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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-004114

Length: 1,179

Sequence [FASTA format sequence]
TTGGGTCCTG CTGCTCGGAG GGGCCCCGGC TGCATCAGAG GCTGAGCTCT GCCAAGAGGG
AGGGCCCAAG AGAAGGTGGG TCTGAGCCTG AGGAAGCAAA CCACCCTGGG GCCCTCCCAC
CCCTGGTGCC AAAGCAGGAA GGAGGTGGGG CCTCCGCTGA GACGGCCTGG GAGGTCACTC
TCAGATAAGG GGCTCTTCCT ACACTGGAGC CCTGGGGGAG GAAATGGATC CTCAGCGCCT
GAGACAATGG CCAGGGCCGG GACCAGCCAG CCGAGGAGGC TACGGCCAGA GGCCCAGGAT
CAGGAACCCA GAGGAGTGGT TCCATGAGTT ATCTCCCCGA ACCTTCTCCT TCCACTTTCG
CAACCTGCGC TTTGCCTCTG GGCGGAACCG CTCCTACATC TGCTGCCAGG TGGAAGGAAA
GAACTGTTTC TTCCAAGGCA TCTTTCAAAA CCAGGTCCCT CCCGACCCGC CCTGCCACGC
CGAGCTCTGC TTCCTCTCTT GGTTCCAGTC CTGGGGGCTG TCCCCGGACG AGCATTACTA
CGTCACCTGG TTCATCTCCT GGAGCCCCTG CTGTGAGTGT GCAGCGAAGG TGGCTCAGTT
CCTGGAGGAG AACAGGAACG TGAGCCTGAG CCTCTCGGCC GCTCGCCTCT ACTACTTCTG
GAAGTCAGAG TCCCGGGAGG GGCTGCGCAG ACTGAGTGAC CTGGGGGCCC AGGTGGGCAT
CATGTCCTTC CAAGACTTCC AACACTGCTG GAACAACTTC GTGCACAACC TGGGGATGCC
CTTCCAGCCG TGGAAAAAAC TGCATAAAAA TTATCAACGC TTGGTCACAG AGCTGAAGCA
GATTCTCAGA AACACAATGA ATCTACTAAA AGAAAATATA TTCATACAAC AGTTTGGCAA
CCAGCCCCGG GTCTCGGCGC CCTACTATCT GAGGAAGACC TACTTGTGCT ACCAAGTGAA
GGGGCCCGAT GACTCCATTC TTGACAAAGG CTGCTTCCAA AACAAGAAAA AGCGACATGC
AGAAATTCGT TTTATTGACA AGATCAATTC CTTGAATCTA GACCAGAACC AGTGCTACAG
AATCATCTGC TATGTCACCT GGAGCCCTTG CCACAACTGT GCCAAGGAGC TGGGTGATTT
CATCAGCAAT CGGCACCCAC TGAGCCTGCA GCTCTTTGC


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinAPOBEC3Bprobable DNA dC->dU-editing enzyme APOBEC-3B [Homo sapiens]. 2264e-59O
Contig/Assembly ProteinAPOBEC3FDNA dC->dU-editing enzyme APOBEC-3F isoform a [Homo sapiens]. 2089e-54O
Contig/Assembly ProteinAPOBEC3GDNA dC->dU-editing enzyme APOBEC-3G [Homo sapiens]. 1924e-49O
Contig/Assembly ProteinAPOBEC3Dprobable DNA dC->dU-editing enzyme APOBEC-3D [Homo sapiens]. 1893e-48O
Contig/Assembly ProteinAPOBEC3Cprobable DNA dC->dU-editing enzyme APOBEC-3C [Homo sapiens]. 1772e-44O
Contig/Assembly ProteinAICDAactivation-induced cytidine deaminase [Homo sapiens]. 1441e-34O
Contig/Assembly ProteinAPOBEC3Aprobable DNA dC->dU-editing enzyme APOBEC-3A [Homo sapiens]. 1294e-30O
Contig/Assembly ProteinAPOBEC3Aprobable DNA dC->dU-editing enzyme APOBEC-3A [Homo sapiens]. 1294e-30O
Contig/Assembly ProteinAPOBEC3HDNA dC->dU-editing enzyme APOBEC-3H isoform 1 [Homo sapiens]. 1127e-25O
Contig/Assembly ProteinAPOBEC3HDNA dC->dU-editing enzyme APOBEC-3H isoform 4 [Homo sapiens]. 1127e-25O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinApobec3DNA dC->dU-editing enzyme APOBEC-3 isoform 2 [Mus musculus]. 2233e-58O
Contig/Assembly ProteinApobec3DNA dC->dU-editing enzyme APOBEC-3 isoform 1 [Mus musculus]. 2102e-54O
Contig/Assembly ProteinAicdaactivation-induced cytidine deaminase [Mus musculus]. 1501e-36O
