[Help]

[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-004213

Length: 960

Sequence [FASTA format sequence]
TTCCCGGTGC AGCTCCCAGA CTCACCCCTC ACCCTGCACC TCAAAGGAGC CTGGCTGGGT
GCAGCCTGGA TTCCCGGTGG CCCGTCCATC TGTCCCTAGT CCCCTGTCCG GCAGCCCTTG
GCCCGGGATC TCACGCCCGC GTGTGTGGGA GGCCTCCCTC CCCCCGCCTC TGGCCCTAAG
AGACTTTGCC CGCCTCCCCG ACCGGGAAAG TCAACAGACG GCGTGCCCCG CGGGCCTCGC
CATGGCCTCC CTGCGGCCGG CCCTTCTCTG CCTCCTCCTC TGCCTGCAGG GGTCCCTGGC
GGCAGTTTTT GTTGCCCAGG AACAAGCCCA CAGCCTCCTG CACAGGTTCC GGCGCGCCAA
CTCATTCCTG GAGGAGCTGT GGCCCGGCTC GCTGGAGAGG GAGTGCAGGG AGGAGCAGTG
CTCCTTCGAG GAGGCCCGGG AGATCTTCAA GAGTGAGGAG AGGACGAGGC AGTTCTGGGT
TTCCTACAAC GACGGAGACC AGTGCGCCTC GAACCCCTGC CTGAATGGGG GCTCCTGCGA
GGACCAGCTC CAGGCCTACA TCTGCTTCTG CCCGGAAGGC TTCGAGGGTC GGAACTGCGA
AACCAACAAG AAGAGCCAGC TGATCTGCAT GAATGACAAC GGGGGCTGCG AGCAGTACTG
CAGCGACCAC GCGGAGGCCG GGCGCTCCTG CTGGTGCCAT GAGGGGTACG CCCTCCAGGA
GGACGGGGTG TCCTGTGAGC CCACAGTTGA ATATCCGTGT GGAAAAATAC CTGTTCTGGA
AAAAAGAAAT GACAGCAACC CCCAGGGCCG AATCGTAGGT GGCAAGGTCT GCCCCAAAGG
CGAGTGTCCC TGGCAGGCCA TGCTGAAGCT GAAAGGGGCG CTGCTGTGCG GGGGCACCCT
GCTGAACACC AGCTGGGTGG TCTCTGCAGC CCACTGCTTC GACAGGATCC GGAGCTGGAA


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinF7coagulation factor VII isoform b precursor [Homo sapiens]. 390e-109O
Contig/Assembly ProteinF7coagulation factor VII isoform a precursor [Homo sapiens]. 382e-106O
Contig/Assembly ProteinF9coagulation factor IX preproprotein [Homo sapiens]. 2147e-56O
Contig/Assembly ProteinF10coagulation factor X preproprotein [Homo sapiens]. 2032e-52O
Contig/Assembly ProteinPROCvitamin K-dependent protein C preproprotein [Homo sapiens]. 1786e-45O
Contig/Assembly ProteinPROZvitamin K-dependent protein Z precursor [Homo sapiens]. 1454e-35O
Contig/Assembly ProteinGAS6growth arrest-specific protein 6 isoform 1 precursor [Homo sapiens]. 1041e-22O
Contig/Assembly ProteinPROS1vitamin K-dependent protein S preproprotein [Homo sapiens]. 97.12e-20O
Contig/Assembly ProteinPRRG1transmembrane gamma-carboxyglutamic acid protein 1 isoform 1 precursor [Homo sapiens]. 83.23e-16O
Contig/Assembly ProteinPRRG1transmembrane gamma-carboxyglutamic acid protein 1 isoform 1 precursor [Homo sapiens]. 83.23e-16O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinF7coagulation factor VII precursor [Mus musculus]. 3601e-99O
Contig/Assembly ProteinF10coagulation factor X isoform 1 preproprotein [Mus musculus]. 2071e-53O
