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[Overview] [RefSeq] [Assembly & SNP] [Alignment]

Assembly Name:  20110601C-013853

Length: 1,347

Sequence [FASTA format sequence]
TCTTTGGATT GGGAATTTCA TGTGCTTGGT TTAAAGCCCA GATTTAGTTT GAGCAAGAGT
TAATCATGAA GACTGTGAAG GGCTTCTGTG TCTTTTTCGT GCTGCATCTA TGTTTCTTCG
ACTCAGGAAT GACTGGGAAA GTTCTTGTAT GGCCCATGGA TTTTAGTCAC TGGATGAATT
TAAAAGTTAT TCTGGAAGAA CTCCAAGTTC GCGGGCATGA GATAACCATC CTGATGCCTT
CATCAAGCTT TCTGCTTGAT CATGCCAAGC TTCCCTTTAA CGTGGAGATC CTTCAAATTT
CACTAAGCAA AGAAAGCTTC GTGGAAAAGT TGATTGCTGA TCTCTATACA CTCTCTTTTG
AAGTGCCGAA ACTTTTATGG TGGAACAGGC AAGTCAAGAT GACACAAATG CTCAGAGATT
TTTTTTTGAT AACCAGAAGC ATATGTGACA GTGCTGTCAC AAACAAGGAG TTACTCAGCA
GGCTACAGGC AGCAAAGTTT GATGTCTGTA TTGCTGACCC TTTAAGCTTT TGTGGGGAGT
TGGTGGCTGA GCTCCTCAAT ATTCCATTTG TATACTCTTT TCGTTTTTCC GATGGAAATG
TCTTTGAGAG GCTGTGTGCT GGACTTCCTA TGCCTTCCTC ATATGTTCCG AGCAGCACAT
CGGGACTGAC AGATAACATG ACTTTTGTTC AGAGGCTGGA GAATTGGTTA TTGTATGCAG
TGAATGTAGT GATATATACA TATTTTTTAT TTCCAGAATG GGATGAATAT TACAGCAAAG
TTTTAGGAAA ACCCACCACA TTATGTGAGA CTATGGGAAA AGCTGAAATG TGGTTGATTC
GAACCTCCTG GGATTTCGAA TTTCCTCACC CTTCCTTGCC TAATTTTGAA TATGTTGGAG
GACTGCACTG CAAGCCTGCG AAGCCCCTGC CTAAGGAATT AGAAGAGTTT GTTCAAAGCT
CTGGGAAAGA TGGAGTTGTG TTGTTTACTC TGGGGTCAAT GGTCAAAAAC CTCACAGAAG
AAAAGTCTAA TATGATTGCA TCAGCTCTTG CCCAGCTTCC ACAGAAGGTT GTGTGGAAGT
ACACAGGAAA AAAGCCAGAA ACCTTAGGAG ACAACACTCG GCTATATGAA TGGATTCCAC
AGAATGATGT TCTTGGTCAT CCCCAAACCA GGGCTTTTAT CACTCACTGT GGAAACAATG
GCATCTATGA AGCTATATAC CACGGGGTCC CTGTGGTGGG AATCCCCCTG TTTGGTGATC
AGTTTGATAA TATTGCTCGT GTCCAAACTA AAGGGGCTGC TGTTCAATTA GACTTGCTCA
CAATGACGAG TTCTGTACTA CTCAATG


SNP mapping information
SNP IDRel.Chr.Location (cM)


Assembly Overview:      TOP
Change score limit to  


BLAST on RefSeq (Human):      TOP

LocusDefinitionScoreE valueFL
Contig/Assembly ProteinUGT2A2UDP-glucuronosyltransferase 2A2 [Homo sapiens]. 487e-138O
Contig/Assembly ProteinUGT2B15UDP-glucuronosyltransferase 2B15 precursor [Homo sapiens]. 477e-135O
Contig/Assembly ProteinUGT2A1UDP-glucuronosyltransferase 2A1 precursor [Homo sapiens]. 476e-134O
Contig/Assembly ProteinUGT2B4UDP-glucuronosyltransferase 2B4 precursor [Homo sapiens]. 473e-133O
Contig/Assembly ProteinUGT2B17UDP-glucuronosyltransferase 2B17 precursor [Homo sapiens]. 469e-132O
Contig/Assembly ProteinUGT2A3UDP-glucuronosyltransferase 2A3 precursor [Homo sapiens]. 466e-131O
Contig/Assembly ProteinUGT2B7UDP-glucuronosyltransferase 2B7 precursor [Homo sapiens]. 464e-131O
Contig/Assembly ProteinUGT2B10UDP-glucuronosyltransferase 2B10 isoform 1 [Homo sapiens]. 456e-128O
Contig/Assembly ProteinUGT2B11UDP-glucuronosyltransferase 2B11 precursor [Homo sapiens]. 449e-126O
Contig/Assembly ProteinUGT2B28UDP-glucuronosyltransferase 2B28 isoform 1 precursor [Homo sapiens]. 449e-126O


