Animal-Genome cDNA Clone 20030531/20030531C-0/20030531C-000394


Query

>20030531C-000394 (20030531C-000394) 20030531C-000394
CTTGCTGCCT CTTCCGGCTG CTGCGCGAGT CGCCGTCCGA CAGCTGAGCG
TGAGGCGTTT CTGGGGACCC GGTCCAGACG CTGCAAACAT GACGAAGGGC
CTTGTTTTAG GAATCTACAG CAAAGAAAAA GAAGATGATG CACCCCAGTT
TACAAGTGCG GGAGAAAATT TTGATAAATT GGTGTCTGGA AAGCTGAGAG
AAATTTTGAA CATATCCGGA CCACCCCTGA AGGCAGGCAA AACCCGAACC
TTTTACGGTC TGCATGAGGA CTTCTCCAGC GTGGTGGTGG TTGGCCTCGG
CAAAAAGGGA GCCGGAGTTG ATGACCAGGA GAACTGGCAC GAAGGCAAAG
AAAACATCAG AGCCGCTGTC GCAGCCGGGT GCAGACAGAT TCAGGACCTG
GAGATCCCGT CGGTGGAGGT GGACCCCTGC GGAGACGCCC AGGCGGCCGC
GGAAGGAGCG GTGCTCGGGC TCTACGAGTA CGACGAGCTG AAGCAGAAAA
AGAAGGTGGT CGTGTCGGCC AAGCTCCATG GAAGTGGGGA TCAGGAGGCC
TGGCAGAGGG GCGTCCTCTT TGCTTCTGGG CAGAACCTGG CACGCCACCT
GATGGAGACG CCTGCCAATG AGATGACGCC AACCAGATTT GCTGAAGTTA
TTGAGAAGAA TCTCAAAAGT GCCAGCAGTA AAACAGACGT CCACATCAGA
CCCAAGTCTT GGATTGAGGA ACAGGAAATG GGATCATTCC TGAGTGTGGC
CAAAGGGTCC GAAGAGCCTC CAGTCTTCCT GGAAATTCAC TACAAAGGCA
GCCCAGACGC AAGTGACCCA CCCCTGGTGT TTGTCGGGAA GGGAATTACC
TTTGACAGTG GCGGCATCTC TATCAAGGCG TCTGCGAACA TGGACCTCAT
GAGGGCGGAC ATGGGCGGAG CTGCCACCAT CTGTTCCACC ATCGTGTCTG
CTGCCAAGCT CGACCTGCCC ATCAACCTCG TCGGTTTGGC CCCTCTTTGT
GAAAACATGC CCAGCGGGAA GGCCAACAAG CCTGGGGATG TCGTTAGAGC
CAAGAACGGG AAGACCATCC AGGTGGACAA CACCGACGCC GAGGGCAGAC
TCATCCTGGC CGACGCGCTC TGCTACGCGC ACACTTTTAA CCCAAAGGTC
ATCATCAATG CCGCCACCCT GACAGGTGCC ATGGATATAG CTTTGGGATC
CGGTGCCACT GGGGTCTTTA CCCATTCTTC CTG

Search to ncbiHGDS database

Query= 20030531C-000394 (20030531C-000394) 20030531C-000394
         (1233 letters)

Database: Homo Sapiens Gene(masked sequence)
           1395 sequences; 2,826,392,627 total letters

Searching...................................................done

                                                                               Score     E
            Sequences producing significant alignments:                        (bits)  Value