Contig/Assembly ProteinF10coagulation factor X isoform 2 preproprotein [Mus musculus]. 2071e-53O
Contig/Assembly ProteinF9coagulation factor IX precursor [Mus musculus]. 2024e-52O
Contig/Assembly ProteinProcvitamin K-dependent protein C [Mus musculus]. 2002e-51O
Contig/Assembly ProteinProcvitamin K-dependent protein C [Mus musculus]. 2002e-51O
Contig/Assembly ProteinProcvitamin K-dependent protein C [Mus musculus]. 2002e-51O
Contig/Assembly ProteinProzvitamin K-dependent protein Z precursor [Mus musculus]. 1493e-36O
Contig/Assembly ProteinGas6growth arrest-specific protein 6 precursor [Mus musculus]. 1063e-23O
Contig/Assembly ProteinPros1vitamin K-dependent protein S precursor [Mus musculus]. 95.94e-20O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinF7coagulation factor VII [Canis lupus familiaris]. 407e-114O
Contig/Assembly ProteinF9coagulation factor IX preproprotein [Canis lupus familiaris]. 2032e-52O
Contig/Assembly ProteinLOC476993PREDICTED: similar to Coagulation factor X precursor (Stuart factor) (Stuart-Prower factor) isoform 2 [Canis familiaris]. 2018e-52O
Contig/Assembly ProteinLOC476993PREDICTED: similar to Coagulation factor X precursor (Stuart factor) (Stuart-Prower factor) isoform 1 [Canis familiaris]. 2018e-52O
Contig/Assembly ProteinLOC476993PREDICTED: similar to Coagulation factor X precursor (Stuart factor) (Stuart-Prower factor) isoform 3 [Canis familiaris]. 2018e-52O
Contig/Assembly ProteinPROCvitamin K-dependent protein C [Canis lupus familiaris]. 1992e-51O
Contig/Assembly ProteinLOC607745PREDICTED: similar to growth arrest-specific 6 [Canis familiaris]. 99.45e-21O
Contig/Assembly ProteinLOC478529PREDICTED: similar to Vitamin K-dependent protein S precursor [Canis familiaris]. 92.84e-19O
Contig/Assembly ProteinLOC492217PREDICTED: similar to Transmembrane gamma-carboxyglutamic acid protein 3 precursor (Proline-rich Gla protein 3) (Proline-rich gamma-carboxyglutamic acid protein 3) [Canis familiaris]. 827e-16O
Contig/Assembly ProteinLOC491821PREDICTED: similar to Transmembrane gamma-carboxyglutamic acid protein 1 precursor (Proline-rich Gla protein 1) (Proline-rich gamma-carboxyglutamic acid protein 1) [Canis familiaris]. 80.52e-15O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinF7coagulation factor VII precursor [Bos taurus]. 403e-112O
