Search to RefSeq (Human) database
Query= 20030531C-001983 (20030531C-001983) 20030531C-001983
(1197 letters)
Database: RefSeq (Homo Sapiens/Amino Acid)
19,244 sequences; 10,046,356 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|23943850|ref|NP_705718.1| (NM_153498) CamKI-like protein kin... 627 e-180
Alignment gi|9966875|ref|NP_065130.1| (NM_020397) CamKI-like protein kina... 611 e-175
Alignment gi|4502553|ref|NP_003647.1| (NM_003656) calcium/calmodulin-depe... 525 e-149
Alignment gi|14196445|ref|NP_065172.1| (NM_020439) calcium/calmodulin-dep... 459 e-129
Alignment gi|13129008|ref|NP_076951.1| (NM_024046) hypothetical protein M... 290 2e-78
Alignment gi|27901803|ref|NP_006733.1| (NM_006742) protein serine kinase ... 284 1e-76
Alignment gi|4502557|ref|NP_001735.1| (NM_001744) calcium/calmodulin-depe... 269 3e-72
Alignment gi|14916455|ref|NP_149117.1| (NM_033126) serine/threonine kinas... 254 1e-67
Alignment gi|4758128|ref|NP_004725.1| (NM_004734) doublecortin and CaM ki... 252 4e-67
Alignment gi|22749267|ref|NP_689832.1| (NM_152619) hypothetical protein M... 246 2e-65
>gi|23943850|ref|NP_705718.1| (NM_153498) CamKI-like protein kinase
beta isoform [Homo sapiens]
Length = 385
Score = 627 bits (1617), Expect = e-180
Identities = 310/333 (93%), Positives = 312/333 (93%)
Frame = +3
Query: 3 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 182
FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL
Sbjct: 25 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 84
Query: 183 EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRD 362
EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRD
Sbjct: 85 EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRD 144
Query: 363 LKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDC 542
LKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDC
Sbjct: 145 LKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDC 204
Query: 543 WSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 722
WSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP
Sbjct: 205 WSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 264
Query: 723 NKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRKLHX 902
NKRYTCEQAARHPWIAGDTAL+KNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRKLH
Sbjct: 265 NKRYTCEQAARHPWIAGDTALNKNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRKLHL 324
Query: 903 XXXXXXXXXXXXXXXXXXXQKDCRAPSTLCSFM 1001
QKDC APSTLCSF+
Sbjct: 325 GSSLDSSNASVSSSLSLASQKDCLAPSTLCSFI 357
>gi|9966875|ref|NP_065130.1| (NM_020397) CamKI-like protein kinase
[Homo sapiens]
Length = 357
Score = 611 bits (1575), Expect = e-175
Identities = 302/323 (93%), Positives = 303/323 (93%)
Frame = +3
Query: 3 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 182
FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL
Sbjct: 25 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 84
Query: 183 EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRD 362
EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRD
Sbjct: 85 EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRD 144
Query: 363 LKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDC 542
LKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDC
Sbjct: 145 LKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDC 204
Query: 543 WSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 722
WSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP
Sbjct: 205 WSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 264
Query: 723 NKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRKLHX 902
NKRYTCEQAARHPWIAGDTAL+KNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRKLH
Sbjct: 265 NKRYTCEQAARHPWIAGDTALNKNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRKLHL 324
