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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-008140

Length: 1,036

Sequence [FASTA format sequence]
CGGACGCAGG CAGGGGGGGT CAGGGCACGC GGGCTGCCTG CGCTGGCGCG CCGACCTAGC
TACGCTGTCT CTGCCGCTGC TGCAGCCACT GCCGTTGCGG GCTGCTCGAG GGCCTGGCTT
GTGAGGGTGC TCGGGGCCAG GTGTGTCCGC CCAGCTTCAG GTTCACCTGT CACCATGAAG
CCGCTGCACC CAGCTCTCCC TCACCTCTTC CTGCTGACTC TACTCAGCAT ATGCATAGCT
GTTCCCGAGG CGCGCGCTGT GTCCACCGGG ATGCCTGCCA TCAGCGCAGC CTCTTTCCTG
CAGGACCTCA TGCACCGTTA CGGGGAAGGT GACAGCCTCA GCCTGCAGCA GCTCAAGACC
CTGCTCAACC GCCTCAATGT GGGAGTGAGC CGGGCCAACG TCTCCCAGTC TGTGCAAGAA
CAGAGGAACC TCTCAACGTG CTTCAGTTCT GGAGACCTCT TCGCTGCCCA CAACCTCAGC
GACCATTCTC GAATTAGAGG ACCTGAGTTC CAGGAGTTCT GCCCCACCAT CCTCCAGCAG
CTCGATTCCC AGGCCTGCTC CTCTAAGAAC CAAGAGAACG AGGAGAACAA GAAGACGGAA
GAGGGGAGGC CCAGCTCAGT TGAAGTGTGG GGCTTTGGTT TCCTCAGTGT CTCACTGATT
AACCTGGCCT CTCTCCTGGG AGTCCTCGTC CTGCCGTGCA CAGAGAAAGC ATTTTTCAGC
CGTGTGCTCA CTTACTTCAT CGCCCTGTCC ATTGGAACGC TGCTCTCTAA TGCGCTCTTC
CAGCTCATCC CAGAGGTGCA GTAGAATAGA ACCCTGCGCG TCCTCTCTCC CCGGGGCGCC
CCCGCCCCCA CCCTGTGCTC AAGGCACCTG ACAGCTGCCA CCTGAAACAT TAACCTTTCC
CTCATGTCAA GGGACGCCAA TGACTTCTGC CTCTGGATCT CAAGGGCTCC TTTTGTTCCT
GGGGCACCCA GTTTGCCTCT GGCCTCTTTC AGGGATGTCN AGTGCAAGGT GCTTAACATT
TGCCCCCTGT CTCGGG


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSLC39A14zinc transporter ZIP14 isoform b [Homo sapiens]. 2793e-75O
Contig/Assembly ProteinSLC39A14zinc transporter ZIP14 isoform a [Homo sapiens]. 2449e-65O
Contig/Assembly ProteinSLC39A14zinc transporter ZIP14 isoform c [Homo sapiens]. 2449e-65O
Contig/Assembly ProteinSLC39A14zinc transporter ZIP14 isoform a [Homo sapiens]. 2449e-65O
Contig/Assembly ProteinSLC39A8zinc transporter ZIP8 isoform b [Homo sapiens]. 1272e-29O
Contig/Assembly ProteinSLC39A8zinc transporter ZIP8 isoform a [Homo sapiens]. 1272e-29O
Contig/Assembly ProteinSLC39A8zinc transporter ZIP8 isoform a [Homo sapiens]. 1272e-29O
Contig/Assembly ProteinSLC39A8zinc transporter ZIP8 isoform c [Homo sapiens]. 1133e-25O
Contig/Assembly ProteinSLC39A6zinc transporter ZIP6 isoform 1 [Homo sapiens]. 75.96e-14