Contig/Assembly ProteinApobec2probable C->U-editing enzyme APOBEC-2 [Mus musculus]. 1002e-21O
Contig/Assembly ProteinApobec1C->U-editing enzyme APOBEC-1 isoform 1 [Mus musculus]. 80.52e-15O
Contig/Assembly ProteinApobec1C->U-editing enzyme APOBEC-1 isoform 2 [Mus musculus]. 80.52e-15O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinAICDAactivation-induced cytidine deaminase [Canis lupus familiaris]. 1463e-35O
Contig/Assembly ProteinLOC481248PREDICTED: similar to ARP10 protein [Canis familiaris]. 1197e-27O
Contig/Assembly ProteinLOC610245PREDICTED: similar to Probable DNA dC->dU editing enzyme APOBEC-3A (Phorbolin 1) [Canis familiaris]. 1181e-26O
Contig/Assembly ProteinLOC610077PREDICTED: similar to apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G [Canis familiaris]. 1058e-23O
Contig/Assembly ProteinLOC481788PREDICTED: similar to Probable C->U editing enzyme APOBEC-2 [Canis familiaris]. 1012e-21O
Contig/Assembly ProteinLOC486699PREDICTED: similar to Apolipoprotein B mRNA editing enzyme (APOBEC-1) (HEPR) [Canis familiaris]. 80.53e-15O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinAPOBEC3Bapolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B [Bos taurus]. 366e-101O
Contig/Assembly ProteinAICDAactivation-induced cytidine deaminase [Bos taurus]. 1411e-33O
Contig/Assembly ProteinAPOBEC3Aprobable DNA dC->dU-editing enzyme APOBEC-3A [Bos taurus]. 1395e-33O
Contig/Assembly ProteinAPOBEC2probable C->U-editing enzyme APOBEC-2 [Bos taurus]. 1003e-21O
Contig/Assembly ProteinAPOBEC1PREDICTED: apolipoprotein B mRNA editing protein-like [Bos taurus]. 74.71e-13O
Contig/Assembly ProteinAPOBEC1PREDICTED: apolipoprotein B mRNA editing protein-like [Bos taurus]. 74.71e-13O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinAPOBEC3FDNA dC->dU-editing enzyme APOBEC-3F [Sus scrofa]. 6840.0O
Contig/Assembly ProteinLOC100526050PREDICTED: activation-induced cytidine deaminase-like [Sus scrofa]. 1462e-35O
Contig/Assembly ProteinLOC100156477PREDICTED: probable C->U-editing enzyme APOBEC-2-like isoform 1 [Sus scrofa]. 1019e-22O
Contig/Assembly ProteinLOC100518202PREDICTED: probable C->U-editing enzyme APOBEC-2-like isoform 1 [Sus scrofa]. 1019e-22O
Contig/Assembly ProteinLOC100512412PREDICTED: c->U-editing enzyme APOBEC-1-like [Sus scrofa]. 80.52e-15O
Contig/Assembly ProteinLOC100517662PREDICTED: probable C->U-editing enzyme APOBEC-2-like [Sus scrofa]. 60.81e-09O


Assembly Members: 7      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
CLNT10123H08CLNT1_0123_H08.bHX220963 
ITT010088A01ITT01_0088_A01.bBW983773 
MLN010048C04MLN01_0048_C04.bCJ011343 
OVR010052D07OVR01_0052_D07.bBW964248 
OVRT10087E05OVRT1_0087_E05.bFS693501 
SPL010027G12SPL01_0027_G12.bBP159030 AK350289
UTR010048B07UTR01_0048_B07.bBP170197 AK240267

