[Overview] [RefSeq] [Assembly & SNP] [Alignment]
Assembly Name: 20110601C-002479
Length:
1,106
Sequence:
[FASTA format sequence]
CTTCAGACGC CAGTGGATCT GCAGCTGTTG ACTGCGCCCG CCGCAGATCT TTGAAGCATG
AATCCTTCAC TCCTCCTGGC TGCCTTTTGC TTGGGAATAG CCTCAGCTGC TCCAAGACAT
GATCACAGTT TAGATGCAGA CTGGTACAAG TGGAAGGCAA CACACAGGAA ACTCTATGGC
TTGAATGAAG AAGGAAGGCG GAGAGCCATA TGGGAGAAGA ACATGAAAAT GATTGAACGA
CACAATTGGG AACACAGGCA AGGGAAACAT AGCTTCACCA TGGCCATGAA TGCCTTTGGT
GACATGACCA ATGAAGAATT CAGGAAGACG ATGAATGGTT TTCAAAACCA GAAGCACAAG
AAGGGAAAAG TATTCCTTGA CGCTGGCTCT GCTTTGACCC CCCATTCTGT GGATTGGAGA
GAGAAAGGCT ATGTAACTGC TGTGAAGAAT CAGGGTCACT GTGGTTCTTG TTGGGCTTTT
AGTGCCACCG GCGCCCTCGA AGGACAGATG TTCCGGAAAA CCAGCAAACT TATTTCACTG
AGTGAGCAGA ACCTGGTGGA CTGCTCTTGG CCTGAGGGCA ATGAGGGCTG CAATGGTGGC
CTAATGGATA ATGCCTTCCA GTACATTAAG GACAACGGAG GCCTGGACTC AGAGGAATCC
TATCCATACT TTGGAAAGGA TGGATCCTGC AAATACAAGC CCCAGAGTTC TGCTGCCAAC
GACACTGGTT ACGTGGATAT TCCAAAGCAG GAGAAAGCGC TTATGAAGGC CGTGGCAACT
GTGGGGCCCA TCTCTGTTGG TATAGATGCA AGCCATGAAT CCTTCCAGTT TTACAGCACA
GGCATTTATT TTGAACCACA GTGCAGCAGC GAAGACCTGG ATCATGGCGT TCTGGTGGTC
GGCTATGGCG TTGAAGGAGC ACACTCAAAT AATAAGTATT GGCTTGTNCA GAACAGCTGG
GGTAATACTT GGGGCATGGA TGGCTACATA AAGATGACCA AAGATCAGAA CACCACTGTG
GAATCGCCCA CATGGCCAGT TACCCTGTGG TCTAAATCTC NAAGACTGGA TTAGAACAGA
ATAGCCCGAG GACAATTCTG TCTTCA
SNP mapping information
SNP ID | Rel. | Chr. | Location (cM) |
---|
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
CTSL1 | cathepsin L1 preproprotein [Homo sapiens]. | 521 | e-148 | O | ||
CTSL1 | cathepsin L1 preproprotein [Homo sapiens]. | 521 | e-148 | O | ||
CTSL2 | cathepsin L2 preproprotein [Homo sapiens]. | 494 | e-140 | O | ||
CTSL2 | cathepsin L2 preproprotein [Homo sapiens]. | 494 | e-140 | O | ||
CTSK | cathepsin K preproprotein [Homo sapiens]. | 320 | 1e-87 | O | ||
CTSS | cathepsin S isoform 1 preproprotein [Homo sapiens]. | 299 | 4e-81 | O | ||
CTSS | cathepsin S isoform 2 preproprotein [Homo sapiens]. | 248 | 9e-66 | O | ||
CTSH | pro-cathepsin H preproprotein [Homo sapiens]. | 223 | 8e-59 | O | ||
CTSF | cathepsin F precursor [Homo sapiens]. | 174 | 1e-43 | |||
CTSO | cathepsin O preproprotein [Homo sapiens]. | 144 | 2e-34 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
Ctsl | cathepsin L1 preproprotein [Mus musculus]. | 484 | e-138 | O | ||
Ctsll3 | cathepsin L-like 3 [Mus musculus]. | 431 | e-121 | O | ||
BC051665 | hypothetical protein LOC218275 [Mus musculus]. | 430 | e-121 | O | ||
4930486L24Rik | testin-2 precursor [Mus musculus]. | 407 | e-115 | O | ||
