Animal-Genome cDNA Clone 20030531/20030531C-0/20030531C-003184


Query

>20030531C-003184 (20030531C-003184) 20030531C-003184
CGCGAGCGGC GCGAGGGGAC AGGGCCGCAC GGGTCCCAGG TCCCGGGGTG
GCCTGTGCAC CCAAGTTTCC CTTGCGCCGC GCTTCCTGAT GTGGCCGAAG
ACGTGATTGG AAGCGCCGGC GGCCGCCCGC GGACGATGCT CGGGTTTCTG
GGTGCGACGA CCCTGATGCT GGTCGCTGGG GCTCCGTGGG TGTTGCCCGC
AGGGGGTGCA GATCTCAGAT CTCCTGAAAA TGTCGTGGTC TCTATCATTG
ATGACAACTT CATCCTGAAA TGGAAGAGCA GCAGTGAATC CGTCAGCAAT
GTGACTTTTT CAGCAGATTA TCAAATAACA GGGATGGATA ATTGGATAAA
GTTGCCTGGA TGTCAATATG TTACTAGCAC TGAATGCAAC TTTTCTTCCA
TCAAGCTTAA AAGCGTGTAT GAAAAAATTA AATTGCGTAT AAGAGCAGAA
ACAGGAAACA GCACTTCTCC GTGGTATGAG GTTGAGCCGT TTATACCATT
TCAAGAAGCA CAAATTGGCC CTCCAGATGT ACATTTAGAA GCCGAAGATA
AAGCAATAAT AATAAACCTC TCTCCTCCTG GCACAAAAAA CAGTGTCATG
TGGGCTATGG ATAGTTCAAG TTTCGTGTAT AGCTTAGTAA TCTGGAAAAA
CTCTTCAAGT CTAGAAGAAA GGACTAAAAC TGTTTATGCC AGAGATAAAA
TTCACCAACT CTCACCAGAG ACAACTTACT GTTTAAAAGT TAAAGCCGGA
CTCCGTTCGC CAAGAAAAGT CGGTGTCTAC AGTCCAGTGT ATTGTATAAA
TACCACAGTG AAACATCACC TGCCTTCACC AGAAAATCTA GAAATTAATG
CTGAAAACCG GGTCTATGTT CTTAAATGGA ATTACACCTA TGAAAATGTG
ACTTTTCAAG CTCAGTGGCT CCATGCCTTT TTAAAAAAGA TTCCTGAGGA
CCATTCAGAC AAGTGGAAAC AAATACCAAA CTGTGAAAAT GTCAAAACGA
CCCATTGTGT CTTTCCTCAA AATGTTTTCA CGAAAGGAAT TTTCTTCATC
CGTGTCCAAG CATCTAATGG AAATAGCACA TCTCTTTGGT CCGAAGAGAA
GAGATTTAAT ACTGAAATGC AAACTATCCT GTTTCCTCCC GTCATCAACA
TGAAACCCAT AAATGATGCT TCACTGCGTG TCGGTATCGG TGCTCCGAAA
GAATCTGAGG ACAAGTCTGT GAACCAGCTT TACCCACTAA TTTATGAAGT
TATTTTTAGA GAAAACACTT CAGATACTGA GAGAGACGTT CTAGAGAAGA
GAACGGATTT TACTTTCTCT AACTTGAAAC CACTGACTGT GTATTGTGTC
AAAGCCAGAG CACTCATCGA GAATGACAGG TGGAATAGAA GCAGTGTTTT
TAGTGACACT GTGTGCGAGA AAACCAAACC AGGAAGCACT TCCCAAGCCT
GGCTTATAGC TGGAATTCTC TCGGCGATAC TTTTGTTCCC TGCTGTTTTT
TATGGTGTGA AAGTCGTCTC GCGATGTATC AATTATGTGT TCTTCCCATC
AAGTAAACCT CCTTCCACTA TAGATGAGTA TTTCGCTGAA CAGCCACTCA
AGAATCTGCT TCTCTCCACC TCTGAAGAAC AAACCGAAAT ATGTTTCATC
GTTGAAAATA CAAACACTAT TACTACAATA GAAGAGACTG ATCAAATTGA
TGACAATCAC AGCAGATGCA GTTCTCAAAC GAATCGGGAT TCAGGAGTCT
ATTCGAATGA AGATGAAAAC AGTGGAAGCA AAATAGGAGA AGAAATTCTG
CGACAGGCAG CCGTGTGACC AGAACGCTTT AAAATCTTGG GAAGTCTATG
GAACTTAACA GCAGGAGCCT GAGCTCCTTG CTTCTCTCAG TAACTCTTAA
GAACGTATTT GCTTGTGGCG GAACAAAAAA GCACCTTCAG ATCATCGGTC
CTCAAAATAC AGGCAAGCAC TTAACTCTTT AAAAGGAATC TGGAAAAGAG
TTTGCTGTAT TCTTTTCTGT ATGGAAAGTC TTGGCCAACC TGTCATTGGA
CCGGCCTTGG ATGAGAGGCA TTAAATCCCG AAGATGCCCT CCATCTTCCT
GATGTCACCG CGGGTACCCT GGCACCTCTG GCTGAAGGCT GTGCTTGTGT
CAGCCGGCCG ATAGCCTTGC GGTGCTGCTG CTGATGCCAC GTGTGTCATT
GGTCCCTTCT CCGTCCCAGC GTCACAGTGC ATTATTCCTC CAGAGACACC
CAGAACACTC AGTCTTTTTC TTGAACACTG AAGTGAGCCC TTTGGAAATG
TCTTTAGAAA GGTCTGAATC CCAGCATCAC ATGGTTTTCT GAAAAGTAGC
TCACTCTGGA AAACAGCCGC AGGTGCCAGA AACATGGTCC TTAACGATTT
CAGGGAAATT CTATCCATTT ATCCCAGAAA CATGGTCCTT AACGATTTCA
GGGAAATTCT ATCCATTTAT CCCAATTACA TCA