BLAST on RefSeq (Mouse):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinUgt2a2UDP-glucuronosyltransferase 2A2 precursor [Mus musculus]. 478e-135O
Contig/Assembly ProteinUgt2b5UDP-glucuronosyltransferase 2B17 precursor [Mus musculus]. 474e-134O
Contig/Assembly ProteinUgt2a1UDP-glucuronosyltransferase 2A1 precursor [Mus musculus]. 474e-134O
Contig/Assembly ProteinUgt2b38UDP glucuronosyltransferase 2 family, polypeptide B38 [Mus musculus]. 473e-133O
Contig/Assembly ProteinUgt2b1UDP-glucuronosyltransferase 2B4 [Mus musculus]. 466e-131O
Contig/Assembly ProteinUgt2b34UDP-glucuronosyltransferase 2B10 [Mus musculus]. 466e-131O
Contig/Assembly ProteinUgt2a3UDP-glucuronosyltransferase 2A3 precursor [Mus musculus]. 466e-131O
Contig/Assembly ProteinUgt2b36UDP glucuronosyltransferase 2 family, polypeptide B36 [Mus musculus]. 466e-131O
Contig/Assembly ProteinUgt2b35UDP glucuronosyltransferase 2 family, polypeptide B35 [Mus musculus]. 457e-128O
Contig/Assembly ProteinUgt2b37UDP glucuronosyltransferase 2 family, polypeptide B37 [Mus musculus]. 456e-128O


BLAST on RefSeq (Dog):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinUGT2B31UDP-glucuronosyltransferase 2B31 precursor [Canis lupus familiaris]. 480e-135O
Contig/Assembly ProteinLOC608760PREDICTED: similar to UDP-glucuronosyltransferase 2B4 precursor (UDPGT) (Hyodeoxycholic acid) (HLUG25) (UDPGTh-1) isoform 1 [Canis familiaris]. 474e-133O
Contig/Assembly ProteinLOC480777PREDICTED: similar to UDP-glucuronosyltransferase 2B15 precursor (UDPGT) (UDPGTh-3) (HLUG4) isoform 1 [Canis familiaris]. 473e-133O
Contig/Assembly ProteinLOC480777PREDICTED: similar to UDP-glucuronosyltransferase 2B15 precursor (UDPGT) (UDPGTh-3) (HLUG4) isoform 2 [Canis familiaris]. 471e-133O
Contig/Assembly ProteinLOC475163PREDICTED: similar to UDP-glucuronosyltransferase 2A1 precursor, microsomal isoform 3 [Canis familiaris]. 469e-132O
Contig/Assembly ProteinLOC608760PREDICTED: similar to UDP-glucuronosyltransferase 2B4 precursor (UDPGT) (Hyodeoxycholic acid) (HLUG25) (UDPGTh-1) isoform 2 [Canis familiaris]. 469e-132O
Contig/Assembly ProteinLOC480777PREDICTED: similar to UDP-glucuronosyltransferase 2B15 precursor (UDPGT) (UDPGTh-3) (HLUG4) isoform 3 [Canis familiaris]. 468e-132O
Contig/Assembly ProteinLOC475163PREDICTED: similar to UDP glucuronosyltransferase 2 family, polypeptide A3 isoform 4 [Canis familiaris]. 390e-108O
Contig/Assembly ProteinLOC608737PREDICTED: similar to UDP-glucuronosyltransferase 2B4 precursor (UDPGT) (Hyodeoxycholic acid) (HLUG25) (UDPGTh-1) isoform 3 [Canis familiaris]. 385e-107O
Contig/Assembly ProteinLOC608737PREDICTED: similar to UDP glycosyltransferase 2 family, polypeptide B17 isoform 1 [Canis familiaris]. 384e-106O