Query: 903 XXXXXXXXXXXXXXXXXXXQKDC 971
QKDC
Sbjct: 325 GSSLDSSNASVSSSLSLASQKDC 347
>gi|4502553|ref|NP_003647.1| (NM_003656)
calcium/calmodulin-dependent protein kinase I [Homo
sapiens]
Length = 370
Score = 525 bits (1351), Expect = e-149
Identities = 255/298 (85%), Positives = 276/298 (92%)
Frame = +3
Query: 3 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 182
F++ LGTGAFSEV+LAE+K T KL A+KCI K+AL+GKE S+ENEIAVL KIKH NIVAL
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 183 EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRD 362
+DIYES HLYL+MQLVSGGELFDRIVEKGFYTE+DAS LI QVLDAV YLH +GIVHRD
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRD 141
Query: 363 LKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDC 542
LKPENLLYYS DE+SKIMISDFGLSKME G V+STACGTPGYVAPEVLAQKPYSKAVDC
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDC 201
Query: 543 WSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 722
WSIGVIAYILLCGYPPFYDEND+KLFEQILKAEYEFDSPYWDDISDSAKDFIR+LMEKDP
Sbjct: 202 WSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDP 261
Query: 723 NKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRKL 896
KR+TCEQA +HPWIAGDTAL KNIH+SVS QI+KNFAKSKW+QAFNATAVVRHMRKL
Sbjct: 262 EKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNATAVVRHMRKL 319
>gi|14196445|ref|NP_065172.1| (NM_020439)
calcium/calmodulin-dependent protein kinase IG [Homo
sapiens]
Length = 476
Score = 459 bits (1182), Expect = e-129
Identities = 226/299 (75%), Positives = 260/299 (86%)
Frame = +3
Query: 3 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 182
F E LG+GAFSEV L +++ TGKLFA+KCI KK+ ++SS+ENEIAVL+KIKHENIV L
Sbjct: 25 FMEVLGSGAFSEVFLVKQRLTGKLFALKCI-KKSPAFRDSSLENEIAVLKKIKHENIVTL 83
Query: 183 EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRD 362
EDIYES H YLVMQLVSGGELFDRI+E+G YTEKDAS +I+QVL AV YLH GIVHRD
Sbjct: 84 EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRD 143
Query: 363 LKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDC 542
LKPENLLY + +E SKIMI+DFGLSKME G +MSTACGTPGYVAPEVLAQKPYSKAVDC
Sbjct: 144 LKPENLLYLTPEENSKIMITDFGLSKMEQNG-IMSTACGTPGYVAPEVLAQKPYSKAVDC 202
Query: 543 WSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 722
WSIGVI YILLCGYPPFY+E +SKLFE+I + YEF+SP+WDDIS+SAKDFI +L+EKDP
Sbjct: 203 WSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDP 262
Query: 723 NKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRKLH 899
N+RYTCE+A HPWI G+TAL ++I+ SVS QI+KNFAKSKWRQAFNA AVV HMRKLH
Sbjct: 263 NERYTCEKALSHPWIDGNTALHRDIYPSVSLQIQKNFAKSKWRQAFNAAAVVHHMRKLH 321
>gi|13129008|ref|NP_076951.1| (NM_024046) hypothetical protein
MGC8407 [Homo sapiens]
Length = 501
Score = 290 bits (741), Expect = 2e-78
Identities = 138/302 (45%), Positives = 207/302 (67%), Gaps = 8/302 (2%)
Frame = +3
Query: 9 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALED 188
+ + T F E+ A++K TGKL K K+ + + +NEI +L+ +KH NI+ L D
Sbjct: 28 QVIKTEEFCEIFRAKDKTTGKLHTCKKFQKRDGRKVRKAAKNEIGILKMVKHPNILQLVD 87
Query: 189 IYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLK 368
++ + ++ ++L +G E+FD I+++G+Y+E+D S ++RQVL+AV YLH + IVHR+LK
Sbjct: 88 VFVTRKEYFIFLELATGREVFDWILDQGYYSERDTSNVVRQVLEAVAYLHSLKIVHRNLK 147
Query: 369 PENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWS 548
ENL+YY++ + SKI+ISDF L+K+E ++ CGTP Y+APEV+ ++ Y + VDCW+
Sbjct: 148 LENLVYYNRLKNSKIVISDFHLAKLE--NGLIKEPCGTPEYLAPEVVGRQRYGRPVDCWA 205
Query: 549 IGVIAYILLCGYPPFYDE--------NDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRN 704
IGVI YILL G PPFY+E +D LF +IL +YEFDSPYWDDIS +AKD +
Sbjct: 206 IGVIMYILLSGNPPFYEEVEEDDYENHDKNLFRKILAGDYEFDSPYWDDISQAAKDLVTR 265
Query: 705 LMEKDPNKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNFAKSKWRQAFNATAVVRH 884
