa]. 1771e-44O
Contig/Assembly ProteinLOC100524597PREDICTED: ubiquitin-conjugating enzyme E2 D4-like [Sus scrofa]. 1079e-24O
Contig/Assembly ProteinLOC780419UB2D1 [Sus scrofa]. 1048e-23O
Contig/Assembly ProteinLOC100523265PREDICTED: ubiquitin-conjugating enzyme E2 D3-like isoform 2 [Sus scrofa]. 1024e-22O
Contig/Assembly ProteinLOC100523265PREDICTED: ubiquitin-conjugating enzyme E2 D3-like isoform 1 [Sus scrofa]. 1024e-22O
Contig/Assembly ProteinUBE2D2ubiquitin-conjugating enzyme E2 D2 [Sus scrofa]. 1024e-22O
Contig/Assembly ProteinLOC100525551PREDICTED: ubiquitin-conjugating enzyme E2 D2-like [Sus scrofa]. 99.83e-21O
Contig/Assembly ProteinUBCH5BPREDICTED: ubiquitin-conjugating enzyme E2 D2 [Sus scrofa]. 96.72e-20O


Assembly Members: 6      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
ITT010067G04ITT01_0067_G04.bBW981994 
SPLT10030E12SPLT1_0030_E12.bHX241525 
SPLT10038A03SPLT1_0038_A03.bHX242114 
SPLT10042C07SPLT1_0042_C07.bHX242455 
SPLT10065B09SPLT1_0065_B09.bHX244224 
UTR010026A05UTR01_0026_A05.bBP169553 AK240057

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
611A300.600WSCCA/P
G200.400CCG/P


Alignment:      TOP

20110601C-001434 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
SPLT1_0030_E12.b : nnntgagcgatacgacgccgtxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0038_A03.b : nnccgcttggnnnnnatctagtagacgcagtxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
UTR01_0026_A05.b : tttggggtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPLT1_0042_C07.b : nnnnggcgagtagxxxxxxxxxxxxxxxx
SPLT1_0065_B09.b :
ITT01_0067_G04.b :
20110601C-001434 : ........GGCCTTGTCTGCCGACAAAAGAGCTAGAGTTCCGGGGATCCGAGCCCACCGC
---------+---------+---------+---------+---------+---------+ 52
SPLT1_0030_E12.b : xxxxxxxxGGCCTTGTCTGCCGACAAAAGAGCTAGAGTTCCGGGGATCCGAGCCCACCGC
SPLT1_0038_A03.b : xxxxxxxxGGCCTTGTCTGCCGACAAAAGAGCTAGAGTTCCGGGGATCCGAGCCCACCGC
UTR01_0026_A05.b : xxxxxxxxxxxxxxxxxxxxxxggAAAAGAGCTAGAGTTCCGGGGATCCGAGCCCACCGC
SPLT1_0042_C07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgAGAGTTCCGGGGATCCGAGCCCACCGC
SPLT1_0065_B09.b :
ITT01_0067_G04.b :
20110601C-001434 : GCCGGGGACGGGGCGGGTCCTCCCCTCCGTGGCCTCCTAGGCTCTGCCGAGGCGGTGGGA
---------+---------+---------+---------+---------+---------+ 112
