Search to ncbiHGDS database
Query= 20030826C-003586 (20030826C-003586) 20030826C-003586
(1122 letters)
Database: Homo Sapiens Gene(masked sequence)
545 sequences; 2,866,452,029 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|29738645|ref|NT_024524.12|Hs13_24680 Homo sapiens chromosome ... 860 0.0
Alignment gi|29801680|ref|NT_008583.15|Hs10_8740 Homo sapiens chromosome 1... 807 0.0
Alignment gi|29798463|ref|NT_009952.13|Hs13_10109 Homo sapiens chromosome ... 656 0.0
Alignment gi|29797789|ref|NT_010641.13|Hs17_10798 Homo sapiens chromosome ... 636 e-180
Alignment gi|29791392|ref|NT_022184.12|Hs2_22340 Homo sapiens chromosome 2... 379 e-102
Alignment gi|29802395|ref|NT_011651.13|HsX_11808 Homo sapiens chromosome X... 143 2e-31
Alignment gi|29736559|ref|NT_026437.10|Hs14_26604 Homo sapiens chromosome ... 123 2e-25
Alignment gi|29796755|ref|NT_007819.13|Hs7_7976 Homo sapiens chromosome 7 ... 109 3e-21
Alignment gi|29794674|ref|NT_033968.4|Hs7_34123 Homo sapiens chromosome 7 ... 96 5e-17
Alignment gi|29800594|ref|NT_011109.15|Hs19_11266 Homo sapiens chromosome ... 74 2e-10
Alignment gi|29795292|ref|NT_007758.10|Hs7_7915 Homo sapiens chromosome 7 ... 64 2e-07
Alignment gi|29732996|ref|NT_029998.6|Hs7_30253 Homo sapiens chromosome 7 ... 60 3e-06
Alignment gi|29798863|ref|NT_007933.12|Hs7_8090 Homo sapiens chromosome 7 ... 60 3e-06
Alignment gi|29799662|ref|NT_077451.2|Hs5_77500 Homo sapiens chromosome 5 ... 60 3e-06
Alignment gi|29791389|ref|NT_016354.15|Hs4_16510 Homo sapiens chromosome 4... 60 3e-06
Alignment gi|29793889|ref|NT_078006.1|Hs3_78075 Homo sapiens chromosome 3 ... 60 3e-06
Alignment gi|29801019|ref|NT_011255.13|Hs19_11412 Homo sapiens chromosome ... 60 3e-06
Alignment gi|29808952|ref|NT_010542.13|Hs16_10699 Homo sapiens chromosome ... 60 3e-06
Alignment gi|29806318|ref|NT_035113.4|Hs11_35275 Homo sapiens chromosome 1... 60 3e-06
Alignment gi|29741275|ref|NT_008705.14|Hs10_8862 Homo sapiens chromosome 1... 60 3e-06
>gi|29738645|ref|NT_024524.12|Hs13_24680 Homo sapiens chromosome 13 genomic
contig
Length = 55334817
Score = 860 bits (434), Expect = 0.0
Identities = 580/627 (92%), Gaps = 10/627 (1%)
Strand = Plus / Minus
Query: 82 aattagtccgagtggagcgagcgag--------ctgagtggttgtgtggtcgcgtcccgg 133
||||||||||||||||||||||||| |||||||| || |||||| | || | |
Sbjct: 10319855 aattagtccgagtggagcgagcgagtgagcaagctgagtggctgcgtggtcacatctcag 10319796
Query: 134 agaccggtagcgcttgcagcatggctgaccaactgactgaagagcagattgcagagttca 193
| || |||||||||||||||||||||||||||||||||||| ||||| |||||| ||||
Sbjct: 10319795 aaactggtagcgcttgcagcatggctgaccaactgactgaaaggcagactgcagaattca 10319736
Query: 194 aagaagctttttcactatttgacaaggatggtgatggaactataacaacaaaggaattgg 253
|||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||| |
Sbjct: 10319735 aagaagctttttcactatttaacaaagatggtgatggaactataacaacaa-ggaatcag 10319677
Query: 254 gaactgtaatgaggtctcttgggcagaatcccacagaagcagagttacaggacatgatta 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10319676 gaactgtaatgaggtctcttgggcagaatcccacagaagcagagttacaggacatgatta 10319617
Query: 314 atgaagtagatgctgatggtaacggcacaattgacttcccagaatttctgacaatgatgg 373
|||||||||||||||||||||| |||||| |||||||||| |||||||| ||||||||||
Sbjct: 10319616 atgaagtagatgctgatggtaatggcacagttgacttccctgaatttctaacaatgatgg 10319557
Query: 374 caagaaaaatgaaagatacagacagtgaagaagaaattagagaagcattccgtgtgtttg 433
|||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 10319556 caagaaaaatgaaagacacagacagtgaagaagaaattagagatgcattctgtgtgtttg 10319497
Query: 434 ataaggatggcaatggctatattagtgcagcagagcttcgccatgtgatgacaaaccttg 493
||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||
Sbjct: 10319496 ataaggatggcaatggctatattagtgcaacagaacttcaccatgtgatgacaaaccttg 10319437
Query: 494 gagagaagttaacagatgaagaggttgatgaaatgatcagggaagcagatattgatggtg 553
||||||| ||||||||||| ||||||||||||||||||||| || || ||||||||||||
Sbjct: 10319436 gagagaatttaacagatgacgaggttgatgaaatgatcaggtaaccacatattgatggtg 10319377
Query: 554 atggtcaagtaaactatgaagagtttgtacaaatgatgacagcaaagtgaagacgttgta 613
|||||||| | | |||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 10319376 atggtcaaatgatctatgaagagtttgtacaaatgatgacagcaaagtgaacaacttgta 10319317
Query: 614 cagaatgtgttaaatttcttgtacaaaattgtttatttgccttttctttgtttgtaactt 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10319316 cagaatgtgttaaatttcttgtacaaaattgtttatttgccttttctttgtttgtaactt 10319257
Query: 674 atctgtaaaaggtttc-ccctactgtc 699
|||||||||||||||| ||||||||||
Sbjct: 10319256 atctgtaaaaggtttctccctactgtc 10319230
>gi|29801680|ref|NT_008583.15|Hs10_8740 Homo sapiens chromosome 10 genomic
contig
Length = 30112630
Score = 807 bits (407), Expect = 0.0
Identities = 555/601 (92%), Gaps = 10/601 (1%)
Strand = Plus / Plus
Query: 100 gagcgagctgagtggttgtgtggtcgcgtcccggagaccggtagcgcttgcagcatggct 159
|||||||| ||||||||||||||| ||||| |||| ||| ||||| ||||||||||||||
Sbjct: 20474535 gagcgagcagagtggttgtgtggttgcgtctcggaaaccagtagcacttgcagcatggct 20474594
Query: 160 gaccaactgactgaagagcagattgcagagttcaaagaagctttttcactatttgacaag 219
|||||||||||||| |||||||||| ||| |||||||||| ||||||||||||||||||
Sbjct: 20474595 gaccaactgactgaggagcagattgtagaattcaaagaagttttttcactatttgacaaa 20474654
Query: 220 gatggtgatggaactataacaacaaaggaattgggaactgtaatgaggtctcttgggcag 279
||||||||||||||||||||||||||| || | ||||||||||||||||||| |||||
Sbjct: 20474655 gatggtgatggaactataacaacaaagaaactaggaactgtaatgaggtctca--ggcag 20474712
Query: 280 aatcccacagaagcagagttacaggacatgattaatgaagtagatgctgatggtaacggc 339
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 20474713 aatcccacagaagcagagttacaggacatgattaatgaagtagatgctgatggtaatggc 20474772
Query: 340 acaattgacttcccagaatttctgacaatgatggcaagaaaaatgaaagatacagacagt 399
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 20474773 acaattgacttccctgaatttctgacaatgatggcaagaaaaatgaaagacacagacagt 20474832
Query: 400 gaagaagaaattagagaagcattccgtgtgtttgataaggatggcaatggctatattagt 459