LME + ++R T E+A H WI+G+ A KNI + V AQI KNFA++KW++A T +++
Sbjct: 266 LMEVEQDQRITAEEAISHEWISGNAASDKNIKDGVCAQIEKNFARAKWKKAVRVTTLMKR 325
Query: 885 MR 890
+R
Sbjct: 326 LR 327
>gi|27901803|ref|NP_006733.1| (NM_006742) protein serine kinase H1;
serine/threonine-protein kinase H1 [Homo sapiens]
Length = 424
Score = 284 bits (726), Expect = 1e-76
Identities = 138/278 (49%), Positives = 193/278 (68%), Gaps = 4/278 (1%)
Frame = +3
Query: 6 KETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALE 185
K +G G+FS VV E +AT + +A+K I K +G+E E+E+ VLR+++H NI+ L
Sbjct: 101 KALIGRGSFSRVVRVEHRATRQPYAIKMIETKYREGREVC-ESELRVLRRVRHANIIQLV 159
Query: 186 DIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDL 365
+++E+ +Y+VM+L +GGELFDRI+ KG +TE+DA+ +++ VLD V YLH +GI HRDL
Sbjct: 160 EVFETQERVYMVMELATGGELFDRIIAKGSFTERDATRVLQMVLDGVRYLHALGITHRDL 219
Query: 366 KPENLLYYSQDEESKIMISDFGLSKMEGKGD--VMSTACGTPGYVAPEVLAQKPYSKAVD 539
KPENLLYY +SKI+I+DFGL+ KGD +M T CGTP Y+APEVL +KPY+ +VD
Sbjct: 220 KPENLLYYHPGTDSKIIITDFGLASARKKGDDCLMKTTCGTPEYIAPEVLVRKPYTNSVD 279
Query: 540 CWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKD 719
W++GVIAYILL G PF D+N ++L+ QIL+ +Y + W +S+ AKDFI L+ D
Sbjct: 280 MWALGVIAYILLSGTMPFEDDNRTRLYRQILRGKYSYSGEPWPSVSNLAKDFIDRLLTVD 339
Query: 720 PNKRYTCEQAARHPWIAGDTALS--KNIHESVSAQIRK 827
P R T QA RHPW+ A S KN+H S+S + K
Sbjct: 340 PGARMTALQALRHPWVVSMAASSSMKNLHRSISQNLLK 377
>gi|4502557|ref|NP_001735.1| (NM_001744)
calcium/calmodulin-dependent protein kinase IV; brain
Ca(2+)-calmodulin-dependent protein kinase type IV;
calcium/calmodulin-dependent protein kinase type IV
catalytic chain; CAM kinase IV; CAM kinase- GR [Homo
sapiens]
Length = 473
Score = 269 bits (687), Expect = 3e-72
Identities = 140/306 (45%), Positives = 194/306 (62%), Gaps = 13/306 (4%)
Frame = +3
Query: 15 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIY 194
LG GA S V ++K T K +A+K + K K + EI VL ++ H NI+ L++I+
Sbjct: 52 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDK---KIVRTEIGVLLRLSHPNIIKLKEIF 108
Query: 195 ESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPE 374
E+P + LV++LV+GGELFDRIVEKG+Y+E+DA+ ++Q+L+AV YLH GIVHRDLKPE
Sbjct: 109 ETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPE 168
Query: 375 NLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIG 554
NLLY + ++ + I+DFGLSK+ +M T CGTPGY APE+L Y VD WS+G
Sbjct: 169 NLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVG 228
Query: 555 VIAYILLCGYPPFYDE-NDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKR 731
+I YILLCG+ PFYDE D +F +IL EY F SP+WD++S +AKD +R L+ DP KR
Sbjct: 229 IITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKR 288
Query: 732 YTCEQAARHPWIAG--------DTALSK----NIHESVSAQIRKNFAKSKWRQAFNATAV 875
T QA +HPW+ G DTA K N + A ++ A S+ A ++
Sbjct: 289 LTTFQALQHPWVTGKAANFVHMDTAQKKLQEFNARRKLKAAVKAVVASSRLGSASSSHGS 348
Query: 876 VRHMRK 893
++ K
Sbjct: 349 IQESHK 354
>gi|14916455|ref|NP_149117.1| (NM_033126) serine/threonine kinase
PSKH2 [Homo sapiens]
Length = 385
Score = 254 bits (648), Expect = 1e-67
Identities = 128/276 (46%), Positives = 186/276 (67%), Gaps = 4/276 (1%)
Frame = +3
Query: 6 KETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALE 185
K +GTG+FS VV E+K T K FA+K + + +G+E+ + +E++VLR++ H IV L
Sbjct: 66 KALIGTGSFSRVVRVEQKTTKKPFAIKVMETREREGREACV-SELSVLRRVSHRYIVQLM 124
Query: 186 DIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDL 365
+I+E+ + +Y+VM+L +GGELFDR++ +G +TE+DA +++ V D + YLH + I HR+L
Sbjct: 125 EIFETEDQVYMVMELATGGELFDRLIAQGSFTERDAVRILQMVADGIRYLHALQITHRNL 184
Query: 366 KPENLLYYSQDEESKIMISDFGLSKMEGK-GD-VMSTACGTPGYVAPEVLAQKPYSKAVD 539
KPENLLYY EESKI+I+DFGL+ K GD M T CGTP Y+APEVL +KPY+ AVD
Sbjct: 185 KPENLLYYHPGEESKILITDFGLAYSGKKSGDWTMKTLCGTPEYIAPEVLLRKPYTSAVD 244
