Assembly Overview: TOP
BLAST on RefSeq (Human): TOP
| | Locus | Definition | Score | E value | FL |
---|
|
| PCK2 | phosphoenolpyruvate carboxykinase [GTP], mitochondrial isoform 2 precursor [Homo sapiens]. | 380 | e-105 | O |
|
| PCK2 | phosphoenolpyruvate carboxykinase [GTP], mitochondrial isoform 1 precursor [Homo sapiens]. | 380 | e-105 | O |
|
| PCK1 | phosphoenolpyruvate carboxykinase, cytosolic [GTP] [Homo sapiens]. | 270 | 2e-72 | O |
BLAST on RefSeq (Mouse): TOP
| | Locus | Definition | Score | E value | FL |
---|
|
| Pck2 | phosphoenolpyruvate carboxykinase [GTP], mitochondrial [Mus musculus]. | 365 | e-101 | O |
|
| Pck1 | phosphoenolpyruvate carboxykinase, cytosolic [GTP] [Mus musculus]. | 264 | 8e-71 | O |
BLAST on RefSeq (Dog): TOP
| | Locus | Definition | Score | E value | FL |
---|
|
| LOC480255 | PREDICTED: similar to mitochondrial phosphoenolpyruvate carboxykinase 2 isoform 1 precursor isoform 8 [Canis familiaris]. | 379 | e-105 | O |
|
| LOC480255 | PREDICTED: similar to mitochondrial phosphoenolpyruvate carboxykinase 2 isoform 1 precursor isoform 6 [Canis familiaris]. | 377 | e-105 | O |
|
| LOC480255 | PREDICTED: similar to mitochondrial phosphoenolpyruvate carboxykinase 2 isoform 1 precursor isoform 5 [Canis familiaris]. | 377 | e-105 | O |
|
| LOC480255 | PREDICTED: similar to mitochondrial phosphoenolpyruvate carboxykinase 2 isoform 1 precursor isoform 4 [Canis familiaris]. | 377 | e-105 | O |
|
| LOC480255 | PREDICTED: similar to mitochondrial phosphoenolpyruvate carboxykinase 2 isoform 1 precursor isoform 3 [Canis familiaris]. | 377 | e-105 | O |
|
| LOC480255 | PREDICTED: similar to mitochondrial phosphoenolpyruvate carboxykinase 2 isoform 1 precursor isoform 2 [Canis familiaris]. | 377 | e-105 | O |
|
| LOC480255 | PREDICTED: similar to mitochondrial phosphoenolpyruvate carboxykinase 2 isoform 1 precursor isoform 1 [Canis familiaris]. | 377 | e-105 | O |
|
| LOC480255 | PREDICTED: similar to mitochondrial phosphoenolpyruvate carboxykinase 2 isoform 1 precursor isoform 7 [Canis familiaris]. | 377 | e-104 | O |
|
| PCK1 | phosphoenolpyruvate carboxykinase, cytosolic [Canis lupus familiaris]. | 267 | 1e-71 | O |
BLAST on RefSeq (Cattle): TOP
| | Locus | Definition | Score | E value | FL |
---|
|
| PCK2 | phosphoenolpyruvate carboxykinase [GTP], mitochondrial [Bos taurus]. | 385 | e-107 | O |
|
| PCK2 | PREDICTED: phosphoenolpyruvate carboxykinase 2 (mitochondrial) [Bos taurus]. | 385 | e-107 | O |
|