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 20474833 gaagaagaaattagagaaacattctgtgtgtttgataaggatggcaatggctatattagt 20474892
Query: 460 gcagcagagcttcgccatgtgatgacaaaccttggagagaagttaacagatgaagaggtt 519
| | ||| |||| ||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 20474893 ggtgtagaacttcaccatgtgatgacaaaccttggagtgaagttaacagatgaagaagtt 20474952
Query: 520 gatgaaatgatcagggaagcagatattgatggtgatggtcaagtaaactatgaagagttt 579
||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 20474953 gattaaatgatcagggaagcagatcctgatggtgatggtcaagtaaactat---gagttt 20475009
Query: 580 gtacaaatgatgacagcaaagtgaagacgttgtacagaatgtgttaaatttcttgtacaa 639
|||||||||||||||||| | ||||||| |||||||||||||||||||||||||| ||||
Sbjct: 20475010 gtacaaatgatgacagcataatgaagaccttgtacagaatgtgttaaatttcttgcacaa 20475069
Query: 640 aattgtttatttgccttttctttgtttgtaacttatctgtaaaaggtttc-ccctactgt 698
|| ||||||||||||| |||||||||||||||||||||||||| ||| |||||||||
Sbjct: 20475070 aactgtttatttgcct----tttgtttgtaacttatctgtaaaaggcttctccctactgt 20475125
Query: 699 c 699
|
Sbjct: 20475126 c 20475126
Score = 260 bits (131), Expect = 2e-66
Identities = 179/195 (91%), Gaps = 5/195 (2%)
Strand = Plus / Plus
Query: 714 tatgcatgtatagtaattaggacttcattcctccatgttttcttcccttatcttactgtc 773
||||||||||| ||||| |||||||||||||||||||| ||||||||||| |||||
Sbjct: 20475136 tatgcatgtatggtaatcaggacttcattcctccatgtgttcttccctta-----ctgtc 20475190
Query: 774 attgtcctgaaaccttattttagaaaattgatcaagtaacatgttgcatgtggcttactc 833
|||| |||||||||||||||||||||| |||| |||||||||||||| ||||||||||||
Sbjct: 20475191 attgccctgaaaccttattttagaaaactgatgaagtaacatgttgcctgtggcttactc 20475250
Query: 834 tggatatatctaagcccttctgcacatctaaacttagatggagttggtcaaatgagggaa 893
|||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 20475251 cggatatatctaagcccttctgcacatctaaacttaggtggagttggtcaaataagggaa 20475310
Query: 894 catctgggttatgcc 908
|||| ||||||||||
Sbjct: 20475311 catccgggttatgcc 20475325
Score = 168 bits (85), Expect = 4e-39
Identities = 123/135 (91%), Gaps = 3/135 (2%)
Strand = Plus / Plus
Query: 921 aagtagttttctttaggaactgtcagcatgttgttgttaaagtgtggagttgtaactctg 980
|||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||
Sbjct: 20475334 aagtagttttctttaggaactgtcagcatggtgttg---aagtatggagttgtaactctg 20475390
Query: 981 cgtggactatggacagtcaacaatatgtacttaaaagttgcactattgcaaaacgggtgt 1040
|||||||| |||||| |||||||||||||||||||||||||||| |||| || ||||||
Sbjct: 20475391 tgtggactacggacagccaacaatatgtacttaaaagttgcactactgcagaatgggtgt 20475450
Query: 1041 tttatccaggtactc 1055
||||||||||||||
Sbjct: 20475451 attatccaggtactc 20475465
Score = 60.0 bits (30), Expect = 3e-06
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 1064 ttttttgtactgctgggcccgtaccagaaacattttctttta 1105
|||| ||||||||||| || ||||||||||||||||||||||
Sbjct: 20475487 ttttctgtactgctggtcctgtaccagaaacattttctttta 20475528
>gi|29798463|ref|NT_009952.13|Hs13_10109 Homo sapiens chromosome 13 genomic
contig
Length = 25443670
Score = 656 bits (331), Expect = 0.0
Identities = 454/495 (91%)
Strand = Plus / Minus
Query: 86 agtccgagtggagcgagcgagctgagtggttgtgtggtcgcgtcccggagaccggtagcg 145
|||||||||||||||||||||| ||||||| ||| |||||||| |||| ||||||||||
Sbjct: 12383237 agtccgagtggagcgagcgagccgagtggtcgtgcagtcgcgtctcggaaaccggtagcg 12383178
Query: 146 cttgcagcatggctgaccaactgactgaagagcagattgcagagttcaaagaagcttttt 205
||| ||||||||||||||||||||||| ||||||||||| ||| |||||| |||||| ||
Sbjct: 12383177 ctttcagcatggctgaccaactgactggagagcagattgtagaattcaaataagcttatt 12383118
Query: 206 cactatttgacaaggatggtgatggaactataacaacaaaggaattgggaactgtaatga 265
|||||||||||| || ||||||||||||||||||||||||||| ||||||| | |||||
Sbjct: 12383117 tactatttgacaaagacggtgatggaactataacaacaaaggaactgggaacagaaatga 12383058
Query: 266 ggtctcttgggcagaatcccacagaagcagagttacaggacatgattaatgaagtagatg 325
|||||||| ||| | |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 12383057 ggtctcttaggcggcatcccacagaagcagagttacaggacatgatttatgaagtagatg 12382998
Query: 326 ctgatggtaacggcacaattgacttcccagaatttctgacaatgatggcaagaaaaatga 385
||||| |||| |||| | ||| |||||| |||||| ||||||||| ||||||||||||||
Sbjct: 12382997 ctgatagtaatggcagagttggcttccctgaatttgtgacaatgagggcaagaaaaatga 12382938
Query: 386 aagatacagacagtgaagaagaaattagagaagcattccgtgtgtttgataaggatggca 445
|||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 12382937 aagacgcaggcagtgaagaagaaatgagagaagcattccgtgtgtttgataaggatggca 12382878
Query: 446 atggctatattagtgcagcagagcttcgccatgtgatgacaaaccttggagagaagttaa 505
|||| ||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||
Sbjct: 12382877 atggttatattagtgcagcagaacttcaccatgcgatgacaaaccttggagagaagttaa 12382818
Query: 506 cagatgaagaggttgatgaaatgatcagggaagcagatattgatggtgatggtcaagtaa 565
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 12382817 cagatgaagaggttgacgaaatgatcagggaagcagatattgatggtgacggtcaagtaa 12382758
Query: 566 actatgaagagtttg 580
||| |||||||||||
Sbjct: 12382757 actgtgaagagtttg 12382743
Score = 135 bits (68), Expect = 6e-29
Identities = 81/84 (96%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 617 aatgtgttaaatttcttgtacaaaattgtttatttgccttttctttgtttgtaacttatc 676
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 12383737 aatgtgttaaatttcttttacaaaattatttatttgccttttctttgtttgtaacttatc 12383796
Query: 677 tgtaaaaggtttc-ccctactgtc 699
||||||||||||| ||||||||||
Sbjct: 12383797 tgtaaaaggtttctccctactgtc 12383820
Score = 115 bits (58), Expect = 5e-23
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 723 atagtaattaggacttcattcctccatgttttcttcccttatcttactgtcattgtcctg 782
|||||||||||||||| |||||| |||||||||||||| | ||| |||||||||||||||
Sbjct: 12383842 atagtaattaggacttaattccttcatgttttcttcccctgtctcactgtcattgtcctg 12383901
Query: 783 aaaccttattttagaaaattga 804
|||| |||||||||||||||||
Sbjct: 12383902 aaactttattttagaaaattga 12383923
Score = 48.1 bits (24), Expect = 0.011
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 1008 tacttaaaagttgcactattgcaaaacgggtgttttatccaggtactc 1055