Cts6 | cathepsin 6 [Mus musculus]. | 371 | e-103 | O | ||
Ctsr | cathepsin R precursor [Mus musculus]. | 364 | e-101 | O | ||
Cts8 | cathepsin 8 [Mus musculus]. | 363 | e-101 | O | ||
Ctsm | cathepsin M precursor [Mus musculus]. | 363 | e-100 | O | ||
LOC640171 | PREDICTED: cathepsin M-like [Mus musculus]. | 357 | 9e-99 | O | ||
Ctsj | cathepsin J [Mus musculus]. | 353 | 2e-98 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
CTSL2 | cathepsin L1 precursor [Canis lupus familiaris]. | 536 | e-153 | O | ||
LOC484140 | PREDICTED: similar to Cathepsin L precursor (Major excreted protein) (MEP) [Canis familiaris]. | 461 | e-130 | O | ||
LOC612231 | PREDICTED: similar to Cathepsin L2 precursor (Cathepsin V) (Cathepsin U) [Canis familiaris]. | 345 | 3e-96 | O | ||
CTSK | cathepsin K precursor [Canis lupus familiaris]. | 320 | 2e-87 | O | ||
CTSS | cathepsin S precursor [Canis lupus familiaris]. | 298 | 8e-81 | O | ||
LOC479065 | PREDICTED: similar to Cathepsin H precursor [Canis familiaris]. | 205 | 2e-53 | O | ||
LOC476010 | PREDICTED: similar to Cathepsin F precursor (CATSF) [Canis familiaris]. | 171 | 9e-43 | |||
LOC482665 | PREDICTED: similar to Cathepsin O precursor [Canis familiaris]. | 139 | 6e-33 | |||
LOC483725 | PREDICTED: similar to cathepsin W preproprotein [Canis familiaris]. | 124 | 2e-28 | O | ||
CTSC | dipeptidyl peptidase 1 [Canis lupus familiaris]. | 110 | 2e-24 |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
CTSL2 | cathepsin L2 precursor [Bos taurus]. | 506 | e-144 | O | ||
CTSL1 | cathepsin L1 [Bos taurus]. | 504 | e-144 | O | ||
CTSK | cathepsin K [Bos taurus]. | 318 | 7e-87 | O | ||
CTSS | cathepsin S precursor [Bos taurus]. | 302 | 3e-82 | O | ||
CTSH | pro-cathepsin H precursor [Bos taurus]. | 214 | 7e-56 | O | ||
CTSF | cathepsin F [Bos taurus]. | 171 | 1e-42 | |||
CTSO | PREDICTED: cathepsin O preproprotein-like [Bos taurus]. | 138 | 1e-32 | |||
CTSO | PREDICTED: cathepsin O [Bos taurus]. | 138 | 1e-32 | |||
CTSC | dipeptidyl peptidase 1 [Bos taurus]. | 108 | 8e-24 | |||
CTSB | cathepsin B precursor [Bos taurus]. | 87.4 | 2e-17 | O |
Locus | Definition | Score | E value | FL | ||
---|---|---|---|---|---|---|
LOC100515919 | PREDICTED: cathepsin L1-like [Sus scrofa]. | 676 | 0.0 | O | ||
CTSL1 | cathepsin L1 precursor [Sus scrofa]. | 532 | e-152 | O | ||
CTSK | cathepsin K precursor [Sus scrofa]. | 318 | 3e-87 | O | ||
LOC100627406 | PREDICTED: cathepsin S-like [Sus scrofa]. | 294 | 7e-80 | O | ||
LOC100153090 | PREDICTED: cathepsin S [Sus scrofa]. | 294 | 7e-80 | O | ||