Query: 540 CWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKD 719
W++GVI Y LL G+ PF DE+ ++L+ +ILK +Y + W IS AKDFI L+ +
Sbjct: 245 MWALGVITYALLSGFLPFDDESQTRLYRKILKGKYNYTGEPWPSISHLAKDFIDKLLILE 304
Query: 720 PNKRYTCEQAARHPWIAGDTALS--KNIHESVSAQI 821
R + QA HPW+ A S KN+ ++S +
Sbjct: 305 AGHRMSAGQALDHPWVITMAAGSSMKNLQRAISRNL 340
>gi|4758128|ref|NP_004725.1| (NM_004734) doublecortin and CaM
kinase-like 1; doublecortin-like kinase [Homo sapiens]
Length = 729
Score = 252 bits (643), Expect = 4e-67
Identities = 127/278 (45%), Positives = 182/278 (64%), Gaps = 4/278 (1%)
Frame = +3
Query: 12 TLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDI 191
T+G G F+ V E++T + +A+K I K +GKE I+NE+++LR++KH NIV L +
Sbjct: 395 TIGDGNFAVVKECVERSTAREYALKIIKKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEE 454
Query: 192 YESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKP 371
+ P LYLVM+LV GG+LFD I YTE+DAS ++ + A+ YLH + IVHRD+KP
Sbjct: 455 MDVPTELYLVMELVKGGDLFDAITSTNKYTERDASGMLYNLASAIKYLHSLNIVHRDIKP 514
Query: 372 ENLLYYS-QDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWS 548
ENLL Y QD + + DFGL+ + + T CGTP YVAPE++A+ Y VD W+
Sbjct: 515 ENLLVYEHQDGSKSLKLGDFGLATI--VDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWA 572
Query: 549 IGVIAYILLCGYPPFYDENDSK--LFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 722
GVI YILLCG+PPF D + LF+QIL + +F SPYWD++SDSAK+ I ++ D
Sbjct: 573 AGVITYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELITMMLLVDV 632
Query: 723 NKRYTCEQAARHPWIAGDTALSKNIHE-SVSAQIRKNF 833
++R++ Q HPW+ D L +N H+ SV+ +I+K+F
Sbjct: 633 DQRFSAVQVLEHPWV-NDDGLPENEHQLSVAGKIKKHF 669
>gi|22749267|ref|NP_689832.1| (NM_152619) hypothetical protein
MGC45428 [Homo sapiens]
Length = 695
Score = 246 bits (628), Expect = 2e-65
Identities = 125/293 (42%), Positives = 186/293 (62%), Gaps = 4/293 (1%)
Frame = +3
Query: 9 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALED 188
+ +G G F+ V +++TGK FA+K I K GKE IENE+++LR++KH NI+ L +
Sbjct: 397 KVIGDGNFAVVKECIDRSTGKEFALKIIDKAKCCGKEHLIENEVSILRRVKHPNIIMLVE 456
Query: 189 IYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLK 368
E+ L+LVM+LV GG+LFD I YTE+D S ++ + +A+ YLH + IVHRD+K
Sbjct: 457 EMETATELFLVMELVKGGDLFDAITSSTKYTERDGSAMVYNLANALRYLHGLSIVHRDIK 516
Query: 369 PENLLYYSQDEESK-IMISDFGLSK-MEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDC 542
PENLL + +K + + DFGL+ +EG + T CGTP YVAPE++A+ Y VD
Sbjct: 517 PENLLVCEYPDGTKSLKLGDFGLATVVEGP---LYTVCGTPTYVAPEIIAETGYGLKVDI 573
Query: 543 WSIGVIAYILLCGYPPFYDEND--SKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEK 716
W+ GVI YILLCG+PPF EN+ LF+QIL + EF +PYWD+I+DSAK+ I +++
Sbjct: 574 WAAGVITYILLCGFPPFRSENNLQEDLFDQILAGKLEFPAPYWDNITDSAKELISQMLQV 633
Query: 717 DPNKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNFAKSKWRQAFNATAV 875
+ R T Q HPW++ D + N+ V+ +++++F + +Q T V
Sbjct: 634 NVEARCTAGQILSHPWVSDDASQENNMQAEVTGKLKQHFNNALPKQNSTTTGV 686
Database: RefSeq (Homo Sapiens/Amino Acid)
Posted date: Jul 1, 2003 6:07 AM
Number of letters in database: 10,046,356
Number of sequences in database: 19,244
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25404187
Number of Sequences: 19244
Number of extensions: 663154
Number of successful extensions: 4066
Number of sequences better than 10.0: 590
Number of HSP's better than 10.0 without gapping: 2138
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 493
Number of HSP's gapped (non-prelim): 2693
length of query: 399
length of database: 10,046,356
effective HSP length: 47
effective length of query: 351
effective length of database: 9,141,888
effective search space: 3208802688
effective search space used: 3208802688
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search to RefSeq (Mouse) database