Alignment   gi|22061075|ref|NT_007592.10|Hs6_7749 Homo sapiens chromosome 6...   831  0.0
Alignment   gi|22044506|ref|NT_006344.12|Hs4_6501 Homo sapiens chromosome 4...   220  1e-54
Alignment   gi|22045785|ref|NT_023974.12|Hs9_24130 Homo sapiens chromosome ...    42  0.72
Alignment   gi|22045221|ref|NT_017568.10|Hs9_17724 Homo sapiens chromosome ...    42  0.72
Alignment   gi|22047071|ref|NT_023083.6|Hs5_23239 Homo sapiens chromosome 5...    42  0.72
Alignment   gi|22046819|ref|NT_004982.12|Hs1_5139 Homo sapiens chromosome 1...    42  0.72
Alignment   gi|22043234|ref|NT_032977.2|Hs1_33153 Homo sapiens chromosome 1...    42  0.72
Alignment   gi|22047115|ref|NT_008470.12|Hs9_8627 Homo sapiens chromosome 9...    40  2.8
Alignment   gi|22045318|ref|NT_023929.12|Hs9_24085 Homo sapiens chromosome ...    40  2.8
Alignment   gi|22047859|ref|NT_007914.10|Hs7_8071 Homo sapiens chromosome 7...    40  2.8
Alignment   gi|22058028|ref|NT_007299.10|Hs6_7456 Homo sapiens chromosome 6...    40  2.8
Alignment   gi|22056350|ref|NT_033944.2|Hs6_34099 Homo sapiens chromosome 6...    40  2.8
Alignment   gi|22043520|ref|NT_005078.10|Hs2_5235 Homo sapiens chromosome 2...    40  2.8
Alignment   gi|22059679|ref|NT_011044.10|Hs18_11201 Homo sapiens chromosome...    40  2.8
Alignment   gi|22069743|ref|NT_033288.2|Hs16_33464 Homo sapiens chromosome ...    40  2.8
Alignment   gi|22067833|ref|NT_010498.10|Hs16_10655 Homo sapiens chromosome...    40  2.8
Alignment   gi|22041904|ref|NT_029218.8|Hs1_29377 Homo sapiens chromosome 1...    40  2.8
Alignment   gi|22041139|ref|NT_021905.12|Hs1_22061 Homo sapiens chromosome ...    40  2.8


>gi|22061075|ref|NT_007592.10|Hs6_7749 Homo sapiens chromosome 6 reference
                genomic contig
          Length = 48753116

 Score =  831 bits (419), Expect = 0.0
 Identities = 973/1155 (84%), Gaps = 12/1155 (1%)
 Strand = Plus / Plus


Query: 79       cgctgcaaacatgacgaagggccttgttttaggaatctacagcaaagaaaaagaagatga 138
                ||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||
Sbjct: 27444407 cgctgcagacatgacgaagggccttgttttaggaatctattccaaagaaaaagaagatga 27444466


Query: 139      tgcaccccagtttacaagtgcgggagaaaattttgataaattggtgtctggaaagctgag 198
                ||  || ||||| |||||||| ||||| ||| ||||||||||| |  |||||||||||||
Sbjct: 27444467 tgtgccacagttcacaagtgcaggagagaatcttgataaattgatagctggaaagctgag 27444526


Query: 199      agaaattttgaacatatccggaccacccctgaaggcaggcaaaacccgaaccttttacgg 258
                ||| | |||||||||||| |||||||| |||||||||||||| || |||| |||||| ||
Sbjct: 27444527 agagactttgaacatatctggaccacctctgaaggcaggcaagactcgaaacttttatgg 27444586


Query: 259      tctgcatgaggacttctccagcgtggtggtggttggcctcggcaaaaagggagccggagt 318
                ||||||| |||||||| ||||||||||| | ||||||||||||||||||| |||| || |
Sbjct: 27444587 tctgcatcaggacttccccagcgtggtgctagttggcctcggcaaaaaggcagccagaat 27444646


Query: 319      tgatgaccaggagaactggcacgaaggcaaagaaaacatcagagccgctgtcgcagccgg 378
                 || || ||||| |||||||| ||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 27444647 cgacgaacaggaaaactggcaggaaggcaaagaaaacatcagagctgctgttgcagcagg 27444706


Query: 379      gtgcagacagattcaggacctggagatcccgtcggtggaggtggacccctgcggagacgc 438
                 ||||| |||||||| ||||||||| || | || ||||||||||| |||||  |||| ||
Sbjct: 27444707 atgcaggcagattcaagacctggagctctcttccgtggaggtggatccctgtagagatgc 27444766


Query: 439      ccaggcggccgcggaaggagcggtgctcgggctctacgagtacgacgagctgaagcagaa 498
                 ||||| || | ||| || |||||||| || ||||| || ||||| || || ||||| ||
Sbjct: 27444767 tcaggctgctgaggagggcgcggtgcttggtctctatgaatacgatgacctaaagcaaaa 27444826


Query: 499      aaagaaggtggtcgtgtcggccaagctccatggaagtggggatcaggaggcctggcagag 558
                ||||||| |||   ||||||  |||||| |||||| |||||||||||||||||||||||
Sbjct: 27444827 aaagaagatggctatgtcggtgaagctctatggaactggggatcaggaggcctggcagaa 27444886