CTSH | pro-cathepsin H precursor [Sus scrofa]. | 216 | 6e-57 | O | ||
CTSF | PREDICTED: cathepsin F [Sus scrofa]. | 183 | 1e-46 | |||
LOC100525853 | PREDICTED: cathepsin W-like [Sus scrofa]. | 135 | 4e-32 | O | ||
TDO | PREDICTED: tryptophan 2,3-dioxygenase [Sus scrofa]. | 121 | 8e-28 | |||
LOC100522387 | PREDICTED: dipeptidyl peptidase 1-like [Sus scrofa]. | 104 | 1e-22 |
|
|
20110601C-002479 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
TCH01_0098_B06.b :
DCI01_0009_H08.b : aatctatggctatcttxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0005_D12.b : tttcgtacgatxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0043_H03.b :
DCI01_0107_D07.b :
DCI01_0080_B03.b :
20110601C-002479 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
TCH01_0098_B06.b : nnggctaggactatgacxxxxxxxxxxxxxxxxxxxxxx
DCI01_0009_H08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0005_D12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0043_H03.b :
DCI01_0107_D07.b :
DCI01_0080_B03.b :
20110601C-002479 : ..........................................CTTCAGACGCCAGTGGAT
---------+---------+---------+---------+---------+---------+ 18
TCH01_0098_B06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTTCAGACGCCAGTGGAT
DCI01_0009_H08.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTTCAGACGCCAGTGGAT
DCI01_0005_D12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGTGGAT
DCI01_0043_H03.b : gtaactaaxxxxx
DCI01_0107_D07.b :
DCI01_0080_B03.b :
20110601C-002479 : CTGCAGCTGTTGACTGCGCCCGCCGCAGATCTTTGAAGCATGAATCCTTCACTCCTCCTG
---------+---------+---------+---------+---------+---------+ 78
TCH01_0098_B06.b : CTGCAGCTGTTGACTGCGCCCGCCGCAGATCTTTGAAGCATGAATCCTTCACTCCTCCTG
DCI01_0009_H08.b : CTGCAGCTGTTGACTGCGCCCGCCGCAGATCTTTGAAGCATGAATCCTTCACTCCTCCTG
DCI01_0005_D12.b : CTGCAGCTGTTGACTGCGCCCGCCGCAGATCTTTGAAGCATGAATCCTTCACTCCTCCTG
DCI01_0043_H03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0107_D07.b : nnnggtaaaannnnaccgatatcttagggctxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0080_B03.b :
20110601C-002479 : GCTGCCTTTTGCTTGGGAATAGCCTCAGCTGCTCCAAGACATGATCACAGTTTAGATGCA
---------+---------+---------+---------+---------+---------+ 138
TCH01_0098_B06.b : GCTGCCTTTTGCTTGGGAATAGCCTCAGCTGCTCCAAGACATGATCACAGTTTAGATGCA
DCI01_0009_H08.b : GCTGCCTTTTGCTTGGGAATAGCCTCAGCTGCTCCAAGACATGATCACAGTTTAGATGCA
DCI01_0005_D12.b : GCTGCCTTTTGCTTGGGAATAGCCTCAGCCGCTCCAAGACATGATCACAGTTTAGATGCA
DCI01_0043_H03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0107_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