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
885A300.500WNAAA/K
T300.500ATA/I


Alignment:      TOP

20110601C-004114 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
UTR01_0048_B07.b : catttgggtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLN01_0048_C04.b :
SPL01_0027_G12.b :
OVRT1_0087_E05.b :
ITT01_0088_A01.b :
CLNT1_0123_H08.b :
OVR01_0052_D07.b :
20110601C-004114 : ........................TTGGGTCCTGCTGCTCGGAGGGGCCCCGGCTGCATC
---------+---------+---------+---------+---------+---------+ 36
UTR01_0048_B07.b : xxxxxxxxxxxxxxxxxxxxxxxxTTGGGTCCTGCTGCTCGGAGGGGCCCCGGCTGCATC
MLN01_0048_C04.b :
SPL01_0027_G12.b :
OVRT1_0087_E05.b :
ITT01_0088_A01.b :
CLNT1_0123_H08.b :
OVR01_0052_D07.b :
20110601C-004114 : AGAGGCTGAGCTCTGCCAAGAGGGAGGGCCCAAGAGAAGGTGGGTCTGAGCCTGAGGAAG
---------+---------+---------+---------+---------+---------+ 96
UTR01_0048_B07.b : AGAGGCTGAGCTCTGCCAAGAGGGAGGGCCCAAGAGAAGGTGGGTCTGAGCCTGAGGAAG
MLN01_0048_C04.b : nnnngggctgtactatnacxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SPL01_0027_G12.b : cxxxxxxxxxxxxxxxxxxxxxx
OVRT1_0087_E05.b :
ITT01_0088_A01.b :
CLNT1_0123_H08.b :
OVR01_0052_D07.b :
20110601C-004114 : CAAACCACCCTGGGGCCCTCCCACCCCTGGTGCCAAAGCAGGAAGGAGGTGGGGCCTCCG
---------+---------+---------+---------+---------+---------+ 156
UTR01_0048_B07.b : CAAACCACCCTGGGGCCCTCCCACCCCTGGTGCCAAAGCAGGAAGGAGGTGGGGCCTCCG
MLN01_0048_C04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGCAGGAAGGAGGTGGGGCCTCCG
SPL01_0027_G12.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVRT1_0087_E05.b : nnnggcttttnnnnnnnncctatagcgcacgagtgxxxxxxxxxxxxx
ITT01_0088_A01.b : tttagtgaaacxx
CLNT1_0123_H08.b : n
OVR01_0052_D07.b : nnnnggcttggactatgacagtttg
20110601C-004114 : CTGAGACGGCCTGGGAGGTCACTCTCAGATAAGGGGCTCTTCCTACACTGGAGCCCTGGG
---------+---------+---------+---------+---------+---------+ 216
UTR01_0048_B07.b : CTGAGACGGCCTGGGAGGTCACTCTCAGATAAGGGGCTCTTCCTACACTGGAGCCCTGGG
MLN01_0048_C04.b : CTGAGACGGCCTGGGAGGTCACTCTCAGATAAGGGGCTCTTCCTACACTGGAGCCCTGGG
SPL01_0027_G12.b : xxGAGACGGCCTGGGAGGTCACTCTCAGATAAGGGGCTCTTCCTACACTGGAGCCCTGGG
OVRT1_0087_E05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTCTTCCTACACTGGAGCCCTGGG
ITT01_0088_A01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCTACACTGGAGCCCTGGG
CLNT1_0123_H08.b : nnnnactatagcgnacgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
OVR01_0052_D07.b : tacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxttttcc
20110601C-004114 : GGAGGAAATGGATCCTCAGCGCCTGAGACAATGGCCAGGGCCGGGACCAGCCAGCCGAGG
---------+---------+---------+---------+---------+---------+ 276
UTR01_0048_B07.b : GGAGGAAATGGATCCTCAGCGCCTGAGACAATGGCCAGGGCCGGGACCAGCCAGCCGAGG
MLN01_0048_C04.b : GGTGGAAATGGATCCTCAGCGCCTGAGACAATGGCCAGGGCCGGGACCAGCCAGCCGAGG
SPL01_0027_G12.b : GGAGGAAATGGATCCTCAGCGCCTGAGACAATGGCCAGGGCCGGGACCAGCCAGCCGAGG
