[Overview] [RefSeq] [Assembly & SNP] [Alignment]
Assembly Name: 20110601C-002102
Length:
1,034
Sequence:
[FASTA format sequence]
AAAGCGGCTC TGATGCCGGG GGCCTCCGCG GAAGAGGGAA GATGGCGCTT GACGGGCCTG
AGCAGATGGA GCTGGAAGAG GGGAAGGCAG GCAGTGGACT CCGCCAGTAT TATCTGTCCA
AGATTGAAGA ACTCCAGCTG ATTGTGAATG ACAAGAGCCA GAATCTCCGC AGGCTGCAAG
CACAGAGGAA TGAGCTTAAT GCAAAAGTTC GCCTGTTGCG AGAGGAGCTA CAGCTACTGC
AAGAACAGGG CTCCTATGTG GGGGAAGTAG TCCGGGCCAT GGACAAGAAA AAAGTGTTGG
TTAAGGTGCA TCCCGAGGGC AAGTTTGTCG TAGACGTGGA CAAGAACATC GACATCAATG
ATGTGACACC CAACTGCCGG GTGGCTCTCA GAAATGACAG CTACACTTTG CACAAGATCC
TGCCCAACAA GGTAGACCCA CTGGTGTCAC TGATGATGGT GGAGAAAGTG CCAGATTCAA
CTTACGAGAT GATTGGTGGA CTGGACAAGC AGATCAAGGA GATCAAAGAA GTGATCGAGC
TGCCCGTGAA GCATCCTGAG CTCTTTGAAG CGCTGGGCAT TGCACAGCCC AAGGGAGTGC
TGCTATACGG ACCCCCAGGC ACTGGGAAGA CACTGCTGGC CCGAGCTGTG GCCCATCATA
CAGACTGCAC CTTTATTCGC GTCTCTGGCT CTGAGCTGGT ACAGAAATTC ATTGGGGAAG
GGGCAAGGAT GGTGAGGGAG CTGTTTGTCA TGGCCCGAGA ACACGCTCCA TCTATCATCT
TCATGGACGA AATCGACTCC ATTGGCTCCT CGCGGCTGGA AAGGGGCTCT GGAGGGGACA
GTGAAGTCCA GCGCACGATG CTGGAGCTGC TCAACCAGCT GGACGGCTTC GAGGCCACCA
AAAATATCAA GGTTATCATG GCCACTAATA GGATTGACAT CCTGGACTCG GCGCTGCTCC
GCCCAGGGCG CATCGACAGA AAAATTGATT TCCACCCCCC CACGAGAAGG CCCGGCTGGA
CATTTTGAAG ATCC
SNP mapping information
SNP ID | Rel. | Chr. | Location (cM) |
---|
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
PSMC5 | 26S protease regulatory subunit 8 isoform 1 [Homo sapiens]. | 560 | e-162 | O | ||
PSMC5 | 26S protease regulatory subunit 8 isoform 2 [Homo sapiens]. | 543 | e-157 | O | ||
PSMC1 | 26S protease regulatory subunit 4 [Homo sapiens]. | 274 | 1e-73 | |||
PSMC2 | 26S protease regulatory subunit 7 isoform 1 [Homo sapiens]. | 266 | 2e-71 | |||
PSMC6 | 26S protease regulatory subunit 10B [Homo sapiens]. | 260 | 4e-70 | O | ||
PSMC4 | 26S protease regulatory subunit 6B isoform 1 [Homo sapiens]. | 256 | 2e-68 | |||
PSMC4 | 26S protease regulatory subunit 6B isoform 2 [Homo sapiens]. | 253 | 3e-67 | O | ||
PSMC3 | 26S protease regulatory subunit 6A [Homo sapiens]. | 246 | 3e-65 | |||
AFG3L2 | AFG3-like protein 2 [Homo sapiens]. | 164 | 9e-41 | |||
SPATA5 | spermatogenesis-associated protein 5 [Homo sapiens]. | 164 | 9e-41 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