Search to ncbiHGDS database

Query= 20030531C-003184 (20030531C-003184) 20030531C-003184
         (2483 letters)

Database: Homo Sapiens Gene(masked sequence)
           1395 sequences; 2,826,392,627 total letters

Searching...................................................done

                                                                               Score     E
            Sequences producing significant alignments:                        (bits)  Value

Alignment   gi|22067223|ref|NT_011512.6|Hs21_11669 Homo sapiens chromosome ...   127  3e-26
Alignment   gi|22067527|ref|NT_010478.10|Hs16_10635 Homo sapiens chromosome...    48  0.024
Alignment   gi|22042297|ref|NT_029256.8|Hs3_29415 Homo sapiens chromosome 3...    44  0.37
Alignment   gi|22062703|ref|NT_033241.2|Hs11_33417 Homo sapiens chromosome ...    44  0.37
Alignment   gi|22057594|ref|NT_011772.8|HsX_11929 Homo sapiens chromosome X...    42  1.5
Alignment   gi|22047344|ref|NT_030735.6|Hs8_30991 Homo sapiens chromosome 8...    42  1.5
Alignment   gi|22050628|ref|NT_007933.10|Hs7_8090 Homo sapiens chromosome 7...    42  1.5
Alignment   gi|22052439|ref|NT_006788.10|Hs5_6945 Homo sapiens chromosome 5...    42  1.5
Alignment   gi|22044506|ref|NT_006344.12|Hs4_6501 Homo sapiens chromosome 4...    42  1.5
Alignment   gi|22044651|ref|NT_005332.10|Hs2_5489 Homo sapiens chromosome 2...    42  1.5
Alignment   gi|22064605|ref|NT_010823.10|Hs17_10980 Homo sapiens chromosome...    42  1.5
Alignment   gi|22042287|ref|NT_029865.7|Hs1_30120 Homo sapiens chromosome 1...    42  1.5
Alignment   gi|22045785|ref|NT_023974.12|Hs9_24130 Homo sapiens chromosome ...    40  5.7
Alignment   gi|22046387|ref|NT_023663.12|Hs8_23819 Homo sapiens chromosome ...    40  5.7
Alignment   gi|22063448|ref|NT_007819.10|Hs7_7976 Homo sapiens chromosome 7...    40  5.7
Alignment   gi|22056424|ref|NT_033950.2|Hs6_34105 Homo sapiens chromosome 6...    40  5.7
Alignment   gi|22051492|ref|NT_006654.10|Hs5_6811 Homo sapiens chromosome 5...    40  5.7
Alignment   gi|22050629|ref|NT_006431.10|Hs5_6588 Homo sapiens chromosome 5...    40  5.7
Alignment   gi|22047485|ref|NT_023132.9|Hs5_23288 Homo sapiens chromosome 5...    40  5.7
Alignment   gi|22047167|ref|NT_023089.10|Hs5_23245 Homo sapiens chromosome ...    40  5.7