DCI01_0080_B03.b : nggcgaaaannnnnccgatacataxxxxxxxxxxxxxxxxxxxx
20110601C-002479 : GACTGGTACAAGTGGAAGGCAACACACAGGAAACTCTATGGCTTGAATGAAGAAGGAAGG
---------+---------+---------+---------+---------+---------+ 198
TCH01_0098_B06.b : GACTGGTACAAGTGGAAGGCAACACACAGGAAACTCTATGGCTTGAATGAAGAAGGAAGG
DCI01_0009_H08.b : GACTGGTACAAGTGGAAGGCAACACACAGGAAACTCTATGGCTTGAATGAAGAAGGAAGG
DCI01_0005_D12.b : GACTGGTACAAGTGGAAGGCAACACACAGGAAACTCTATGGCTTGAATGAAGAAGGAAGG
DCI01_0043_H03.b : xxxxxxxxxxxxxxxxxxxxAACACACAGGAAACTCTATGGCTTGAATGAAGAAGGAAGG
DCI01_0107_D07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAAGGAAGG
DCI01_0080_B03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-002479 : CGGAGAGCCATATGGGAGAAGAACATGAAAATGATTGAACGACACAATTGGGAACACAGG
---------+---------+---------+---------+---------+---------+ 258
TCH01_0098_B06.b : CGGAGAGCCATATGGGAGAAGAACATGAAAATGATTGAACGACACAATTGGGAACACAGG
DCI01_0009_H08.b : CGGAGAGCCATATGGGAGAAGAACATGAAAATGATTGAACGACACAATTGGGAACACAGG
DCI01_0005_D12.b : CGGAGAGCCATATGGGAGAAGAACATGAAAATGATTGAACGACACAATTGGGAACACAGG
DCI01_0043_H03.b : CGGAGAGCCGTATGGGAGAAGAACATGAAAATGATTGAACGGCACAATTGGGAACACAGG
DCI01_0107_D07.b : CGGAGAGCCGTATGGGAGAAGAACATGAAAATGATTGAACGGCACAATTGGGAACACAGG
DCI01_0080_B03.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-002479 : CAAGGGAAACATAGCTTCACCATGGCCATGAATGCCTTTGGTGACATGACCAATGAAGAA
---------+---------+---------+---------+---------+---------+ 318
TCH01_0098_B06.b : CAAGGGAAACATAGCTTCACCATGGCCACGAATGCCTTTGGTGACATGACCAATGAAGAA
DCI01_0009_H08.b : CAAGGGAAACATAGCTTCACCATGGCCATGAATGCCTTTGGTGACATGACCAATGAAGAA
DCI01_0005_D12.b : CAAGGGAAACATAGCTTCACCATGGCCATGAGCGCCTTTGGTGACATGACCAATGAAGAA
DCI01_0043_H03.b : CAAGGGAAACATAGCTTCACCATGGCCATGAATGCCTTTGGTGACATGACCAATGAAGAA
DCI01_0107_D07.b : CGAGGGAAACATAGCTTCACCATGGCCATGAATGCCTTTGGTGACATGACCAATGAAGAA
DCI01_0080_B03.b : xxxxxxAAACATAGCTTCACCATGGCCATGAATGCCTTTGGTGACATGACCAATGAAGAA
20110601C-002479 : TTCAGGAAGACGATGAATGGTTTTCAAAACCAGAAGCACAAGAAGGGAAAAGTATTCCTT
---------+---------+---------+---------+---------+---------+ 378
TCH01_0098_B06.b : TTCAGGAAGACGATGAATGGTTTTCAAAACCAGAAGCACAAGAAGGGAAAAGTATTCCTT
DCI01_0009_H08.b : TTCAGGAAGACGATGAATGGTTTTCAAAACCAGAAGCACAAGAAGGGAAAAGTATTCCTT
DCI01_0005_D12.b : TTCAGGAAGACGATGAATGGTTTTCAAAACCAGAAGCACAAGAAGGGAAAAGTATTCCTT
DCI01_0043_H03.b : TTCAGGAAGACGATGAATGGTTTTCAAAACCAGAAGCACAAGAAGGGAAAAGTATTCCTT
DCI01_0107_D07.b : TTCAGGAAGACGATGAATGGTTTTCAAAACCAGAAGCACAAGAAGGGAAAAGTATTCCTT
DCI01_0080_B03.b : TTCAGGAAGACGATGAATGGTTTTCAAAACCAGAAGCACAAGAAGGGAAAAGTATTCCTT