BLAST on RefSeq (Cattle):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC781988hypothetical protein LOC781988 [Bos taurus]. 7040.0O
Contig/Assembly ProteinLOC526979PREDICTED: UDP glucuronosyltransferase 2 family-like [Bos taurus]. 6730.0O
Contig/Assembly ProteinLOC526979PREDICTED: UDP glucuronosyltransferase 2 family-like [Bos taurus]. 6730.0O
Contig/Assembly ProteinMGC152010UDP glucuronosyltransferase 2 family [Bos taurus]. 6690.0O
Contig/Assembly ProteinLOC530553PREDICTED: UDP glucuronosyltransferase 2 family-like [Bos taurus]. 6650.0O
Contig/Assembly ProteinLOC530553PREDICTED: UDP glucuronosyltransferase 2 family-like [Bos taurus]. 6650.0O
Contig/Assembly ProteinLOC512039PREDICTED: UDP glucuronosyltransferase 2 family, polypeptide B38-like [Bos taurus]. 542e-154O
Contig/Assembly ProteinUGT2B15PREDICTED: UDP glucuronosyltransferase 2 family, polypeptide B17-like isoform 2 [Bos taurus]. 478e-135O
Contig/Assembly ProteinUGT2B15PREDICTED: UDP glucuronosyltransferase 2 family, polypeptide B17-like isoform 1 [Bos taurus]. 478e-135O
Contig/Assembly ProteinUGT2A3UDP-glucuronosyltransferase 2A3 [Bos taurus]. 477e-134O


BLAST on RefSeq (Pig):      TOP
LocusDefinitionScoreE valueFL
Contig/Assembly ProteinLOC100624700PREDICTED: UDP-glucuronosyltransferase 2C1-like [Sus scrofa]. 6970.0O
Contig/Assembly ProteinLOC100515394PREDICTED: UDP-glucuronosyltransferase 2C1-like [Sus scrofa]. 6930.0O
Contig/Assembly ProteinLOC100624990PREDICTED: UDP-glucuronosyltransferase 2C1-like [Sus scrofa]. 6360.0O
Contig/Assembly ProteinLOC100516628PREDICTED: UDP-glucuronosyltransferase 2B18-like [Sus scrofa]. 486e-138O
Contig/Assembly ProteinLOC100514665PREDICTED: UDP-glucuronosyltransferase 2B18-like [Sus scrofa]. 482e-136O
Contig/Assembly ProteinLOC100514063PREDICTED: UDP-glucuronosyltransferase 2B31-like isoform 1 [Sus scrofa]. 478e-135O
Contig/Assembly ProteinUGT2A1PREDICTED: UDP-glucuronosyltransferase 2A1 [Sus scrofa]. 473e-133O
Contig/Assembly ProteinLOC100623255PREDICTED: UDP-glucuronosyltransferase 2B31-like [Sus scrofa]. 465e-131O
Contig/Assembly ProteinLOC100623504PREDICTED: UDP-glucuronosyltransferase 2B31-like [Sus scrofa]. 3532e-97O
Contig/Assembly ProteinLOC100514353PREDICTED: UDP-glucuronosyltransferase 2B17-like isoform 1 [Sus scrofa]. 3201e-87O


Assembly Members: 5      TOP
LibraryPlateLoc.Read NameAccessionFull Seq.
CLNT10011B02CLNT1_0011_B02.bFS657900 
CLNT10146F10CLNT1_0146_F10.bHX222715 
LVR010047E07LVR01_0047_E07.bBP445024 
LVRM10052B10LVRM1_0052_B10.bBP449544 AK232931
LVRM10150E01LVRM1_0150_E01.bBP451442 

  

SNP: 1      TOP
Loc.AlleleIndividualsFreq.TypeAA Change
WesternMeishan
376C020.500BNTCA/S
T200.500TTA/L