Query= 20030531C-001983 (20030531C-001983) 20030531C-001983
(1197 letters)
Database: RefSeq (Mus Musculus/Amino Acid)
15,330 sequences; 7,155,815 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|28893481|ref|NP_796317.1| (NM_177343) calcium/calmodulin-dep... 624 e-179
Alignment gi|19527140|ref|NP_598687.1| (NM_133926) calcium/calmodulin-dep... 526 e-150
Alignment gi|21450191|ref|NP_659066.1| (NM_144817) calcium/calmodulin-dep... 461 e-130
Alignment gi|6753248|ref|NP_036170.1| (NM_012040) pregnancy upregulated n... 437 e-123
Alignment gi|21704242|ref|NP_663596.1| (NM_145621) similar to vesicle-ass... 290 1e-78
Alignment gi|27734116|ref|NP_775608.1| (NM_173432) hypothetical protein E... 282 2e-76
Alignment gi|6753252|ref|NP_033923.1| (NM_009793) calcium/calmodulin-depe... 266 1e-71
Alignment gi|9910164|ref|NP_064362.1| (NM_019978) double cortin and calci... 250 1e-66
Alignment gi|27754020|ref|NP_081815.2| (NM_027539) RIKEN cDNA 6330415M09 ... 244 6e-65
Alignment gi|28916677|ref|NP_803126.1| (NM_177407) calcium/calmodulin-dep... 244 8e-65
>gi|28893481|ref|NP_796317.1| (NM_177343) calcium/calmodulin-dependent
protein kinase 1D [Mus musculus]
Length = 385
Score = 624 bits (1608), Expect = e-179
Identities = 309/333 (92%), Positives = 311/333 (92%)
Frame = +3
Query: 3 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 182
FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL
Sbjct: 25 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 84
Query: 183 EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRD 362
EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRD
Sbjct: 85 EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRD 144
Query: 363 LKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDC 542
LKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDC
Sbjct: 145 LKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDC 204
Query: 543 WSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 722
WSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP
Sbjct: 205 WSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 264
Query: 723 NKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRKLHX 902
NKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMR+L
Sbjct: 265 NKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRRLQL 324
Query: 903 XXXXXXXXXXXXXXXXXXXQKDCRAPSTLCSFM 1001
QKDC APSTLCSF+
Sbjct: 325 GSNLDSSNASVSSNLSLASQKDCLAPSTLCSFL 357
>gi|19527140|ref|NP_598687.1| (NM_133926)
calcium/calmodulin-dependent protein kinase I; DNA
segment, Chr 6, ERATO Doi 263, expressed [Mus musculus]
Length = 374
Score = 526 bits (1355), Expect = e-150
Identities = 256/298 (85%), Positives = 276/298 (91%)
Frame = +3
Query: 3 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 182
F++ LGTGAFSEV+LAE+K T KL A+KCI KKAL+GKE S+ENEIAVL KIKH NIVAL
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVAL 81
Query: 183 EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRD 362
+DIYES HLYL+MQLVSGGELFDRIVEKGFYTE+DAS LI QVLDAV YLH +GIVHRD
Sbjct: 82 DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRD 141
Query: 363 LKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDC 542
LKPENLLYYS DE+SKIMISDFGLSKME G V+STACGTPGYVAPEVLAQKPYSKAVDC
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDC 201
Query: 543 WSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 722
WSIGVIAYILLCGYPPFYDEND+KLFEQILKAEYEFDSPYWDDISDSAKDFIR+LMEKDP
Sbjct: 202 WSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDP 261
Query: 723 NKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRKL 896
KR+TCEQA +HPWIAGDTAL KNIH+SVS QI+KNFAKSKW+QAFNATAVVRHMRKL
Sbjct: 262 EKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNATAVVRHMRKL 319