20110601C-002479 : GACGCTGGCTCTGCTTTGACCCCCCATTCTGTGGATTGGAGAGAGAAAGGCTATGTAACT
---------+---------+---------+---------+---------+---------+ 438
TCH01_0098_B06.b : GACGCTGGCTCTGCTTTGACCCCCCATTCTGTGGATTGGAGAGAGAAAGGCTATGTAACT
DCI01_0009_H08.b : GACGCTGGCTCTGCTTTGACCCCCCATTCTGTGGATTGGAGAGAGAAAGGCTATGTAACT
DCI01_0005_D12.b : GACGCTGGCTCTGCTTTGACCCCCCATTCTGTGGATTGGAGAGAGAAAGGCTATGTAACT
DCI01_0043_H03.b : GACGCTGGCTCTGCTTTGACCCCCCATTCTGTGGATTGGAGAGAGAAAGGCTATGTAACT
DCI01_0107_D07.b : GACGCTGGCTCTGCTCTGACCCCCCATTCTGTGGATTGGAGAGAGAAAGGCTATGTAACT
DCI01_0080_B03.b : GACGCTGGCTCTGCTTTGACCCCCCATTCTGTGGATTGGAGAGAGAAAGGCTATGTAACT
20110601C-002479 : GCTGTGAAGAATCAGGGTCACTGTGGTTCTTGTTGGGCTTTTAGTGCCACCGGCGCCCTC
---------+---------+---------+---------+---------+---------+ 498
TCH01_0098_B06.b : GCTGTGAAGAATCAGGGTCACTGTGGTTCTTGTTGGGCTTTTAGTGCCACCGGCGCCCTC
DCI01_0009_H08.b : GCTGTGAAGAATCAGGGTCACTGTGGTTCTTGTTGGGCTTTTAGTGCCACCGGCGCCCTC
DCI01_0005_D12.b : GCTGTGAAGAATCAGGGTCACTGTGGTTCTTGTTGGGCTTTTAGTGCCACCGGCGCCCTC
DCI01_0043_H03.b : GCTGTGAAGAATCAGGGTCACTGTGGTTCTTGTTGGGCTTTTAGTGCCACCGGCGCCCTC
DCI01_0107_D07.b : GCTGTGAAGAATCAGGGTCACTGTGGTTCTTGTTGGGCTTTTAGTGCCACCGGCGCCCTC
DCI01_0080_B03.b : GCTGTGAAGAATCAGGGTCACTGTGGTTCTTGTTGGGCTTTTAGTGCCACCGGCGCCCTC
20110601C-002479 : GAAGGACAGATGTTCCGGAAAACCAGCAAACTTATTTCACTGAGTGAGCAGAACCTGGTG
---------+---------+---------+---------+---------+---------+ 558
TCH01_0098_B06.b : GAAGGACAGATGTTCCGGAAAACCAGCAAACTTATTTCACTGAGTGAGCAGAACCTGGTG
DCI01_0009_H08.b : GAAGGACAGATGTTCCGGAAAACCAGCAAACTTATTTCACTGAGTGAGCAGAACCTGGTG
DCI01_0005_D12.b : GAAGGACAGATGTTCCGGAAAACCAGCAAACTTATTTCACTGAGTGAGCAGAACCTGGTG
DCI01_0043_H03.b : GAAGGACAGATGTTCCGGAAAACCAGCAAACTTATTTCACTGAGTGAGCAGAACCTGGTG
DCI01_0107_D07.b : GAAGGACAGATGTTCCGGAAAACCAGCAAACTTATTTCACTGAGTGAGCAGAACCTGGTG
DCI01_0080_B03.b : GAAGGACAGATGTTCCGGAAAACCAGCAAACTTATTTCACTGAGTGAGCAGAACCTGGTG
20110601C-002479 : GACTGCTCTTGGCCTGAGGGCAATGAGGGCTGCAATGGTGGCCTAATGGATAATGCCTTC
---------+---------+---------+---------+---------+---------+ 618
TCH01_0098_B06.b : GACTGCTCTTGGCCTGAGGGCAATGAGGGCTGCAATGGTGGCCTAATGGATAATGCCTTC
DCI01_0009_H08.b : GACTGCTCTTGGCCTGAGGGCAATGAGGGCTGCAATGGTGGCCTAATGGATTATGCCTTC
DCI01_0005_D12.b : GACTGCTCTTGGCCTGAGGGCAATGAGGGCTGCAATGGTGGCCTAATGGATAATGCCTTC
DCI01_0043_H03.b : GACTGCTCTTGGCCTGAGGGCAATGAGGGCTGCAATGGTGGCCTAATGGATAATGCCTTC
DCI01_0107_D07.b : GACTGCTCTTGGCCTGAGGGCAATGAGGGCTGCAATGGTGGCCTAATGGATAATGCCTTC
DCI01_0080_B03.b : GACTGCTCTTGGCCTGAGGGCAATGAGGGCTGCAATGGTGGCCTAATGGATAATGCCTTC