OVRT1_0087_E05.b : GGAGGAAATGGATCCTCAGCGCCTGAGACAATGGCCAGGGCCGGGACCAGCCAGCCGAGG
ITT01_0088_A01.b : GGAGGAAATGGATCCTCAGCGCCTGAGACAATGGCCAGGGCCGGGACCAGCCAGCCGAGG
CLNT1_0123_H08.b : xxxxxxxxxxxxttgggtcctgctgctcggaggggccccggctgcatcagaggctgagct
OVR01_0052_D07.b : ctttgtgtaacattgggtcctgctgctcggaggggccccggctgcatcagaggctgagct
20110601C-004114 : AGGCTACGGCCAGAGGCCCAGGATCAGGAACCCAGAGGAGTGGTTCCATGAGTTATCTCC
---------+---------+---------+---------+---------+---------+ 336
UTR01_0048_B07.b : AGGCTACGGCCAGAGGCCCAGGATCAGGAACCCAGAGGAGTGGTTCCATGAGTTATCTCC
MLN01_0048_C04.b : AGGCTACGGCCAGAGGCCCAGGATCAGGAACCCAGAGGAGTGGTTCCATGAGTTATCTCC
SPL01_0027_G12.b : AGGCTACGGCCAGAGGCCCAGGATCAGGAACCCAGAGGAGTAGTTCCATGAGTTATCTCC
OVRT1_0087_E05.b : AGGCTACGGCCAGAGGCCCAGGATCAGGAACCCAGAGGAGTGGTTCCATGAGTTATCTCC
ITT01_0088_A01.b : AGGCTACGGCCAGAGGCCCAGGATCAGGAACCCAGAGGAGTGGTTCCATGAGTTATCTCC
CLNT1_0123_H08.b : ctgccaagagggagggcccaagagaAGGAACCCAGAGGAGTGGTTCCATGAGTTATCTCC
OVR01_0052_D07.b : ctgccaagagggagggcccaagagaAGGAACCCAGAGGAGTGGTTCCATGAGTTATCTCC
20110601C-004114 : CCGAACCTTCTCCTTCCACTTTCGCAACCTGCGCTTTGCCTCTGGGCGGAACCGCTCCTA
---------+---------+---------+---------+---------+---------+ 396
UTR01_0048_B07.b : CCGAACCTTCTCCTTCCACTTTCGCAACCTGCGCTTTGCCTCTGGGCGGAACCGCTCCTA
MLN01_0048_C04.b : CCGAACCTTCTCCTTCCACTTTCGCAACCTGCGCTTTGCCTCTGGGCGGAACCGCTCCTA
SPL01_0027_G12.b : CCGAACCTTCTCCTTCCACTTTCGCAACCTGCGCTTTGCCTCTGGGCGGAACCGCTCCTA
OVRT1_0087_E05.b : CCGAACCTTCTCCTTCCACTTTCGCAACCTGCGCTTTGCCTCTGGGCGGAACCGCTCCTA
ITT01_0088_A01.b : CCGAACCTTCTCCTTCCACTTTCGCAACCTGCGCTTTGCCTCTGGGCGGAACCGCTCCTA
CLNT1_0123_H08.b : CCGAACCTTCTCCTTCCACTTTCGCAACCTGCGCTTTGCCTCTGGGCGGAACCGCTCCTA
OVR01_0052_D07.b : CCGAACCTTCTCCTTCCACTTTCGCAACCTGCGCTTTGCCTCTGGGCGGAACCGCTCCTA
20110601C-004114 : CATCTGCTGCCAGGTGGAAGGAAAGAACTGTTTCTTCCAAGGCATCTTTCAAAACCAGGT
---------+---------+---------+---------+---------+---------+ 456
UTR01_0048_B07.b : CATCTGCTGCCAGGTGGAAGGAAAGAACTGTTTCTTCCAAGGCATCTTTCAAAACCAGGT
MLN01_0048_C04.b : CATCTGCTGCCAGGTGGAAGGAAAGAACTGTTTCTTCCAAGGCATCTTTCAAAACCAGGT
SPL01_0027_G12.b : CATCTGCTGCCAGGTGGAAGGAAAGAACTGTTTCTTCCAAGGCATCTTTCAAAACCAGGT
OVRT1_0087_E05.b : CATCTGCTGCCAGGTGGAAGGAAAGAACTGTTTCTTCCAAGGCATCTTTCAAAACCAGGT
ITT01_0088_A01.b : CATCTGCTGCCAGGTGGAAGGAAAGAACTGTTTCTTCCAAGGCATCTTTCAAAACCAGGT
CLNT1_0123_H08.b : CATCTGCTGCCAGGTGGAAGGAAAGAACTGTTTCTTCCAAGGCATCTTTCAAAACCAGGT
OVR01_0052_D07.b : CATCTGCTGCCAGGTGGAAGGAAAGAACTGTTTCTTCCAAGGCATCTTTCAAAACCAGGT
20110601C-004114 : CCCTCCCGACCCGCCCTGCCACGCCGAGCTCTGCTTCCTCTCTTGGTTCCAGTCCTGGGG
---------+---------+---------+---------+---------+---------+ 516
UTR01_0048_B07.b : CCCTCCCGACCCGCCCTGCCACGCCGAGCTCTGCTTCCTCTCTTGGTTCCAGTCCTGGGG
MLN01_0048_C04.b : CCCTCCCGACCCGCCCTGCCACGCCGAGCTCTGCTTCCTCTCTTGGTTCCAGTCCTGGGG
SPL01_0027_G12.b : CCCTCCCGACCCGCCCTGCCACGCCGAGCTCTGCTTCCTCTCTTGGTTCCAGTCCTGGGG