Psmc5 | 26S protease regulatory subunit 8 [Mus musculus]. | 560 | e-162 | O | ||
Psmc1 | 26S protease regulatory subunit 4 [Mus musculus]. | 274 | 9e-74 | |||
Psmc2 | 26S protease regulatory subunit 7 [Mus musculus]. | 266 | 1e-71 | |||
Psmc6 | 26S protease regulatory subunit 10B [Mus musculus]. | 260 | 3e-70 | O | ||
Psmc4 | 26S protease regulatory subunit 6B [Mus musculus]. | 256 | 2e-68 | |||
Psmc3 | 26S protease regulatory subunit 6A [Mus musculus]. | 246 | 3e-65 | |||
Spata5 | spermatogenesis-associated protein 5 isoform 2 [Mus musculus]. | 169 | 3e-42 | |||
Spata5 | spermatogenesis-associated protein 5 isoform 1 [Mus musculus]. | 169 | 3e-42 | |||
Afg3l2 | AFG3-like protein 2 [Mus musculus]. | 164 | 8e-41 | |||
Vcp | transitional endoplasmic reticulum ATPase [Mus musculus]. | 162 | 5e-40 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC480478 | PREDICTED: similar to for proteasomal ATPase (SUG1) isoform 1 [Canis familiaris]. | 560 | e-162 | O | ||
LOC480478 | PREDICTED: similar to for proteasomal ATPase (SUG1) isoform 3 [Canis familiaris]. | 439 | e-126 | O | ||
LOC475896 | PREDICTED: similar to proteasome (prosome, macropain) 26S subunit, ATPase 2 [Canis familiaris]. | 266 | 2e-71 | |||
LOC478703 | PREDICTED: similar to peptidase (prosome, macropain) 26S subunit, ATPase 1 isoform 2 [Canis familiaris]. | 261 | 1e-69 | |||
LOC478522 | PREDICTED: similar to proteasome 26S ATPase subunit 6 [Canis familiaris]. | 260 | 4e-70 | O | ||
LOC476459 | PREDICTED: similar to 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7) isoform 1 [Canis familiaris]. | 256 | 2e-68 | |||
LOC476459 | PREDICTED: similar to 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7) isoform 4 [Canis familiaris]. | 254 | 9e-68 | |||
LOC476459 | PREDICTED: similar to proteasome 26S ATPase subunit 4 isoform 2 isoform 2 [Canis familiaris]. | 253 | 3e-67 | O | ||
LOC476459 | PREDICTED: similar to 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7) isoform 3 [Canis familiaris]. | 247 | 1e-65 | |||
LOC607287 | PREDICTED: similar to 26S protease regulatory subunit 6A (TAT-binding protein 1) (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) [Canis familiaris]. | 246 | 2e-65 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
PSMC5 | 26S protease regulatory subunit 8 [Bos taurus]. | 560 | e-162 | O | ||