||||||||||| |||||||||||||| ||| | |||| |||||||||
Sbjct: 12384243 tacttaaaagtagcactattgcaaaatgggcatattattcaggtactc 12384290
Score = 40.1 bits (20), Expect = 2.6
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 1064 ttttttgtactgctgggcccgtaccagaaacatttt 1099
||||||||||| |||| | ||||||||||||||||
Sbjct: 12384595 ttttttgtactactggttctgtaccagaaacatttt 12384630
>gi|29797789|ref|NT_010641.13|Hs17_10798 Homo sapiens chromosome 17 genomic
contig
Length = 11435178
Score = 636 bits (321), Expect = e-180
Identities = 520/583 (89%), Gaps = 5/583 (0%)
Strand = Plus / Plus
Query: 109 gagtggttgtgtggtcgcgtcccggagaccggtagcgcttgcagcatggctgaccaa-ct 167
|||||||||||||||| |||| |||| |||||||| |||||||||| || |||||| ||
Sbjct: 2129571 gagtggttgtgtggtcacgtctcggaaaccggtaggacttgcagcatagcagaccaaact 2129630
Query: 168 gactgaagagcagattgcagagttcaaagaagctttttcactatttgacaaggatggtga 227
|||||||||||||||| |||| |||| |||||||||||| |||||||||| || |||
Sbjct: 2129631 gactgaagagcagattccagaattcatagaagctttttccctatttgacagagacaatga 2129690
Query: 228 tggaactataacaacaaaggaattgggaactgtaatgaggtctcttgggcagaatcccac 287
|||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||
Sbjct: 2129691 tggaactataacaacaaaggaagtggaaacgataatgaggtctcttgggtagaatcccat 2129750
Query: 288 agaagcagagttacaggacatgattaatgaagtagatgctgatggtaacggcacaattga 347
|||||| ||||| |||||||||||||||||||||||||||||||| | || ||
Sbjct: 2129751 gaaagcagggttaccagacatgattaatgaagtagatgctgatggtaatagaacg---ga 2129807
Query: 348 cttcccagaatttctgacaatgatggcaagaaaaatgaaagatacagacagtgaagaaga 407
|| || ||||||||||||||||||||||||||||||||||| ||| | |||||||||||
Sbjct: 2129808 ctctcctgaatttctgacaatgatggcaagaaaaatgaaagacacacaaagtgaagaaga 2129867
Query: 408 aattagagaagcattccgtgtgtttgataaggatggcaatggctatattagtgcagcaga 467
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2129868 aattagagaagcattccttgtgtttgataaggatggcaatggctatatcagtgcagcaga 2129927
Query: 468 gcttcgccatgtgatgacaaaccttggagagaagttaacagatgaagaggttgatgaaat 527
||| |||||||||||||||||| |||||||||| |||||||||| |||||||||||||
Sbjct: 2129928 actttgccatgtgatgacaaaccctggagagaagctaacagatgacaaggttgatgaaat 2129987
Query: 528 gatcagggaagcagatattgatggtgatggtcaagtaaactatgaagagtttgtacaaat 587
|||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 2129988 gatcagggaagcaggtattgatggtgatggtcaggtaaactaggaagagtttgtacaaac 2130047
Query: 588 gatgacagcaaagtgaagacgttgtacagaatgtgttaaatttcttgtacaaaattgttt 647
||||||||| |||||||||| || |||||||| ||||| |||||||||||||||||||||
Sbjct: 2130048 gatgacagcgaagtgaagaccttatacagaatatgttacatttcttgtacaaaattgttt 2130107
Query: 648 atttgcc-ttttctttgtttgtaacttatctgtaaaaggtttc 689
|||| || |||||||||||| ||| |||||| |||||||||||
Sbjct: 2130108 attttcctttttctttgtttataatttatctctaaaaggtttc 2130150
Score = 216 bits (109), Expect = 2e-53
Identities = 180/204 (88%), Gaps = 11/204 (5%)
Strand = Plus / Plus
Query: 715 atgcatgtatagtaattaggacttcattcctccatgttttcttcccttatcttact---- 770
||||||| ||||||| ||||||| | |||||||||||||||||| |||||||||||
Sbjct: 2130168 atgcatgcatagtaactaggactccgttcctccatgttttcttctcttatcttacttgtc 2130227
Query: 771 ------gtcattgtcctgaaaccttattttagaaaattgatcaagtaacatgttgcatgt 824
|||||||| |||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 2130228 attgttgtcattgttctgaaaacttattttagaaaattgatcaagtaacatgttacatgt 2130287
Query: 825 ggcttactctggatatatctaagcccttctgcacatctaaacttagatggagttggtcaa 884
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2130288 ggcttactctagatatatctaagcccttctgcacagctaaacttagatggagttggtcaa 2130347
Query: 885 atgagggaacatctgggttatgcc 908
| | || |||||||||||| ||||
Sbjct: 2130348 a-ggggaaacatctgggttgtgcc 2130370
Score = 155 bits (78), Expect = 6e-35
Identities = 130/145 (89%), Gaps = 3/145 (2%)
Strand = Plus / Plus
Query: 924 tagttttctttaggaactgtcagcatgttgttgttaaagtgtggagttgtaactctgcgt 983
||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||| |
Sbjct: 2130380 tagttttctttagaaactg-cagcatgttgttgttgaagtgtggagttgtaactctg--t 2130436
Query: 984 ggactatggacagtcaacaatatgtacttaaaagttgcactattgcaaaacgggtgtttt 1043
|| || ||||||||||||||||||| ||||| |||||||||||||||| |||||| ||
Sbjct: 2130437 acacaattgacagtcaacaatatgtacctaaaacttgcactattgcaaaaggggtgtatt 2130496
Query: 1044 atccaggtactcgtacactattttt 1068
|||||||||||| |||||| |||||
Sbjct: 2130497 atccaggtactcatacacttttttt 2130521
>gi|29791392|ref|NT_022184.12|Hs2_22340 Homo sapiens chromosome 2 genomic
contig
Length = 68373974
Score = 379 bits (191), Expect = e-102
Identities = 194/195 (99%)
Strand = Plus / Minus
Query: 714 tatgcatgtatagtaattaggacttcattcctccatgttttcttcccttatcttactgtc 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26203742 tatgcatgtatagtaattaggacttcattcctccatgttttcttcccttatcttactgtc 26203683
Query: 774 attgtcctgaaaccttattttagaaaattgatcaagtaacatgttgcatgtggcttactc 833
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26203682 attgtcctaaaaccttattttagaaaattgatcaagtaacatgttgcatgtggcttactc 26203623
Query: 834 tggatatatctaagcccttctgcacatctaaacttagatggagttggtcaaatgagggaa 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26203622 tggatatatctaagcccttctgcacatctaaacttagatggagttggtcaaatgagggaa 26203563
Query: 894 catctgggttatgcc 908
|||||||||||||||
Sbjct: 26203562 catctgggttatgcc 26203548
Score = 323 bits (163), Expect = 1e-85
Identities = 182/187 (97%), Gaps = 1/187 (0%)
Strand = Plus / Minus
Query: 921 aagtagttttctttaggaactgtcagcatgttgttgttaaagtgtggagttgtaactctg 980
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 26203540 aagtagttttctttaggaactgtcagcatgttgttgttgaagtgtggagttgtaactctg 26203481
Query: 981 cgtggactatggacagtcaacaatatgtacttaaaagttgcactattgcaaaacgggtgt 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26203480 cgtggactatggacagtcaacaatatgtacttaaaagttgcactattgcaaaacgggtgt 26203421
Query: 1041 tttatccaggtactcgtacacta-ttttttgtactgctgggcccgtaccagaaacatttt 1099
|||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||