| PCK1 | phosphoenolpyruvate carboxykinase, cytosolic [GTP] [Bos taurus]. | 265 | 7e-71 | O |
BLAST on RefSeq (Pig): TOP
| | Locus | Definition | Score | E value | FL |
---|
|
| PCK2 | phosphoenolpyruvate carboxykinase [GTP], mitochondrial [Sus scrofa]. | 400 | e-112 | O |
|
| PCK1 | phosphoenolpyruvate carboxykinase, cytosolic [Sus scrofa]. | 264 | 6e-71 | O |
Alignment: TOP
20110601C-004515 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVRM1_0039_C12.b : gagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0182_G01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0110_E12.b : nagttgtcxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
KDN01_0073_E07.b :
20110601C-004515 : GCTGCTCACTGCGCCCGCGCTCGCCTCCTTCCCCGCCTTCCACATTTCCCCGGCTCTTCG
---------+---------+---------+---------+---------+---------+ 60
LVRM1_0039_C12.b : GCTGCTCACTGCGCCCGCGCTCGCCTCCTTCCCCGCCTTCCACATCTCCCCGGCTCTTCG
LVRM1_0182_G01.b : cCTGCTCACTGCGCCCGCGCTCGCCTCCTTCCCCGCCTTCCACATTTCCCCGGCTCTTCG
LVRM1_0110_E12.b : xCTGCTCACTGCGCCCGCGCTCGCCTCCTTCCCCGCCTTCCACATTTCCCCGGCTCTTCG
KDN01_0073_E07.b : nncctgcggtggctctggacTTTCCCCGGCTCTTCG
20110601C-004515 : GTTTTCGCGGCCACCCCGCAGCCGTCGCCCAGGTGCCATGGCCGCTATGTACCGCCCCGG
---------+---------+---------+---------+---------+---------+ 120
LVRM1_0039_C12.b : GTTTTCGCGGCCACCCCGCAGCCGTCGCCCAGGTGCCATGGCCGCTATGTACCGCCCCGG
LVRM1_0182_G01.b : GTTTTCGCGGCCACCCCGCAGCCGTCGCCCAGGTGCCATGGCCGCTATGTACCGCCCCGG
LVRM1_0110_E12.b : GTTTTCGCGGCCACCCCGCAGCCGTCGCCCAGGTGCCATGGCCGCTATGTACCGCCCCGG
KDN01_0073_E07.b : *TTTTCGCGGCCACCCCGCAGCCGTCGCCCAGGTGCCATGGCCGCTATGTACCGCCCCGG
20110601C-004515 : CCTGCGGCTTAGCTGGCATGGGCTGAGCTCCTGGGGCTGGTCATCACGGCGCAGCATCCA
---------+---------+---------+---------+---------+---------+ 180
LVRM1_0039_C12.b : CCTGCGGCTTAGCTGGCATGGGCTGAGCTCCTGGGGCTGGTCATCACGGCGCAGCATCCA
LVRM1_0182_G01.b : CCTGCGGCTTAGCTGGCATGGGCTGAGCTCCTGGGGATGGTCATCACGGCGCAGCATCCA
LVRM1_0110_E12.b : CCTGCGGCTTAGCTGGCATGGGCTGAGCTCCTGGGGATGGTCATCACGGCGCAGCATCCA
KDN01_0073_E07.b : CCTGCGGCTTAGCTGGCATGGGCTGAGCTCCTGGGGCTGGTCATCACGGCGCAGCATCCA
20110601C-004515 : GGCCCTGCGAGTACTCAATGGAGATCTGGGCCAGCTGCCTGCTGGGGTTCGAGACTTTGT
---------+---------+---------+---------+---------+---------+ 240
LVRM1_0039_C12.b : GGCCCTGCGAGTACTCAATGGAGATCTGGACCAGCTGCCTGCTGGGGTTCGAGACTTTGT
LVRM1_0182_G01.b : GGCCCTGCGAGTACTCAATGGAGATCTGGGCCAGCTGCCTGCTGGGGTTCGAGACTTTGT
LVRM1_0110_E12.b : GGCCCTGCGAGTACTCAATGGAGATCTGGGCCAGCTGCCTGCTGGGGTTCGAGACTTTGT
KDN01_0073_E07.b : GGCCCTGCGAGTACTCAATGGAGATCTGGGCCAGCTGCCTGCTGGGGTTCGAGACTTTGT