SPLT1_0030_E12.b : GCCGGGGACGGGGCGGGTCCTCCCCTCCGTGGCCTCCTAGGCTCTGCCGAGGCGGTGGGA
SPLT1_0038_A03.b : GCCGGGGACGGGGCGGGTCCTCCCCTCCGTGGCCTCCTAGGCTCTGCCGAGGCGGTGGGA
UTR01_0026_A05.b : GCCGGGGACGGGGCGGGTCCTCCCCTCCGTGGCCTTCTAGGCTCTGCCGAGGCGGTGGGA
SPLT1_0042_C07.b : GCCGGGGACGGGGCGGGTCCTCCCCTCCGTGGCCTCCTAGGCTCTGCCGAGGCGGTGGGA
SPLT1_0065_B09.b :
ITT01_0067_G04.b :
20110601C-001434 : AGCAGGGCCGCCCGGCCCGGAGTCCCCGCGGGTGGAGAGGAGCGTGGGCGGGGCTCCCGG
---------+---------+---------+---------+---------+---------+ 172
SPLT1_0030_E12.b : AGCAGGGCCGCCCGGCCCGGAGTCCCCGCGGGTGGAGAGGAGCGTGGGCGGGGCTCCCGG
SPLT1_0038_A03.b : AGCAGGGCCGCCCGGCCCGGAGTCCCCGCGGGTGGAGAGGAGCGTGGGCGGGGCTCCCGG
UTR01_0026_A05.b : AGCAGGGCCGCCCAGCCCGGAGTCCCCGCGGGTGGAGAGGAGCGTGGGCGGGGCTCCCGG
SPLT1_0042_C07.b : AGCAGGGCCGCCCGGCCCGGAGTCCCCGCGGGTGGAGAGGAGCGTGGGCGGGGCTCCCGG
SPLT1_0065_B09.b : nnnnnggacggtxxxxx
ITT01_0067_G04.b : nnggtga
20110601C-001434 : AGGTGGGGTCCCCGGGGCGGGGAGCGCCGAGTCCGCCGGCCGGTGCACAGTCTCGCTGGA
---------+---------+---------+---------+---------+---------+ 232
SPLT1_0030_E12.b : AGGTGGGGTCCCCGGGGCGGGGAGCGCCGAGTCCGCCGGCCGGTGCACAGTCTCGCTGGA
SPLT1_0038_A03.b : AGGTGGGGTCCCCGGGGCGGGGAGCGCCGAGTCCGCCGGCCGGTGCACAGTCTCGCTGGA
UTR01_0026_A05.b : AGGTGGGGTCCCCGGGGCGGGGAGCGCCGAGTCCGCCGGCCGGTGCACAGTCTCGCTGGA
SPLT1_0042_C07.b : AGGTGGGGTCCCCGGGGCGGGGAGCGCCGAGTCCGCCGGCCGGTGCACAGTCTCGCTGGA
SPLT1_0065_B09.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgAGTCTCGCTGGA
ITT01_0067_G04.b : tacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGTCTCGCTGGA
20110601C-001434 : GTCCGACAGAGCCCACACTGGTCCCGAGATGACGGCGAGCAAGCGGGTGGCAAAGGAGCT
---------+---------+---------+---------+---------+---------+ 292
SPLT1_0030_E12.b : GTCCGACAGAGCCCACACTGGTCCCGAGATGACGGCGAGCAAGCGGGTGGCAAAGGAGCT
SPLT1_0038_A03.b : GTCCGACAGAGCCCACACTGGTCCCGAGATGACGGCGAGCAAGCGGGTGGCAAAGGAGCT
UTR01_0026_A05.b : GTCCGACAGAGCCCACACTGGTCCCGAGATGACGGCGAGCAAGCGGGTGGCAAAGGAGCT
SPLT1_0042_C07.b : GTCCGACAGAGCCCACACTGGTCCCGAGATGACGGCGAGCAAGCGGGTGGCAAAGGAGCT
SPLT1_0065_B09.b : GTCCGACAGAGCCCACACTGGTCCCGAGATGACGGCGAGCAAGCGGGTGGCAAAGGAGCT
ITT01_0067_G04.b : GTCCGACAGAGCCCACACTGGTCCCGAGATGACGGCGAGCAAGCGGGTGGCAAAGGAGCT
20110601C-001434 : GGAGGATCTTCAGAAGGAGCTTCCCAGGTACCTCGGGAAGCTGTTCAGCGATGATGCCAA