Contig/Assembly ProteinLOC785517PREDICTED: coagulation factor VII-like [Bos taurus]. 403e-112O
Contig/Assembly ProteinF10coagulation factor X [Bos taurus]. 2116e-55O
Contig/Assembly ProteinPROCvitamin K-dependent protein C [Bos taurus]. 1841e-46O
Contig/Assembly ProteinPROZPREDICTED: protein Z, vitamin K-dependent plasma glycoprotein [Bos taurus]. 1486e-36O
Contig/Assembly ProteinPROZPREDICTED: vitamin K-dependent protein Z [Bos taurus]. 1486e-36O
Contig/Assembly ProteinF10PREDICTED: coagulation factor X-like, partial [Bos taurus]. 1324e-31O
Contig/Assembly ProteinGAS6PREDICTED: growth arrest-specific 6 [Bos taurus]. 97.42e-20O
Contig/Assembly ProteinGAS6PREDICTED: growth arrest-specific 6 [Bos taurus]. 97.12e-20O
Contig/Assembly ProteinPROS1vitamin K-dependent protein S precursor [Bos taurus]. 95.18e-20O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinF7coagulation factor VII [Sus scrofa]. 494e-140O
Contig/Assembly ProteinF9coagulation factor IX [Sus scrofa]. 2092e-54O
Contig/Assembly ProteinLOC733662coagulation factor X protein [Sus scrofa]. 1991e-51O
Contig/Assembly ProteinPROCvitamin K-dependent protein C [Sus scrofa]. 1975e-51O
Contig/Assembly ProteinLOC100519331PREDICTED: growth arrest-specific protein 6-like [Sus scrofa]. 95.15e-20
Contig/Assembly ProteinPROS1PREDICTED: vitamin K-dependent protein S, partial [Sus scrofa]. 93.22e-19O
Contig/Assembly ProteinLOC100623926PREDICTED: transmembrane gamma-carboxyglutamic acid protein 1-like [Sus scrofa]. 83.62e-16O
Contig/Assembly ProteinLOC100515642PREDICTED: transmembrane gamma-carboxyglutamic acid protein 3-like [Sus scrofa]. 81.66e-16
Contig/Assembly ProteinLOC100622136PREDICTED: transmembrane gamma-carboxyglutamic acid protein 3-like [Sus scrofa]. 80.51e-15
Contig/Assembly ProteinLOC100624308PREDICTED: transmembrane protease serine 6-like [Sus scrofa]. 771e-14O


Assembly Members: 6      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
LVRM10019B10LVRM1_0019_B10.bBP138323 
LVRM10049B09LVRM1_0049_B09.bBP449472 AK346094
LVRM10104E04LVRM1_0104_E04.bBP451596 
LVRM10124B02LVRM1_0124_B02.bBP449026 
LVRM10140D05LVRM1_0140_D05.bBP450871 
LVRM10185G06LVRM1_0185_G06.bCJ005895 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
454C020.333MSAGC/S
T040.667AGT/S


Alignment:      TOP

20110601C-004213 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVRM1_0049_B09.b : nagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0185_G06.b :