PSMC1 | 26S protease regulatory subunit 4 [Bos taurus]. | 274 | 1e-73 | |||
PSMC2 | 26S protease regulatory subunit 7 [Bos taurus]. | 266 | 2e-71 | |||
PSMC6 | 26S protease regulatory subunit 10B [Bos taurus]. | 260 | 4e-70 | O | ||
PSMC4 | 26S protease regulatory subunit 6B [Bos taurus]. | 256 | 2e-68 | |||
PSMC3 | 26S protease regulatory subunit 6A [Bos taurus]. | 246 | 3e-65 | |||
PSMC3 | PREDICTED: proteasome (prosome, macropain) 26S subunit, ATPase, 3 [Bos taurus]. | 237 | 1e-62 | |||
LOC100297992 | PREDICTED: spermatogenesis associated 5-like, partial [Bos taurus]. | 171 | 1e-42 | |||
AFG3L2 | AFG3-like protein 2 [Bos taurus]. | 164 | 2e-40 | |||
VCP | transitional endoplasmic reticulum ATPase [Bos taurus]. | 162 | 6e-40 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
TBP10 | 26S protease regulatory subunit 8 [Sus scrofa]. | 560 | e-162 | O | ||
PSMC1 | PREDICTED: 26S protease regulatory subunit 4 isoform 2 [Sus scrofa]. | 274 | 7e-74 | O | ||
PSMC1 | PREDICTED: 26S protease regulatory subunit 4 isoform 1 [Sus scrofa]. | 274 | 7e-74 | |||
LOC100514865 | PREDICTED: 26S protease regulatory subunit 7-like [Sus scrofa]. | 266 | 1e-71 | |||
LOC100624151 | PREDICTED: 26S protease regulatory subunit 7-like [Sus scrofa]. | 266 | 1e-71 | |||
PSMC6 | PREDICTED: 26S protease regulatory subunit 10B [Sus scrofa]. | 260 | 2e-70 | O | ||
LOC100624452 | PREDICTED: LOW QUALITY PROTEIN: 26S protease regulatory subunit 6B-like [Sus scrofa]. | 256 | 2e-68 | |||
PSMC3 | PREDICTED: 26S protease regulatory subunit 6A [Sus scrofa]. | 246 | 2e-65 | |||
SPATA5 | spermatogenesis-associated protein 5 [Sus scrofa]. | 167 | 1e-41 | |||
VCP | transitional endoplasmic reticulum ATPase [Sus scrofa]. | 160 | 8e-40 |
|
|
20110601C-002102 : ................................AAAGCGGCTCTGATGCCGGGGGCCTCCG
---------+---------+---------+---------+---------+---------+ 28
PCT01_0012_A04.b : nnngggctttnnnnnnncctgcggtggctcggAAAGCGGCTCTGATGCCGGGGGCCTCCG
SKNB1_0058_G01.b : nnngggaannnnnnanaatgcgttggctaggacAAGCGGCTCTGATGCCGGGGGCCTCCG
SKNB1_0069_H10.b : nnnnngggaaannnnnnnnaacctcgttggctcggctctAGCCGGGGGCCTCC*
PCT01_0036_H03.b : nnngggggagaaannanncctgcgttggctcagcggctctgaGCCGGGGGCCTCCG
SKNB1_0022_H10.b : nnnggggaannnnnacccaa
20110601C-002102 : CGGAAGAGGGAAGATGGCGCTTGACGGGCCTGAGCAGATGGAGCTGGAAGAGGGGAAGGC