Query: 559      gggcgtcctctttgcttctgggcagaacctggcacgccacctgatggagacgcctgccaa 618
                 || ||||| |||||||||||||||||| |||||       ||||||||||||| ||||
Sbjct: 27444887 aggagtcctgtttgcttctgggcagaacttggca-------tgatggagacgccagccag 27444939


Query: 619      tgagatgacgccaaccagatttgctgaagttattgagaagaatctcaaaagtgccagcag 678
                 ||||||| ||||||||||||||| ||| |||||||||||||||||||||| || || ||
Sbjct: 27444940 cgagatgatgccaaccagatttgccgaaattattgagaagaatctcaaaagcgctagtag 27444999


Query: 679      taaaacagacgtccacatcagacccaagtcttggattgaggaacaggaaatgggatcatt 738
                | |||| ||  | || |||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 27445000 t-aaaccgagtttcatatcagacccaggtcttggattgaggaacaggcaatgggatcatt 27445058


Query: 739      cctgagtgtggccaaagggtccgaagagcctccagtcttcctggaaattcactacaaagg 798
                ||| |||||||||||||| || || |||||  |||||||| ||||||||||||||| |||
Sbjct: 27445059 cctcagtgtggccaaaggatctgacgagccctcagtcttcttggaaattcactacatagg 27445118


Query: 799      cagcccagacgcaagtgacccacccctggtgtttgtcgggaagggaattacctttgacag 858
                ||||||  | |||    | ||||||||  ||||||| ||||| |||||||||||||||||
Sbjct: 27445119 cagccccaatgcagacaaaccacccct--tgtttgttgggaaaggaattacctttgacag 27445176


Query: 859      tggcggcatctctatcaaggcgtctgcgaacatggacctcatgagggcggacatgggcgg 918
                ||| || ||||| |||||||| ||||| || ||||||||||||||||| |||||||| ||
Sbjct: 27445177 tggtggtatctccatcaaggcttctgcaaatatggacctcatgagggccgacatgggagg 27445236


Query: 919      agctgccaccatctgttccaccatcgtgtctgctgccaagctcgacctgcccatcaacct 978
                |||| | || || || ||  |||| ||||||||||| || |||    ||||||| ||  |
Sbjct: 27445237 agctacaactatatgctcagccattgtgtctgctgcaaatctcagtttgcccattaatat 27445296


Query: 979      cgtcggtttggcccctctttgtgaaaacatgcccagcgggaaggccaacaagcctgggga 1038
                  | ||| |||||||||  |||||||||||||||||||| |||||||||||||  |||||
Sbjct: 27445297 tataggtctggcccctc--tgtgaaaacatgcccagcggcaaggccaacaagctggggga 27445354


Query: 1039     tgtcgttagagccaagaacgggaagaccatccaggtggacaacaccgacgccgagggcag 1098
                ||| |||||||||| |||| |||||||||||||||| |  ||||| || || ||||| ||
Sbjct: 27445355 tgttgttagagccaggaacaggaagaccatccaggttggtaacactgatgctgaggggag 27445414


Query: 1099     actcatcctggccgacgcgctctgctacgcgcacacttttaacccaaaggtcatcatcaa 1158
                 ||||| ||||| || |||||||| |||| |||||| |||||||| ||||||||| ||||
Sbjct: 27445415 gctcatactggctgatgcgctctgttacgtgcacacatttaacccgaaggtcatcctcaa 27445474


Query: 1159     tgccgccaccctgacaggtgccatggatatagctttgggatccggtgccactggggtctt 1218
                |||| ||||| | ||||||| ||| ||| |||||||||| || |||||||||||||||||
Sbjct: 27445475 tgccaccaccttaacaggtgtcatagatgtagctttggggtcaggtgccactggggtctt 27445534


Query: 1219     tacccattcttcctg 1233
                |||| |||| |||||
Sbjct: 27445535 taccaattcatcctg 27445549



>gi|22044506|ref|NT_006344.12|Hs4_6501 Homo sapiens chromosome 4 reference
               genomic contig
          Length = 7839908

 Score =  220 bits (111), Expect = 1e-54
 Identities = 153/167 (91%)
 Strand = Plus / Plus


Query: 533     agtggggatcaggaggcctggcagaggggcgtcctctttgcttctgggcagaacctggca 592
               |||||||||||||||||||||||||  || ||||| |||||||||||||||||| |||||
Sbjct: 4059440 agtggggatcaggaggcctggcagaaaggagtcctgtttgcttctgggcagaacttggca 4059499