Contig/Assembly ProteinSLC39A6zinc transporter ZIP6 isoform 2 [Homo sapiens]. 64.71e-10O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSlc39a14zinc transporter ZIP14 isoform a [Mus musculus]. 2631e-70O
Contig/Assembly ProteinSlc39a14zinc transporter ZIP14 isoform a [Mus musculus]. 2631e-70O
Contig/Assembly ProteinSlc39a14zinc transporter ZIP14 isoform b [Mus musculus]. 2302e-60O
Contig/Assembly ProteinSlc39a8zinc transporter ZIP8 [Mus musculus]. 1318e-31O
Contig/Assembly ProteinSlc39a8zinc transporter ZIP8 [Mus musculus]. 1318e-31O
Contig/Assembly ProteinSlc39a8zinc transporter ZIP8 [Mus musculus]. 1318e-31O
Contig/Assembly ProteinSlc39a6zinc transporter ZIP6 precursor [Mus musculus]. 827e-16
Contig/Assembly ProteinSlc39a10zinc transporter ZIP10 precursor [Mus musculus]. 60.82e-09
Contig/Assembly ProteinSlc39a12zinc transporter ZIP12 [Mus musculus]. 57.81e-08
Contig/Assembly ProteinSlc39a4zinc transporter ZIP4 precursor [Mus musculus]. 54.32e-07


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC486124PREDICTED: similar to solute carrier family 39 (zinc transporter), member 14 isoform 1 [Canis familiaris]. 2815e-76O
Contig/Assembly ProteinLOC486124PREDICTED: similar to solute carrier family 39 (zinc transporter), member 14 isoform 3 [Canis familiaris]. 2471e-65O
Contig/Assembly ProteinLOC478494PREDICTED: similar to solute carrier family 39 (zinc transporter), member 8 [Canis familiaris]. 1242e-28
Contig/Assembly ProteinLIV-1PREDICTED: similar to solute carrier family 39 (zinc transporter), member 6 [Canis familiaris]. 78.21e-14
Contig/Assembly ProteinLOC477989PREDICTED: similar to solute carrier family 39 (zinc transporter), member 12 isoform 2 [Canis familiaris]. 61.61e-09
Contig/Assembly ProteinLOC477989PREDICTED: similar to solute carrier family 39 (zinc transporter), member 12 isoform 1 [Canis familiaris]. 61.61e-09
Contig/Assembly ProteinLOC478850PREDICTED: similar to solute carrier family 39 (zinc transporter), member 10 [Canis familiaris]. 60.82e-09O
Contig/Assembly ProteinLOC482096PREDICTED: similar to solute carrier family 39 (zinc transporter), member 4 isoform 2 [Canis familiaris]. 58.51e-08


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSLC39A14zinc transporter ZIP14 precursor [Bos taurus]. 2549e-68O