Alignment:      TOP

20110601C-013853 : ............................................................
---------+---------+---------+---------+---------+---------+ 0
LVRM1_0052_B10.b : nagttgtcxxxxxxxxxxxxxxxxxxxxxxxxx
LVR01_0047_E07.b : gggtttttttttcgcttggtgaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0011_B02.b : ggaaccgttagctgacgxxxxx
LVRM1_0150_E01.b :
CLNT1_0146_F10.b :
20110601C-013853 : .............................TCTTTGGATTGGGAATTTCATGTGCTTGGTT
---------+---------+---------+---------+---------+---------+ 31
LVRM1_0052_B10.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxTCTTTGGATTGGGAATTTCATGTGCTTGGTT
LVR01_0047_E07.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGGATTGGGAATTTCATGTGCTTGGTT
CLNT1_0011_B02.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTGTGCTTGGTT
LVRM1_0150_E01.b : ccgttgtcxxxxxxxxxxxxxxxxxxxxxxx
CLNT1_0146_F10.b :
20110601C-013853 : TAAAGCCCAGATTTAGTTTGAGCAAGAGTTAATCATGAAGACTGTGAAGGGCTTCTGTGT
---------+---------+---------+---------+---------+---------+ 91
LVRM1_0052_B10.b : TAAAGCCCAGATTTAGTTTGAGCAAGAGTTAATCATGAAGACTGTGAAGGGCTTCTGTGT
LVR01_0047_E07.b : TAAAGCCCAGATTTAGTTTGAGCAAGAGTTAATCATGAAGACTGTGAAGGGCTTCTGTGT
CLNT1_0011_B02.b : TAAAGCCCAGATTTAGTTTGAGCAAGAGTTAATCATGAAGACTGTGAAGGGCTTCTGTGT
LVRM1_0150_E01.b : xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxgATCATGAAGACTGTGAAGGGCTTCTGTGT
CLNT1_0146_F10.b :
20110601C-013853 : CTTTTTCGTGCTGCATCTATGTTTCTTCGACTCAGGAATGACTGGGAAAGTTCTTGTATG
---------+---------+---------+---------+---------+---------+ 151
LVRM1_0052_B10.b : CTTTTTCGTGCTGCATCTATGTTTCTTCGACTCAGGAATGACTGGGAAAGTTCTTGTATG
LVR01_0047_E07.b : CTTTTTCGTGCTGCATCTATGTTTCTTCGACTCAGGAATGACTGGGAAAGTTCTTGTATG
CLNT1_0011_B02.b : CTTTTTCGTGCTGCATCTATGTTTCTTCGACTCAGGAATGACTGGGAAAGTTCTTGTATG
LVRM1_0150_E01.b : CTTTTTCGTGCTGCATCTATGTTTCTTCGACTCAGGAATGACTGGGAAAGTTCTTGTATG
CLNT1_0146_F10.b :
20110601C-013853 : GCCCATGGATTTTAGTCACTGGATGAATTTAAAAGTTATTCTGGAAGAACTCCAAGTTCG
---------+---------+---------+---------+---------+---------+ 211
LVRM1_0052_B10.b : GCCCATGGATTTTAGTCACTGGATGAATTTAAAAGTTATTCTGGAAGAACTCCAAGTTCG
LVR01_0047_E07.b : GCCCATGGATTTTAGTCACTGGATGAATTTAAAAGTTATTCTGGAAGAACTCCAAGTTCG
CLNT1_0011_B02.b : GCCCATGGATTTTAGTCACTGGATGAATTTAAAAGTTATTCTGGAAGAACTCCAAGTTCG
LVRM1_0150_E01.b : GCCCATGGATTTTAGTCACTGGATGAATTTAAAAGTTATTCTGGAAGAACTCCAAGTTCG
CLNT1_0146_F10.b :
20110601C-013853 : CGGGCATGAGATAACCATCCTGATGCCTTCATCAAGCTTTCTGCTTGATCATGCCAAGCT
---------+---------+---------+---------+---------+---------+ 271
LVRM1_0052_B10.b : CGGGCATGAGATAACCATCCTGATGCCTTCATCAAGCTTTCTGCTTGATCATGCCAAGCT
LVR01_0047_E07.b : CGGGCATGAGATAACCATCCTGATGCCTTCATCAAGCTTTCTGCTTGATCATGCCAAGCT
CLNT1_0011_B02.b : CGGGCATGAGATAACCATCCTGATGCCTTCATCAAGCTTTCTGCTTGATCATGCCAAGCT