Query: 593     cgccacctgatggagacgcctgccaatgagatgacgccaaccagatttgctgaagttatt 652
               |||||  ||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 4059500 cgccaattgatggagacgccagccaatgagatgacgccaaccagatttgctgaaattatt 4059559


Query: 653     gagaagaatctcaaaagtgccagcagtaaaacagacgtccacatcag 699
               |||||||||||||||||||| || |||||||| || ||||| |||||
Sbjct: 4059560 gagaagaatctcaaaagtgctagtagtaaaaccgaggtccatatcag 4059606


 Score =  200 bits (101), Expect = 1e-48
 Identities = 146/161 (90%)
 Strand = Plus / Plus


Query: 698     agacccaagtcttggattgaggaacaggaaatgggatcattcctgagtgtggccaaaggg 757
               |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 4063287 agacccaagtcttggattgaggaacaggcaatgggatcattcctcagtgtggccaaagga 4063346


Query: 758     tccgaagagcctccagtcttcctggaaattcactacaaaggcagcccagacgcaagtgac 817
               || || ||||| ||||||||| |||||||||||||||||||||||||  | ||||  ||
Sbjct: 4063347 tctgacgagcccccagtcttcttggaaattcactacaaaggcagccccaatgcaaacgaa 4063406


Query: 818     ccacccctggtgtttgtcgggaagggaattacctttgacag 858
               ||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 4063407 ccacccctggtgtttgttgggaaaggaattacctttgacag 4063447


 Score =  135 bits (68), Expect = 6e-29
 Identities = 83/88 (94%)
 Strand = Plus / Plus


Query: 987     tggcccctctttgtgaaaacatgcccagcgggaaggccaacaagcctggggatgtcgtta 1046
               ||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||
Sbjct: 4071519 tggcccctctttgtgaaaatatgcccagcggcaaggccaacaagccgggggatgttgtta 4071578


Query: 1047    gagccaagaacgggaagaccatccaggt 1074
               ||||||| ||||||||||||||||||||
Sbjct: 4071579 gagccaaaaacgggaagaccatccaggt 4071606


 Score =  123 bits (62), Expect = 2e-25
 Identities = 104/118 (88%)
 Strand = Plus / Plus


Query: 96      agggccttgttttaggaatctacagcaaagaaaaagaagatgatgcaccccagtttacaa 155
               ||||||||||||||||||||||   ||||||||||||||||||||  || ||||| ||||
Sbjct: 4054292 agggccttgttttaggaatctattccaaagaaaaagaagatgatgtgccacagttcacaa 4054351


Query: 156     gtgcgggagaaaattttgataaattggtgtctggaaagctgagagaaattttgaacat 213
               |||| ||||| ||||||||||||||| |  |||||||||||||||| | |||||||||
Sbjct: 4054352 gtgcaggagagaattttgataaattgttagctggaaagctgagagagactttgaacat 4054409


 Score =  123 bits (62), Expect = 2e-25
 Identities = 134/158 (84%)
 Strand = Plus / Plus


Query: 377     gggtgcagacagattcaggacctggagatcccgtcggtggaggtggacccctgcggagac 436
               |||||||| |||||||| ||||||||| || |||| ||||||||||| ||||| ||||||
Sbjct: 4057955 gggtgcaggcagattcaagacctggagctctcgtctgtggaggtggatccctgtggagac 4058014


Query: 437     gcccaggcggccgcggaaggagcggtgctcgggctctacgagtacgacgagctgaagcag 496
               || ||||| || ||||| ||||||||||| || ||||| || ||||| || || |||||
Sbjct: 4058015 gctcaggctgctgcggagggagcggtgcttggtctctatgaatacgatgacctaaagcaa 4058074


Query: 497     aaaaagaaggtggtcgtgtcggccaagctccatggaag 534
               ||||||||| |||  |||||||| |||||| |||||||
Sbjct: 4058075 aaaaagaagatggctgtgtcggcaaagctctatggaag 4058112


 Score =  111 bits (56), Expect = 9e-22
 Identities = 95/108 (87%)
 Strand = Plus / Plus


Query: 267     aggacttctccagcgtggtggtggttggcctcggcaaaaagggagccggagttgatgacc 326
               |||||||| ||||||||||| | ||||||||||||||||||| ||| ||| | || || |
Sbjct: 4056756 aggacttccccagcgtggtgctagttggcctcggcaaaaaggcagctggaatcgacgaac 4056815