>gi|22067223|ref|NT_011512.6|Hs21_11669 Homo sapiens chromosome 21 reference
                genomic contig
          Length = 28515771

 Score =  127 bits (64), Expect = 3e-26
 Identities = 118/136 (86%)
 Strand = Plus / Plus


Query: 964      tggaaacaaataccaaactgtgaaaatgtcaaaacgacccattgtgtctttcctcaaaat 1023
                ||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 20298832 tggaaacaaatacctgactgtgaaaatgtcaaaactacccagtgtgtctttcctcaaaac 20298891


Query: 1024     gttttcacgaaaggaattttcttcatccgtgtccaagcatctaatggaaatagcacatct 1083
                ||||||   |||||||||| | |  |||| || ||||||||| ||||||||| |||||||
Sbjct: 20298892 gttttccaaaaaggaatttaccttctccgcgtacaagcatctgatggaaataacacatct 20298951


Query: 1084     ctttggtccgaagaga 1099
                 ||||||| |||||||
Sbjct: 20298952 ttttggtctgaagaga 20298967


 Score =  103 bits (52), Expect = 5e-19
 Identities = 143/172 (83%), Gaps = 6/172 (3%)
 Strand = Plus / Plus


Query: 331      gggatggataattggataaagttgcctggatgtcaatatgttactagcactgaatgcaac 390
                |||||||||||||||||||| ||| |||| |||||  || ||||||| ||  ||||||||
Sbjct: 20290704 gggatggataattggataaaattgtctgggtgtcagaatattactagtaccaaatgcaac 20290763


Query: 391      ttttcttccatcaagcttaaaagcgtgtatgaaaaaattaaattgcgtataagagcagaa 450
                ||||||||  ||||||| ||    || |||||| ||||||||||||||||||||||||||
Sbjct: 20290764 ttttcttcactcaagctgaat---gtttatgaagaaattaaattgcgtataagagcagaa 20290820


Query: 451      acaggaaacagcacttctccgtggtatgaggttgagccgtttataccatttc 502
                | || |||   ||||||| | ||||||||||||||  | |||| ||||||||
Sbjct: 20290821 aaagaaaa---cacttcttcatggtatgaggttgactcatttacaccatttc 20290869


 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 128/154 (83%), Gaps = 3/154 (1%)
 Strand = Plus / Plus


Query: 514      attggccctccagatgtacatttagaagccgaagataaagcaataataataaacctctct 573
                ||||| |||||||| |||||||||||||| |||||||| |||||| | ||| || |||
Sbjct: 20292974 attggtcctccagaagtacatttagaagctgaagataaggcaatagtgatacacatct-- 20293031


Query: 574      cctcctggcacaaaaaacagtgtcatgtgggctatggatagttcaagtttcgtgtatagc 633
                 ||||||| |||||| | ||||| ||||||||| ||||| ||| ||| ||    ||||||
Sbjct: 20293032 -ctcctggaacaaaagatagtgttatgtgggctttggatggtttaagctttacatatagc 20293090