Sbjct: 26203420 attatccaggtactcgtacactatttttttgtactgctggtcctgtaccagaaacatttt 26203361
Query: 1100 cttttat 1106
|||||||
Sbjct: 26203360 cttttat 26203354
Score = 276 bits (139), Expect = 3e-71
Identities = 148/151 (98%)
Strand = Plus / Minus
Query: 185 cagagttcaaagaagctttttcactatttgacaaggatggtgatggaactataacaacaa 244
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 26205736 cagaattcaaagaagctttttcactatttgacaaagatggtgatggaactataacaacaa 26205677
Query: 245 aggaattgggaactgtaatgaggtctcttgggcagaatcccacagaagcagagttacagg 304
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 26205676 aggaattgggaactgtaatgagatctcttgggcagaatcccacagaagcagagttacagg 26205617
Query: 305 acatgattaatgaagtagatgctgatggtaa 335
|||||||||||||||||||||||||||||||
Sbjct: 26205616 acatgattaatgaagtagatgctgatggtaa 26205586
Score = 250 bits (126), Expect = 1e-63
Identities = 135/138 (97%)
Strand = Plus / Minus
Query: 437 aggatggcaatggctatattagtgcagcagagcttcgccatgtgatgacaaaccttggag 496
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 26204931 aggatggcaatggctatattagtgctgcagaacttcgccatgtgatgacaaaccttggag 26204872
Query: 497 agaagttaacagatgaagaggttgatgaaatgatcagggaagcagatattgatggtgatg 556
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 26204871 agaagttaacagatgaagaagttgatgaaatgatcagggaagcagatattgatggtgatg 26204812
Query: 557 gtcaagtaaactatgaag 574
||||||||||||||||||
Sbjct: 26204811 gtcaagtaaactatgaag 26204794
Score = 230 bits (116), Expect = 1e-57
Identities = 126/128 (98%), Gaps = 1/128 (0%)
Strand = Plus / Minus
Query: 573 agagtttgtacaaatgatgacagcaaagtgaagacgttgtacagaatgtgttaaatttct 632
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 26203877 agagtttgtacaaatgatgacagcaaagtgaagaccttgtacagaatgtgttaaatttct 26203818
Query: 633 tgtacaaaattgtttatttgccttttctttgtttgtaacttatctgtaaaaggtttc-cc 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 26203817 tgtacaaaattgtttatttgccttttctttgtttgtaacttatctgtaaaaggtttctcc 26203758
Query: 692 ctactgtc 699
||||||||
Sbjct: 26203757 ctactgtc 26203750
Score = 192 bits (97), Expect = 3e-46
Identities = 106/109 (97%)
Strand = Plus / Minus
Query: 331 ggtaacggcacaattgacttcccagaatttctgacaatgatggcaagaaaaatgaaagat 390
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 26205464 ggtaatggcacaattgacttccctgaatttctgacaatgatggcaagaaaaatgaaagac 26205405
Query: 391 acagacagtgaagaagaaattagagaagcattccgtgtgtttgataagg 439
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26205404 acagacagtgaagaagaaattagagaagcattccgtgtgtttgataagg 26205356
Score = 127 bits (64), Expect = 1e-26
Identities = 73/76 (96%)
Strand = Plus / Minus
Query: 82 aattagtccgagtggagcgagcgagctgagtggttgtgtggtcgcgtcccggagaccggt 141
||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 26219586 aattagtccgagtggagagagcgagctgagtggttgtgtggtcgcgtctcggaaaccggt 26219527
Query: 142 agcgcttgcagcatgg 157
||||||||||||||||
Sbjct: 26219526 agcgcttgcagcatgg 26219511
Score = 63.9 bits (32), Expect = 2e-07
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 156 ggctgaccaactgactgaagagcagattgcag 187
||||||||||||||||||||||||||||||||
Sbjct: 26213836 ggctgaccaactgactgaagagcagattgcag 26213805
>gi|29802395|ref|NT_011651.13|HsX_11808 Homo sapiens chromosome X genomic
contig
Length = 31236858
Score = 143 bits (72), Expect = 2e-31
Identities = 216/263 (82%), Gaps = 2/263 (0%)
Strand = Plus / Plus
Query: 287 cagaagcagagttacaggacatgattaatgaagtagatgctgatggtaacggcacaattg 346
||||||| || |||| ||| ||||| || ||||| ||||| ||||||||| ||| ||||
Sbjct: 17995290 cagaagccgaattacgggatatgatcaacgaagtggatgccaatggtaacgacaccattg 17995349
Query: 347 acttcccagaatttctgacaatgatggcaagaaaaatgaaagatacagacagtgaagaag 406
||||||| |||||| || | ||||| || |||||||||||||||||||| ||| ||||||
Sbjct: 17995350 acttccccgaatttttggctatgatagctagaaaaatgaaagatacagatagtaaagaag 17995409
Query: 407 aaattagagaagcattccgtgtgtttgataaggatggcaatggctatattagtgcagcag 466
|||| || |||||| | || ||||| |||| ||||||||| || || ||||||||||
Sbjct: 17995410 aaatccatgaggcattctgagtctttgacaagggtggcaatggttacatcagtgcagcag 17995469
Query: 467 agcttcgccatgtgatgacaaaccttggagagaagttaacagatgaagaggttgatgaaa 526
| || | || || ||||||||| ||||| || ||||||||||||| || |||||||
Sbjct: 17995470 aactatgtcacgtcatgacaaac--aggagaaaaactaacagatgaagaagtagatgaaa 17995527
Query: 527 tgatcagggaagcagatattgat 549
||||||| |||||||||||||||
Sbjct: 17995528 tgatcagagaagcagatattgat 17995550
>gi|29736559|ref|NT_026437.10|Hs14_26604 Homo sapiens chromosome 14 genomic
contig
Length = 87191216
Score = 123 bits (62), Expect = 2e-25
Identities = 119/138 (86%)
Strand = Plus / Plus
Query: 437 aggatggcaatggctatattagtgcagcagagcttcgccatgtgatgacaaaccttggag 496
||||||||||||| ||||| ||||||||||| || || || || ||||||||| | ||||
Sbjct: 70790762 aggatggcaatggttatatcagtgcagcagaactacgtcacgtcatgacaaacttaggag 70790821
Query: 497 agaagttaacagatgaagaggttgatgaaatgatcagggaagcagatattgatggtgatg 556
| || ||||||||||||| || |||||||||||||| ||||||||||||||||| || |
Sbjct: 70790822 aaaaactaacagatgaagaagtagatgaaatgatcagagaagcagatattgatggagacg 70790881
Query: 557 gtcaagtaaactatgaag 574
| ||||| ||||||||||
Sbjct: 70790882 gacaagtcaactatgaag 70790899
Score = 105 bits (53), Expect = 5e-20
Identities = 95/109 (87%)
Strand = Plus / Plus
Query: 331 ggtaacggcacaattgacttcccagaatttctgacaatgatggcaagaaaaatgaaagat 390
||||| ||||| ||||||||||| |||||| |||| |||||||| |||||||||||||||
Sbjct: 70790246 ggtaatggcaccattgacttccccgaatttttgactatgatggctagaaaaatgaaagat 70790305
Query: 391 acagacagtgaagaagaaattagagaagcattccgtgtgtttgataagg 439
||||| |||||||||||||| | || |||||||| || ||||| ||||
Sbjct: 70790306 acagatagtgaagaagaaatccgtgaggcattccgagtctttgacaagg 70790354
Score = 101 bits (51), Expect = 8e-19
Identities = 126/151 (83%)
Strand = Plus / Plus
Query: 185 cagagttcaaagaagctttttcactatttgacaaggatggtgatggaactataacaacaa 244
|||| ||||| ||||| || || |||||||| || ||||| ||||| || || |||||||
Sbjct: 70787641 cagaattcaaggaagccttctccctatttgataaagatggcgatggcaccatcacaacaa 70787700