Contig/Assembly ProteinSLC39A8zinc transporter ZIP8 [Bos taurus]. 1263e-29O
Contig/Assembly ProteinSLC39A8PREDICTED: solute carrier family 39, member 4-like, partial [Bos taurus]. 1141e-25O
Contig/Assembly ProteinSLC39A6zinc transporter ZIP6 [Bos taurus]. 64.32e-10O
Contig/Assembly ProteinSLC39A10zinc transporter ZIP10 [Bos taurus]. 62.46e-10
Contig/Assembly ProteinSLC39A10PREDICTED: solute carrier family 39, member 4-like [Bos taurus]. 62.46e-10
Contig/Assembly ProteinSLC39A12zinc transporter ZIP12 [Bos taurus]. 60.52e-09
Contig/Assembly ProteinSLC39A4zinc transporter ZIP4 precursor [Bos taurus]. 58.97e-09


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinSLC39A14PREDICTED: zinc transporter ZIP14 [Sus scrofa]. 3054e-83O
Contig/Assembly ProteinLOC100524695PREDICTED: zinc transporter ZIP8-like [Sus scrofa]. 1153e-26O
Contig/Assembly ProteinLOC100621425PREDICTED: zinc transporter ZIP6-like [Sus scrofa]. 66.23e-11O
Contig/Assembly ProteinLOC100156896PREDICTED: zinc transporter ZIP4-like [Sus scrofa]. 60.12e-09
Contig/Assembly ProteinSLC39A12PREDICTED: zinc transporter ZIP12 isoform 2 [Sus scrofa]. 57.41e-08
Contig/Assembly ProteinSLC39A12PREDICTED: zinc transporter ZIP12 isoform 1 [Sus scrofa]. 57.41e-08


Assembly Members: 5      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
CLNT10049G01CLNT1_0049_G01.bFS660958 
CLNT10096A05CLNT1_0096_A05.bFS663989 AK391180
CLNT10096C08CLNT1_0096_C08.bFS664009 
CLNT10141G10CLNT1_0141_G10.bHX222336 
LVRM10197D05LVRM1_0197_D05.bCJ006758 

  

SNPs: 2      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
188A200.500W-
G200.500
281C200.400WNACC/T
T210.600ATC/I


Alignment:      TOP

20110601C-008140 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
CLNT1_0096_C08.b : nggacccttcagctgtcgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0096_A05.b : ncctttttnngggacccgttcgcgttcgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0141_G10.b : nnttccgtcagctgtggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0049_G01.b :
LVRM1_0197_D05.b :
20110601C-008140 : .......................CGGACGCAGGCAGGGGGGGTCAGGGCACGCGGGCTGC
---------+---------+---------+---------+---------+---------+ 37
CLNT1_0096_C08.b : xxxxxxxxxxxxxxxxxxxxxxxCGGACGCAGGCAGGGGGGGTCAGGGCACGCGGGCTGC