OVRT1_0087_E05.b : CCCTCCCGACCCGCCCTGCCACGCCGAGCTCTGCTTCCTCTCTTGGTTCCAGTCCTGGGG
ITT01_0088_A01.b : CCCTCCCGACCCGCCCTGCCACGCCGAGCTCTGCTTCCTCTCTTGGTTCCAGTCCTGGGG
CLNT1_0123_H08.b : CCCTCCCGACCCGCCCTGCCACGCCGAGCTCTGCTTCCTCTCTTGGTTCCAGTCCTGGGG
OVR01_0052_D07.b : CCCTCCCGACCCGCCCTGCCACGCCGAGCTCTGCTTCCTCTCTTGGTTCCAGTCCTGGGG
20110601C-004114 : GCTGTCCCCGGACGAGCATTACTACGTCACCTGGTTCATCTCCTGGAGCCCCTGCTGTGA
---------+---------+---------+---------+---------+---------+ 576
UTR01_0048_B07.b : GCTGTCCCCGGACGAGCATTACTACGTCACCTGGTTCATCTCCTGGAGCCCCTGCTGTGA
MLN01_0048_C04.b : GCTGTCCTCGGACGAGCATTACTACGTCACCTGGTTCATCTCCTGGAGCCCCTGCTGTGA
SPL01_0027_G12.b : GCTGTCCCCGGACGAGCATTACTACGTCACCTGGTTCATCTCCTGGAGCCCCTGCTGTGA
OVRT1_0087_E05.b : GCCGTCCCCGGACGAGCATTACTACGTCACCTGGTTCATCTCCTGGAGCCCCTGCTGTGA
ITT01_0088_A01.b : GCTGTCCCCGGACGAGCATTACTACGTCACCTGGTTCATCTCCTGGAGCCCCTGCTGTGA
CLNT1_0123_H08.b : GCTGTCCCCGGACGAGCATTACTACGTCACCTGGTTCATCTCCTGGAGCCCCTGCTGTGA
OVR01_0052_D07.b : GCTGTCCCCGGACGAGCATTACTACGTCACCTGGTTCATCTCCTGGAGCCCCTGCTGTGA
20110601C-004114 : GTGTGCAGCGAAGGTGGCTCAGTTCCTGGAGGAGAACAGGAACGTGAGCCTGAGCCTCTC
---------+---------+---------+---------+---------+---------+ 636
UTR01_0048_B07.b : GTGTGCAGCGAAGGTGGCTCAGTTCCTGGAGGAGAACAGGAACGTGAGCCTGAGCCTCTC
MLN01_0048_C04.b : GTGTGCAGCGAAGGTGGCTCAGTTCCTGGAGGAGAACAGGAACGTGAGCCTGAGCCTCTC
SPL01_0027_G12.b : GTGTGCAGCGAAGGTGGCTCAGTTCCTGGAGGAGAACAGGAACGTGAGCCTGAGCCTCTC
OVRT1_0087_E05.b : GTGTGCAGCGAAGGTGGCTCAGTTCCTGGAGGAGAACAGGAACGTGAGCCTGAGCCTCTC
ITT01_0088_A01.b : GTGTGCAGCGAAGGTGGCTCAGTTCCTGGAGGAGAACAGGAACGTGAGCCTGAGCCTCTC
CLNT1_0123_H08.b : GTGTGCAGCGAAGGTGGCTCAGTTCCTGGAGGAGAACAGGAACGTGAGCCTGAGCCTCTC
OVR01_0052_D07.b : GTGTGCAGCGAAGGTGGCTCAGTTCCTGGAGGAGAACAGGAACGTGAGCCTGAGCCTCTC
20110601C-004114 : GGCCGCTCGCCTCTACTACTTCTGGAAGTCAGAGTCCCGGGAGGGGCTGCGCAGACTGAG
---------+---------+---------+---------+---------+---------+ 696
UTR01_0048_B07.b : GGCCGCTCGCCTCTACTACTTCTGGAAGTCAGAGCCCCGGGAGGGGCTGCGCAGACTGAG
MLN01_0048_C04.b : GGCCGCTCGCCTCTACTACTTCTGGAAGTCAGAGTCCCGGGAGGGGCTGCGCAGACTGAG
SPL01_0027_G12.b : GGCCGCTCGCCTCTACTACTTCTGGAAGTCAGAGTCCCGGGAGGGGCTGCGCAGACTGAG
OVRT1_0087_E05.b : GGCCGCTCGCCTCTACTACTTCTGGAAGTCAGAGTCCCGGGAGGGGCTGCGCAGACTGAG
ITT01_0088_A01.b : GGCCGCTCGCCTCTACTACTTCTGGAAGTCAGAGTCCCGGGAGGGGCTGCGCAGACTGAG
CLNT1_0123_H08.b : GGCCGCTCGCCTCTACTACTTCTGGAAGTCAGAGTCCCGGGAGGGGCTGCGCAGACTGAG
OVR01_0052_D07.b : GGCCGCTCGCCTCTACTACTTCTGGAAGTCAGAGTCCCGGGAGGGGCTGCGCAGACTGAG
20110601C-004114 : TGACCTGGGGGCCCAGGTGGGCATCATGTCCTTCCAAGACTTCCAACACTGCTGGAACAA
---------+---------+---------+---------+---------+---------+ 756
UTR01_0048_B07.b : TGACCTGNGGGCCCAGGTGGGCATCATGTCCTTCCAAGACTTCCAACACTGCTGGAACAA
MLN01_0048_C04.b : TGACCTGGGGGCCCAGGTGGGCATCATGTCCTTCCAAGACTTCCAACACTGCTGGAACAA