>gi|21450191|ref|NP_659066.1| (NM_144817)
calcium/calmodulin-dependent protein kinase I gamma [Mus
musculus]
Length = 477
Score = 461 bits (1187), Expect = e-130
Identities = 227/299 (75%), Positives = 261/299 (86%)
Frame = +3
Query: 3 FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVAL 182
F E LG+GAFSEV L +++ TGKLFA+KCI KK+ ++SS+ENEIAVL++IKHENIV L
Sbjct: 25 FMEVLGSGAFSEVFLVKQRVTGKLFALKCI-KKSPAFRDSSLENEIAVLKRIKHENIVTL 83
Query: 183 EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRD 362
EDIYES H YLVMQLVSGGELFDRI+E+G YTEKDAS +I+QVL AV YLH GIVHRD
Sbjct: 84 EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRD 143
Query: 363 LKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDC 542
LKPENLLY + +E SKIMI+DFGLSKME G VMSTACGTPGYVAPEVLAQKPYSKAVDC
Sbjct: 144 LKPENLLYLTPEENSKIMITDFGLSKMEQNG-VMSTACGTPGYVAPEVLAQKPYSKAVDC 202
Query: 543 WSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 722
WSIGVI YILLCGYPPFY+E +SKLFE+I + YEF+SP+WDDIS+SAKDFI +L+EKDP
Sbjct: 203 WSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDP 262
Query: 723 NKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRKLH 899
N+RYTCE+A RHPWI G+TAL ++I+ SVS QI+KNFAKSKWRQAFNA AVV HMRKLH
Sbjct: 263 NERYTCEKALRHPWIDGNTALHRDIYPSVSLQIQKNFAKSKWRQAFNAAAVVHHMRKLH 321
>gi|6753248|ref|NP_036170.1| (NM_012040) pregnancy upregulated
non-ubiquitously expressed CaM kinase;
calcium/calmodulin-dependent protein kinase 1, beta [Mus
musculus]
Length = 343
Score = 437 bits (1124), Expect = e-123
Identities = 205/297 (69%), Positives = 259/297 (87%)
Frame = +3
Query: 6 KETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALE 185
+E LG+GAFSEV+LA+E+ + L A+KCIPKKAL+GKE+ +ENEIAVLR+I H NIVALE
Sbjct: 18 REKLGSGAFSEVMLAQERGSAHLVALKCIPKKALRGKEALVENEIAVLRRISHPNIVALE 77
Query: 186 DIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDL 365
D++ESP+HLYL M+LV+GGELFDRI+E+G YTEKDAS L+ QVL AV YLH +GIVHRDL
Sbjct: 78 DVHESPSHLYLAMELVTGGELFDRIMERGSYTEKDASHLVGQVLGAVSYLHSLGIVHRDL 137
Query: 366 KPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCW 545
KPENLLY + E+SKIM+SDFGLSK++ G+++ TACGTPGYVAPE+L QKPY KAVD W
Sbjct: 138 KPENLLYATPFEDSKIMVSDFGLSKIQA-GNMLGTACGTPGYVAPELLEQKPYGKAVDVW 196
Query: 546 SIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPN 725
++GVI+YILLCGYPPFYDE+D +LF QIL+A YEFDSP+WDDIS+SAKDFIR+L+E+DP
Sbjct: 197 ALGVISYILLCGYPPFYDESDPELFSQILRASYEFDSPFWDDISESAKDFIRHLLERDPQ 256
Query: 726 KRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNFAKSKWRQAFNATAVVRHMRKL 896
KR+TC+QA +H WI+GD A ++I SVS QI+KNFA++ W++AFNAT+ +RH+RKL
Sbjct: 257 KRFTCQQALQHLWISGDAAFDRDILGSVSEQIQKNFARTHWKRAFNATSFLRHIRKL 313
>gi|21704242|ref|NP_663596.1| (NM_145621) similar to
vesicle-associated calmodulin-binding protein [Mus
musculus]
Length = 512
Score = 290 bits (741), Expect = 1e-78
Identities = 138/302 (45%), Positives = 207/302 (67%), Gaps = 8/302 (2%)
Frame = +3
Query: 9 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALED 188
+ + T F E+ A++K TGKL K K+ + + +NEI +L+ +KH NI+ L D
Sbjct: 28 QVIKTEEFCEIFRAKDKTTGKLHTCKKFQKRDGRKVRKAAKNEIGILKMVKHPNILQLVD 87
Query: 189 IYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLK 368
++ + ++ ++L +G E+FD I+++G+Y+E+D S ++RQVL+AV YLH + IVHR+LK
Sbjct: 88 VFVTRKEYFIFLELATGREVFDWILDQGYYSERDTSNVVRQVLEAVAYLHSLKIVHRNLK 147
Query: 369 PENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWS 548
ENL+YY++ + SKI+ISDF L+K+E ++ CGTP Y+APEV+ ++ Y + VDCW+
Sbjct: 148 LENLVYYNRLKNSKIVISDFHLAKLE--NGLIKEPCGTPEYLAPEVVGRQRYGRPVDCWA 205
Query: 549 IGVIAYILLCGYPPFYDE--------NDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRN 704
IGVI YILL G PPFY+E +D LF +IL +YEFDSPYWDDIS +AKD +
Sbjct: 206 IGVIMYILLSGNPPFYEEVEEDDYENHDKNLFRKILAGDYEFDSPYWDDISQAAKDLVTR 265