20110601C-004515 : GGAGCGCAGCGCCCGCCTCTGCCAACCAGAGGGCATCCACATCTGTGATGGGACTGAGGC
---------+---------+---------+---------+---------+---------+ 300
LVRM1_0039_C12.b : GGAGCGCAGCGCCCGCCTCTGCCAACCAGAGGGCATCCACATCTGTGATGGGACTGAGGC
LVRM1_0182_G01.b : GGAGCGCAGCGCCCGCCTCTGCCAACCAGAGGGCATCCACATCTGTGATGGGACTGAGGC
LVRM1_0110_E12.b : GGAGCGCAGCGCCCGCCTCTGCCAACCAGAGGGCATCCACATCTGTGATGGGACTGAGGC
KDN01_0073_E07.b : GGAGCGCAGCGCCCGCCTCTGCCAACCAGAGGGCATCCACATCTGTGATGGGACTGAGGC
20110601C-004515 : AGAGAACACTGCCACCCTGGCTCTGCTGGAACAGCAGGGCCTCATCCGAAAGCTCCCCAA
---------+---------+---------+---------+---------+---------+ 360
LVRM1_0039_C12.b : AGAGAACACTGCCACCCTGGCTCTGCTGGAACAGCAGGGCCTCATCCAAAAGCTCCCCAA
LVRM1_0182_G01.b : AGAGAACACTGCCACCCTGGCTCTGCTGGAACAGCAGGGCCTCATCCGAAAGCTCCCCAA
LVRM1_0110_E12.b : AGAGAACACTGCCACCCTGGCTCTGCTGGAACAGCAGGGCCTCATCCGAAAGCTCCCCAA
KDN01_0073_E07.b : AGAGAACACTGCCACCCTGGCTCTGCTGGAACAGCAGGGCCTCATCCGAAAGCTCCCCAA
20110601C-004515 : GTACAACAACTGCTGGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGTAGAAAGCAA
---------+---------+---------+---------+---------+---------+ 420
LVRM1_0039_C12.b : GTACAACAACTGCTGGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGTAGAAAGCAA
LVRM1_0182_G01.b : GTACAACAACTGCTGGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGTAGAAAGCAA
LVRM1_0110_E12.b : GTACAACAACTGCTGGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGTAGAAAGCAA
KDN01_0073_E07.b : GTACAACAACTGCTGGCTGGCCCGCACAGACCCCAAGGATGTGGCACGAGTAGAAAGCAA
20110601C-004515 : GACGGTGATTGTAACTCCTTCTCAACGGGACACGGTGCCCCTCCCAGCTGGTGGGGCCCG
---------+---------+---------+---------+---------+---------+ 480
LVRM1_0039_C12.b : GACGGTGATTGTAACTCCTTCTCAACGGGACACGGTGCCCCTCCCAGCTGGTGGGGCCCG
LVRM1_0182_G01.b : GACGGTGATTGTAACTCCTTCTCAACGGGACACGGTGCCCCTCCCAGCTGGTGGGGCCCG
LVRM1_0110_E12.b : GACGGTGATTGTAACTCCTTCTCAACGGGACACGGTGCCCCTCCCAGCTGGTGGGGCCCG
KDN01_0073_E07.b : GACGGTGATTGTAACTCCTTCTCAACGGGACACGGTGCCCCTCCCAGCTGGTGGGGCCCG
20110601C-004515 : TGGGCAGCTGGGCAACTGGATGTCCCCAGCTGAGTTCCAGCAAGCTGTGGATGAGAGGTT
---------+---------+---------+---------+---------+---------+ 540
LVRM1_0039_C12.b : TGGGCAGCTGGGCAACTGGATGTCCCCAGCTGAGTTCCAGCAAGCTGTGGATGAGAGGTT
LVRM1_0182_G01.b : TGGGCAGCTGGGCAACTGGATGTCCCCAGCTGAGTTCCAGCAAGCTGTGGATGAGAGGTT
LVRM1_0110_E12.b : TGGGCAGCTGGGCAACTGGATGTCCCCAGCTGAGTTCCAGCAAGCTGTGGATGAGAGGTT
KDN01_0073_E07.b : TGGGCAGCTGGGCAACTGGATGTCCCCAGCTGAGTTCCAGCAAGCTGTGGATGAGAGGTT
20110601C-004515 : TCCAGGCTGCATGCAGGGCCGAACCATGTATGTGCTTCCATTCAGCATGGGTCCTGTGGG