LVRM1_0150_E01.b : CGGGCATGAGATAACCATCCTGATGCCTTCATCAAGCTTTCTGCTTGATCATGCCAAGCT
CLNT1_0146_F10.b :
20110601C-013853 : TCCCTTTAACGTGGAGATCCTTCAAATTTCACTAAGCAAAGAAAGCTTCGTGGAAAAGTT
---------+---------+---------+---------+---------+---------+ 331
LVRM1_0052_B10.b : TCCCTTTAACGTGGAGATCCTTCAAATTTCACTAAGCAAAGAAAGCTTCGTGGAAAAGTT
LVR01_0047_E07.b : TCCCTTTAACGTGGAGATCCTTCAAATTTCACTAAGCAAAGAAAGCTTCGTGGAAAAGTT
CLNT1_0011_B02.b : TCCCTTTAACGTGGAGATCCTTCAAATTTCACTAAGCAAAGAAAGCTTCGTGGAAAAGTT
LVRM1_0150_E01.b : TCCCTTTAACGTGGAGATCCTTCAAATTTCACTAAGCAAAGAAAGCTTCGTGGAAAAGTT
CLNT1_0146_F10.b :
20110601C-013853 : GATTGCTGATCTCTATACACTCTCTTTTGAAGTGCCGAAACTTTTATGGTGGAACAGGCA
---------+---------+---------+---------+---------+---------+ 391
LVRM1_0052_B10.b : GATTGCTGATCTCTATACACTCTCTTTTGAAGTGCCGAAACTTTCATGGTGGAACAGGCA
LVR01_0047_E07.b : GATTGCTGATCTCTATACACTCTCTTTTGAAGTGCCGAAACTTTTATGGTGGAACAGGCA
CLNT1_0011_B02.b : GATTGCTGATCTCTATACACTCTCTTTTGAAGTGCCGAAACTTTTATGGTGGAACAGGCA
LVRM1_0150_E01.b : GATTGCTGATCTCTATACACTCTCTTTTGAAGTGCCGAAACTTTCATGGTGGAACAGGCA
CLNT1_0146_F10.b :
20110601C-013853 : AGTCAAGATGACACAAATGCTCAGAGAT*TTTTTTTTGATAACCAGAAGCATATGTGACA
---------+---------+---------+---------+---------+---------+ 450
LVRM1_0052_B10.b : AGTCAAGATGACACAAATGCTCAGAGATTTTTTTTTTGATAACCAGAAGCATATGTGACA
LVR01_0047_E07.b : AGTCAAGATGACACAAATGCTCAGAGAT*TTTTTTTTGATAACCAGAAGCATATGTGACA
CLNT1_0011_B02.b : AGTCAAGATGACACAAATGCTCAGAGAT*TTTTTTTTGATAACCAGAAGCATATGTGACA
LVRM1_0150_E01.b : AGTCAAGATGACACAAATGCTCAGAGAT*TTTTTTTTGATAACCAGAAGCATATGTGACA
CLNT1_0146_F10.b : nnnnccgtcagcgnaggxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
20110601C-013853 : GTGCTGTCACAAACAAGGAGTTACTCAGCAGGCTACAGGCAGCAAAGTTTGATGTCTGTA
---------+---------+---------+---------+---------+---------+ 510
LVRM1_0052_B10.b : GTGCTGTCACAAACAAGGAGTTACTCAGCAGGCTACAGGCAGCAAAGTTTGATGTCTGTA
LVR01_0047_E07.b : GTGCTGTCACAAACAAGGAGTTACTCAGCAGGCTACAGGCAGCAAAGTTTGATGTCTGTA
CLNT1_0011_B02.b : GTGCTGTCACAAACAAGGAGTTACTCAGCAGGCTACAGGCAGCAAAGTTTGATGTCTGTA
LVRM1_0150_E01.b : GTGCTGTCACAAACAAGGAGTTACTCAGCAGGCTACAGGCAGCAAAGTTTGATGTCTGTA
CLNT1_0146_F10.b : xxxxxxxxxxxxxxxxxgagcTACTCAGCAGGCTACAGGCAGCAAAGTTTGATGTCTGTA
20110601C-013853 : TTGCTGACCCTTTAAGCTTTTGTGGGGAGTTGGTGGCTGAGCTCCTCAATATTCCATTTG
---------+---------+---------+---------+---------+---------+ 570
LVRM1_0052_B10.b : TTGCTGACCCTTTAAGCTTTTGTGGGGAGTTGGTGGCTGAGCTCCTNCATATTCCATTTG
LVR01_0047_E07.b : TTGCTGACCCTTTAAGCTTTTGTGGGGAGTTGGTGGCTGAGCTCCTCAATATTCCATTTG
CLNT1_0011_B02.b : TTGCTGACCCTTTAAGCTTTTGTGGGGAGTTGGTGGCTGAGCTCCTCAATATTCCATTTG
LVRM1_0150_E01.b : TTGCTGACCCTTTAAGCTTTTGTGGGGAGTTGGTGGCTGAGCTCCTCAATATTCCATTTG