---------+---------+---------+---------+---------+---------+ 352
SPLT1_0030_E12.b : GGAGGATCTTCAGAAGGAGCTTCCCAGGTACCTCGGGAAGCTGTTCAGCGATGATGCCAA
SPLT1_0038_A03.b : GGAGGATCTTCAGAAGGAGCTTCCCAGGTACCTCGGGAAGCTGTTCAGCGATGATGCCAA
UTR01_0026_A05.b : GGAGGATCTTCAGAAGGAGCTTCCCAGGTACCTCGGGAAGCTGTTCAGCGATGATGCCAA
SPLT1_0042_C07.b : GGAGGATCTTCAGAAGGAGCTTCCCAGGTACCTCGGGAAGCTGTTCAGCGATGATGCCAA
SPLT1_0065_B09.b : GGAGGATCTTCAGAAGGAGCTTCCCAGGTACCTCGGGAAGCTGTTCAGCGATGATGCCAA
ITT01_0067_G04.b : GGAGGATCTTCAGAAGGAGCTTCCCAGGTACCTCGGGAAGCTGTTCAGCGATGATGCCAA
20110601C-001434 : CGTGTTGGTGTGGCACGCGCTCCTCCTGCCTGAGAAACCGCCCTACAACCTCAGGGCCTT
---------+---------+---------+---------+---------+---------+ 412
SPLT1_0030_E12.b : CGTGTTGGTGTGGCACGCGCTCCTCCTGCCTGAGAAACCGCCCTACAACCTCAGGGCCTT
SPLT1_0038_A03.b : CGTGTTGGTGTGGCACGCGCTCCTCCTGCCTGAGAAACCGCCCTACAACCTCAGGGCCTT
UTR01_0026_A05.b : CGTGTTGGTGTGGCACGCGCTCCTCCTGCCTGAAAAACCGCCCTACAACCTCAGGGCCTT
SPLT1_0042_C07.b : CGTGTTGGTGTGGCACGCGCTCCTCCTGCCTGAGAAACCGCCCTACAACCTCAGGGCCTT
SPLT1_0065_B09.b : CGTGTTGGTGTGGCACGCGCTCCTCCTGCCTGAGAAACCGCCCTACAACCTCAGGGCCTT
ITT01_0067_G04.b : CGTGTTGGTGTGGCACGCGCTCCTCCTGCCTGAGAAACCGCCCTACAACCTCAGGGCCTT
20110601C-001434 : CAACCTTCGCATCAGCTTCCCGGAGGAGTACCCATTCAAGCCCCCGACGGTGACGTTTAC
---------+---------+---------+---------+---------+---------+ 472
SPLT1_0030_E12.b : CAACCTTCGCATCAGCTTCCCGGAGGAGTACCCATTCAAGCCCCCGACGGTGACGTTTAC
SPLT1_0038_A03.b : CAACCTTCGCATCAGCTTCCCGGAGGAGTACCCATTCAAGCCCCCGACGGTGACGTTTAC
UTR01_0026_A05.b : CAACCTTCGCATCAGCTTCCCGGAGGAGTACCCATTCAAGCCCCCGACGGTGACGTTTAC
SPLT1_0042_C07.b : CAACCTTCGCATCAGCTTCCCGGAGGAGTACCCATTCAAGCCCCCGACGGTGACGTTTAC
SPLT1_0065_B09.b : CAACCTTCGCATCAGCTTCCCGGAGGAGTACCCATTCAAGCCCCCGACGGTGACGTTTAC
ITT01_0067_G04.b : CAACCTTCGCATCAGCTTCCCAGAGGAGTACCCATTCAAGCCCCCGACGGTGACGTTTAC
20110601C-001434 : AACTAGGATCTACCACCCCAACGTGGACAGCGAAGGCCAGGTGTGTCTGCCCATCATCAG
---------+---------+---------+---------+---------+---------+ 532
SPLT1_0030_E12.b : AACTAGGATCTACCACCCCAACGTGGACAGCGAAGGCCAGGTGTGTCTGCCCATCATCAG
SPLT1_0038_A03.b : AACTAGGATCTACCACCCCAACGTGGACAGCGAAGGCCAGGTGTGTCTGCCCATCATCAG
UTR01_0026_A05.b : AACCAGGATCTACCACCCCAACGTGGACAGCGAAGGCCAGGTGTGTCTGCCCATCATCAG
SPLT1_0042_C07.b : AACTAGGATCTACCACCCCAACGTGGACAGCGAAGGCCAGGTGTGTCTGCCCATCATCAG