Query: 327     aggagaactggcacgaaggcaaagaaaacatcagagccgctgtcgcag 374
               |||| |||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 4056816 aggaaaactggcatgaaggcaaagaaaacatcagagctgctgttgcag 4056863


 Score = 91.7 bits (46), Expect = 9e-16
 Identities = 58/62 (93%)
 Strand = Plus / Plus


Query: 1172    acaggtgccatggatatagctttgggatccggtgccactggggtctttacccattcttcc 1231
               ||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||| |||
Sbjct: 4079054 acaggtgccatggatgtagctttgggatcaggtgccactggggtctttaccaattcatcc 4079113


Query: 1232    tg 1233
               ||
Sbjct: 4079114 tg 4079115


 Score = 87.7 bits (44), Expect = 1e-14
 Identities = 89/104 (85%)
 Strand = Plus / Plus


Query: 857     agtggcggcatctctatcaaggcgtctgcgaacatggacctcatgagggcggacatgggc 916
               ||||| || ||||| |||||||| ||||| || ||||||||||||||||| ||||||||
Sbjct: 4069878 agtggtggtatctccatcaaggcttctgcaaatatggacctcatgagggctgacatggga 4069937


Query: 917     ggagctgccaccatctgttccaccatcgtgtctgctgccaagct 960
               |||||||| || || || ||  |||||||||||||||| |||||
Sbjct: 4069938 ggagctgcaactatatgctcagccatcgtgtctgctgcaaagct 4069981


 Score = 79.8 bits (40), Expect = 3e-12
 Identities = 91/108 (84%)
 Strand = Plus / Plus


Query: 1070    caggtggacaacaccgacgccgagggcagactcatcctggccgacgcgctctgctacgcg 1129
               ||||| || ||||| || || ||||| || ||||| ||||| || |||||||| |||||
Sbjct: 4072923 caggttgataacactgatgctgaggggaggctcatactggctgatgcgctctgttacgca 4072982


Query: 1130    cacacttttaacccaaaggtcatcatcaatgccgccaccctgacaggt 1177
               ||||| |||||||| ||||||||| |||||||||||||| | ||||||
Sbjct: 4072983 cacacgtttaacccgaaggtcatcctcaatgccgccaccttaacaggt 4073030


 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus


Query: 218     ggaccacccctgaaggcaggcaaaacccgaaccttttacggtctgcat 265
               |||||||| ||||||||||| || || ||||||||||| |||||||||
Sbjct: 4056234 ggaccacctctgaaggcagggaagactcgaaccttttatggtctgcat 4056281


 Score = 50.1 bits (25), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Plus


Query: 1       cttgctgcctcttccggctgctgcgcgagtcgccgtccgac 41
               ||||||||||||||||||||| | |||||| | ||||||||
Sbjct: 4051941 cttgctgcctcttccggctgcggggcgagtagtcgtccgac 4051981



>gi|22045785|ref|NT_023974.12|Hs9_24130 Homo sapiens chromosome 9
              reference genomic contig
          Length = 20138537

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 24/25 (96%)
 Strand = Plus / Plus


Query: 538    ggatcaggaggcctggcagaggggc 562
              |||| ||||||||||||||||||||
Sbjct: 422623 ggataaggaggcctggcagaggggc 422647



>gi|22045221|ref|NT_017568.10|Hs9_17724 Homo sapiens chromosome 9 reference
               genomic contig
          Length = 16078776

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus


Query: 534     gtggggatcaggaggcctggc 554
               |||||||||||||||||||||
Sbjct: 6016284 gtggggatcaggaggcctggc 6016264



>gi|22047071|ref|NT_023083.6|Hs5_23239 Homo sapiens chromosome 5 reference
              genomic contig
          Length = 365356

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 24/25 (96%)
 Strand = Plus / Plus


Query: 105    ttttaggaatctacagcaaagaaaa 129
              |||||||||||||||||| ||||||
Sbjct: 233101 ttttaggaatctacagcacagaaaa 233125



>gi|22046819|ref|NT_004982.12|Hs1_5139 Homo sapiens chromosome 1 reference
               genomic contig
          Length = 2733743

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus


Query: 533     agtggggatcaggaggcctgg 553
               |||||||||||||||||||||
Sbjct: 2018778 agtggggatcaggaggcctgg 2018758



>gi|22043234|ref|NT_032977.2|Hs1_33153 Homo sapiens chromosome 1 reference
               genomic contig
          Length = 4568944