---------+---------+---------+---------+---------+---------+ 88
PCT01_0012_A04.b : CGGAAGAGGGAAGATGGCGCTTGACGGGCCTGAGCAGATGGAGCTGGAAGAGGGGAAGGC
SKNB1_0058_G01.b : CGGAAGAGGGAAGATGGCGCTTGACGGGCCTGAGCAGATGGAGCTGGAAGAGGGGAAGGC
SKNB1_0069_H10.b : CGGAAGAGGGAAGATGGCGCTTGACGGGCCTGAGCAGATGGAGCTGGAAGAGGGGAAGGC
PCT01_0036_H03.b : CGGAAGAGGGAAGATGGCGCTTGACGGGCCTGAGCAGATGGAGCTGGAAGAGGGGAAGGC
SKNB1_0022_H10.b : cgttggctctggagaGGCGCTTGACGGGCCTGAGCAGATGGAGCTGGAAGAGGGGAACGC
20110601C-002102 : AGGCAGTGGACTCCGCCAGTATTATCTGTCCAAGATTGAAGAACTCCAGCTGATTGTGAA
---------+---------+---------+---------+---------+---------+ 148
PCT01_0012_A04.b : AGGCAGTGGACTCCGCCAGTATTATCTGTCCAAGATTGAAGAACTCCAGCTGATTGTGAA
SKNB1_0058_G01.b : AGGCAGTGGACTCCGCCAGTATTATCTGTCCAAGATTGAAGAACTCCAGCTGATTGTGAA
SKNB1_0069_H10.b : AGGCAGTGGACTCCGCCAGTATTATCTGTCCAAGATTGAAGAACTCCAGCTGATTGTGAA
PCT01_0036_H03.b : AGGCAGTGGACTCCGCCAGTATTATCTGTCCAAGATGGAAGAACTCCAGCTGATTGTGAA
SKNB1_0022_H10.b : ATTCAGTGGACTCCGCCAGTATTATCTGTCCAAGATTGAACAACTCCAGCTGATTGTGAA
20110601C-002102 : TGACAAGAGCCAGAATCTCCGCAGGCTGCAAGCACAGAGGAATGAGCTTAATGCAAAAGT
---------+---------+---------+---------+---------+---------+ 208
PCT01_0012_A04.b : TGACAAGAGCCAGAATCTCCGCAGGCTGCAAGCACAGAGGAATGAGCTTAATGCAAAAGT
SKNB1_0058_G01.b : TGACAAGAGCCAGAATCTCCGCAGGCTGCAAGCACAGAGGAATGAGCTTAATGCAAAAGT
SKNB1_0069_H10.b : TGACAAGAGCCAGAATCTCCGCAGGCTGCAAGCACAGAGGAATGAGCTTAATGCAAAAGT
PCT01_0036_H03.b : TGACAAGAGCCAGAATCTCCGCAGGCTGCAAGCACAGAGGAATGAGCTTAATGCAAAAGT
SKNB1_0022_H10.b : TGACAAGAGCCAGAATCTCCGCAGGCTGCAAGCACAGAGGAATGAGCTTAATGCAAAAGT
20110601C-002102 : TCGCCTGTTGCGAGAGGAGCTACAGCTACTGCAAGAACAGGGCTCCTATGTGGGGGAAGT
---------+---------+---------+---------+---------+---------+ 268
PCT01_0012_A04.b : TCGCCTGTTGCGAGAGGAGCTACAGCTACTGCAAGAACAGGGCTCCTATGTGGGGGAAGT
SKNB1_0058_G01.b : TCGCCTGTTGCGAGAGGAGCTACAGCTACTGCAAGAACAGGGCTCCTATGTGGGGGAAGT
SKNB1_0069_H10.b : TCGCCTGTTGCGAGAGGAGCTACAGCTACTGCAAGAACAGGGCTCCTATGTGGGGGAAGT
PCT01_0036_H03.b : TCGCCTGTTGCGAGAGGAGCTACAGCTACTGCAAGAACAGGGCTCCTATGTGGGGGAAGT
SKNB1_0022_H10.b : TCGCCTGTTGCGAGAGGAGCTACAGCTACTGCAAGAACAGGGCTCCTATGTGGGGGAAGT
20110601C-002102 : AGTCCGGGCCATGGACAAGAAAAAAGTGTTGGTTAAGGTGCATCCCGAGGGCAAGTTTGT
---------+---------+---------+---------+---------+---------+ 328
PCT01_0012_A04.b : AGTCCGGGCCATGGACAAGAAAAAAGTGTTGGTTAAGGTGCATCCCGAGGGCAAGTTTGT