Query: 705 LMEKDPNKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNFAKSKWRQAFNATAVVRH 884
LME + ++R T E+A H WI+G+ A KNI + V AQI KNFA++KW++A T +++
Sbjct: 266 LMEVEQDQRITAEEAISHEWISGNAASDKNIKDGVCAQIEKNFARAKWKKAVRVTTLMKR 325
Query: 885 MR 890
+R
Sbjct: 326 LR 327
>gi|27734116|ref|NP_775608.1| (NM_173432) hypothetical protein
E130013P03 [Mus musculus]
Length = 424
Score = 282 bits (722), Expect = 2e-76
Identities = 138/278 (49%), Positives = 193/278 (68%), Gaps = 4/278 (1%)
Frame = +3
Query: 6 KETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALE 185
K +G G+FS VV E +AT + +A+K I K +G+E E+E+ VLR+++H NI+ L
Sbjct: 101 KALIGRGSFSRVVRVEHRATRQPYAIKMIETKYREGREVC-ESELRVLRRVRHANIIQLV 159
Query: 186 DIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDL 365
+++E+ +Y+VM+L +GGELFDRI+ KG +TE+DA+ +++ VLD V YLH +GI HRDL
Sbjct: 160 EVFETQERVYMVMELATGGELFDRIIAKGSFTERDATRVLQMVLDGVRYLHALGITHRDL 219
Query: 366 KPENLLYYSQDEESKIMISDFGLSKMEGKGD--VMSTACGTPGYVAPEVLAQKPYSKAVD 539
KPENLLYY +SKI+I+DFGL+ KGD +M T CGTP Y+APEVL +KPY+ +VD
Sbjct: 220 KPENLLYYHPGTDSKIIITDFGLASARKKGDDCLMKTTCGTPEYIAPEVLVRKPYTNSVD 279
Query: 540 CWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKD 719
W++GVIAYILL G PF D+N ++L+ QIL+ +Y + W +S+ AKDFI L+ D
Sbjct: 280 MWALGVIAYILLSGTMPFEDDNRTRLYRQILRGKYSYLGEPWPSVSNLAKDFIDRLLTVD 339
Query: 720 PNKRYTCEQAARHPWIAGDTALS--KNIHESVSAQIRK 827
P R T QA RHPW+ A S KN+H S+S + K
Sbjct: 340 PGARMTALQALRHPWVVSMAASSSMKNLHRSISQNLLK 377
>gi|6753252|ref|NP_033923.1| (NM_009793)
calcium/calmodulin-dependent protein kinase IV;
Ca2+/calmodulin-dependent protein kinase type IV/Gr [Mus
musculus]
Length = 469
Score = 266 bits (681), Expect = 1e-71
Identities = 139/306 (45%), Positives = 193/306 (62%), Gaps = 13/306 (4%)
Frame = +3
Query: 15 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIY 194
LG GA S V ++K T K +A+K + K K + EI VL ++ H NI+ L++I+
Sbjct: 48 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDK---KIVRTEIGVLLRLSHPNIIKLKEIF 104
Query: 195 ESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPE 374
E+P + LV++LV+GGELFDRIVEKG+Y+E+DA ++Q+L+AV YLH GIVHRDLKPE
Sbjct: 105 ETPTEISLVLELVTGGELFDRIVEKGYYSERDARDAVKQILEAVAYLHENGIVHRDLKPE 164
Query: 375 NLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIG 554
NLLY + ++ + I+DFGLSK+ +M T CGTPGY APE+L Y VD WS+G
Sbjct: 165 NLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVG 224
Query: 555 VIAYILLCGYPPFYDE-NDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKR 731
+I YILLCG+ PFYDE D +F +IL EY F SP+WD++S +AKD ++ L+ DP KR
Sbjct: 225 IITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVKKLIVLDPKKR 284
Query: 732 YTCEQAARHPWIAG--------DTALSK----NIHESVSAQIRKNFAKSKWRQAFNATAV 875
T QA +HPW+ G DTA K N + A ++ A S+ A ++
Sbjct: 285 LTTFQALQHPWVTGKAANFVHMDTAQKKLQEFNARRKLKAAVKAVVASSRLGSASSSHTS 344
Query: 876 VRHMRK 893
++ K
Sbjct: 345 IQENHK 350
>gi|9910164|ref|NP_064362.1| (NM_019978) double cortin and
calcium/calmodulin-dependent protein kinase-like 1;
doublecortin-like kinase [Mus musculus]
Length = 756
Score = 250 bits (638), Expect = 1e-66
Identities = 126/278 (45%), Positives = 182/278 (65%), Gaps = 4/278 (1%)
Frame = +3
Query: 12 TLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDI 191
T+G G F+ V E++T + +A+K I K +GKE I+NE+++LR++KH NIV L +
Sbjct: 411 TIGDGNFAVVKECIERSTAREYALKIIKKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEE 470
Query: 192 YESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKP 371
+ P LYLVM+LV GG+LFD I YTE+DAS ++ + A+ YLH + IVHRD+KP
Sbjct: 471 MDVPTELYLVMELVKGGDLFDAITSTSKYTERDASGMLYNLASAIKYLHSLNIVHRDIKP 530
Query: 372 ENLLYYS-QDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWS 548
ENLL Y QD + + DFGL+ + + T CGTP YVAPE++A+ Y VD W+