 Score = 42.1 bits (21), Expect = 0.72
 Identities = 21/21 (100%)
 Strand = Plus / Minus


Query: 162     gagaaaattttgataaattgg 182
               |||||||||||||||||||||
Sbjct: 1001397 gagaaaattttgataaattgg 1001377



>gi|22047115|ref|NT_008470.12|Hs9_8627 Homo sapiens chromosome 9 reference
               genomic contig
          Length = 9268166

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus


Query: 164     gaaaattttgataaattggtgtct 187
               |||||||||||||| |||||||||
Sbjct: 4664721 gaaaattttgataatttggtgtct 4664698



>gi|22045318|ref|NT_023929.12|Hs9_24085 Homo sapiens chromosome 9
              reference genomic contig
          Length = 563316

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus


Query: 689    gtccacatcagacccaagtc 708
              ||||||||||||||||||||
Sbjct: 491638 gtccacatcagacccaagtc 491657



>gi|22047859|ref|NT_007914.10|Hs7_8071 Homo sapiens chromosome 7 reference
               genomic contig
          Length = 14804752

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus


Query: 185     tctggaaagctgagagaaat 204
               ||||||||||||||||||||
Sbjct: 2853734 tctggaaagctgagagaaat 2853715



>gi|22058028|ref|NT_007299.10|Hs6_7456 Homo sapiens chromosome 6 reference
               genomic contig
          Length = 12331746

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus


Query: 1138    taacccaaaggtcatcatcaatgc 1161
               ||||||||||||||||| ||||||
Sbjct: 1609727 taacccaaaggtcatcaccaatgc 1609704



>gi|22056350|ref|NT_033944.2|Hs6_34099 Homo sapiens chromosome 6 reference
                genomic contig
          Length = 19894959

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus


Query: 163      agaaaattttgataaattgg 182
                ||||||||||||||||||||
Sbjct: 10273102 agaaaattttgataaattgg 10273121



>gi|22043520|ref|NT_005078.10|Hs2_5235 Homo sapiens chromosome 2
            reference genomic contig
          Length = 2555680

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus


Query: 714  ttgaggaacaggaaatggga 733
            ||||||||||||||||||||
Sbjct: 4382 ttgaggaacaggaaatggga 4363



>gi|22059679|ref|NT_011044.10|Hs18_11201 Homo sapiens chromosome 18
               reference genomic contig
          Length = 6356383

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus


Query: 485     gagctgaagcagaaaaagaa 504
               ||||||||||||||||||||
Sbjct: 5255190 gagctgaagcagaaaaagaa 5255209



>gi|22069743|ref|NT_033288.2|Hs16_33464 Homo sapiens chromosome 16
              reference genomic contig
          Length = 1587798

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus


Query: 826    ggtgtttgtcgggaagggaa 845
              ||||||||||||||||||||
Sbjct: 662251 ggtgtttgtcgggaagggaa 662232



>gi|22067833|ref|NT_010498.10|Hs16_10655 Homo sapiens chromosome 16
               reference genomic contig
          Length = 5484103

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus


Query: 110     ggaatctacagcaaagaaaa 129
               ||||||||||||||||||||
Sbjct: 4002429 ggaatctacagcaaagaaaa 4002448



>gi|22041904|ref|NT_029218.8|Hs1_29377 Homo sapiens chromosome 1 reference
              genomic contig
          Length = 851266

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus


Query: 518    gccaagctccatggaagtgg 537
              ||||||||||||||||||||
Sbjct: 379175 gccaagctccatggaagtgg 379156



>gi|22041139|ref|NT_021905.12|Hs1_22061 Homo sapiens chromosome 1
              reference genomic contig
          Length = 2439946

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus


Query: 163    agaaaattttgataaattgg 182
              ||||||||||||||||||||
Sbjct: 262022 agaaaattttgataaattgg 262003


  Database: Homo Sapiens Gene(masked sequence)
    Posted date:  Nov 13, 2002  9:59 PM
  Number of letters in database: 2,826,392,627
  Number of sequences in database:  1395

Lambda     K      H
    1.37    0.711     1.31

Gapped
Lambda     K      H
    1.37    0.711     1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
length of query: 1233
length of database: 2,826,392,627
effective HSP length: 21
effective length of query: 1212
effective length of database: 2,826,363,332
effective search space: 3425552358384
effective search space used: 3425552358384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)