Query: 245 aggaattgggaactgtaatgaggtctcttgggcagaatcccacagaagcagagttacagg 304
||||| | |||||||| |||||||| || || ||||| || |||||||| || || ||||
Sbjct: 70787701 aggaacttggaactgtcatgaggtcactgggtcagaacccaacagaagctgaattgcagg 70787760
Query: 305 acatgattaatgaagtagatgctgatggtaa 335
| ||||| |||||||| ||||||||||||||
Sbjct: 70787761 atatgatcaatgaagtggatgctgatggtaa 70787791
Score = 40.1 bits (20), Expect = 2.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 375 aagaaaaatgaaagatacag 394
||||||||||||||||||||
Sbjct: 2230279 aagaaaaatgaaagatacag 2230298
>gi|29796755|ref|NT_007819.13|Hs7_7976 Homo sapiens chromosome 7 genomic
contig
Length = 47493540
Score = 109 bits (55), Expect = 3e-21
Identities = 90/99 (90%), Gaps = 2/99 (2%)
Strand = Plus / Plus
Query: 1006 tgtacttaaaagttgcactattgcaaaacgggtgttttatccaggtactcgtacactatt 1065
||||||||||||||||||| |||||||| |||| | ||||| ||||||||||||||||||
Sbjct: 37098970 tgtacttaaaagttgcact-ttgcaaaatgggtatgttatctaggtactcgtacactatt 37099028
Query: 1066 ttttgtactgctgggcccgtaccagaaacattttctttt 1104
||| |||||||||| || |||||||||||||||| ||||
Sbjct: 37099029 ttt-gtactgctggtcctgtaccagaaacattttttttt 37099066
Score = 65.9 bits (33), Expect = 5e-08
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 481 atgacaaaccttggagagaagttaacagatgaagaggttgat-gaaatgatcagggaagc 539
|||||| ||||||||||||||||||||||||| || |||||| |||||||||| |||||
Sbjct: 45136549 atgacataccttggagagaagttaacagatgaggaagttgataaaaatgatcagagaagc 45136490
Query: 540 a 540
|
Sbjct: 45136489 a 45136489
Score = 65.9 bits (33), Expect = 5e-08
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 481 atgacaaaccttggagagaagttaacagatgaagaggttgat-gaaatgatcagggaagc 539
|||||| ||||||||||||||||||||||||| || |||||| |||||||||| |||||
Sbjct: 39120802 atgacataccttggagagaagttaacagatgaggaagttgataaaaatgatcagagaagc 39120743
Query: 540 a 540
|
Sbjct: 39120742 a 39120742
Score = 52.0 bits (26), Expect = 7e-04
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 609 ttgtacagaatgtgttaaatttcttgtacaaaattgtttatttgccttttctttgtttgt 668
|||||||| |||||| || ||| | ||||| ||||||||| |||||||| |||||||||
Sbjct: 45136421 ttgtacagtgtgtgttgaagttcctatacaacattgtttatctgccttttgtttgtttgt 45136362
Query: 669 aa 670
||
Sbjct: 45136361 aa 45136360
Score = 52.0 bits (26), Expect = 7e-04
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 609 ttgtacagaatgtgttaaatttcttgtacaaaattgtttatttgccttttctttgtttgt 668
|||||||| |||||| || ||| | ||||| ||||||||| |||||||| |||||||||
Sbjct: 39120674 ttgtacagtgtgtgttgaagttcctatacaacattgtttatctgccttttgtttgtttgt 39120615
Query: 669 aa 670
||
Sbjct: 39120614 aa 39120613
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 255 aactgtaatgaggtctcttgggca 278
||||||||||||||||||||||||
Sbjct: 45123929 aactgtaatgaggtctcttgggca 45123906
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 255 aactgtaatgaggtctcttgggca 278
||||||||||||||||||||||||
Sbjct: 39103167 aactgtaatgaggtctcttgggca 39103144
Score = 46.1 bits (23), Expect = 0.042
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 204 ttcactatttgacaaggatggtg 226
|||||||||||||||||||||||
Sbjct: 20718450 ttcactatttgacaaggatggtg 20718428
Score = 44.1 bits (22), Expect = 0.17
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 805 tcaagtaacatgttgcatgtggcttactctggatatatctaa 846
||||||| || |||| ||||||||||||||| |||| |||||
Sbjct: 39120166 tcaagtagcaagttgtatgtggcttactctgaatatttctaa 39120125
Score = 44.1 bits (22), Expect = 0.17
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 805 tcaagtaacatgttgcatgtggcttactctggatatatctaa 846
||||||| || |||| ||||||||||||||| |||| |||||
Sbjct: 45135916 tcaagtagcaagttgtatgtggcttactctgaatatttctaa 45135875
Score = 40.1 bits (20), Expect = 2.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 255 aactgtaatgaggtctcttgggca 278
||||| ||||||||||||||||||
Sbjct: 39114876 aactgcaatgaggtctcttgggca 39114853
>gi|29794674|ref|NT_033968.4|Hs7_34123 Homo sapiens chromosome 7 genomic
contig
Length = 6573011
Score = 95.6 bits (48), Expect = 5e-17
Identities = 150/184 (81%)
Strand = Plus / Minus
Query: 227 atggaactataacaacaaaggaattgggaactgtaatgaggtctcttgggcagaatccca 286
|||| ||||| |||||||||||| | ||||| | |||||||| || || ||||| ||
Sbjct: 4917245 atggcactatcacaacaaaggaacttggaaccatcatgaggtcactgggtcagaacccag 4917186
Query: 287 cagaagcagagttacaggacatgattaatgaagtagatgctgatggtaacggcacaattg 346
||||| | || || ||||||||||| |||||||| ||| ||||||| || | ||| |||
Sbjct: 4917185 cagaatctgaattgcaggacatgatcaatgaagtggattctgatggcaatgacaccattt 4917126
Query: 347 acttcccagaatttctgacaatgatggcaagaaaaatgaaagatacagacagtgaagaag 406
| |||| |||||| |||| |||||||| |||||||||||||| ||| | ||||||||||
Sbjct: 4917125 aattcctcgaatttttgaccatgatggctagaaaaatgaaagacacatatagtgaagaag 4917066
Query: 407 aaat 410
||||
Sbjct: 4917065 aaat 4917062
Score = 77.8 bits (39), Expect = 1e-11
Identities = 123/151 (81%)
Strand = Plus / Minus
Query: 457 agtgcagcagagcttcgccatgtgatgacaaaccttggagagaagttaacagatgaagag 516
||||||||||| || || ||||| ||||||||| | ||||| || ||| |||||||||
Sbjct: 4917017 agtgcagcagaactacgtcatgtcatgacaaacttaggagaaaaactaatagatgaagaa 4916958
Query: 517 gttgatgaaatgatcagggaagcagatattgatggtgatggtcaagtaaactatgaagag 576
|| ||||||||||| | ||||||||||||||||| || | ||||| | ||||||||
Sbjct: 4916957 gtagatgaaatgatgacagaagcagatattgatggagacagacaagttgattatgaagaa 4916898
Query: 577 tttgtacaaatgatgacagcaaagtgaagac 607
|| |||| |||||||| ||||| |||||||
Sbjct: 4916897 ttaatacagatgatgactgcaaaatgaagac 4916867
Score = 65.9 bits (33), Expect = 5e-08
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 481 atgacaaaccttggagagaagttaacagatgaagaggttgat-gaaatgatcagggaagc 539
|||||| ||||||||||||||||||||||||| || |||||| |||||||||| |||||
Sbjct: 1052437 atgacataccttggagagaagttaacagatgaggaagttgataaaaatgatcagagaagc 1052496
Query: 540 a 540
|
Sbjct: 1052497 a 1052497
Score = 65.9 bits (33), Expect = 5e-08