CLNT1_0146_F10.b : TTGCTGACCCTTTAAGCTTTTGTGGGGAGTTGGTGGCTGAGCTCCTCAATATTCCATTTG
20110601C-013853 : TATACTCTTTTCGTTTTTCCGATGGAAATGTCTTTGAGAGGCTGTGTGCTGGACTTCCTA
---------+---------+---------+---------+---------+---------+ 630
LVRM1_0052_B10.b : TATACTCTTTTCGTTTTTCCGATGGAAATGTCTTTGAGAGGCTGTGTGCTGGACTTCCTA
LVR01_0047_E07.b : TATACTCTTTTCGTTTTTCCGATGGAAATGTCTTTGAGAGGCTGTGTGCTGGACTTCCTA
CLNT1_0011_B02.b : TATACTCTTTTCGTTTTTCCGATGGAAATGTCTTTGAGAGGCTGTGTGCTGGACTTCCTA
LVRM1_0150_E01.b : TATACTCTTTTCGTTTTTCCGACAGAAATGTCTTTGAGAGGCTGTGTGCTGGACTTCCTA
CLNT1_0146_F10.b : TATACTCTTTTCGTTTTTCCGATGGAAATGTCTTTGAGAGGCTGTGTGCTGGACTTCCTA
20110601C-013853 : TGCCTTCCTCATATGTTCCGAGCAGCACATCGGGACTGACAGATAACATGACTTTT*GTT
---------+---------+---------+---------+---------+---------+ 689
LVRM1_0052_B10.b : TGCCTTCCTCATATGTTCCGAGCAGCACATCGGGACTGACAGATAACATGACTTTTNGTT
LVR01_0047_E07.b : TGCCTTCCTCATATGTTCCGAGCAGCACATCGGGACTGACAGATAACATGACTTTT*GTT
CLNT1_0011_B02.b : TGCCTTCCTCATATGTTCCGAGCAGCACATCGGGACTGACAGATAACATGACTTTT*GTT
LVRM1_0150_E01.b : TGCCTTCCTCATATGTTCCGAGCAGCACATCGGGACTGACAGATAACATGACTTTT*GTT
CLNT1_0146_F10.b : TGCCTTCCTCATATGTTCCGAGCAGCACATCGGGACTGACAGATAACATGACTTTT*GTT
20110601C-013853 : CAGAGGCTGGAGAATTGGTTATTGTATGCAGTGAATGTAGTGATATATACATATTTTTTA
---------+---------+---------+---------+---------+---------+ 749
LVRM1_0052_B10.b : CAGAGGCTGGAGAATTGGTTATTGTATGCAGTGAATGTAGTGATATATACATATTTTTTA
LVR01_0047_E07.b : CAGAGGCTGGAGAATTGGTTATTGTATGCAGTGAATGTAGTGATATATACATATTTTTTA
CLNT1_0011_B02.b : CAGAGGCTGGAGAATTGGTTATTGTATGCAGTGAATGTAGTGATATATACATATTTTTTA
LVRM1_0150_E01.b : CAGAGGCTGGAGAATTGGTTATTGTATGCAGTGAATGTAGTGATATATACATATTTTTTA
CLNT1_0146_F10.b : CAGAGGCTGGAGAATTGGTTATTGTATGCAGTGAATGTAGTGATATATACATATTTTTTA
20110601C-013853 : TTTCCAGAATGGGATGAATATTACAGCAAAGTTTTAGGAAAACCCACCACATTATGTGAG
---------+---------+---------+---------+---------+---------+ 809
LVRM1_0052_B10.b : TTTCCAGAATGGGATGAATATTACAGCAAAGTTTT
LVR01_0047_E07.b : TTTCCAGAATGGGATGAATATTACAGCAAAGTTTTAGGAAAACCCACCACATTATGTGAG
CLNT1_0011_B02.b : TTTCCAGAATGGGATGAATATTACAGCAAAGTTTTAGGAAAACCCACCACATTATGTGAG
LVRM1_0150_E01.b : TTTCCAGAATGGGATGAATATTACAGCACAGTTTTAGGAAAACCCc
CLNT1_0146_F10.b : TTTCCAGAATGGGATGAATATTACAGCAAAGTTTTAGGAAAACCCACCACATTATGTGAG
20110601C-013853 : ACTATGGGAAAAGCTGAAATGTGGTTGATTCGAACCTCCTGGGATTTCGAATTTCCTCAC
---------+---------+---------+---------+---------+---------+ 869
LVRM1_0052_B10.b :
LVR01_0047_E07.b : ACTATGGGAAAAGCTGAAATGTGGTTGATTTCGACCTCCTGGGATTTCGAATTTTCTCAC
CLNT1_0011_B02.b : ACTATGGGAAAAGCTGAAATGTGGTTGATTCGAACCTCCTGGGATTTCGAATTTCCCCTC
LVRM1_0150_E01.b :
CLNT1_0146_F10.b : ACTATGGGAAAAGCTGAAATGTGGTTGATTCGAACCTCCTGGGATTTCGAATTTCCTCAC
20110601C-013853 : CCTTCCTTGCCTAATTTTGAATATGTTGGAGGACTGCACTGCAAGCCTGCGAAGCCCCTG