Query: 634      ttagtaatctggaaaaactcttcaagtctagaag 667
                ||||| |||||||||||||||||| || ||||||
Sbjct: 20293091 ttagttatctggaaaaactcttcaggtgtagaag 20293124


 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 98/115 (85%)
 Strand = Plus / Plus


Query: 1319     ctaacttgaaaccactgactgtgtattgtgtcaaagccagagcactcatcgagaatgaca 1378
                |||| ||||||||||||||||| |||||||| ||||||||||||| || |  | |||| |
Sbjct: 20302496 ctaatttgaaaccactgactgtatattgtgtgaaagccagagcacacaccatggatgaaa 20302555


Query: 1379     ggtggaatagaagcagtgtttttagtgacactgtgtgcgagaaaaccaaaccagg 1433
                 |  ||||| ||||||||||||||||||| |||| || |||||||| ||||||||
Sbjct: 20302556 agctgaataaaagcagtgtttttagtgacgctgtatgtgagaaaacaaaaccagg 20302610


 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 106/127 (83%)
 Strand = Plus / Plus


Query: 1577     agtatttcgctgaacagccactcaagaatctgcttctctccacctctgaagaacaaaccg 1636
                |||||||| ||||||||||| | |||||||| || || || || ||||| ||||||| ||
Sbjct: 20305015 agtatttctctgaacagccattgaagaatcttctgctttcaacttctgaggaacaaatcg 20305074


Query: 1637     aaatatgtttcatcgttgaaaatacaaacactattactacaatagaagagactgatcaaa 1696
                ||| |||||||||  ||||||||| || ||| ||| ||||| ||||||| ||| ||||||
Sbjct: 20305075 aaaaatgtttcataattgaaaatataagcacaattgctacagtagaagaaactaatcaaa 20305134


Query: 1697     ttgatga 1703
                 ||||||
Sbjct: 20305135 ctgatga 20305141


 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 104/126 (82%)
 Strand = Plus / Plus


Query: 683      tttatgccagagataaaattcaccaactctcaccagagacaacttactgtttaaaagtta 742
                ||||| ||||| |||||||| |  |||||||||||||||| ||||| ||| |||||||||
Sbjct: 20293252 tttattccagacataaaatttataaactctcaccagagactacttattgtctaaaagtta 20293311


Query: 743      aagccggactccgttcgccaagaaaagtcggtgtctacagtccagtgtattgtataaata 802
                |||| | ||| | | || || | ||| | |||||||| ||||||||  |||||||||| |
Sbjct: 20293312 aagcagcactacttacgtcatggaaaattggtgtctatagtccagtacattgtataaaga 20293371


Query: 803      ccacag 808
                ||||||
Sbjct: 20293372 ccacag 20293377


 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus


Query: 1499     tttatggtgtgaaagtcgtctcgcgatgtatcaattatgtgttcttcccatcaagtaaac 1558
                |||||| || ||||||| ||| | |||| ||||||||||| ||||| ||||||  |||||
Sbjct: 20303405 tttatgctgcgaaagtcttcttgagatgcatcaattatgtcttctttccatcacttaaac 20303464


Query: 1559     ctccttccactatagatgag 1578
                || |||||| ||||||||||
Sbjct: 20303465 cttcttccagtatagatgag 20303484


 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus


Query: 1926     aaaaagcaccttcagatcatcggtcctcaaaatacaggcaagcacttaactctttaaaa 1984
                ||||| || ||||||||||| |||||| ||||||| ||||||| ||||||| |||||||
Sbjct: 20305366 aaaaaacatcttcagatcataggtcctaaaaatacgggcaagctcttaactatttaaaa 20305424


 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus


Query: 864      ctatgttcttaaatggaattacacctatgaaaatgtgacttttcaagctcagtggctcca 923
                |||||||||||||||| |||| || |||| |||  |||| ||||||| ||||||||||||
Sbjct: 20295002 ctatgttcttaaatgggattatacatatgcaaacatgacctttcaagttcagtggctcca 20295061