---------+---------+---------+---------+---------+---------+ 600
LVRM1_0039_C12.b : TCCAGGCTGCATGCAGGGCCGAACCATGTATGTGCTTCCATTCAGCATGGGTCCTGTGGG
LVRM1_0182_G01.b : TCCAGGCTGCATGCAGGGCCGAACCATGTATGTGCTTCCATTCAGCATGGGTCCTGTGGG
LVRM1_0110_E12.b : TCCAGGCTGCATGCAGGGCCGAACCATGTATGTGCTTCCATTCAGCATGGGTCCTGTGGG
KDN01_0073_E07.b : TCCAGGCTGCATGCAGGGCCGAACCATGTATGTGCTTCCATTCAGCATGGGTCCTGTGGG
20110601C-004515 : CTCCCCACTATCCCGCATCGGAGTGCAGCTCACGGACTCAGCCTATGTGGTGGCTAGTAT
---------+---------+---------+---------+---------+---------+ 660
LVRM1_0039_C12.b : CTCCCCACTGTCCCGCATCGGAGTGCAGCTCACGGACTCAGCCTATGTGGTGGCTAGTAT
LVRM1_0182_G01.b : CTCCCCACTGTCCCGCATCGGAGTGCAGCTCAGCGACTCAGCCTATGTGGTGGCTAATAT
LVRM1_0110_E12.b : CTCCCCACTGTCCCGCATCGGAGTGCAGCTCACGGACTCAGCCTATGTGGTGGCTAGTAT
KDN01_0073_E07.b : CTCCCCACTATCCCGCATCGGAGTGCAGCTCACGGACTCAGCCTATGTGGTGGCTAGTAT
20110601C-004515 : GCGGATTATGACCCGACTGGGGAAACCTGTGCTTCAGGCCCTGGGAGATGGCGACTTCGT
---------+---------+---------+---------+---------+---------+ 720
LVRM1_0039_C12.b : GCGGATTATGACCCGACTGGGGAAACCTGTGCTTCAGGCCCTGGGAGATGGCGACTTCGT
LVRM1_0182_G01.b : GCGGATTATGACCCGACTGGGGAAACCTGTGCTTCAGGCCCTGGGAGATGGCGACTTCGT
LVRM1_0110_E12.b : GCGGATTATGACCCGACTGGGGAAACCTGTGCTTCAGGCCCTGGGAGATGGCGACTTCGN
KDN01_0073_E07.b : GCGGATTATGACCCGACTGGGGAAACCTGTGCTTCAGGCCCTGGGAGATGGCGACTTCGT
20110601C-004515 : CAAGTGTCTACACTCCGTGGGCCAACCTCTGACTGGGCAAGGTAAGCACTTGCTCTGCCC
---------+---------+---------+---------+---------+---------+ 780
LVRM1_0039_C12.b : CAAGTGTCTACACTCCGTGG
LVRM1_0182_G01.b : CAgtg
LVRM1_0110_E12.b : TCAGTGTCTACACTCCGTGGgcccac
KDN01_0073_E07.b : CAAGTGTCTACACTCCGTGGGCCAACCTCTGACTGGGCAAGGTAAGCACTTGCTCTGCCC
20110601C-004515 : AGGGGAAGACACAGGCCTGTGTGCCCTCAGAGGGGACCCCTAATCCTACCCATATTATTG
---------+---------+---------+---------+---------+---------+ 840
LVRM1_0039_C12.b :
LVRM1_0182_G01.b :
LVRM1_0110_E12.b :
KDN01_0073_E07.b : AGGGGAAGACACAGGCCTGTGTGCCCTCAGAGGGGACCCCTAATCCTACCCATATTATTG
20110601C-004515 : GTGAGACACCTAATCCCCCAGATCTAGGGCAGCAGCCTGGGCTGGGGGTGAGGCTGCGTT
---------+---------+---------+---------+---------+---------+ 900
LVRM1_0039_C12.b :
LVRM1_0182_G01.b :
LVRM1_0110_E12.b :
KDN01_0073_E07.b : GTGAGACACCTAATCCCCCAGATCTAGGGCAGCAGCCTGGGCTGGGGGTGAGGCTGCGTT
20110601C-004515 : GGCAGAGCAGCTTTATGCAGATTGAGAAGAACTGGAATTCCTGTCGTGGCTCAGTGGTAA
---------+---------+---------+---------+---------+---------+ 960
LVRM1_0039_C12.b :
LVRM1_0182_G01.b :
LVRM1_0110_E12.b :
KDN01_0073_E07.b : GGCAGAGCAGCTTTATGCAGATTGAGAAGAACTggaattcctgtcgtggctcagtggtaa