---------+---------+---------+---------+---------+---------+ 929
LVRM1_0052_B10.b :
LVR01_0047_E07.b : CCTTCCTTGCCTAATTTTGAATATGTTGGAGGACTGCACTGCAAGCCTGCGAAagcccct
CLNT1_0011_B02.b : ACCTTCCTGNNCTATTTTGAATATGTTGGAGGACTGCACTGNCAGCCTGCGAAGCCCCTG
LVRM1_0150_E01.b :
CLNT1_0146_F10.b : CCTTCCTTGCCTAATTTTGAATATGTTGGAGGACTGCACTGCAAGCCTGCGAAGCCCCTG
20110601C-013853 : CCTAAGGAATTAGAAGAGTTTGTTCAAAGCTCTGGGAAAGATGGAGTTGTGTTGTTTACT
---------+---------+---------+---------+---------+---------+ 989
LVRM1_0052_B10.b :
LVR01_0047_E07.b : gcctaaggaattaaaaagagtttggttcaaagcttctggggaaagatggaagttgtggtt
CLNT1_0011_B02.b : gcctaagaatttagagaagtttgttcaagctctgggaaagatggagnntgtgtgttactc
LVRM1_0150_E01.b :
CLNT1_0146_F10.b : CCTAAGGAATTAGAAGAGTTTGTTCAAAGCTCTGGGAAAGATGGAGTTGTGTTGTTTACT
20110601C-013853 : CTGGGGTCAATGGTCAAAAACCTCACAGAAGAAAAGTCTAATATGATTGCATCAGCTCTT
---------+---------+---------+---------+---------+---------+ 1049
LVRM1_0052_B10.b :
LVR01_0047_E07.b : gtttacttcctggggtccaattggtcaaaaaaccttcccaaaaaaaaaaaagtcctaata
CLNT1_0011_B02.b : tggggtcatggtcaaaaactcacagaagaaagtctatatgatgcatcagctcttgccagc
LVRM1_0150_E01.b :
CLNT1_0146_F10.b : CTGGGGTCAATGGTCAAAAACCTCACAGAAGAAAAGTCTAATATGATTGCATCAGCTCTT
20110601C-013853 : GCCCAGCTTCCACAGAAGGTTGTGTGGAAGTACACAGGAAAAAAGCCAGAAACCTTAGGA
---------+---------+---------+---------+---------+---------+ 1109
LVRM1_0052_B10.b :
LVR01_0047_E07.b : ataatttggcattcac
CLNT1_0011_B02.b : ttcaaagaaggtggtggagtactcggaaaaagccgaaacttagaaacaacctcgctattg
LVRM1_0150_E01.b :
CLNT1_0146_F10.b : GCCCAGCTTCCACAGAAGGTTGTGTGGAAGTACACAGGAAAAAAGCCAGAAACCTTAGGA
20110601C-013853 : GACAACACTCGGCTATATGAATGGATTCCACAGAATGATGTTCTTGGTCATCCCCAAACC
---------+---------+---------+---------+---------+---------+ 1169
LVRM1_0052_B10.b :
LVR01_0047_E07.b :
CLNT1_0011_B02.b : atggatccaaaatgatgtcctggcatcccaaccaggctttttcctcctgggaacatggct
LVRM1_0150_E01.b :
CLNT1_0146_F10.b : GACAACACTCGGCTATATGAATGGATTCCACAGAATGATGTTCTTGGTCATCCCCAAACC
20110601C-013853 : AGGGCTTTTATCACTCACTGTGGAAACAATGGCATCTATGAAGCTATATACCACGGGGTC
---------+---------+---------+---------+---------+---------+ 1229
LVRM1_0052_B10.b :
LVR01_0047_E07.b :
CLNT1_0011_B02.b : ctttaacttaacacgggtctggggggaaacccggtggggacattaaaattgccggccacc
LVRM1_0150_E01.b :
CLNT1_0146_F10.b : AGGGCTTTTATCACTCACTGTGGAAACAATGGCATCTATGAAGCTATATACCACGGGGTC
20110601C-013853 : CCTGTGGTGGGAATCCCCCTGTTTGGTGATCAGTTTGATAATATTGCTCGTGTCCAAACT
---------+---------+---------+---------+---------+---------+ 1289
LVRM1_0052_B10.b :
LVR01_0047_E07.b :
CLNT1_0011_B02.b : aagggggtggtcttaattgcaaagaaattgcctaccggtttggggcttaacccctctaga
LVRM1_0150_E01.b :
CLNT1_0146_F10.b : CCTGTGGTGGGAATCCCCCTGTTTGGTGATCAGTTTGATAATATTGCTCGTGTCCAAACT
20110601C-013853 : AAAGGGGCTGCTGTTCAATTAGACTTGCTCACAATGACGAGTTCTGTACTACTCAATG..