SPL01_0027_G12.b : TGACCTGGGGGCCCAGGTGGGCATCATGTCCTTCCAAGACTTCCAACACTGCTGGAACAA
OVRT1_0087_E05.b : TGACCTGGGGGCCCAGGTGGGCATCATGTCCTTCCAAGACTTCCAACACTGCTGGAACAA
ITT01_0088_A01.b : TGACCTGGGGGCCCAGGTGGGCATCATGTCCTTCCAAGACTTCCAACACTGCTGGAACAA
CLNT1_0123_H08.b : TGACCTGGGGGCCCAGGTGGGCATCATGTCCTTCCAAGACTTCCAACACTGCTGGAACAA
OVR01_0052_D07.b : TGACCTGGGGGCCCAGGTGGGCATCATGTCCTTCCAAGACTTCCAACACTGCTGGAACAA
20110601C-004114 : CTTCGTGCACAACCTGGGGATGCCCTTCCAGCCGTGGAAAAAACTGCATAAAAATTATCA
---------+---------+---------+---------+---------+---------+ 816
UTR01_0048_B07.b : CTTCGTGCACAACCTGNGGATGCCCTTCCAGCCGTGGAAAAAACTGCATAAAAATTATCA
MLN01_0048_C04.b : CTTCGTGCACAACCTGNGGATGCCCTTCCAGCCGTGGAAAAAACTGCATAAAAATTATCA
SPL01_0027_G12.b : CTTCGTGCACAACCTGGGGATGCCCTTCCAGCCGTGGAAAAAACTGCATAAAAATTATCA
OVRT1_0087_E05.b : CTTCGTGCACAACCTGGGGATGCCCTTCCAGCCGTGGAAAAAACTGCATAAAAATTATCA
ITT01_0088_A01.b : CTTCGTGCACAACCTGGGGATGCCCTTCCAGCCGTGGAAAAAACTGCATAAAAATTATCA
CLNT1_0123_H08.b : CTTCGTGCACAACCTGGGGATGCCCTTCCAGCCGTGGAAAAAACTGCATAAAAATTATCA
OVR01_0052_D07.b : CTTCGTGCACAACCTGGGGATGCCCTTCCAGCCGTGGAAAAAACTGCATAAAAATTATCA
20110601C-004114 : ACGCTTGGTCACAGAGCTGAAGCAGATTCTCAGAAACACAATGAATCTACTAAAAGAAAA
---------+---------+---------+---------+---------+---------+ 876
UTR01_0048_B07.b : ACGCTTGGTCACAGAGCTGAAGCAGATTCTCAGAAACACAATGAATCTACTAAAAAAAAA
MLN01_0048_C04.b : ACGCTTGGTCACAGAGCTGAAGCAGATTCTCAGAAACACAATGAATCTACTAAAAGAAAA
SPL01_0027_G12.b : ACGCTTGGTCACAGAGCTGAAGCAGATTCTCAGAAACACAATGAATCTACTAAAAGAAAA
OVRT1_0087_E05.b : ACGCTTGGTCACAGAGCTGAAGCAGATTCTCAGAAACACAATGAATCTACTAAAAGAAAA
ITT01_0088_A01.b : ACGCTTGGTCACAGAGCTGAAGCAGATTCTCAGAAACACAATGAATCTACTAAAAGAAAA
CLNT1_0123_H08.b : ACGCTTGGTCACAGAGCTGAAGCAGATTCTCAGAAACACAATGAATCTACTAAAAGAAAA
OVR01_0052_D07.b : ACGCTTGGTCACAGAGCTGAAGCAGATTCTCAGAAACACAATGAATCTACTAAAAGAAAA
20110601C-004114 : TATATTCATACAACAGTTTGGCAACCAGCCCCGGG*TCTCGGCGCCCTACTATCTGAGGA
---------+---------+---------+---------+---------+---------+ 935
UTR01_0048_B07.b : TATATTCATACAACAGTTTGGCAACCAGCCCCGGGGTCTTGGCGCCCTACTATCTGAGGA
MLN01_0048_C04.b : TATATTCATACAACAGTTTGGCAACCAGCCCCGGG*TCTTGGCGCCCTACTATCTGAGGA
SPL01_0027_G12.b : TATATTCAAACAACAGTTTGGCAACCAGCCCCGGG*TCTCGGCGCCCTACTATCTGAG
OVRT1_0087_E05.b : TATATTCAAACAACAGTTTGGCAACCAGCCCCGGG*TCTCGGCGCCCTACTATCTGAGGA
ITT01_0088_A01.b : TATATTCATACAACAGTTTGGCAACCAGCCCCGGG*TCTTGGCGCCCTACTATCTGAGGA
CLNT1_0123_H08.b : TATATTCAAACAACAGTTTGGCAACCAGCCCCGGG*TCTCGGCGCCCTACTATCTGAGGA
OVR01_0052_D07.b : TATATTCATACAACAGTTTGGCAACCAGCCCCGGG*TCTTGGCGCCCTACTATCTGGGGA
20110601C-004114 : AGACCTACTTGTGCTACCAAGTGAAGGGG*CCCGATGACTCCATTCTTGACAAAGGCTGC
---------+---------+---------+---------+---------+---------+ 994
UTR01_0048_B07.b : AGACCTACTTGTGCTACCAAGTtgaaggggccccaatgaatccctttctttacaaaaggc
MLN01_0048_C04.b : AGACCTACTTGTGCTACCAAGTGAAGGGG*CCCGATGACTCCATTCTTGACAAAGGCTGC
SPL01_0027_G12.b :