LVRM1_0104_E04.b :
LVRM1_0124_B02.b :
LVRM1_0019_B10.b :
LVRM1_0140_D05.b :
20110601C-004213 : .TTCCCGGTGCAGCTCCCAGACTCACCCCTCACCCTGCACCTCAAAGGAGCCTGGCTGGG
---------+---------+---------+---------+---------+---------+ 59
LVRM1_0049_B09.b : xTTCCCGGTGCAGCTCCCAGACTCACCCCTCACCCTGCACCTCAAAGGAGCCTGGCTGGG
LVRM1_0185_G06.b :
LVRM1_0104_E04.b :
LVRM1_0124_B02.b :
LVRM1_0019_B10.b :
LVRM1_0140_D05.b :
20110601C-004213 : TGCAGCCTGGATTCCCGGTGGCCCGTCCATCTGTCCCTAGTCCCCTGTCCGGCAGCCCTT
---------+---------+---------+---------+---------+---------+ 119
LVRM1_0049_B09.b : TGCAGCCTGGATTCCCGGTGGCCCGTCCATCTGTCCCTAGTCCCCTGTCCGGCAGCCCTT
LVRM1_0185_G06.b :
LVRM1_0104_E04.b :
LVRM1_0124_B02.b :
LVRM1_0019_B10.b :
LVRM1_0140_D05.b :
20110601C-004213 : GGCCCGGGATCTCACGCCCGCGTGTGTGGGAGGCCTCCCTCCCCCCGCCTCTGGCCCTAA
---------+---------+---------+---------+---------+---------+ 179
LVRM1_0049_B09.b : GGCCCGGGATCTCACGCCCGCGTGTGTGGGAGGCCTCCCTCCCCCCGCCTCTGGCCCTAA
LVRM1_0185_G06.b : agttgtxxxxxxxxxxxxxxxxxxxxx
LVRM1_0104_E04.b : txxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0124_B02.b : nagttgacxxxxxxxxxxxxxxxxxxxx
LVRM1_0019_B10.b : agttgacxxxxxxxxxxxxxxxxxxx
LVRM1_0140_D05.b : nagttgtcxxxxxxxxxxxxxxxxxxxxxxx
20110601C-004213 : GAGACTTTGCCCGCCTCCCCGACCGGGAAAGTCAACAGACGGCGTGCCCCGCGGGCCTCG
---------+---------+---------+---------+---------+---------+ 239
LVRM1_0049_B09.b : GAGACTTTGCCCGCCTCCCCGACCGGGAAAGTCAACAGACGGCGTGCCCCGCGGGCCTCG
LVRM1_0185_G06.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAGACGGCGTGCCCCGCGGGCCTCG
LVRM1_0104_E04.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAGACGGCGTGCCCCGCGGGCCTCG
LVRM1_0124_B02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAGACGGCGTGCCCCGCGGGCCTCG
LVRM1_0019_B10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCAGACGGCGTGCCCCGCGGGCCTCG
LVRM1_0140_D05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgtcaaCAGACGGCGTGCCCCGCGGGCCTCG
20110601C-004213 : CCATGGCCTCCCTGCGGCCGGCCCTTCTCTGCCTCCTCCTCTGCCTGCAGGGGTCCCTGG
---------+---------+---------+---------+---------+---------+ 299
LVRM1_0049_B09.b : CCATGGCCTCCCTGCGGCCGGCCCTTCTCTGCCTCCTCCTCTGCCTGCAGGGGTCCCTGG
LVRM1_0185_G06.b : CCATGGCCTCCCTGCGGCCGGCCCTTCTCTGCCTCCTCCTCTGCCTGCAGGGGTCCCTGG
LVRM1_0104_E04.b : CCATGGCCTCCCTGCGGCCGGCCCTTCTCTGCCTCCTCCTCTGCCTGCAGGGGTCCCTGG
LVRM1_0124_B02.b : CCATGGCCTCCCTGCGGCCGGCCCTTCTCCGCCTCCTCCTCTGCCTGCAGGGGTCCCTGG