SKNB1_0058_G01.b : AGTCCGGGCCATGGACAAGAAAAAAGTGTTGGTTAAGGTGCATCCCGAGGGCAAGTTTGT
SKNB1_0069_H10.b : AGTCCGGGCCATGGACAAGAAAAAAGTGTTGGTTAAGGTGCATCCCGAGGGCAAGTTTGT
PCT01_0036_H03.b : AGTCCGGGCCATGGACAAGAAAAAAGTGTTGGTTAAGGTGCATCCCGAGGGCAAGTTTGT
SKNB1_0022_H10.b : AGTCCGGGCCATGGACAAGAAAAAAGTGTTGGTTAAGGTGCATCCCGAGGGCAAGTTTGT
20110601C-002102 : CGTAGACGTGGACAAGAACATCGACATCAATGATGTGACACCCAACTGCCGGGTGGCTCT
---------+---------+---------+---------+---------+---------+ 388
PCT01_0012_A04.b : CGTAGACGTGGACAAGAACATCGACATCAATGATGTGACACCCAATTGCCGGGTGGCTCT
SKNB1_0058_G01.b : CGTAGACGTGGACAAGAACATCGACATCAATGATGTGACACCCAACTGCCGGGTGGCTCT
SKNB1_0069_H10.b : CGTAGACGTGGACAAGAACATCGACATCAATGATGTGACACCCAACTGCCGGGTGGCTCT
PCT01_0036_H03.b : CGTAGACGTGGACAAGAACATCGACATCAATGATGTGACACCCAATTGCCGGGTGGCTCT
SKNB1_0022_H10.b : CGTAGACGTGGACAAGAACATCGACATCAATGATGTGACACCCAACTGCCGGGTGGCTCT
20110601C-002102 : CAGAAATGACAGCTACACTTTGCACAAGATCCTGCCCAACAAGGTAGACCCACTGGTGTC
---------+---------+---------+---------+---------+---------+ 448
PCT01_0012_A04.b : CAGAAATGATAGCTACACTTTGCACAAGATCCTGCCCAACAAGGTAGACCCACTGGTGTC
SKNB1_0058_G01.b : CAGAAATGACAGCTACACTTTGCACAAGATCCTGCCCAACAAGGTAGACCCACTGGTGTC
SKNB1_0069_H10.b : CAGAAATGACAGCTACACTTTGCACAAGATCCTGCCCAACAAGGTAGACCCACTGGTGTC
PCT01_0036_H03.b : CAGAAATGATAGCTACACTTTGCACAAGATCCTGCCCAACAAGGTAGACCCACTGGTGTC
SKNB1_0022_H10.b : CAGAAATGACAGCTACACTTTGCACAAGATCCTGCCCAACAAGGTAGACCCACTGGTGTC
20110601C-002102 : ACTGATGATGGTGGAGAAAGTGCCAGATTCAACTTACGAGATGATTGGTGGACTGGACAA
---------+---------+---------+---------+---------+---------+ 508
PCT01_0012_A04.b : ACTGATGATGGTGGAGAAAGTGCCAGATTCAACTTACGAGATGATTGGTGGACTGGACAA
SKNB1_0058_G01.b : ACTGATGATGGTGGAGAAAGTGCCAGATTCAACTTACGAGATGATTGGTGGACTGGACAA
SKNB1_0069_H10.b : ACTGATGATGGTGGAGAAAGTGCCAGATTCAACTTACGAGATGATTGGTGGACTGGACAA
PCT01_0036_H03.b : ACTGATGATGGTGGAGAAAGTGCCAGATTCAACTTACGAGATGATTGGTGGACTGGACAA
SKNB1_0022_H10.b : ACTGATGATGGTGGAGAAAGTGCCAGATTCAACTTACGAGATGATTGGTGGACTGGACAA
20110601C-002102 : GCAGATCAAGGAGATCAAAGAAGTGATCGAGCTGCCCGTGAAGCATCCTGAGCTCTTTGA
---------+---------+---------+---------+---------+---------+ 568
PCT01_0012_A04.b : GCAGATCAAGGAGATCAAAGAAGTGATCGAGCTGCCCGTGAAGCATCCTGAGCTCTTTGA
SKNB1_0058_G01.b : GCAGATCAAGGAGATCAAAGAAGTGATCGAGCTGCCCGTGAAGCATCCTGAGCTCTTTGA
SKNB1_0069_H10.b : GCAGATCAAGGAGATCAAAGAAGTGATCGAGCTGCCCGTGAAGCATCCTGAGCTCTTTGA