 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus


Query: 1217     ctgtgaaccagctttacccactaatttatgaagttatttttagagaaaacacttcagata 1276
                |||||| ||||  ||| ||||| ||||||||| |||||||| | |||||||||||| ||
Sbjct: 20299180 ctgtgatccaggattatccactgatttatgaaattattttttgggaaaacacttcaaatg 20299239


Query: 1277     ctgag 1281
                |||||
Sbjct: 20299240 ctgag 20299244


 Score = 44.1 bits (22), Expect = 0.37
 Identities = 67/82 (81%)
 Strand = Plus / Plus


Query: 244      atcattgatgacaacttcatcctgaaatggaagagcagcagtgaatccgtcagcaatgtg 303
                ||||| ||||||||||| |||||||  ||||| || |||  ||| || ||| | ||||||
Sbjct: 20285266 atcatagatgacaactttatcctgaggtggaacaggagcgatgagtctgtcgggaatgtg 20285325


Query: 304      actttttcagcagattatcaaa 325
                |||||||||   ||||||||||
Sbjct: 20285326 actttttcattcgattatcaaa 20285347



>gi|22067527|ref|NT_010478.10|Hs16_10635 Homo sapiens chromosome 16
               reference genomic contig
          Length = 4329165

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Plus


Query: 967     aaacaaataccaaactgtgaaaatgtca 994
               |||||||||||||||||||| |||||||
Sbjct: 1396030 aaacaaataccaaactgtgacaatgtca 1396057



>gi|22042297|ref|NT_029256.8|Hs3_29415 Homo sapiens chromosome 3 reference
              genomic contig
          Length = 1530126

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus


Query: 798    aaataccacagtgaaacatcac 819
              ||||||||||||||||||||||
Sbjct: 142335 aaataccacagtgaaacatcac 142314



>gi|22062703|ref|NT_033241.2|Hs11_33417 Homo sapiens chromosome 11 reference
               genomic contig
          Length = 7748307

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus


Query: 2088    cctccatcttcctgatgtcacc 2109
               ||||||||||||||||||||||
Sbjct: 1055983 cctccatcttcctgatgtcacc 1056004



>gi|22057594|ref|NT_011772.8|HsX_11929 Homo sapiens chromosome X reference
              genomic contig
          Length = 1390134

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus


Query: 1309   tttactttctctaacttgaaaccactgac 1337
              |||||||||||||| || |||||||||||
Sbjct: 808913 tttactttctctaatttaaaaccactgac 808885



>gi|22047344|ref|NT_030735.6|Hs8_30991 Homo sapiens chromosome 8 reference
               genomic contig
          Length = 2412733

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus


Query: 249     tgatgacaacttcatcctgaa 269
               |||||||||||||||||||||
Sbjct: 2185621 tgatgacaacttcatcctgaa 2185601



>gi|22050628|ref|NT_007933.10|Hs7_8090 Homo sapiens chromosome 7 reference
                genomic contig
          Length = 64386157

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus


Query: 976      ccaaactgtgaaaatgtcaaa 996
                |||||||||||||||||||||
Sbjct: 34532556 ccaaactgtgaaaatgtcaaa 34532576



>gi|22052439|ref|NT_006788.10|Hs5_6945 Homo sapiens chromosome 5 reference
               genomic contig
          Length = 3960908

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus


Query: 918     gctccatgcctttttaaaaaa 938
               |||||||||||||||||||||
Sbjct: 3547654 gctccatgcctttttaaaaaa 3547674



>gi|22044506|ref|NT_006344.12|Hs4_6501 Homo sapiens chromosome 4 reference
               genomic contig
          Length = 7839908

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus


Query: 863     tctatgttcttaaatggaatt 883
               |||||||||||||||||||||
Sbjct: 4943687 tctatgttcttaaatggaatt 4943667



>gi|22044651|ref|NT_005332.10|Hs2_5489 Homo sapiens chromosome 2 reference
               genomic contig
          Length = 9107791

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus


Query: 249     tgatgacaacttcatcctgaa 269
               |||||||||||||||||||||
Sbjct: 6402230 tgatgacaacttcatcctgaa 6402210