20110601C-004515 : GGAACCTGACTAGAATCCATGAGGACGTGAGTTCGATCCCCGACCTCGCTCATTGGGTTA
---------+---------+---------+---------+---------+---------+ 1020
LVRM1_0039_C12.b :
LVRM1_0182_G01.b :
LVRM1_0110_E12.b :
KDN01_0073_E07.b : ggaacctgactagaatccatgaggacgtgagttcgatccccgacctcgctcattgggtta
20110601C-004515 : AGGATCTGGGCGTGCTGTCTCTATGGTATTGGCCGGCAGCTATAGCTCCGATTTGACCCC
---------+---------+---------+---------+---------+---------+ 1080
LVRM1_0039_C12.b :
LVRM1_0182_G01.b :
LVRM1_0110_E12.b :
KDN01_0073_E07.b : aggatctgggcgtgctgtctctatggtattggccggcagctatagctccgatttgacccc
20110601C-004515 : TACCCTGGAACATCTTTATGCTGCATGTGAGGCCCTAAAAAAAAAAAAAAAAAAG.....
---------+---------+---------+---------+---------+---------+ 1135
LVRM1_0039_C12.b :
LVRM1_0182_G01.b :
LVRM1_0110_E12.b :
KDN01_0073_E07.b : taccctggaacatctttatgctgcatgtgaggccctaaaaaaaaaaaaaaaaaaGcxxxx
20110601C-004515 : ............................................................
---------+---------+---------+---------+---------+---------+ 1135
LVRM1_0039_C12.b :
LVRM1_0182_G01.b :
LVRM1_0110_E12.b :
KDN01_0073_E07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-004515 : ............................................................
---------+---------+---------+---------+---------+---------+ 1135
LVRM1_0039_C12.b :
LVRM1_0182_G01.b :
LVRM1_0110_E12.b :
KDN01_0073_E07.b : xxxxxxxxxxxxxxxxxxxxxxxxxgtgtgtgtaactgnttattgccccttaagggtaca
20110601C-004515 : ............................................................
---------+---------+---------+---------+---------+---------+ 1135
LVRM1_0039_C12.b :
LVRM1_0182_G01.b :
LVRM1_0110_E12.b :
KDN01_0073_E07.b : aataagcaaacctccaaatcccaaaaaaccctttttccgcgatcaatggtggtggcaacc
20110601C-004515 : ............................................................
---------+---------+---------+---------+---------+---------+ 1135
LVRM1_0039_C12.b :
LVRM1_0182_G01.b :
LVRM1_0110_E12.b :
KDN01_0073_E07.b : cccaggatttaatgttgggatcccggaacagccaataatccctcccntccaccacaaacg
20110601C-004515 : ............................................................
---------+---------+---------+---------+---------+---------+ 1135
LVRM1_0039_C12.b :
LVRM1_0182_G01.b :
LVRM1_0110_E12.b :
KDN01_0073_E07.b : gggcgcggntgggtgggggagtttcctctcagggtatacttttccaaccgggtccgcaaa
20110601C-004515 : ............................................................
---------+---------+---------+---------+---------+---------+ 1135
LVRM1_0039_C12.b :
LVRM1_0182_G01.b :
LVRM1_0110_E12.b :
KDN01_0073_E07.b : attgttaagcccaggccccaaaaccctttg