PCT01_0036_H03.b : GCAGATCAAGGAGATCAAAGAAGTGATCGAGCTGCCCGTGAAGCATCCTGAGCTCTTTGA
SKNB1_0022_H10.b : GCAGATCAAGGAGATCAAAGAAGTGATCGAGCTGCCCGTGAAGCATCCTGAGCTCTTTGA
20110601C-002102 : AGCGCTGGGCATTGCACAGCCCAAGGGAGTGCTGCTATACGGACCCCCAGGCACTGGGAA
---------+---------+---------+---------+---------+---------+ 628
PCT01_0012_A04.b : AGCGCTGGGCATTGCACAGCCCAAGGGAGTGCTGCTATACGGACCCCCAGGCACTGGGAA
SKNB1_0058_G01.b : AGCGCTGGGCATTGCACAGCCCAAGGGAGTGCTGCTATACGGACCCCCAGGCACTGGGAA
SKNB1_0069_H10.b : AGCGCTGGGCATTGCACAGCCCAAGGGAGTGCTGCTATACGGACCCCCAGGCACTGGGAA
PCT01_0036_H03.b : AGCGCTGGGCATTGCACAGCCCAAGGGAGTGCTGCTATACGGACCCCCAGGCACTGGGGA
SKNB1_0022_H10.b : AGCGCTGGGCATTGCACAGCCCAAGGGAGTGCTGCTATACGGACCCCCAGGCACTGGGAA
20110601C-002102 : GACACTGCTGGCCCGAGCTGTGGCCCATCATACAGACTGCACCTTTATTCGCGTCTCTGG
---------+---------+---------+---------+---------+---------+ 688
PCT01_0012_A04.b : GACACTGCTGGCCCGAGCTGTGGCCCATCATACAGACTGCACCTTTATTCGCGTCTCTGG
SKNB1_0058_G01.b : GACACTGCTGGCCCGAGCTGTGGCCCATCATACAGACTGCACCTTTATTCGCGTCTCTGG
SKNB1_0069_H10.b : GACACTGCTGGCCCGAGCTGTGGCCCATCATACAGACTGCACCTTTATTCGCGTCTCTGG
PCT01_0036_H03.b : GACACTGCTGGCCCGAGCTGTGGCCCATCATACAGACTGCACCTTTATTCGCGTCTCTGG
SKNB1_0022_H10.b : GACACTGCTGGCCCGAGCTGTGGCCCATCATACAGACTGCACCTTTATTCGCGTCTCTGG
20110601C-002102 : CTCTGAGCTGGTACAGAAA*TTCATTGGGGAAGGGGCAAGGATGGTGA*GGGAGCTGTTT
---------+---------+---------+---------+---------+---------+ 746
PCT01_0012_A04.b : CTCTGAGCTGGTACAGAAA*TTCATTGGGGAAGGGGCAAGGATGGTGA*GGGAGCTGTTT
SKNB1_0058_G01.b : CTCTGAGCTGGTACAGAAAATTCATTGGGGAAGGGGCAAGGATGGTGANGGNAGCTGTTT
SKNB1_0069_H10.b : CTCTGAGCTGGTACAGAAA*TTCATTGGGGAAGGGGCAAGGATGGTGAGGGGAGCTGTTT
PCT01_0036_H03.b : CTCTGAGCTGGTACAGAAA*TTCATTGGGGAAGGGGCAAGGATGGTGA*GGAAGCTGTTT
SKNB1_0022_H10.b : CTCTGAGCTGGTACAGAAA*TTCATTGGGGAAGGGGCAAGGATGGTGA*GGGAGCTGTTT
20110601C-002102 : GTCATGGCCCGAGAACACGCTCCATCTATCATCTTCATGGACGAAATCGACTCCATTGGC
---------+---------+---------+---------+---------+---------+ 806
PCT01_0012_A04.b : GTCATGGCCCGAGAACACGCTCCATCTATCATCTTCATGGACGAAATCGACTCCATTGGC
SKNB1_0058_G01.b : GTCATGGCCCGAGAACACGCTCCATCTATCATCTTCATGGACGAAATCGACTCCATTGGC
SKNB1_0069_H10.b : GTCATGGCCCGAGAACACGCTCCATCTATCATCTTCATGGACGAAATCGACTCCATTGGC
PCT01_0036_H03.b : GTCATGGCCCGAGAACACGCTCCATCTATCATCTTCATGGACGAAATCGACTCCATTGGC