CLNT1_0096_A05.b : xxxxxxxxxxxxxxxxxxxxxxxCGGACGCAGGCAGGGGGGGTCAGGGCACGCGGGCTGC
CLNT1_0141_G10.b : xxxxxxxxxxxxxxxxxxxxcgaCGGACGCAGGCAGGGGGGGTCAGGGCACGCGGGCTGC
CLNT1_0049_G01.b : nccctatttnnggcctccgttagcgnacgagtgxxxxxxxxxxxxxxxxxxxxxxxxxxx
LVRM1_0197_D05.b :
20110601C-008140 : CTGCGCTGGCGCGCCGACCTAGCTACGCTGTCTCTGCCGCTGCTGCAGCCACTGCCGTTG
---------+---------+---------+---------+---------+---------+ 97
CLNT1_0096_C08.b : CTGCGCTGGCGCGCCGACCTAGCTACGCTGTCTCTGCCGCTGCTGCAGCCACTGCCGTTG
CLNT1_0096_A05.b : CTGCGCTGGCGCGCCGACCTAGCTACGCTGTCTCTGCCGCTGCTGCAGCCACTGCCGTTG
CLNT1_0141_G10.b : CTGCGCTGGCGCGCCGACCTAGCTACGCTGTCTCTGCCGCTGCTGCAGCCACTGCCGTTG
CLNT1_0049_G01.b : xxxxxxxxxxxxxxxxxxxxxxxxxCGCTGTCTCTGCCGCTGCTGCAGCCACTGCCGTTG
LVRM1_0197_D05.b :
20110601C-008140 : CGGGCTGCTCGAGGGCCTGGCTTGTGAGGGTGCTCGGGGCCAGGTGTGTCCGCCCAGCTT
---------+---------+---------+---------+---------+---------+ 157
CLNT1_0096_C08.b : CGGGCTGCTCGAGGGCCTGGCTTGTGAGGGTGCTCGGGGCCAGGTGTGTCCGCCCAGCTT
CLNT1_0096_A05.b : CGGGCTGCTCGAGGGCCTGGCTTGTGAGGGTGCTCGGGGCCAGGTGTGTCCGCCCAGCTT
CLNT1_0141_G10.b : CGGGCTGCTCGAGGGCCTGGCTTGTGAGGGTGCTCGGGGCCAGGTGTGTCCGCCCAGCTT
CLNT1_0049_G01.b : CGGGCTGCTCGAGGGCCTGGCTTGTGAGGGTGCTCGGGGCCAGGTGTGTCCGCCCAGCTT
LVRM1_0197_D05.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-008140 : CAGGTTCACCTGTCACCATGAAGCCGCTGCACCCAGCTCTCCCTCACCTCTTCCTGCTGA
---------+---------+---------+---------+---------+---------+ 217
CLNT1_0096_C08.b : CAGGTTCACCTGTCACCATGAAGCCGCTGCGCCCAGCTCTCCCTCACCTCTTCCTGCTGA
CLNT1_0096_A05.b : CAGGTTCACCTGTCACCATGAAGCCGCTGCGCCCAGCTCTCCCTCACCTCTTCCTGCTGA
CLNT1_0141_G10.b : CAGGTTCACCTGTCACCATGAAGCCGCTGCACCCAGCTCTCCCTCACCTCTTCCTGCTGA
CLNT1_0049_G01.b : CAGGTTCACCTGTCACCATGAAGCCGCTGCACCCAGCTCTCCCTCACCTCTTCCTGCTGA
LVRM1_0197_D05.b : xxxxxxxxCCTGTCACCATGAAGCCGCTGCACCCAGCTCTCCCTCACCTCTTCCTGCTGA
20110601C-008140 : CTCTACTCAGCATATGCATAGCTGTTCCCGAGGCGCGCGCTGTGTCCACCGGGATGCCTG
---------+---------+---------+---------+---------+---------+ 277
CLNT1_0096_C08.b : CTCTACTCAGCATATGCATAGCTGTTCCCGAGGCGCGCGCTGTGTCCACCGGGATGCCTG
CLNT1_0096_A05.b : CTCTACTCAGCATATGCATAGCTGTTCCCGAGGCGCGCGCTGTGTCCACCGGGATGCCTG
CLNT1_0141_G10.b : CTCTACTCAGCATATGCATAGCTGTTCCCGAGGCGCGCGCTGTGTCCACCGGGATGCCTG