20110601C-002479 : CAGTACATTAAGGACAACGGAGGCCTGGACTCAGAGGAATCCTATCCATACTTTGGAAAG
---------+---------+---------+---------+---------+---------+ 678
TCH01_0098_B06.b : CAGTACATTAAGGACAACGGAGGCCTGGACTCAGAGGAATCCTATCCATACTTTGGAAAG
DCI01_0009_H08.b : CAGTACATTAAGGACAACGGAGGCCTGGACTCAGAGGAATCCTATCCATACTTTGGAAAG
DCI01_0005_D12.b : CAGTACATTAAGGACAACGGAGGCCTGGACTCAGAGGAATCCTATCCATACTTTGGAAAG
DCI01_0043_H03.b : CAGTACATTAAGGACAACGGAGGCCTGGACTCAGAGGAATCCTATCCATACTTTGGAAAG
DCI01_0107_D07.b : CAGTACATTAAGGACAACGGAGGCCTGGACTCAGAGGAATCCTATCCATACTTTGGAAAG
DCI01_0080_B03.b : CAGTACATTAAGGACAACGGAGGCCTGGACTCAGAGGAATCCTATCCATACTTTGGAAAG
20110601C-002479 : GATGGATCCTGCAAATACAAGCCCCAGAGTTCTGCTGCCAACGACACTGGTTACGTGGAT
---------+---------+---------+---------+---------+---------+ 738
TCH01_0098_B06.b : GATGGATCCTGCAAATACAAGCCCCAGAGTTCTGCTGCCAACGACACTGGTTACGTGGAT
DCI01_0009_H08.b : GATGGATCCTGCAAATTACAGCCCCAGAGTTCTGCTGCCAACGACACTGGTTACGTGGAT
DCI01_0005_D12.b : GATGGATCCTGCAAATACAAGCCCCAGAGTTCTGCTGCCAACGACACTGGTTACGTGGAT
DCI01_0043_H03.b : GATGGATCCTGCAAATACAAGCCCCAGAGTTCTGCTGCCAACGACACTGGTTACGTGAAT
DCI01_0107_D07.b : GATGGATCCTGCAAATACAAGCCCCAGAGTTCTGCTGCCCACGACACTGGTTACGTGGAT
DCI01_0080_B03.b : GATGGATCCTGCAAATACAAGCCCCAGAGTTCTGCTGCCAACGACACTGGTTACGTGGAT
20110601C-002479 : ATTCCAAAGCAGGAGAAAGCGCTTATGAAGGCCGTGGCAACTGTGGGGCCCATCTCTGTT
---------+---------+---------+---------+---------+---------+ 798
TCH01_0098_B06.b : ATTCCAAAGCAGGAGAAAGCGCTTATGAAGGCCGTGGCAACTGTGGGACCCATCTCTGTT
DCI01_0009_H08.b : ATTCCAAAGCAAGAGAAAGCGCTTATGAAGGCCGTGGCAACTGTGGGACCCATCTCTGTT
DCI01_0005_D12.b : ATTCCAAAGCAGGAGAAAGCGCTTATGAAGGCCGTGGCAACTGTGGGACCCATCTCTGTT
DCI01_0043_H03.b : ATTCC*AAGCAGGAGAAAGCGCTTATGAAGGCCGTGGCAACTGTGGGGCCCATCTCTGTT
DCI01_0107_D07.b : ATTCCAAAGCAGGAGAAAGCGCTTATGAAGGCCCGTGGCACTGTGGGGCCCATCTCTGTT
DCI01_0080_B03.b : ATTCCAAAGCAGGAGAAAGCGCTTATGAAGGCCGTGGCAACTGTGGGGCCCATCTCTGTT
20110601C-002479 : GGTATAGATGCAAGCCATGAATCCTTCCAGTTTTACAGCACAGGCATTTATTTTGAACCA
---------+---------+---------+---------+---------+---------+ 858
TCH01_0098_B06.b : GGTATAGATGCAAGCCATGAATCCTTCCAGTTTTACAGCACAGGCATTTATTTTGAAACA
DCI01_0009_H08.b : GGTATAGATGCAAGCCATGTATCCTTTCAGTTTTACAGCACCAGCTTTTATTTGGAACac
DCI01_0005_D12.b : GGTATAGATGCAAGCCATGAATCCTTCCAGTTTTACAGCACAGGCATTTATTTTGAACCA
DCI01_0043_H03.b : GGTATAGATGCAAGCCATGAATCCTT*CAGTTTTACAGCACAGGCATTTATTTGGAT*CA
DCI01_0107_D07.b : GGTATAGATGCCAGCCATGAATCCCTTCCGTTTTACAGCACAGGCATTTATTTTGAACCA
DCI01_0080_B03.b : GGTATAGATGCAAGCCATGAATCCTTCCAGTTTTACAGCACAGGCATTTATTTTGAACCA
20110601C-002479 : CAGTGCAGCAGCGAAGACCTGGATCATGGCGTTCTGGTGGTCGGCTATGGCGTTGAAGGA