SPLT1_0065_B09.b : AACTAGGATCTACCACCCCAACGTGGACAGCGAAGGCCAGGTGTGTCTGCCCATCATCAG
ITT01_0067_G04.b : AACTAGGATCTACCACCCCAACGTGGACAGCGAAGGCCAGGTGTGTCTGCCCATCATCAG
20110601C-001434 : CAACGAGAACTGGAAGCCCTGCACCAAGACCTGCCAAGTCCTGGAGGCCCTCAACGTGCT
---------+---------+---------+---------+---------+---------+ 592
SPLT1_0030_E12.b : CAACGAGAACTGGAAGCCCTGCACCAAGACCTGCCAAGTCCTGGAGGCCCTCAACGTGCT
SPLT1_0038_A03.b : CAACGAGAACTGGAAGCCCTGCACCAAGACCTGCCAAGTCCTGGAGGCCCTCAACGTGCT
UTR01_0026_A05.b : CAACGAGAACTGGAAGCCCTGCACCAAGACCTGCCAAGTCCTGGAGGCCCTCAACGTGCT
SPLT1_0042_C07.b : CAACGAGAACTGGAAGCCCTGCACCAAGACCTGCCAAGTCCTGGAGGCCCTCAACGTGCT
SPLT1_0065_B09.b : CAACGAGAACTGGAAGCCCTGCACCAAGACCTGCCAAGTCCTGGAGGCCCTCAACGTGCT
ITT01_0067_G04.b : CAACGAGAACTGGAAGCCCTGCACCAAGACCTGCCAAGTCCTGGAGGCCCTCAACGTGCT
20110601C-001434 : GGTGAATAGACCAGAGCCAGGGCAGCCCCTTCGGGTGGAGCTCGCCGACCAGCTGACCCA
---------+---------+---------+---------+---------+---------+ 652
SPLT1_0030_E12.b : GGTGAATAGACCAGAGCCAGGGCAGCCCCTTCGGGTGGAGCTCGCCGACCAGCTGACCCA
SPLT1_0038_A03.b : GGTGAATAGACCAGAGCCAGGGCAGCCCCTTCGGGTGGAGCTCGCCGACCAGCTGACCCA
UTR01_0026_A05.b : GGTGAATAGACCAGAGCCGGGGCAGCCCCTTCGGGTGGAGCTCGCCGACCAGCTGACCCA
SPLT1_0042_C07.b : GGTGAATAGACCAGAGCCAGGGCAGCCCCTTCGGGTGGAGCTCGCCGACCAGCTGACCCA
SPLT1_0065_B09.b : GGTGAATAGACCAGAGCCAGGGCAGCCCCTTCGGGTGGAGCTCGCCGACCAGCTGACCCA
ITT01_0067_G04.b : GGTGAATAGACCAGAGCCGGGGCAGCCCCTTCGGGTGGAGCTCGCCGACCAGCTGACCCA
20110601C-001434 : GGACCCGGAGCTGTTCAACAGGAAGGCCGAAGAGTTCACCCTCCAGTTCGGAGTGGACCG
---------+---------+---------+---------+---------+---------+ 712
SPLT1_0030_E12.b : GGACCCGGAGCTGTTTCACAGGAAGGCCGAAGAGTTCA*CCTCCAGTTCGGAGTGGACCG
SPLT1_0038_A03.b : GGACCCGGAGCTGTTCAACAGGAAGGCCGAAGAGTTCACCCTCCAGTTCGGAGTGGACCG
UTR01_0026_A05.b : GGACCCGGAGCTGTTCAACAGGAAGGCCGAAGAGTTCACCCTCCAGTTCGGAGTGGACCG
SPLT1_0042_C07.b : GGACCCGGAGCTGTTCAACANGAAGGCCGAAGAGTTCACCCTCCAGTTCGGAGTGGACCG
SPLT1_0065_B09.b : GGACCCGGAGCTGTTCAACAGGAAGGCCGAAGAGTTCACCCTCCAGTTCGGAGTGGACCG
ITT01_0067_G04.b : GGACCCGGAGCTGTTCAACAGGAAGGCCGAAGAGTTCACCCTCCAGTTCGGAGTGGACCG
20110601C-001434 : GCCCTCCTAACTCTGCCCGTGACCCGTCTCTGCACCAGATCCTCTCTGCGTGATGGACGG
---------+---------+---------+---------+---------+---------+ 772
SPLT1_0030_E12.b : GCCCTCGTA*CTCTGCCCGTGACCCGTCTCTGCACCAGATCCTCTCTGCNTGATGGACGG