CLNT1_0049_G01.b : CTCTACTCAGCATATGCATAGCTGTTCCCGAGGCGCGCGCTGTGTCCACCGGGATGCCTG
LVRM1_0197_D05.b : CTCTACTCAGCATATGCATAGCTGTTCCCGAGGCGCGCGCTGTGTCCACCGGGATGCCTG
20110601C-008140 : CCATCAGCGCAGCCTCTTTCCTGCAGGACCTCATGCACCGTTACGGGGAAGGTGACAGCC
---------+---------+---------+---------+---------+---------+ 337
CLNT1_0096_C08.b : CCACCAGCGCAGCCTCTTTCCTGCAGGACCTCATGCACCGTTACGGGGAAGGTGACAGCC
CLNT1_0096_A05.b : CCACCAGCGCAGCCTCTTTCCTGCAGGACCTCATGCACCGTTACGGGGAAGGTGACAGCC
CLNT1_0141_G10.b : CCATCAGCGCAGCCTCTTTCCTGCAGGACCTCATGCACCGTTACGGGGAAGGTGACAGCC
CLNT1_0049_G01.b : CCATCAGCGCAGCCTCTTTCCTGCAGGACCTCATGCACCGTTACGGGGAAGGTGACAGCC
LVRM1_0197_D05.b : CCATCAGCGCAGCCTCTTTCCTGCAGGACCTCATGCACCGTTACGGGGAAGGTGACAGCC
20110601C-008140 : TCAGCCTGCAGCAGCTCAAGACCCTGCTCAACCGCCTCAATGTGGGAGTGAGCCGGGCCA
---------+---------+---------+---------+---------+---------+ 397
CLNT1_0096_C08.b : TCAGCCTGCAGCAGCTCAAGACCCTGCTCAACCGCCTCAATGTGGGAGTGAGCCGGGCCA
CLNT1_0096_A05.b : TCAGCCTGCAGCAGCTCAAGACCCTGCTCAACCGCCTCAATGTGGGAGTGAGCCGGGCCA
CLNT1_0141_G10.b : TCAGCCTGCAGCAGCTCAAGACCCTGCTCAACCGCCTCAATGTGGGAGTGAGCCGGGCCA
CLNT1_0049_G01.b : TCAGCCTGCAGCAGCTCAAGACCCTGCTCAACCGCCTCAATGTGGGAGTGAGCCGGGCCA
LVRM1_0197_D05.b : TCAGCCTGCAGCAGCTCAAGACCCTGCTCAACCGCCTCAATGTGGGAGTGAGCCGGGCCA
20110601C-008140 : ACGTCTCCCAGTCTGTGCAAGAACAGAGGAACCTCTCAACGTGCTTCAGTTCTGGAGACC
---------+---------+---------+---------+---------+---------+ 457
CLNT1_0096_C08.b : ACGTCTCCCAGTCTGTGCAAGAACAGAGGAACCTCTCAACGTGCTTCAGTTCTGGAGACC
CLNT1_0096_A05.b : ACGTCTCCCAGTCTGTGCAAGAACAGAGGAACCTCTCAACGTGCTTCAGTTCTGGAGACC
CLNT1_0141_G10.b : ACGTCTCCCAGTCTGTGCAAGAACAGAGGAACCTCTCAACGTGCTTCAGTTCTGGAGACC
CLNT1_0049_G01.b : ACGTCTCCCAGTCTGTGCAAGAACAGAGGAACCTCTCAACGTGCTTCAGTTCTGGAGACC
LVRM1_0197_D05.b : ACGTCTCCCAGTCTGTGCAAGAACAGAGGAACCTCTCAACGTGCTTCAGTTCTGGAGACC
20110601C-008140 : TCTTCGCTGCCCACAACCTCAGCGACCATTCTCGAATTAGAGGACCTGAGTTCCAGGAGT
---------+---------+---------+---------+---------+---------+ 517
CLNT1_0096_C08.b : TCTTCGCTGCCCACAACCTCAGCGACCATTCTCGAATTAGAGGACCTGAGTTCCAGGAGT
CLNT1_0096_A05.b : TCTTCGCTGCCCACAACCTCAGCGACCATTCTCGAATTAGAGGACCTGAGTTCCAGGAGT
CLNT1_0141_G10.b : TCTTCGCTGCCCACAACCTCAGCGACCATTCTCGAATTAGAGGACCTGAGTTCCAGGAGT
CLNT1_0049_G01.b : TCTTCGCTGCCCACAACCTCAGCGACCATTCTCGAATTAGAGGACCTGAGTTCCAGGAGT