Sbjct: 531 ENLLVYEHQDGSKSLKLGDFGLATI--VDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWA 588
Query: 549 IGVIAYILLCGYPPFYDENDSK--LFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 722
GVI YILLCG+PPF D + LF+QIL + +F SPYWD++SDSAK+ I ++ +
Sbjct: 589 AGVITYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELINMMLLVNV 648
Query: 723 NKRYTCEQAARHPWIAGDTALSKNIHE-SVSAQIRKNF 833
++R++ Q HPW+ D L +N H+ SV+ +I+K+F
Sbjct: 649 DQRFSAVQVLEHPWV-NDDGLPENEHQLSVAGKIKKHF 685
>gi|27754020|ref|NP_081815.2| (NM_027539) RIKEN cDNA 6330415M09 [Mus
musculus]
Length = 755
Score = 244 bits (623), Expect = 6e-65
Identities = 124/293 (42%), Positives = 185/293 (62%), Gaps = 4/293 (1%)
Frame = +3
Query: 9 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALED 188
+ +G G F+ V ++ TGK FA+K I K GKE IENE+++LR++KH NI+ L +
Sbjct: 396 KVIGDGNFAVVKECVDRYTGKEFALKIIDKAKCCGKEHLIENEVSILRRVKHPNIIMLVE 455
Query: 189 IYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLK 368
E+ L+LVM+LV GG+LFD I YTE+D S ++ + +A+ YLH + IVHRD+K
Sbjct: 456 EMETATDLFLVMELVKGGDLFDAITSSTKYTERDGSAMVYNLANALRYLHSLSIVHRDIK 515
Query: 369 PENLLYYSQDEESK-IMISDFGLSK-MEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDC 542
PENLL + +K + + DFGL+ +EG + T CGTP YVAPE++A+ Y VD
Sbjct: 516 PENLLVCEYPDGTKSLKLGDFGLATVVEGP---LYTVCGTPTYVAPEIIAETGYGLKVDV 572
Query: 543 WSIGVIAYILLCGYPPFYDEND--SKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEK 716
W+ GVI YILLCG+PPF EN+ LF+QIL + EF +PYWD+I+DSAK+ I +++
Sbjct: 573 WAAGVITYILLCGFPPFRSENNLQEDLFDQILAGKLEFPAPYWDNITDSAKELISQMLQV 632
Query: 717 DPNKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNFAKSKWRQAFNATAV 875
+ R T + HPW++ D + N+ V+ +++++F + +Q T V
Sbjct: 633 NVEARCTAGEILSHPWVSDDASQENNMQAEVTGKLKQHFNNALPKQNSTTTGV 685
>gi|28916677|ref|NP_803126.1| (NM_177407)
calcium/calmodulin-dependent protein kinase II alpha;
CaMK II; alpha-CaMKII [Mus musculus]
Length = 478
Score = 244 bits (622), Expect = 8e-65
Identities = 125/290 (43%), Positives = 181/290 (62%), Gaps = 3/290 (1%)
Frame = +3
Query: 9 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKE-SSIENEIAVLRKIKHENIVALE 185
E LG GAFS V + G+ +A K I K L ++ +E E + R +KH NIV L
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 76
Query: 186 DIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDL 365
D H YL+ LV+GGELF+ IV + +Y+E DAS I+Q+L+AV + H+MG+VHRDL
Sbjct: 77 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDL 136
Query: 366 KPENLLYYSQDEESKIMISDFGLS-KMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDC 542
KPENLL S+ + + + ++DFGL+ ++EG+ GTPGY++PEVL + PY K VD
Sbjct: 137 KPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDL 196
Query: 543 WSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDP 722
W+ GVI YILL GYPPF+DE+ +L++QI Y+F SP WD ++ AKD I ++ +P
Sbjct: 197 WACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINP 256
Query: 723 NKRYTCEQAARHPWIAGDTALSKNIHESVSAQIRKNF-AKSKWRQAFNAT 869
+KR T +A +HPWI+ + ++ +H + K F A+ K + A T
Sbjct: 257 SKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTT 306
Database: RefSeq (Mus Musculus/Amino Acid)
Posted date: Jul 1, 2003 6:07 AM
Number of letters in database: 7,155,815
Number of sequences in database: 15,330
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17966909
Number of Sequences: 15330
Number of extensions: 464086
Number of successful extensions: 2710
Number of sequences better than 10.0: 388
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 347
Number of HSP's gapped (non-prelim): 1778
length of query: 399
length of database: 7,155,815
effective HSP length: 47
effective length of query: 351
effective length of database: 6,435,305
effective search space: 2258792055
effective search space used: 2258792055
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)