Identities = 55/61 (90%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 481 atgacaaaccttggagagaagttaacagatgaagaggttgat-gaaatgatcagggaagc 539
|||||| ||||||||||||||||||||||||| || |||||| |||||||||| |||||
Sbjct: 6038258 atgacataccttggagagaagttaacagatgaggaagttgataaaaatgatcagagaagc 6038317
Query: 540 a 540
|
Sbjct: 6038318 a 6038318
Score = 58.0 bits (29), Expect = 1e-05
Identities = 54/61 (88%), Gaps = 1/61 (1%)
Strand = Plus / Plus
Query: 481 atgacaaaccttggagagaagttaacagatgaagaggttgat-gaaatgatcagggaagc 539
|||||| |||||| |||||||||||||||||| || |||||| |||||||||| |||||
Sbjct: 5408102 atgacataccttgaagagaagttaacagatgaggaagttgataaaaatgatcagagaagc 5408161
Query: 540 a 540
|
Sbjct: 5408162 a 5408162
Score = 52.0 bits (26), Expect = 7e-04
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 609 ttgtacagaatgtgttaaatttcttgtacaaaattgtttatttgccttttctttgtttgt 668
|||||||| |||||| || ||| | ||||| ||||||||| |||||||| |||||||||
Sbjct: 6038386 ttgtacagtgtgtgttgaagttcctatacaacattgtttatctgccttttgtttgtttgt 6038445
Query: 669 aa 670
||
Sbjct: 6038446 aa 6038447
Score = 52.0 bits (26), Expect = 7e-04
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 609 ttgtacagaatgtgttaaatttcttgtacaaaattgtttatttgccttttctttgtttgt 668
|||||||| |||||| || ||| | ||||| ||||||||| |||||||| |||||||||
Sbjct: 1052565 ttgtacagtgtgtgttgaagttcctatacaacattgtttatctgccttttgtttgtttgt 1052624
Query: 669 aa 670
||
Sbjct: 1052625 aa 1052626
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 255 aactgtaatgaggtctcttgggca 278
||||||||||||||||||||||||
Sbjct: 6056127 aactgtaatgaggtctcttgggca 6056150
Score = 44.1 bits (22), Expect = 0.17
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 805 tcaagtaacatgttgcatgtggcttactctggatatatctaa 846
||||||| || |||| ||||||||||||||| |||| |||||
Sbjct: 6038897 tcaagtagcaagttgtatgtggcttactctgaatatttctaa 6038938
Score = 44.1 bits (22), Expect = 0.17
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 805 tcaagtaacatgttgcatgtggcttactctggatatatctaa 846
||||||| || |||| ||||||||||||||| |||| |||||
Sbjct: 5408736 tcaagtagcaagttgtatgtggcttactctgaatatttctaa 5408777
Score = 44.1 bits (22), Expect = 0.17
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 805 tcaagtaacatgttgcatgtggcttactctggatatatctaa 846
||||||| || |||| ||||||||||||||| |||| |||||
Sbjct: 1053075 tcaagtagcaagttgtatgtggcttactctgaatatttctaa 1053116
>gi|29800594|ref|NT_011109.15|Hs19_11266 Homo sapiens chromosome 19 genomic
contig
Length = 31383029
Score = 73.8 bits (37), Expect = 2e-10
Identities = 121/149 (81%)
Strand = Plus / Plus
Query: 185 cagagttcaaagaagctttttcactatttgacaaggatggtgatggaactataacaacaa 244
|||||||||| || || || || || |||||||||||||| ||||| ||||| || || |
Sbjct: 19379669 cagagttcaaggaggccttctccctctttgacaaggatggagatggcactatcaccacca 19379728
Query: 245 aggaattgggaactgtaatgaggtctcttgggcagaatcccacagaagcagagttacagg 304
|||| ||||| || || ||||| || || || ||||| ||||| ||||||||| | ||||
Sbjct: 19379729 aggagttggggacagtgatgagatccctgggacagaaccccactgaagcagagctgcagg 19379788
Query: 305 acatgattaatgaagtagatgctgatggt 333
| ||||| ||||| || ||||| ||||||
Sbjct: 19379789 atatgatcaatgaggtggatgcagatggt 19379817
Score = 60.0 bits (30), Expect = 3e-06
Identities = 87/106 (82%)
Strand = Plus / Plus
Query: 334 aacggcacaattgacttcccagaatttctgacaatgatggcaagaaaaatgaaagataca 393
||||| || ||||||||||| || || ||||| |||||||| ||||| ||||| || |||
Sbjct: 19379959 aacgggaccattgacttcccggagttcctgaccatgatggccagaaagatgaaggacaca 19380018
Query: 394 gacagtgaagaagaaattagagaagcattccgtgtgtttgataagg 439
|||||||| || || || |||| || |||||||| ||||| ||||
Sbjct: 19380019 gacagtgaggaggagatccgagaggcgttccgtgtctttgacaagg 19380064
Score = 60.0 bits (30), Expect = 3e-06
Identities = 111/138 (80%)
Strand = Plus / Plus
Query: 437 aggatggcaatggctatattagtgcagcagagcttcgccatgtgatgacaaaccttggag 496
||||||| |||||||| || || || |||||||| || || || ||||| ||||| || |
Sbjct: 19380319 aggatgggaatggctacatcagcgccgcagagctgcgtcacgtaatgacgaacctggggg 19380378
Query: 497 agaagttaacagatgaagaggttgatgaaatgatcagggaagcagatattgatggtgatg 556
||||| | || ||||| ||||| ||||| ||||||||||| || || || ||||| ||||
Sbjct: 19380379 agaagctgaccgatgaggaggtggatgagatgatcagggaggctgacatcgatggagatg 19380438
Query: 557 gtcaagtaaactatgaag 574
| || || || |||||||
Sbjct: 19380439 gccaggtcaattatgaag 19380456
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 573 agagtttgtacaaatgatgacagcaaagtgaag 605
|||||||||||| |||||||| |||||||||||
Sbjct: 19380598 agagtttgtacagatgatgactgcaaagtgaag 19380630
Score = 48.1 bits (24), Expect = 0.011
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 156 ggctgaccaactgactgaagagcagattgcag 187
||||||||| |||||||| |||||||||||||
Sbjct: 19377301 ggctgaccagctgactgaggagcagattgcag 19377332
Score = 40.1 bits (20), Expect = 2.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 525 aatgatcagggaagcagata 544
||||||||||||||||||||
Sbjct: 27904900 aatgatcagggaagcagata 27904881
>gi|29795292|ref|NT_007758.10|Hs7_7915 Homo sapiens chromosome 7 genomic
contig
Length = 12748966
Score = 63.9 bits (32), Expect = 2e-07
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 481 atgacaaaccttggagagaagttaacagatgaagaggttgat-gaaatgatcagggaagc 539
|||||| ||||||||||||||||||||||||| || |||||| |||||||||| |||||
Sbjct: 3333255 atgacataccttggagagaagttaacagatgaggaagttgataaaaatgatcagagaagc 3333196
Score = 56.0 bits (28), Expect = 4e-05
Identities = 153/192 (79%), Gaps = 2/192 (1%)
Strand = Plus / Plus
Query: 481 atgacaaaccttggagagaagttaacagatgaagaggttgatgaaa-tgatcagggaagc 539
|||||| ||||||||||||||||| ||||||| || ||||| ||| |||| || || ||
Sbjct: 3880449 atgacataccttggagagaagttagcagatgaggaagttgacaaaaatgatgagagatgc 3880508
Query: 540 aga-tattgatggtgatggtcaagtaaactatgaagagtttgtacaaatgatgacagcaa 598
| | || |||| | ||| ||||||||||| ||||||| ||| | || ||| ||||||
Sbjct: 3880509 aaaatactgatagcgatagtcaagtaaaccatgaagaatttccataactgacatcagcaa 3880568
Query: 599 agtgaagacgttgtacagaatgtgttaaatttcttgtacaaaattgtttatttgcctttt 658
|||| | |||||||| |||||| || ||| ||||||| | |||||||||||||| |