---------+---------+---------+---------+---------+---------+ 918
TCH01_0098_B06.b : CAGTGCAGCAGCGAAGATCTGGATCATGGCGTTCTGGTGGTCGGCTATGGCGTtgaagga
DCI01_0009_H08.b : agtgcancaacaaaatctggatcatgcgtttcgggggtcggcctttgcgttgaaggacac
DCI01_0005_D12.b : CAGTGCAGCAGCGAAGATCTGGATCATGGCGTTCTGGTGGTCGGCTATGGCGTttgaaga
DCI01_0043_H03.b : CAGTGCAGCAGCGAAGACCTGGATCATGGCGTTCTGGTGGTCGGCTATGGCGTttaaagg
DCI01_0107_D07.b : CAGTGCAGCAGCGA*GAACTGGATCATGGCGTTCTGGTGGTCGGCTATGGgcgtgaagga
DCI01_0080_B03.b : CAGTGCAGCAGCGAAGACCTGGATCATGGCGTTCTGGTGGTCGGCTATGGCGTTGAAGGA
20110601C-002479 : GCACACTCAAATAATAAGTATTGGCTTGTNCAGAACAGCTGGGGTAATACTTGGGGCATG
---------+---------+---------+---------+---------+---------+ 978
TCH01_0098_B06.b : gcacactcaaataatagtattggctggtcagaacgctggggtatacttggggcatggatg
DCI01_0009_H08.b : ctcaaatattagttttggctgcaaaaacgctggggaatactgtgggcaggatgcttctta
DCI01_0005_D12.b : acaccctcaaataataattattggcttgtcaagaacagctgggggtatacttgggggcat
DCI01_0043_H03.b : accccctcaaataataagtatgggcttgtccagaacagctggggtaatacttgggggctg
DCI01_0107_D07.b : acccccctcaataataagtattggcttgtccagaacagctggggtaatacttgggggctg
DCI01_0080_B03.b : GCACACTCAAATAATAAGTATTGGCTTGTNCAGAACAGCTGGGGTAATACTTGGGGCATG
20110601C-002479 : GATGGCTACATAAAGATGACCAAAGATCAGAACACCACTGTGGAATCGCCCACATGGCCA
---------+---------+---------+---------+---------+---------+ 1038
TCH01_0098_B06.b : gcttctaagatgaccaagatcgaacaacactgtggaaccgccccatgcccagtacccggg
DCI01_0009_H08.b : agatgaccaagatccaactccctgtgcaatcccccctggcccgttcctggggtctaactc
DCI01_0005_D12.b : ggatggctccttaaaatggaccaaagatccgaaccacccccggtggaatccccaccatgg
DCI01_0043_H03.b : gatggcttcctaagatgaaccaagattcggaccacccctggggaatcccccctgggcccg
DCI01_0107_D07.b : aatgcctcctaaagatgaccaagatcagaccacccctgggaatcgccccctgccagttac
DCI01_0080_B03.b : GATGGCTACATAAAGATGACCAAAGATCAGAACACCACTGTGGAATCGCCCACATGGCCA
20110601C-002479 : GTTACCCTGTGGTCTAAATCTCNAAGACTGGATTAGAACAGAATAGCCCGAGGACAATTC
---------+---------+---------+---------+---------+---------+ 1098
TCH01_0098_B06.b : gtcaaatctcaagaatggaataggaccaattacccgaggacaaattttcttcaaccaaca
DCI01_0009_H08.b : caagagggattaaacaaaagccccggaatattttctccaacccccaacttttggtgggga
DCI01_0005_D12.b : gccattacccctggggtctaatccccaaaacgggaataaaaacgaaaatacccgaggaaa
DCI01_0043_H03.b : tacccggggggccaaatcccaaaaagggaataaaaacaaaataccccaggaatattctgt
DCI01_0107_D07.b : ctgggggccaaatcaaagaactgataagacaaaaaccccaggaaattcgtcttcaaccac
DCI01_0080_B03.b : GTTACCCTGTGGTCTAAATCTCNAAGACTGGATTAGAACAGAATAGCCCGAGGACAATTC
20110601C-002479 : TGTCTTCA....................................................