 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus


Query: 209    cagatctcagatctcctgaa 228
              ||||||||||||||||||||
Sbjct: 307816 cagatctcagatctcctgaa 307835



>gi|22064605|ref|NT_010823.10|Hs17_10980 Homo sapiens chromosome 17
              reference genomic contig
          Length = 2063298

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus


Query: 498    atttcaagaagcacaaattgg 518
              |||||||||||||||||||||
Sbjct: 469009 atttcaagaagcacaaattgg 469029



>gi|22042287|ref|NT_029865.7|Hs1_30120 Homo sapiens chromosome 1 reference
              genomic contig
          Length = 4395636

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus


Query: 546    agataaagcaataataataaa 566
              |||||||||||||||||||||
Sbjct: 601186 agataaagcaataataataaa 601166



>gi|22045785|ref|NT_023974.12|Hs9_24130 Homo sapiens chromosome 9 reference
               genomic contig
          Length = 20138537

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus


Query: 489     gtttataccatttcaagaag 508
               ||||||||||||||||||||
Sbjct: 3746192 gtttataccatttcaagaag 3746173



>gi|22046387|ref|NT_023663.12|Hs8_23819 Homo sapiens chromosome 8
              reference genomic contig
          Length = 2255428

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus


Query: 722    caacttactgtttaaaagtt 741
              ||||||||||||||||||||
Sbjct: 318049 caacttactgtttaaaagtt 318068



>gi|22063448|ref|NT_007819.10|Hs7_7976 Homo sapiens chromosome 7 reference
                genomic contig
          Length = 47428039

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus


Query: 27       gcacgggtcccaggtcccgg 46
                ||||||||||||||||||||
Sbjct: 34361623 gcacgggtcccaggtcccgg 34361642



>gi|22056424|ref|NT_033950.2|Hs6_34105 Homo sapiens chromosome 6 genomic
             contig, alternate haplotype DR51
          Length = 582053

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus


Query: 2464  catttatcccaattacatca 2483
             ||||||||||||||||||||
Sbjct: 74738 catttatcccaattacatca 74719



>gi|22051492|ref|NT_006654.10|Hs5_6811 Homo sapiens chromosome 5 reference
               genomic contig
          Length = 6396214

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus


Query: 1947    ggtcctcaaaatacaggcaa 1966
               ||||||||||||||||||||
Sbjct: 3804180 ggtcctcaaaatacaggcaa 3804199



>gi|22050629|ref|NT_006431.10|Hs5_6588 Homo sapiens chromosome 5 reference
                genomic contig
          Length = 19491418

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus


Query: 2293     tggaaatgtctttagaaagg 2312
                ||||||||||||||||||||
Sbjct: 15045120 tggaaatgtctttagaaagg 15045101



>gi|22047485|ref|NT_023132.9|Hs5_23288 Homo sapiens chromosome 5 reference
               genomic contig
          Length = 10043041

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus


Query: 1436    gcacttcccaagcctggctt 1455
               ||||||||||||||||||||
Sbjct: 5122500 gcacttcccaagcctggctt 5122519



>gi|22047167|ref|NT_023089.10|Hs5_23245 Homo sapiens chromosome 5 reference
               genomic contig
          Length = 2019772

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus


Query: 1600    aagaatctgcttctctccacctctgaag 1627
               ||||||||| |||| |||||||||||||
Sbjct: 1030540 aagaatctgtttctttccacctctgaag 1030513


  Database: Homo Sapiens Gene(masked sequence)
    Posted date:  Nov 13, 2002  9:59 PM
  Number of letters in database: 2,826,392,627
  Number of sequences in database:  1395

Lambda     K      H
    1.37    0.711     1.31

Gapped
Lambda     K      H
    1.37    0.711     1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
length of query: 2483
length of database: 2,826,392,627
effective HSP length: 22
effective length of query: 2461
effective length of database: 2,826,361,937
effective search space: 6955676726957
effective search space used: 6955676726957
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)