LVRM1_0197_D05.b : TCTTCGCTGCCCACAACCTCAGCGACCATTCTCAAATTAGAGGACCTGAGTTCCAGGAGT
20110601C-008140 : TCTGCCCCACCATCCTCCAGCAGCTCGATTCCCAGGCCTGCTCCTCTAAGAACCAAGAGA
---------+---------+---------+---------+---------+---------+ 577
CLNT1_0096_C08.b : TCTGCCCCACCATCCTCCAGCAGCTCGATTCCCAGGCCTGCTCCTCTAAGAACCAAGAGA
CLNT1_0096_A05.b : TCTGCCCCACCATCCTCCAGCAGCTCGATTCCCAGGCCTGCTCCTCTAAGAACCAAGAGA
CLNT1_0141_G10.b : TCTGCCCCACCATCCTCCAGCAGCTCGATTCCCAGGCCTGCTCCTCTAAGAACCAAGAGA
CLNT1_0049_G01.b : TCTGCCCCACCATCCTCCAGCAGCTCGATTCCCAGGCCTGCTCCTCTAAGAACCAAGAGA
LVRM1_0197_D05.b : TCTGCCCCACCATCCTCCAGCAGCTCGATTCCCAGGCCTGCTCCTCTAAGAACCAAGAGA
20110601C-008140 : ACGAGGAGAACAAGAAGACGGAAGAGGGGAGGCCCAGCTCAGTTGAAGTGTGGGGCTTTG
---------+---------+---------+---------+---------+---------+ 637
CLNT1_0096_C08.b : ACGAGGAGAACAAGAAGACGGAAGAGGGGAGGCCCAGCTCAGTTGAAGTGTGGGGCTTTG
CLNT1_0096_A05.b : ACGAGGAGAACAAGAAGACGGAAGAGGGGAGGCCCAGCTCAGTTGAAGTGTGGGGCTTTG
CLNT1_0141_G10.b : ACGAGGAGAACAAGAAGACGGAAGAGGGGAGGCCCAGCTCAGTTGAAGTGTGGGGCTTTG
CLNT1_0049_G01.b : ACGAGGAGAACAAGAAGACGGAAGAGGGGAGGCCCAGCTCAGTTGAAGTGTGGGGCTTTG
LVRM1_0197_D05.b : ACGAGGAGAACAAGAAGACGGAAGAGGGGAGGCCCAGCTCAGTTGAAGTGTGGGGCTTTG
20110601C-008140 : GTTTCCTCAGTGTCTCACTGATTAACCTGGCCTCTCTCCTGGGAGTCCTCGTCCTGCCGT
---------+---------+---------+---------+---------+---------+ 697
CLNT1_0096_C08.b : GTTTCCTCAGTGTCTCACTGATTAACCTGGCCTCTCTCCTGGGAGTCCTCGTCCTGCCGT
CLNT1_0096_A05.b : GTTTCCTCAGTGTCTCACTGATTAACCTGGCCTCTCTCCTGGGAGTCCTCGTCCTGCCGT
CLNT1_0141_G10.b : GTTTCCTCAGTGTCTCACTGATTAACCTGGCCTCTCTCCTGGGAGTCCTCGTCCTGCCGT
CLNT1_0049_G01.b : GTTTCCTCAGTGTCTCACTGATTAACCTGGCCTCTCTCCTGGGAGTCCTCGTCCTGCCGT
LVRM1_0197_D05.b : GTTTCCTCAGTGTCTCACTGATTAACCTGGCCTCTCTCCTGGGAGTCCTCGTCCTGCCGT
20110601C-008140 : GCACAGAGAAAGCATTTTTCAGCCGTGTGCTCACTTACTTCATCGCCCTGTCCATTGGAA
---------+---------+---------+---------+---------+---------+ 757
CLNT1_0096_C08.b : GCACAGAGAAAGCATTTTTCAGCCGTGTGCTCACTTACTTCATCGCCCTGTCCATTGGAA
CLNT1_0096_A05.b : GCACAGAGAAAGCATTTTTCAGCCGTGTGCTCACTTACTTCATCGCCCTGTCCATTGGAA
CLNT1_0141_G10.b : GCACAGAGAAAGCATTTTTCAGCCGTGTGCTCACTTACTTCATCGCCCTGTCCATTGGAA
CLNT1_0049_G01.b : GCACAGAGAAAGCATTTTTCAGCCGTGTGCTCACTTACTTCATCGCCCTGTCCATTGGAA