SPLT1_0038_A03.b : GCCCTCGTAACTCTGCCCGTGACCCGTCTCTGCACCAGATCCTCTCTGCGTGATGGACGG
UTR01_0026_A05.b : GCCCTCCTAACTCTGCCCGTGACCCGTCTCTGCACCAGATCCTCTCTGCGTGATGGACGG
SPLT1_0042_C07.b : GCCCTCGTAACTCTGCCCGTGACCCGTCTCTGCACCAGATCCTCTCTGCGTGATGGACGG
SPLT1_0065_B09.b : GCCCTCGTAACTCTGCCCGTGACCCGTCTCTGCACCAGATCCTCTCTGCGTGATGGACGG
ITT01_0067_G04.b : GCCCTCCTAACTCTGCCCGTGACCCGTCTCTGCACCAGATCCTCTCTGCGTGATGGACGG
20110601C-001434 : ACATACCGCACGGATGGGGAGCCAGAGCCCCTTTGTGATCCTGCTCACTTCTTCCAAGTT
---------+---------+---------+---------+---------+---------+ 832
SPLT1_0030_E12.b : ACATACCGCACGGATGGGGAACCAGACCCCCTTTtgatcctgcccactccttccaatttt
SPLT1_0038_A03.b : ACATACCGCACGGATGGGGAACCAGACCCCCTTTGTGATCCTGCTCACTTCT*CCAAGTT
UTR01_0026_A05.b : ACATATCGCACGGATGGGGAGCCAGAGCCCCTTTGTGCTCCTGCTCATTTCTTCCAAGTT
SPLT1_0042_C07.b : ACATACCGCACGGATGGGGAGCCAGAGCCCCTTTGTGATCCTGCTCACTTCTTCCAAGT*
SPLT1_0065_B09.b : ACATACCGCACGGATGGGGAGCCAGAGCCCCTTTGTGATCCTGCTCACTTCTTCCAAGTT
ITT01_0067_G04.b : ACATACCGCACGGATGGGGAGCCAGAGCCCCTTTGTGATCCTGCTCACTTCTTCCAAGTT
20110601C-001434 : TTCCCTTGTAGGCTGTTAGTCATTAGTGTGTGTGCGTGCGTGTGTGTCCGTGTGTGAACG
---------+---------+---------+---------+---------+---------+ 892
SPLT1_0030_E12.b : ccctttgaagccggtatccattaggggggtgtgtggttggtgtcccttggttaaaccccc
SPLT1_0038_A03.b : TTCCCTTGTTAGCTGTAAGTCATTAATGTGTGTGTGTGCGTGTGTgtccctgtgtaaacc
UTR01_0026_A05.b : TTCCCTTGTAGGCTG
SPLT1_0042_C07.b : TTCCCTTGTAGGCTGTTAGTCATTAATGTGTGTGTGTGCCTGTGTTTCCGTGTGTGAACC
SPLT1_0065_B09.b : TTCCCTTGTAAGCTGTTAGTCATTANtgtgtgtgtgtgcgtgtgtgtccctgtgtgaacg
ITT01_0067_G04.b : TTCCCTTGTAGGCTGTTAGTCATTAgtgtgtgtgcgtgcgtgtgtgtccgtgtgtgaacg
20110601C-001434 : CGCAGGTGTGTGTATGGGGGGGGGTACAGATGTTTGTGGTATGTGGACCCAGGGCCCACA
---------+---------+---------+---------+---------+---------+ 952
SPLT1_0030_E12.b : ggttttgtttggggggggggtcaaattttttttgttattgaccccgggcccacaggggcc
SPLT1_0038_A03.b : cccggtttgtgtatgggggggggtaaaaattttgtggtatgtgaaccagggcccacgggg
UTR01_0026_A05.b :
SPLT1_0042_C07.b : CGCCAGTGTGTGTATTGGGGGGGGttacaaatttttttgggtaattggaacccaggcccc
SPLT1_0065_B09.b : cccaggtgtgtgtatgGGGGGGGGTAnnaaaaattgaggaaaagaagggaannnnnagag
ITT01_0067_G04.b : cgcaggtgtgtgtatgggggggggtacagatgtttgtggtatgtgGACCCAGGGCCCACA
20110601C-001434 : GGTGCGCTTGTCCCACTCCCTTTTTCTGCTCCAGAGCCAGGGACATCGAGGTTTGCAGAG