SKNB1_0022_H10.b : GTCATGGCCCGAGAACACGCTCCATCTATCATCTTCATGGACGAAATCGACTCCATTGGC
20110601C-002102 : TCCTCGCGGCTGGAAAGGGGCTCTGGA*GGGGACAGTGAAGTCCAGCGCACGATGCTGGA
---------+---------+---------+---------+---------+---------+ 865
PCT01_0012_A04.b : TCCTCGCGGCTGGAAAGGGGCTCTGGG*AGGGACAGTGAAGTCCAGCGCACGATGCTGGA
SKNB1_0058_G01.b : TCCTCGCGGCTGGAAGGGGGCTCTGGANGGGNACAGTGAAGTCCAGCGCACGATGCTGGA
SKNB1_0069_H10.b : TCCTCGCGGCTGGAAGGGGGCTCTGGAGGGGNACAGTGAAGTCCAGCGCACGATGCTGGA
PCT01_0036_H03.b : TCCTCGCGGCCTGGNGGGGGCTCTGGA*GGGGACAATGAAATCCAcgcaacatgctggaa
SKNB1_0022_H10.b : TCCTCGCGGCTGGGAAGGGGCTCTGGA*GGAGACAGTGAAGTCCAGCGCACGATGCTGGA
20110601C-002102 : GCTGCTCAACCAGCTGGACGGCTTCGAGGCCACCAAAAATATCAAGGTTATCATGGCCAC
---------+---------+---------+---------+---------+---------+ 925
PCT01_0012_A04.b : GCTGCTCAACCAGCTGGACGGCTTCGAGGCCACCAAAAATATCAGGGTAATCATGGCCAC
SKNB1_0058_G01.b : GCTGCTNCACCAGCTGGACGGCTTCNAGGCCAC*AAAAATATCAAGGGTATCATGGCCAC
SKNB1_0069_H10.b : GCTGNCTCACCAGCTGGACGGCTTCGAGGCCACCAA*AATATCAAGGTTATCATGGCCAC
PCT01_0036_H03.b : ctggtcaacagctggaacgcttcaaggcccccaaaaattcaagggttatctggccccaaa
SKNB1_0022_H10.b : GCTGCTCAACCAGCTGGACGGCTTCGAGGCCACCAA*AATATCAAGGTTATCATGGCCAC
20110601C-002102 : TAATAGGATTGACATCCTGGACTCGGCGCTGCTCCGCCCAGGGCGCATCGACAGAAAAAT
---------+---------+---------+---------+---------+---------+ 985
PCT01_0012_A04.b : TANTAGGATTGACATCCTGGGACTCGCGCTGCTCCGCCCAGGGCGCATCGACAGAAAATT
SKNB1_0058_G01.b : TAATANGATTGACATCCTGGACTCGGCGCTGCTCCGCCCAGGGCGCATCGACAGAAAAAT
SKNB1_0069_H10.b : TAATAGGATTGACATCCTGGACTCGGCGCTGCTCCGCCCAGGGCGCATCGACAGAAAAAT
PCT01_0036_H03.b : aggattggaatcctggaactcggccttctccgcccaggggcttcccaaaaaaaattgatt
SKNB1_0022_H10.b : TAATAGGATTGACATCCTGGAACTCGCGCTGCTCCGCCCAGGGCGCATCGACAGAAAAAT
20110601C-002102 : TGATTTCCACCCCCCCACGAGAAGGCCCGGCTGGACATTTTGAAGATCC...........
---------+---------+---------+---------+---------+---------+ 1034
PCT01_0012_A04.b : GAATTTCCCACCCCCAACGAGGAGGCCCGGCTGGAACTTTTGAAGATCCtttctcgaaaa
SKNB1_0058_G01.b : TGATTCCCACCCCCCCACGAGAAGGCCggctggaacatttgnaagaacatttctcgaaaa
SKNB1_0069_H10.b : TGAATCCCACCCCCCaccagaagggcgggctggacattttgaagatccattctcggaaat
PCT01_0036_H03.b : tcccccccaaaagggaagcccgcgggaatttttaaaatctttcccgaaaagaacttaccc
SKNB1_0022_H10.b : TGAATTCCCACCCCCCACGAGGAGGCCCGGCTGGACATTTTGaagaatcattctcggaaa
20110601C-002102 : ............................................................