LVRM1_0197_D05.b : GCACAGAAAAAGCATTTTTCAGCCGTGTGCCCACTTACTTCCCCGCCCTGTCCATTGGAA
20110601C-008140 : CGCTGCTCTCTAATGCGCTCTTCCAGCTCATCCCAGAGGTGCAG*TAGAATAGAACCCTG
---------+---------+---------+---------+---------+---------+ 816
CLNT1_0096_C08.b : CGCTGCTCTCTAATGCGCTCTTCCAGCTCATCCCAGAGGTGCAG*TAGAATAGAACCCTG
CLNT1_0096_A05.b : CGCTGCTCTCTAATGCGCTCTTCCAGCTCATCCCAGAGGTGCAG*TAGAATAGAACCCTG
CLNT1_0141_G10.b : CGCTGCTCTCTTATGCGCTCTTCCAGCTCATCCCAGAGGTGCAG*TAGAATAGAACCCTG
CLNT1_0049_G01.b : CGCTGCTCTCTAATGCGCTCTTCCAGCTCATCCCAGAGGTGCAG*TAGAATAGAACCCTG
LVRM1_0197_D05.b : CGCTGCTCTCTAATGCGCTCTTCCAGCTCATCCCAGAGGTGCAGATAGATTAGAACCTTG
20110601C-008140 : CGCGTCCTCTCTCCCCGGGGCGCCCCCGCCCCCACCCTGTGCTCAA*GGCACCTGACAGC
---------+---------+---------+---------+---------+---------+ 875
CLNT1_0096_C08.b : CGCGTCCTCTCTccccggggcgcccccgcccccACCCTGTGCTCAAAGGCACCTGACAGC
CLNT1_0096_A05.b : CGCGTCCTCTCTccccggggcgcccccgcccccACC*TGTGCTCAA*GGCACCTGACAGC
CLNT1_0141_G10.b : CGCGTCCTCTCTTcccggggcgcccccggcccccACCTGTGCTCAA*GGCCACTGACAGC
CLNT1_0049_G01.b : CGCGTCCTCTCTccccggggcgcccccgcccccACCCTGTGCTCAAAGGCACCTGACAGC
LVRM1_0197_D05.b : CGCGTCCTCTCTccccggggcgcccccgcccccACCTTGTGCTCAAAGGGACCTGACAGT
20110601C-008140 : TGCCACCTGAAACATTAACCTTTCCCTCATGTCAAGGGACGCCAATGACTTCTGCCTCTG
---------+---------+---------+---------+---------+---------+ 935
CLNT1_0096_C08.b : TGCCACCTGAAACATTAACCTTTCCCTCATGTCAAGGGACGCCAATGACTTCTGCCTCTG
CLNT1_0096_A05.b : TGCCACTG**AAACATAACCCTTTCCTCCTGTCAAGGGACGCCAATGACTTCTGCCTCTG
CLNT1_0141_G10.b : TGCCACT*GAAAAATTAACCTTTCCCTCATGTCAAGGGACGCAAATGACTTCGGCCTCTG
CLNT1_0049_G01.b : TGCCACCTGAAACATTAACCTTTTCCTCATGTCAAGGGACGCCAATGACTTCTGCCTCTG
LVRM1_0197_D05.b : TGCCACTTGAAACATTAACCTTTCCttctgg
20110601C-008140 : GATCTCAAGGGCTCCTTTTGTTCCTGGGGCACCCAGTTTGCCTCTGGCCTCTTTCAGGGA
---------+---------+---------+---------+---------+---------+ 995
CLNT1_0096_C08.b : GATCTCAgggctccctttggttcttgggccacaaggttgccttctgcctcctccggggaa
CLNT1_0096_A05.b : GNATCTCAGGGCTCCTTTTGTTCCTGGGcaacaagtttgccctctggcctcttcaggaat
CLNT1_0141_G10.b : GATTTCAAGGGCTCCCTTCGTTTCGGGGGGACCCGGTTTGCCTttggctccttcggggat
CLNT1_0049_G01.b : GATCTCANGGNCTCCNTTTTGTCCTGGGGCACCCAGTTTGCCTCTGGCCTCTTTCAGGGA
LVRM1_0197_D05.b :
20110601C-008140 : TGTCNAGTGCAAGGTGCTTAACATTTGCCCCCTGTCTCGGG...................