---------+---------+---------+---------+---------+---------+ 1106
TCH01_0098_B06.b : gaatctttggggggatcaaccttgaacttaagatcaattggattgaattcggcctttaac
DCI01_0009_H08.b : caaccttgaacattaggaccaattgttttgaatctgccctttaaggggaaattccctctt
DCI01_0005_D12.b : aattccgttcttcaaccc
DCI01_0043_H03.b : ttttaaacaaccaaatttttgtggggggatccacacttgaacccttggagaccaggtggg
DCI01_0107_D07.b : caaccctatggggggaccacccttgatcttgagatccagtgggatggaatcgggccttta
DCI01_0080_B03.b : TGTCTTCAaccnancagactctattgtgtgggatcaacactttgatcattgangatccnn
20110601C-002479 : ............................................................
---------+---------+---------+---------+---------+---------+ 1106
TCH01_0098_B06.b : tggggaagttccactttttatcgggggaaaaggtggggataaaggcccaaattgacttcc
DCI01_0009_H08.b : ttatagggaaaggtggggggacggctaatattgtcttgggtggagggtggtctcctttat
DCI01_0005_D12.b :
DCI01_0043_H03.b : tttgaattcgggccccttttaccgggggaaagttcccctttctttaatccggggaaaaag
DCI01_0107_D07.b : ccccgggaacttccccttcttattcggtggaaaaggtgggggatgagggccccaaattgc
DCI01_0080_B03.b : agtgtgattgaatctgtgccatttanctggtgaaatgtaccactcttnanntactgtgna
20110601C-002479 : ............................................................
---------+---------+---------+---------+---------+---------+ 1106
TCH01_0098_B06.b : gtttaaggggtaaagttccttaaaaaactttttggaaaaaaaaa
DCI01_0009_H08.b : aaagtttagaacaaaaaaaagaaagcctcg
DCI01_0005_D12.b :
DCI01_0043_H03.b : agttggagaggaggagtccaaaaatttgcctttccggtgtataaggagtaaaagtttttc
DCI01_0107_D07.b : cctccggtttaaagaggtaaatttccctttaaaaattttttgggttccaaaaaaaaaaaa
DCI01_0080_B03.b : aatagttggtgatgaggtgccaaaaattngactttcangttaaaaagagataagtttacc
20110601C-002479 : ............................................................
---------+---------+---------+---------+---------+---------+ 1106
TCH01_0098_B06.b :
DCI01_0009_H08.b :
DCI01_0005_D12.b :
DCI01_0043_H03.b : ctttaaaacctttttttggaaaaaannnannaactaaaanaanatgtacctcancaacaa
DCI01_0107_D07.b : aaaaaagggggccccgcctcaaattaacacttgggcgcgcccaaagaaggaaattctcaa
DCI01_0080_B03.b : ttttaaaaactaatttaggcaaaaaaaaaaaaaaaaaaaactgtcgcccccggcctcaaa
20110601C-002479 : ............................................................
---------+---------+---------+---------+---------+---------+ 1106
TCH01_0098_B06.b :
DCI01_0009_H08.b :
DCI01_0005_D12.b :
DCI01_0043_H03.b : aaataantaaatatttaggacacctacccttttctctcttctca
DCI01_0107_D07.b : acgccgaggggtctcaaacccgccccgcaaaagagtggtgtttagaggcccaaccccccc
DCI01_0080_B03.b : ttttaaccatcttggccgggccaagaaagaaagcaacgttccagaaccgccaaagggtgt
20110601C-002479 : ............................................................
---------+---------+---------+---------+---------+---------+ 1106
TCH01_0098_B06.b :
DCI01_0009_H08.b :
DCI01_0005_D12.b :
DCI01_0043_H03.b :
DCI01_0107_D07.b : cctttttttttaaaaaaaaaacnctctttgaaactccactccatatctctt
DCI01_0080_B03.b : tcccaaaaacgcgggcaggttaaacaagtttgggttgtttaaagacagccta