Sbjct: 3880569 agtgggaatattgtacagtgtgtgttgaagttcctgtacaacagtgtttatttgccttct 3880628
Query: 659 ctttgtttgtaa 670
|||||||||||
Sbjct: 3880629 gtttgtttgtaa 3880640
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 255 aactgtaatgaggtctcttgggca 278
||||||||||||||||||||||||
Sbjct: 4391569 aactgtaatgaggtctcttgggca 4391546
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 255 aactgtaatgaggtctcttgggca 278
||||||||||||||||||||||||
Sbjct: 3315076 aactgtaatgaggtctcttgggca 3315053
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 255 aactgtaatgaggtctcttgggca 278
||||||||||||||||||||||||
Sbjct: 3326799 aactgtaatgaggtctcttgggca 3326776
Score = 40.1 bits (20), Expect = 2.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 255 aactgtaatgaggtctcttgggca 278
||||||||||||| ||||||||||
Sbjct: 3887585 aactgtaatgaggcctcttgggca 3887608
>gi|29732996|ref|NT_029998.6|Hs7_30253 Homo sapiens chromosome 7 genomic
contig
Length = 264664
Score = 60.0 bits (30), Expect = 3e-06
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 481 atgacaaaccttggagagaagttaacagatgaagaggttgat 522
|||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 34024 atgacataccttggagagaagttaacagatgaggaagttgat 34065
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 255 aactgtaatgaggtctcttgggca 278
||||||||||||||||||||||||
Sbjct: 50479 aactgtaatgaggtctcttgggca 50502
>gi|29798863|ref|NT_007933.12|Hs7_8090 Homo sapiens chromosome 7 genomic
contig
Length = 64383103
Score = 60.0 bits (30), Expect = 3e-06
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 481 atgacaaaccttggagagaagttaacagatgaagaggttgat 522
|||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 53464734 atgacataccttggagagaagttaacagatgaggaagttgat 53464693
Score = 54.0 bits (27), Expect = 2e-04
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 248 aattgggaactgtaatgaggtctcttgggca 278
|||| ||||||||||||||||||||||||||
Sbjct: 53446030 aattaggaactgtaatgaggtctcttgggca 53446000
Score = 52.0 bits (26), Expect = 7e-04
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 609 ttgtacagaatgtgttaaatttcttgtacaaaattgtttatttgccttttctttgtttgt 668
|||||||| |||||| || ||| | ||||| ||||||||| |||||||| |||||||||
Sbjct: 53464606 ttgtacagtgtgtgttgaagttcctatacaacattgtttatctgccttttgtttgtttgt 53464547
Query: 669 aa 670
||
Sbjct: 53464546 aa 53464545
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 255 aactgtaatgaggtctcttgggca 278
||||||||||||||||||||||||
Sbjct: 948126 aactgtaatgaggtctcttgggca 948149
Score = 44.1 bits (22), Expect = 0.17
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 805 tcaagtaacatgttgcatgtggcttactctggatatatctaa 846
||||||| || |||| ||||||||||||||| |||| |||||
Sbjct: 53464095 tcaagtagcaagttgtatgtggcttactctgaatatttctaa 53464054
Score = 40.1 bits (20), Expect = 2.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1079 ggcccgtaccagaaacattt 1098
||||||||||||||||||||
Sbjct: 29730992 ggcccgtaccagaaacattt 29730973
Score = 40.1 bits (20), Expect = 2.6
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 807 aagtaacatgttgcatgtggcttactctggatatatctaa 846
||||| || |||| ||||||||||||||| |||| |||||
Sbjct: 941879 aagtagcaagttgtatgtggcttactctgaatatgtctaa 941918
>gi|29799662|ref|NT_077451.2|Hs5_77500 Homo sapiens chromosome 5 genomic
contig
Length = 3994252
Score = 60.0 bits (30), Expect = 3e-06
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 481 atgacaaaccttggagagaagttaacagatgaagaggttgat 522
|||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 3837383 atgacataccttggagagaagttaacagatgaggaagttgat 3837342
Score = 52.0 bits (26), Expect = 7e-04
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 609 ttgtacagaatgtgttaaatttcttgtacaaaattgtttatttgccttttctttgtttgt 668
|||||||| |||||| || ||| | ||||| ||||||||| |||||||| |||||||||
Sbjct: 3837255 ttgtacagtgtgtgttgaagttcctatacaacattgtttatctgccttttgtttgtttgt 3837196
Query: 669 aa 670
||
Sbjct: 3837195 aa 3837194
Score = 40.1 bits (20), Expect = 2.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 255 aactgtaatgaggtctcttg 274
||||||||||||||||||||
Sbjct: 3820594 aactgtaatgaggtctcttg 3820575
>gi|29791389|ref|NT_016354.15|Hs4_16510 Homo sapiens chromosome 4 genomic
contig
Length = 62898447
Score = 60.0 bits (30), Expect = 3e-06
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 481 atgacaaaccttggagagaagttaacagatgaagaggttgat 522
|||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 44044063 atgacataccttggagagaagttaacagatgaggaagttgat 44044022
Score = 60.0 bits (30), Expect = 3e-06
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 481 atgacaaaccttggagagaagttaacagatgaagaggttgat 522
|||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 44829083 atgacataccttggagagaagttaacagatgaggaagttgat 44829124
Score = 60.0 bits (30), Expect = 3e-06
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 609 ttgtacagaatgtgttaaatttcttgtacaaaattgtttatttgccttttctttgtttgt 668
|||||||| ||||||||| ||| | ||||| ||||||||| |||||||| |||||||||
Sbjct: 44829211 ttgtacagtgtgtgttaaagttcctatacaacattgtttatctgccttttgtttgtttgt 44829270
Query: 669 aa 670
||
Sbjct: 44829271 aa 44829272
Score = 52.0 bits (26), Expect = 7e-04
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 609 ttgtacagaatgtgttaaatttcttgtacaaaattgtttatttgccttttctttgtttgt 668
|||||||| |||||| || ||| | ||||| ||||||||| |||||||| |||||||||
Sbjct: 44043938 ttgtacagtgtgtgttgaagttcctatacaacattgtttatctgccttttgtttgtttgt 44043879
Query: 669 aa 670
||
Sbjct: 44043878 aa 44043877
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 255 aactgtaatgaggtctcttgggca 278
||||||||||||||||||||||||
Sbjct: 44025368 aactgtaatgaggtctcttgggca 44025345
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 255 aactgtaatgaggtctcttgggca 278
||||||||||||||||||||||||
Sbjct: 44847759 aactgtaatgaggtctcttgggca 44847782
Score = 44.1 bits (22), Expect = 0.17
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 805 tcaagtaacatgttgcatgtggcttactctggatatatctaa 846