LVRM1_0019_B10.b : CCATGGCCTCCCTGCGGCCGGCCCTTCTCTGCCTCCTCCTCTGCCTGCAGGGGTCCCTGG
LVRM1_0140_D05.b : CCATGGCCTCCCTGCGGCCGGCCCTTCTCTGCCTCCTCCTCTGCCTGCAGGGGTCCCTGG
20110601C-004213 : CGGCAGTTTTTGTTGCCCAGGAACAAGCCCACAGCCTCCTGCACAGGTTCCGGCGCGCCA
---------+---------+---------+---------+---------+---------+ 359
LVRM1_0049_B09.b : CGGCAGTTTTTGTTGCCCAGGAACAAGCCCACAGCCTCCTGCACAGGTTCCGGCGCGCCA
LVRM1_0185_G06.b : CGGCAGTTTTTGTTGCCCAGGAACAAGCCCACAGCCTCCTGCACAGGTTCCGGCGCGCCA
LVRM1_0104_E04.b : CGGCAGTTTTTGTTGCCCAGGAACAAGCCCACAGCCTCCTGCGCAGGTTCCGGCGCGCCA
LVRM1_0124_B02.b : CGGCAGTTTTTGTTGCCCAGGAACAAGCCCACAGCCTCCTGCACAGGTTCCGGCGCGCCA
LVRM1_0019_B10.b : CGGCAGTTTTTGTTGCCCAGGAACAAGCCCACAGCCTCCTGCACAGGTTCCGGCGCGCCA
LVRM1_0140_D05.b : CGGCAGTTTTTGTTGCCCAGGAACAAGCCCACAGCCTCCTGCACAGGTTCCGGCGCGCCA
20110601C-004213 : ACTCATTCCTGGAGGAGCTGTGGCCCGGCTCGCTGGAGAGGGAGTGCAGGGAGGAGCAGT
---------+---------+---------+---------+---------+---------+ 419
LVRM1_0049_B09.b : ACTCATTCCTGGAGGAGCTGTGGCCCGGCTCGCTGGAGAGGGAGTGCAGGGAGGAGCAGT
LVRM1_0185_G06.b : ACTCATTCCTGGAGGAGCTGTGGCCCGGCTCGCTGGAGAGGGAGTGCAGGGAGGAGCAGT
LVRM1_0104_E04.b : ACTCATTCCTGGAGGAGCTGTGGCCCGGCTCGCTGGAGAGGGAGTGCAGGGAGGAGCAGT
LVRM1_0124_B02.b : ACTCATTCCTGGAGGAGCTGTGGCCCGGCTCGCTGGAGAGGGAGTGCAGGGAGGAGCAGT
LVRM1_0019_B10.b : ACTCATTCCTGGAGGAGCTGTGGCCCGGCTCGCTGGAGAGGGAGTGCAGGGAGGAGCAGT
LVRM1_0140_D05.b : ACTCATTCCTGGAGGAGCTGTGGCCCGGCTCGCTGGAGAGGGAGTGCAGGGAGGAGCAGT
20110601C-004213 : GCTCCTTCGAGGAGGCCCGGGAGATCTTCAAGAGTGAGGAGAGGACGAGGCAGTTCTGGG
---------+---------+---------+---------+---------+---------+ 479
LVRM1_0049_B09.b : GCTCCTTCGAGGAGGCCCGGGAGATCTTCAAGAGTGAGGAGAGGACGAGGCAGTTCTGGG
LVRM1_0185_G06.b : GCTCCTTCGAGGAGGCCCGGGAGATCTTCAAGAGTGAGGAGAGGACGAGGCAGTTCTGGG
LVRM1_0104_E04.b : GCTCCTTCGAGGAGGCCCGGGAGATCTTCAAGAGCGAGGAGAGGACGAGGCAGTTCTGGG
LVRM1_0124_B02.b : GCTCCTTCGAGGAGGCCCGGGAGATCTTCAAGAGTGAGGAGAGGACGAGGCAGTTCTGGG
LVRM1_0019_B10.b : GCTCCTTCGAGGAGGCCCGGGAGATCTTCAAGAGCGAGGAGAGGACGAGGCAGTTCTGGG
LVRM1_0140_D05.b : GCTCCTTCGAGGAGGCCCGGGAGATCTTCAAGAGTGAGGAGAGGACGAGGCAGTTCTGGG
20110601C-004213 : TTTCCTACAACGACGGAGACCAGTGCGCCTCGAACCCCTGCCTGAATGGGGGCTCCTGCG
---------+---------+---------+---------+---------+---------+ 539
LVRM1_0049_B09.b : TTTCCTACAACGACGGAGACCAGTGCGCCTCGAACCCCTGCCTGAATGGGGGCTCCTGCG
LVRM1_0185_G06.b : TTTCCTACAACGACGGAGACCAGTGCGCCTCGAACCCCTGCCTGAATGGGGGCTCCTGCG