---------+---------+---------+---------+---------+---------+ 1347
LVRM1_0052_B10.b :
LVR01_0047_E07.b :
CLNT1_0011_B02.b : agtttattttaattcccccctggccccccgggcttgatttt
LVRM1_0150_E01.b :
CLNT1_0146_F10.b : AAAGGGGCTGCTGTTCAATTAGACTTGCTCACAATGACGAGTTCTGTACTACTCAATGct
20110601C-013853 : ............................................................
---------+---------+---------+---------+---------+---------+ 1347
LVRM1_0052_B10.b :
LVR01_0047_E07.b :
CLNT1_0011_B02.b :
LVRM1_0150_E01.b :
CLNT1_0146_F10.b : ttggaggcacctattaaccatccctccctataatagaatgctatgaagttttcaaaattc
20110601C-013853 : ............................................................
---------+---------+---------+---------+---------+---------+ 1347
LVRM1_0052_B10.b :
LVR01_0047_E07.b :
CLNT1_0011_B02.b :
LVRM1_0150_E01.b :
CLNT1_0146_F10.b : accccatcaacctgtgaagccctggacggggcggcctcctggattgatttgtcatgcccc
20110601C-013853 : ............................................................
---------+---------+---------+---------+---------+---------+ 1347
LVRM1_0052_B10.b :
LVR01_0047_E07.b :
CLNT1_0011_B02.b :
LVRM1_0150_E01.b :
CLNT1_0146_F10.b : aaaaaggaaccaagcacgtggggcagaaacccaaaacctcccctggtcaattaccatcct
20110601C-013853 : ............................................................
---------+---------+---------+---------+---------+---------+ 1347
LVRM1_0052_B10.b :
LVR01_0047_E07.b :
CLNT1_0011_B02.b :
LVRM1_0150_E01.b :
CLNT1_0146_F10.b : ccaagttattgggttccgccggccgttggcaacaattaatttcgggcccaatgggcccgt
20110601C-013853 : ............................................................
---------+---------+---------+---------+---------+---------+ 1347
LVRM1_0052_B10.b :
LVR01_0047_E07.b :
CLNT1_0011_B02.b :
LVRM1_0150_E01.b :
CLNT1_0146_F10.b : ttttttccgaaccttgaaaacccaaagaaaaaaaaaaagtgtttctttttgttgtcccgg
20110601C-013853 : ............................................................
---------+---------+---------+---------+---------+---------+ 1347
LVRM1_0052_B10.b :
LVR01_0047_E07.b :
CLNT1_0011_B02.b :
LVRM1_0150_E01.b :
CLNT1_0146_F10.b : tggctgaaaatataaaatttcttaacttcggcgggaggagaaaatcccccccccttgggg
20110601C-013853 : ............................................................
---------+---------+---------+---------+---------+---------+ 1347
LVRM1_0052_B10.b :
LVR01_0047_E07.b :
CLNT1_0011_B02.b :
LVRM1_0150_E01.b :
CLNT1_0146_F10.b : gcgccctcccttttacagcaaaaaaaacccgcagggcgggttaaaagtaaaacacccgag
20110601C-013853 : ............................................................
---------+---------+---------+---------+---------+---------+ 1347
LVRM1_0052_B10.b :
LVR01_0047_E07.b :
CLNT1_0011_B02.b :
LVRM1_0150_E01.b :
CLNT1_0146_F10.b : agagcaaaacacggggtcccaaaaaaaagctgctcgcggcccaaaataaaac