---------+---------+---------+---------+---------+---------+ 1012
SPLT1_0030_E12.b : tttcccaaccccttttttcccccaaaaccgggatttcggttttcaaatccaagccccctt
SPLT1_0038_A03.b : cgccttgtccccctccctttttcgccccaaacccggaactcaagttttcagattccgggc
UTR01_0026_A05.b :
SPLT1_0042_C07.b : aaaggttcccttgtccccctcccttttttcgtcccaaaacccgggacatacagggttggc
SPLT1_0065_B09.b : gnggaaanagagnggggaannaanttggagaaggagaggaggtaagggggaanggagang
ITT01_0067_G04.b : GGTGCGCTTGTCCCACTCCCTTTTTCTGCTCCAGAGCCAGGGACATCGAGGTTTGCAGAG
20110601C-001434 : TCACAGGCCAGCTCTTCTGGACTCTGTGAGATGGGATTCCTGGTTTCGCTAGTTGGTTCA
---------+---------+---------+---------+---------+---------+ 1072
SPLT1_0030_E12.b : tttggaactgagaagggatttggttttccctttggcccccaaaacccccgccttttccaa
SPLT1_0038_A03.b : cctctttctggacttgtggaagggatcccggtttcccaattggcccacaaaaaatccggc
UTR01_0026_A05.b :
SPLT1_0042_C07.b : gaattcaccggccactcttttttgaaccctggtagaagggattccttggtttcccctgtg
SPLT1_0065_B09.b : gggnannggaggaannggttggcggnanannnanantgangaatttttgttttagattaa
ITT01_0067_G04.b : TCACAGGCCAGCTCTTCTGGACTCTGTGAGATGGGATTCCTGGTTTCGCTAGTTGGTTCA
20110601C-001434 : TCGTAGAGACTCAGGCCACCTTTCCAGCCAGCTTGTGGGCAGTGAGCCCAGCAGCTGACC
---------+---------+---------+---------+---------+---------+ 1132
SPLT1_0030_E12.b : ccctttggggagtgacccccctttacgaattccccctttttcaccggggggagggggtgg
SPLT1_0038_A03.b : ccctttttcaccattttgggagttaccccccatttaacgaattctccctgttcaacacgg
UTR01_0026_A05.b :
SPLT1_0042_C07.b : tgaccaaccaagaaaactaggccccttcaaaccaacttttgttcatgtgcccatgatccg
SPLT1_0065_B09.b : ttgtatagtgttatnttnaagaaaaatagaatttanggttgagttatnataaaggggngt
ITT01_0067_G04.b : TCGTAGAGACTCAGGCCACCTTTCCAGCCAGCTTGTGGGCAGTGAGCCCAGCAGCTGACC
20110601C-001434 : GGAA........................................................
---------+---------+---------+---------+---------+---------+ 1136
SPLT1_0030_E12.b : gggttatnnnnnacncccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
SPLT1_0038_A03.b : gggaggggttgtggttttctttaaacgcattctctaagggccttcttcacgaagtcctcg
UTR01_0026_A05.b :
SPLT1_0042_C07.b : aactgaatccccctcctggttctattcaggagggagggttttgttctgttcctatgaang
SPLT1_0065_B09.b : tgggatnttagattttttaaggagagggttggaaaatgagtggtgtattgtcagagaaag
ITT01_0067_G04.b : GGAAatccgcggcattgttccagcacggggtggaaggttgtggggtgtaatggtagaagg
20110601C-001434 : ............................................................