LVRM1_0104_E04.b : TTTCCTACAACGACGGAGACCAGTGCGCCTCGAACCCCTGCCTGAATGGGGGCTCCTGCG
LVRM1_0124_B02.b : TTTCCTACAACGACGGAGACCAGTGCGCCTCGAACCCCTGCCTGAATGGGGGCTCCTGCG
LVRM1_0019_B10.b : TTTCCTACAACGACGGAGACCAGTGCGCCTCGAACCCCTGCCTGAATGGGGGCTCCTGCG
LVRM1_0140_D05.b : TTTCCTACAACGACGGAGACCAGTGCGCCTCGAACCCCTGCCTGAATGGGGGCTCCTGCG
20110601C-004213 : AGGACCAGCTCCAGGCCTACATCTGCTTCTGCCCGGAAGGCTTCGAGGGTCGGAACTGCG
---------+---------+---------+---------+---------+---------+ 599
LVRM1_0049_B09.b : AGGACCAGCTCCAGGCCTACATCTGCTTCTGCCCGGAAGGCTTCGAGGGTCGGAACTGCG
LVRM1_0185_G06.b : AGGACCAGCTCCAGGCCTA**TCTGCTTCTGCCCGGAAAGCTTCGAGGGTCGGAACTGCN
LVRM1_0104_E04.b : AGGACCAGCTCCAGGCCTACATCTGCTTCTGCCCGGAAAGCTACGAGGGTCGGAACTGCG
LVRM1_0124_B02.b : AGGACCAGCTCCAGGCCTACATCTGCTTCTGCCCGGAAGGCTTCGAGGGTCGGAACTGCG
LVRM1_0019_B10.b : AGGACCAGCTCCAGGCCTACATCTGCTTCTGCCCGGAAGGCTTCGAGGGTCGGAACTGCG
LVRM1_0140_D05.b : AGGACCAGCTCCAGGCCTACATCTGCTTCTGCCCGGAAGGCTTCGAGGGTCGGAACTGCG
20110601C-004213 : AAACCAACAAGAAGAGCCAGCTGATCTGCATGAATGACAACGGGGGCTGCGAGCAGTACT
---------+---------+---------+---------+---------+---------+ 659
LVRM1_0049_B09.b : AAACCAACAAGAAGAGCCAGCTGATCTGCATGAATGACAACGGGGGCTGCGAGCAGTACT
LVRM1_0185_G06.b : AAACCAACAAGAAGAGCCAGCTGATCTGCATGAATGACAACGGGGGCTGCGAACAGTACT
LVRM1_0104_E04.b : AAACCAACAAGAAGAGCCAGCTGATCTGCATGAATGACAACGGGGGCTGCGAGCAGTACT
LVRM1_0124_B02.b : AAACCAACAAGAAGAGCCAGCTGATCTGCATGAATGACAACGGGGGCTGCGAGCAGTACT
LVRM1_0019_B10.b : AAACCAACAAGAAGAGCCAGCTGATCTGCATGAATGACAACGGGGGCTGCGAGCAGTACT
LVRM1_0140_D05.b : AAACCAACAAGAAGAGCCAGCTGATCTGCATGAATGACAACGGGGGCTGCGAGCAGTACT
20110601C-004213 : GCAGCGACCACGCGGAGGCCGGGCGCTCCTGCTGGTGCCATGAGGGGTACGCCCTCCAGG
---------+---------+---------+---------+---------+---------+ 719
LVRM1_0049_B09.b : GCAGCGACCACGCGGAAGCCGGGCGCTCCTGCTGGTGCCATNGAGGGTACGCCCTCCACG
LVRM1_0185_G06.b : GCAACGACCACGCGGAGGCCAGGCGCTCCTGCTGGTGACATGAAGGGTATACCCTCCGAG
LVRM1_0104_E04.b : GCAGCGACCACGCGGAGGCCGGGCGCTCCTGCTGGTGCCATGAGGGGTACGCCCTCCAGG
LVRM1_0124_B02.b : GCAGCGACCACGCGGAGGCCGGGCGCTCCTGCTGGTGCCATGAGGGGTACGCCCTCCAGG
LVRM1_0019_B10.b : GCAGCGACCACGCGGAGGCCGGGCGCTCCTGCTGGTGCCATGAGGGGTACGCCCTCCAGG
LVRM1_0140_D05.b : GCAGCGACCACGCGGAGGCCGGGCGCTCCTGCTGGTGCCATGAGGGGTACGCCCTCCAGG
20110601C-004213 : AGGACGGGGTGTCCTGTGAGCCCACAGTTGAATATCCGTGTGGAAAAATACCTGTTCTGG
---------+---------+---------+---------+---------+---------+ 779
LVRM1_0049_B09.b : A*GACGGGGTGTCCTGTGAGCCCACATTTGAta