||||||| || |||| ||||||||||||||| |||| |||||
Sbjct: 44043427 tcaagtagcaagttgtatgtggcttactctgaatatttctaa 44043386
Score = 44.1 bits (22), Expect = 0.17
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 805 tcaagtaacatgttgcatgtggcttactctggatatatctaa 846
||||||| || |||| ||||||||||||||| |||| |||||
Sbjct: 44829722 tcaagtagcaagttgtatgtggcttactctgaatatttctaa 44829763
Score = 40.1 bits (20), Expect = 2.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 635 tacaaaattgtttatttgcctttt 658
||||||||| ||||||||||||||
Sbjct: 25936168 tacaaaattttttatttgcctttt 25936145
>gi|29793889|ref|NT_078006.1|Hs3_78075 Homo sapiens chromosome 3 genomic
contig
Length = 353746
Score = 60.0 bits (30), Expect = 3e-06
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 481 atgacaaaccttggagagaagttaacagatgaagaggttgat 522
|||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 333992 atgacataccttggagagaagttaacagatgaggaagttgat 333951
Score = 52.0 bits (26), Expect = 7e-04
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 609 ttgtacagaatgtgttaaatttcttgtacaaaattgtttatttgccttttctttgtttgt 668
|||||||| |||||| || ||| | ||||| ||||||||| |||||||| |||||||||
Sbjct: 333864 ttgtacagtgtgtgttgaagttcctatacaacattgtttatctgccttttgtttgtttgt 333805
Query: 669 aa 670
||
Sbjct: 333804 aa 333803
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 255 aactgtaatgaggtctcttgggca 278
||||||||||||||||||||||||
Sbjct: 317559 aactgtaatgaggtctcttgggca 317536
>gi|29801019|ref|NT_011255.13|Hs19_11412 Homo sapiens chromosome 19
genomic contig
Length = 7285994
Score = 60.0 bits (30), Expect = 3e-06
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 481 atgacaaaccttggagagaagttaacagatgaagaggttgat 522
|||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 144332 atgacataccttggagagaagttaacagatgaggaagttgat 144373
Score = 52.0 bits (26), Expect = 7e-04
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 609 ttgtacagaatgtgttaaatttcttgtacaaaattgtttatttgccttttctttgtttgt 668
|||||||| |||||| || ||| | ||||| ||||||||| |||||||| |||||||||
Sbjct: 144460 ttgtacagtgtgtgttgaagttcctatacaacattgtttatctgccttttgtttgtttgt 144519
Query: 669 aa 670
||
Sbjct: 144520 aa 144521
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 255 aactgtaatgaggtctcttgggca 278
||||||||||||||||||||||||
Sbjct: 160779 aactgtaatgaggtctcttgggca 160802
>gi|29808952|ref|NT_010542.13|Hs16_10699 Homo sapiens chromosome 16 genomic
contig
Length = 1850452
Score = 60.0 bits (30), Expect = 3e-06
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 481 atgacaaaccttggagagaagttaacagatgaagaggttgat 522
|||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 1785597 atgacataccttggagagaagttaacagatgaggaagttgat 1785556
Score = 52.0 bits (26), Expect = 7e-04
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 609 ttgtacagaatgtgttaaatttcttgtacaaaattgtttatttgccttttctttgtttgt 668
|||||||| |||||| || ||| | ||||| ||||||||| |||||||| |||||||||
Sbjct: 1785469 ttgtacagtgtgtgttgaagttcctatacaacattgtttatctgccttttgtttgtttgt 1785410
Query: 669 aa 670
||
Sbjct: 1785409 aa 1785408
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 255 aactgtaatgaggtctcttgggca 278
||||||||||||||||||||||||
Sbjct: 1769181 aactgtaatgaggtctcttgggca 1769158
>gi|29806318|ref|NT_035113.4|Hs11_35275 Homo sapiens chromosome 11 genomic
contig
Length = 1088864
Score = 60.0 bits (30), Expect = 3e-06
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 481 atgacaaaccttggagagaagttaacagatgaagaggttgat 522
|||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 1014813 atgacataccttggagagaagttaacagatgaggaagttgat 1014772
Score = 52.0 bits (26), Expect = 7e-04
Identities = 53/62 (85%)
Strand = Plus / Minus
Query: 609 ttgtacagaatgtgttaaatttcttgtacaaaattgtttatttgccttttctttgtttgt 668
|||||||| |||||| || ||| | ||||| ||||||||| |||||||| |||||||||
Sbjct: 1014685 ttgtacagtgtgtgttgaagttcctatacaacattgtttatctgccttttgtttgtttgt 1014626
Query: 669 aa 670
||
Sbjct: 1014625 aa 1014624
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 255 aactgtaatgaggtctcttgggca 278
||||||||||||||||||||||||
Sbjct: 998391 aactgtaatgaggtctcttgggca 998368
>gi|29741275|ref|NT_008705.14|Hs10_8862 Homo sapiens chromosome 10 genomic
contig
Length = 20794168
Score = 60.0 bits (30), Expect = 3e-06
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 481 atgacaaaccttggagagaagttaacagatgaagaggttgat 522
|||||| ||||||||||||||||||||||||| || ||||||
Sbjct: 20709414 atgacataccttggagagaagttaacagatgaggaagttgat 20709373
Score = 48.1 bits (24), Expect = 0.011
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 255 aactgtaatgaggtctcttgggca 278
||||||||||||||||||||||||
Sbjct: 20690506 aactgtaatgaggtctcttgggca 20690483
Score = 46.1 bits (23), Expect = 0.042
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 636 acaaaattgtttatttgccttttctttgtttgtaa 670
|||| ||||||||| |||||||| |||||||||||
Sbjct: 20709259 acaacattgtttatctgccttttgtttgtttgtaa 20709225
Score = 44.1 bits (22), Expect = 0.17
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 805 tcaagtaacatgttgcatgtggcttactctggatatatctaa 846
||||||| || |||| ||||||||||||||| |||| |||||
Sbjct: 20708775 tcaagtagcaagttgtatgtggcttactctgaatatttctaa 20708734
Score = 40.1 bits (20), Expect = 2.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 255 aactgtaatgaggtctcttgggca 278
|||||||||||||||| |||||||
Sbjct: 20709638 aactgtaatgaggtctgttgggca 20709615
Database: Homo Sapiens Gene(masked sequence)
Posted date: Oct 8, 2003 7:48 PM
Number of letters in database: 2,866,452,029
Number of sequences in database: 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
length of query: 1122
length of database: 2,866,452,029
effective HSP length: 21
effective length of query: 1101
effective length of database: 2,866,440,584
effective search space: 3155951082984
effective search space used: 3155951082984
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)