---------+---------+---------+---------+---------+---------+ 1136
SPLT1_0030_E12.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
SPLT1_0038_A03.b : tctttacatcaccttccgaagcttattttcggcctcctattattactgtactgggcaaat
UTR01_0026_A05.b :
SPLT1_0042_C07.b : gaattatgctaatagtgagatgggggagagttgtatggatgcgaataggncgcagattag
SPLT1_0065_B09.b : taatttaatttcttgcctcagtngttcttttgattcgaagacggatgctgctattatccc
ITT01_0067_G04.b : cacgtcctagggtggggatccttttccaatgatcatttttgttgatggatggaagaaatc
20110601C-001434 : ............................................................
---------+---------+---------+---------+---------+---------+ 1136
SPLT1_0030_E12.b :
SPLT1_0038_A03.b : gnctgtatctatatgcctttgatcatcgcatttattatcgtttg
UTR01_0026_A05.b :
SPLT1_0042_C07.b : acggtagtagagtccgggatagtaccnagaaactgctatgggagatgatatactggcaga
SPLT1_0065_B09.b : taatcgcttagactcattgcgctgtcctctagagaattatacaggtcggaggatagtcgg
ITT01_0067_G04.b : acccaacccgtgatggtaccataaattaagtgcaaaccttttccttccctgatgaaacta
20110601C-001434 : ............................................................
---------+---------+---------+---------+---------+---------+ 1136
SPLT1_0030_E12.b :
SPLT1_0038_A03.b :
UTR01_0026_A05.b :
SPLT1_0042_C07.b : cggggcgatgagctagcagcacacaccgagagaaggcgttatgcacacagtaagcagttg
SPLT1_0065_B09.b : ctaagtctgaatgacctatggtttatagcttactgggggggnctagacgaacaganagtt
ITT01_0067_G04.b : agggaaaatttaaaaaaaaaaaaaaggcccatgggttgactgcagtccgccgcctaaatt
20110601C-001434 : ............................................................
---------+---------+---------+---------+---------+---------+ 1136
SPLT1_0030_E12.b :
SPLT1_0038_A03.b :
UTR01_0026_A05.b :
SPLT1_0042_C07.b : tcccgaatgcagatattgactgtgtatgacgcgagtctcatcatgacaggtc
SPLT1_0065_B09.b : atannannaacnnntagaagaganagntccccancgcannnttttgtaannatatctttc
ITT01_0067_G04.b : tcctgggggccagttatcgtaccagtttttgaaaagggtcctaagggccctttaaacagg
20110601C-001434 : ............................................................
---------+---------+---------+---------+---------+---------+ 1136
SPLT1_0030_E12.b :
SPLT1_0038_A03.b :
UTR01_0026_A05.b :
SPLT1_0042_C07.b :
SPLT1_0065_B09.b : ctgttgaatgtgacccnannngnnnnnnnnnnnnnnnttggnnnnggtgttggggggatt
ITT01_0067_G04.b : cgcgcccctttaaaccctgaggaaacggctctggatttgtaaaacttcttggggggaatt
20110601C-001434 : ............................................................
---------+---------+---------+---------+---------+---------+ 1136
SPLT1_0030_E12.b :
SPLT1_0038_A03.b :
UTR01_0026_A05.b :
SPLT1_0042_C07.b :
SPLT1_0065_B09.b : gtaggtttgcaagaggaggganaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
ITT01_0067_G04.b : ggaaaccccgaattacccgcgaaaatattgtgtaggtaaccccacccgcccagtttccga
20110601C-001434 : ............................................................
---------+---------+---------+---------+---------+---------+ 1136
SPLT1_0030_E12.b :
SPLT1_0038_A03.b :
UTR01_0026_A05.b :
SPLT1_0042_C07.b :
SPLT1_0065_B09.b : nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
ITT01_0067_G04.b : aaataaatacacgaggtttgtgttataancgggtcggccccccggttacccattggttgt
20110601C-001434 : ............................................................
---------+---------+---------+---------+---------+---------+ 1136
SPLT1_0030_E12.b :
SPLT1_0038_A03.b :
UTR01_0026_A05.b :
SPLT1_0042_C07.b :
SPLT1_0065_B09.b :
ITT01_0067_G04.b : acaccccaaagg