OVRT1_0087_E05.b : AGACCTACTTGTGCTACCAAGTGAAGGGG*CCCGATGACTCCATTCTTGACAAAGGCTGC
ITT01_0088_A01.b : AGACCTACTTGTGCTACCAAGTGAAGGGGCCCCGATGACTCCATTCTTGACAAAGGCTGC
CLNT1_0123_H08.b : AGACCTACTTGTGCTACCAAGTGAAGGGG*CCCGATGACTCCATTTCTGACAAAGGCTGC
OVR01_0052_D07.b : AGACCTACTTGTGCTACCAAGTGAAGGGG*CCCGATGACTCCATTCTTGACAAAGGCTGC
20110601C-004114 : TTCCAAAACAAGAAAAAGCGACATGCAGAAA*TTCGTTTTATTGACAAGATCAATTCCTT
---------+---------+---------+---------+---------+---------+ 1053
UTR01_0048_B07.b : tgctttccaaaacaagaaaaaagccaacatgcaaaaaatttctttttttttttacca
MLN01_0048_C04.b : TTCC*AAACAAGAAAAAGCGACATGCAGAAA*ATCGTTTTtatgacaagatcaattcctt
SPL01_0027_G12.b :
OVRT1_0087_E05.b : TTCCCAAAACAGAAAAAGCGACATGCAGAAA*TTCGTTTTTATGACAAGATCAATTCCCT
ITT01_0088_A01.b : TTCCAAAACAAGAAAAAGCGACATGCAGAAA*TTCGTTTTATTGANCAAGATCATTCCTT
CLNT1_0123_H08.b : TTCCAAAACAAGAAAAAGCGACATGCAGAAA*TTCGTTTTATTTGACAGATCAATTCCNN
OVR01_0052_D07.b : TTCCAAAACAAGAAAAAGCGACATGCAGAAATTTCGTTTTATTGACAAGATCAATTCCTT
20110601C-004114 : GAATCTAGACCAGAACCAGTGCTACAGAATCATCTGCTATGTCACCTGGAGCCCTTGCCA
---------+---------+---------+---------+---------+---------+ 1113
UTR01_0048_B07.b :
MLN01_0048_C04.b : gatctggaccagaacagtgctacagatcctctgctatgtcactgaagccttgccacactg
SPL01_0027_G12.b :
OVRT1_0087_E05.b : GAATCTGGACCAGAAACAGTGCTACAGAATCATCTGCTATGTcacctggagccttgtcac
ITT01_0088_A01.b : GNATCTAGACCAGAACCAGTGCTACAGAATCATCTGCTATGTCACCTGGAGCCCTTGCCA
CLNT1_0123_H08.b : TGATCTGGACCAGAACCAGTGCTACAGAATCATCTGCTATGTCACCTGGAGCCCTgtcaa
OVR01_0052_D07.b : GAATCTGGACCAGAACCAGTGCTACAGAATCATCTGCTATGTcccctggaagcccttgcc
20110601C-004114 : CAACTGTGCCAAGGAGCTGGGTGATTTCATCAGCAATCGGCACCCACTGAGCCTGCAGCT
---------+---------+---------+---------+---------+---------+ 1173
UTR01_0048_B07.b :
MLN01_0048_C04.b : tgccaagaactggttgatttatcaccatcggcaccactgaccctgagttctttgctcccg
SPL01_0027_G12.b :
OVRT1_0087_E05.b : actgtgcaaggagctgggtgatttctcagcatccgcaccactgagctgcactctttgcct
ITT01_0088_A01.b : CAACTGTGCCAAGGAGCTGGGTGATTTCATCAGCAATCGGCACCCACTGAGCCTGCAGCT
CLNT1_0123_H08.b : cactgtgccaaggagcttttngaattcatcanncatcngcaccacctgagctgcagctct
OVR01_0052_D07.b : acaactgtgcccaggaactggttgatttcatcagcaatcggccccacctgagcctgcagc
20110601C-004114 : CTTTGC......................................................
---------+---------+---------+---------+---------+---------+ 1179
UTR01_0048_B07.b :
MLN01_0048_C04.b : ctgtacttcacgggtcaggtgttacaaagggtctgcacctctgcagcaaacggttcccct
SPL01_0027_G12.b :
OVRT1_0087_E05.b : cggctgtactccctggtcagggtaatcaagggtcggcacctcgcaggaatcggtttcgtg
ITT01_0088_A01.b : CTTTGCctcccgnctgtacttncactgggtcagggtgtatcaaaggggtctgcagcgtct
CLNT1_0123_H08.b : ttgcctccggctgtacttcactgggtcagtggtaacaaaggggtctgcacgttcggcggc
OVR01_0052_D07.b : tccttgccctccgcctgtacttcccccggggtcagggggttatcaaaggggtctgccccg
20110601C-004114 : ............................................................