---------+---------+---------+---------+---------+---------+ 1036
CLNT1_0096_C08.b : ttcaagtgcaaggggctaacatttgccccctgtctggggaactcagcccccttctccgtc
CLNT1_0096_A05.b : gccagggcaagggcttaacatttgcccctgtctcgggacctaagcctcttcctcggtaat
CLNT1_0141_G10.b : gtaggggcaaggggtttaaatttcccccctgtctggggaactaacccccttccccgtaat
CLNT1_0049_G01.b : TGTCNAGTGCAAGGTGCTTAACATTTGCCCCCTGTCTCGGGacctcagcctcctttctcc
LVRM1_0197_D05.b :
20110601C-008140 : ............................................................
---------+---------+---------+---------+---------+---------+ 1036
CLNT1_0096_C08.b : atgccggttctaaacccagtggcaggtttaaaaggaaacctcccgggggtggctgccctg
CLNT1_0096_A05.b : gctgttctaacccccatgacggttcaaaggaaccctcctggggggggtttcccgcccttg
CLNT1_0141_G10.b : gctgtttaaacccctgggagggttcaagggaaactcccgggggggtttcccccctggcct
CLNT1_0049_G01.b : gtaaatgctgtctaaccccaagtgcagggttcaaaggaaaactgcatggggtggctgtct
LVRM1_0197_D05.b :
20110601C-008140 : ............................................................
---------+---------+---------+---------+---------+---------+ 1036
CLNT1_0096_C08.b : ccttggcccaatgaccctccgttttaaaaccccttgggaataccagggggtgccccgaat
CLNT1_0096_A05.b : nccctagaacccccgtgtttaaaaacccttgggaaatccgggggggccccagaaatgtcc
CLNT1_0141_G10.b : aagaccctttcttttaaaacccgggggaatccgtgggccccaaaatttccccccgtgggg
CLNT1_0049_G01.b : tgcccttggtccatggacccctctcgttctaaaacccctgtggcatatcagggtggcaca
LVRM1_0197_D05.b :
20110601C-008140 : ............................................................
---------+---------+---------+---------+---------+---------+ 1036
CLNT1_0096_C08.b : attccccccccctggggaaaggaaaagtttcccctcaaacttaatgcccgaaaacacctc
CLNT1_0096_A05.b : cctccgggggaaaaaaaagttccctcccacccaatgtccgaaaaacctatctttttttta
CLNT1_0141_G10.b : aaggaagagtccgcggaactaattgcgaaaattcctttttttacggcactcccggggggc
CLNT1_0049_G01.b : agaaaattccccccagtgaggtaaagaaaaaggtacactgccacctaatgcccgaaaaac
LVRM1_0197_D05.b :
20110601C-008140 : ............................................................
---------+---------+---------+---------+---------+---------+ 1036
CLNT1_0096_C08.b : ttttttttgcgggttatcccttggggaacacaccaagagacgccaagaggtctctctca
CLNT1_0096_A05.b : gggaataccctggggaacccaaccaagaaacggcgaagagtctct
CLNT1_0141_G10.b : cccaagagaggggagggttttctccccaataaacaaaatttgtggttatttcccccgaga
CLNT1_0049_G01.b : caccctttttaaaccgcaattcctttgagagacaaccaattaaaagttaaaggggttctt
LVRM1_0197_D05.b :
20110601C-008140 : ............................................................
---------+---------+---------+---------+---------+---------+ 1036
CLNT1_0096_C08.b :
CLNT1_0096_A05.b :
CLNT1_0141_G10.b : acaccccttgaaaaataaaccaggtgtggggca
CLNT1_0049_G01.b : taccccctataaccgaaaatccgagtgggttcattccccccgtaaaacccctccgggtga
LVRM1_0197_D05.b :
20110601C-008140 : ............................................................
---------+---------+---------+---------+---------+---------+ 1036
CLNT1_0096_C08.b :
CLNT1_0096_A05.b :
CLNT1_0141_G10.b :
CLNT1_0049_G01.b : aaatagaccccaacttcgtggggggggaatattcccgaaatatgggcccaaaaaa
LVRM1_0197_D05.b :