LVRM1_0185_G06.b : ATGAAGGGGTGTCatggcaaccgaaagttgaaaaacccgtagaagaaaacccgaaccgaa
LVRM1_0104_E04.b : AGGACGGGGTGTCCTGTGAGCCCACAGTTGAATATCCGTGTGGTAAAATACCTGTTCTGG
LVRM1_0124_B02.b : AGGACGGGGTGTCCTGTGAGCCCACAGTTGAATATCCGTGTGGAAAAATACCTGTTCTGG
LVRM1_0019_B10.b : AGGACGGGGTGTCCTGTGAGCCCACAGTTGAATATCCGTGTGGAAAAATACCTGTTCTGG
LVRM1_0140_D05.b : AGGACGGGGTGTCCTGTGAGCCCACAGTTGAATATCCGTGTGGAAAAATACCTGTTCTGG
20110601C-004213 : AAAAAAGAAATGACAGCAACCCCCAGGGCCGAATCGTAGGTGGCAAGGTCTGCCCCAAAG
---------+---------+---------+---------+---------+---------+ 839
LVRM1_0049_B09.b :
LVRM1_0185_G06.b : aaaaaaaaatacaaacagactcgggaataaagcgtatgtagggagatcatagccaaaaga
LVRM1_0104_E04.b : AAAACAGAAATGACAGCAACCCCCAGGGCCGAATCGTAGGTGGCAAGGTCTGCCCCAAAG
LVRM1_0124_B02.b : AAAAAAGAAATGACAGCAACCCTCAGGGCCGAATCGTAGGTGGCAAGGTCTGCCCCCAAG
LVRM1_0019_B10.b : AAAAAAGAAATGACAGCAACCCCCAGGGCCGAATCGTANGTGGCAAGGTCTGCCCCCAAG
LVRM1_0140_D05.b : AAAAAAGAAATGACAGCAACCCTCAGGGCCGAATCGTAGGTGGCAAGGTCTGCCCCAAAG
20110601C-004213 : GCGAGTGTCCCTGGCAGGCCATGCTGAAGCTGAAAGGGGCGCTGCTGTGCGGGGGCACCC
---------+---------+---------+---------+---------+---------+ 899
LVRM1_0049_B09.b :
LVRM1_0185_G06.b : taacggtgcagacaaaaaggaccgcgaaaaggaagaaacgtgagtatgaaacgcgcgaga
LVRM1_0104_E04.b : GCGAATGTTCCCTGGCAGCCATGCTGAAGCTGAAAGGGGCGCTGCTGTGCGGGGGCACCC
LVRM1_0124_B02.b : GCGAGTGTCCCTGGCAGGCCATGCTGAAACTGAAAGGGGCGCTGCTGTGCGGGGGCACCC
LVRM1_0019_B10.b : GCGAGTGTCCCTGGCAGGCCATGCTGAAGCTGAAAGGGGCGCTGCTGTGCNGGGGCACCC
LVRM1_0140_D05.b : GCGAGTGTCCCTGGCAGGCCATGCTGAAGCTGAAAGGGGCGCTGCTGTGCGGGGGCACCC
20110601C-004213 : TGCTGAACACCAGCTGGGTGGTCTCTGCAGCCCACTGCTTCGACAGGATCCGGAGCTGGA
---------+---------+---------+---------+---------+---------+ 959
LVRM1_0049_B09.b :
LVRM1_0185_G06.b : agaaagagaaaccagtatgggaggataggcggagaaccgaggagagaggaggataaaacg
LVRM1_0104_E04.b : TGCTtgacaccagctgggtggtttctgcagcccatgcttccacaggatcggtactg
LVRM1_0124_B02.b : TGCTGAACAC*AGCTGGGTGGTCTCTGCA*CCCACTGCTTCGACAGGATCcggactg
LVRM1_0019_B10.b : TGCTGAACACCAGCTGGGTGGTCTCTGCAGCCCACTGCTTCGACAGGATCGGGAGCTGGA
LVRM1_0140_D05.b : TGCTGAACACCAGCTGGGTGGTCTCTGCAGCCCACTGCTTCGACAGGATCCGGAGCTGGA
20110601C-004213 : A...........................................................
---------+---------+---------+---------+---------+---------+ 960
LVRM1_0049_B09.b :
LVRM1_0185_G06.b :
LVRM1_0104_E04.b :
LVRM1_0124_B02.b :
LVRM1_0019_B10.b : Aggacctgacngtggtgctaggcgagcacgacctcacn
LVRM1_0140_D05.b : Aaggacctgacgtggtgctaggcgagc