---------+---------+---------+---------+---------+---------+ 1179
UTR01_0048_B07.b :
MLN01_0048_C04.b : ggctttttaaagccccaattcaaaacgctggaaaattttgggacccggggggaaattctt
SPL01_0027_G12.b :
OVRT1_0087_E05.b : ctgtctgaaggccaaattcaaacggtggaaagtggggacccagggaaactcctccgggaa
ITT01_0088_A01.b : gcaggcaaagcggttctccttggctgtcatgnaagccccaaattccaagactgctgggga
CLNT1_0123_H08.b : aatcgggtttcgtggctgtctgaaagcccaaattcaagacggctgggaaattggtgaccc
OVR01_0052_D07.b : cctgcagggcaaaccgggtctcccttgcttgtcttgaaaaggcccaaaattt
20110601C-004114 : ............................................................
---------+---------+---------+---------+---------+---------+ 1179
UTR01_0048_B07.b :
MLN01_0048_C04.b : tctggaaaacgggaatcaccaaaaatacccagctctgggtccggttctcaacaaaaatag
SPL01_0027_G12.b :
OVRT1_0087_E05.b : gctggcaataacgaactaccgacgtcaagatcggtttccaaacaatttgagatctcaaaa
ITT01_0088_A01.b : aattgtgggaccccaggggnagagcttccatccctngaaaacctggacaatcagcagagc
CLNT1_0123_H08.b : ccaggggaaaattcccttctggaaaactggaaaataagcaagcaaaaccgagggctcagg
OVR01_0052_D07.b :
20110601C-004114 : ............................................................
---------+---------+---------+---------+---------+---------+ 1179
UTR01_0048_B07.b :
MLN01_0048_C04.b : aatcttaatttcacggtcccccctcccaaaaaccaaaaaaagtgggttt
SPL01_0027_G12.b :
OVRT1_0087_E05.b : ttccccgtccccccccctcaaaagcccagaaaattcgggttccctatctgaaaaaaaccg
ITT01_0088_A01.b : ttaaccaagggtctcaggatctggtttccgaatccaaaatttaaagatcctccaaaattg
CLNT1_0123_H08.b : gattcggtttcgaaaaaaattttgagatcctcagaattggccggtcccccccttctccca
OVR01_0052_D07.b :
20110601C-004114 : ............................................................
---------+---------+---------+---------+---------+---------+ 1179
UTR01_0048_B07.b :
MLN01_0048_C04.b :
SPL01_0027_G12.b :
OVRT1_0087_E05.b : ggccttctccaaggagttttcctctttttgtgaattttaaaaaacgccttccttttgggg
ITT01_0088_A01.b : gagcggttcccccccctttctaaaaaggctccaggaacaaactccggggattccccccat
CLNT1_0123_H08.b : aaaaccgaagaaaattcggggtccccccccttggaaaaaaaaccccgggcttccctccag
OVR01_0052_D07.b :
20110601C-004114 : ............................................................
---------+---------+---------+---------+---------+---------+ 1179
UTR01_0048_B07.b :
MLN01_0048_C04.b :
SPL01_0027_G12.b :
OVRT1_0087_E05.b : gtctaaaaaaaaaagggggcggaacccccttggggtttttg
ITT01_0088_A01.b : cttgaaccaaaaattccgggggccttcctctcaaagggaattctctcttttttgtcttct
CLNT1_0123_H08.b : gggatttctccttttcttgggagatttaaaaaaaaaccggacttttttgtgggggggtat
OVR01_0052_D07.b :
20110601C-004114 : ............................................................
---------+---------+---------+---------+---------+---------+ 1179
UTR01_0048_B07.b :
MLN01_0048_C04.b :
SPL01_0027_G12.b :
OVRT1_0087_E05.b :
ITT01_0088_A01.b : gggggatttttataaaaaatgcgcggcgatcctt
CLNT1_0123_H08.b : aaaaagggggggggggaannnnanaacgccgccttgaggaaaannaaannagaatacgcc
OVR01_0052_D07.b :
20110601C-004114 : ............................................................
---------+---------+---------+---------+---------+---------+ 1179
UTR01_0048_B07.b :
MLN01_0048_C04.b :
SPL01_0027_G12.b :
OVRT1_0087_E05.b :
ITT01_0088_A01.b :
CLNT1_0123_H08.b : gtctccgcccagccccgcgcnnnnnnnnnnnnnnnnnnnnnnt
OVR01_0052_D07.b :