---------+---------+---------+---------+---------+---------+ 1034
PCT01_0012_A04.b : tgaacttgaaccggggcatcaactggaaaaaattgttgactcttgcaggacctccgggcc
SKNB1_0058_G01.b : atgaactgaccgggggcatcaacctgagaaaaatggttgactcttgcccggacacaaagg
SKNB1_0069_H10.b : gaanctgaaccgggcatcaactgagaaaaatgttgaactctgcccggacatacgccctta
PCT01_0036_H03.b : gggctccccccaaaaaaatttttaattttcccaaaatctgggttaaaaaaagggggtggc
SKNB1_0022_H10.b : agaaacctgaccgggggcatcagcctgaaaaaaattgctgaactcaagccaggagcatca
20110601C-002102 : ............................................................
---------+---------+---------+---------+---------+---------+ 1034
PCT01_0012_A04.b : taaatgaaggggtgtggccccacccggattgtacccttgccaaggggatccccttccccg
SKNB1_0058_G01.b : ctaaaattaaaagggtggggccccaaccggctgtatcccttggccgaagggaaacccctt
SKNB1_0069_H10.b : aataaagggcgggggcccaaaccccttgtacccttcccaaacgaaaccccttccccccca
PCT01_0036_H03.b : cccaacccggtttacccctccaaaaggaactcctctcccacaaattttaaggcgccccca
SKNB1_0022_H10.b : ggcccctaaaatgaagggcg
20110601C-002102 : ............................................................
---------+---------+---------+---------+---------+---------+ 1034
PCT01_0012_A04.b : gaggaattaaatgccctacccgggttgcaaagacgggaaaacatgccctcaaacttggaa
SKNB1_0058_G01.b : ccccccgggaattttgatggggctacccgggcctggcaaaggaacccgaaaaatgctcct
SKNB1_0069_H10.b : aattttaatgccctacccggcctcccaaagaccgaaaaattctctta
PCT01_0036_H03.b : gcttcaaaaagacaaaaaaaatttccccaaatttaagggggggggttttttggtttcccc
SKNB1_0022_H10.b :
20110601C-002102 : ............................................................
---------+---------+---------+---------+---------+---------+ 1034
PCT01_0012_A04.b : gggggggggttctctggatcctcaaaaaatctggaaaaaaaaaaaaaagccattttcttt
SKNB1_0058_G01.b : ta
SKNB1_0069_H10.b :
PCT01_0036_H03.b : aaaaagggggagaaaaaaaaaaaaaaaaaaaaagggttgggtgggggggcgcaaaaaaaa
SKNB1_0022_H10.b :
20110601C-002102 : ............................................................
---------+---------+---------+---------+---------+---------+ 1034
PCT01_0012_A04.b : tgggcgcgcaaaaaataaaaacccccccctcaaaaaaaaaaagattttgttttttttttt
SKNB1_0058_G01.b :
SKNB1_0069_H10.b :
PCT01_0036_H03.b : aaaacccccccccaaaaaaaaaatttttttttttttttttaaaaaaaaaaaaaaaaaaat
SKNB1_0022_H10.b :
20110601C-002102 : ............................................................
---------+---------+---------+---------+---------+---------+ 1034
PCT01_0012_A04.b : ttgttaaaaaaccaccaaaaattttttttttgtggaaaatatttgccgggaaatatctcc
SKNB1_0058_G01.b :
SKNB1_0069_H10.b :
PCT01_0036_H03.b : tttttttttatataagacagcaccccccccgccccccct
SKNB1_0022_H10.b :
20110601C-002102 : ............................................................
---------+---------+---------+---------+---------+---------+ 1034
PCT01_0012_A04.b : cctctggggccgnnnnnnttgatgnnanaggnnnnnnnnnnnaaaaaagcgtcttgtcct
SKNB1_0058_G01.b :
SKNB1_0069_H10.b :
PCT01_0036_H03.b :
SKNB1_0022_H10.b :
20110601C-002102 : ............................................................
---------+---------+---------+---------+---------+---------+ 1034
PCT01_0012_A04.b : tcctcttctcnt
SKNB1_0058_G01.b :
SKNB1_0069_H10.b :
PCT01_0036_H03.b :
SKNB1_0022_H10.b :