Search to RefSeq (Human) database
Query= 20030531C-003184 (20030531C-003184) 20030531C-003184
(2483 letters)
Database: RefSeq (Homo Sapiens/Amino Acid)
19,244 sequences; 10,046,356 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|10835183|ref|NP_000620.1| (NM_000629) interferon (alpha, bet... 701 0.0
Alignment gi|24430215|ref|NP_000619.3| (NM_000628) interleukin 10 recepto... 87 6e-17
Alignment gi|31083156|ref|NP_055247.2| (NM_014432) interleukin 20 recepto... 72 2e-12
Alignment gi|5031783|ref|NP_005525.1| (NM_005534) interferon gamma recept... 52 2e-06
Alignment gi|16418459|ref|NP_443194.1| (NM_052962) interleukin 22-binding... 52 2e-06
Alignment gi|31317241|ref|NP_851826.1| (NM_181309) interleukin 22-binding... 52 2e-06
Alignment gi|4503641|ref|NP_001984.1| (NM_001993) coagulation factor III ... 51 4e-06
Alignment gi|4557880|ref|NP_000407.1| (NM_000416) interferon gamma recept... 45 2e-04
Alignment gi|28416911|ref|NP_775088.1| (NM_173065) interleukin 28 recepto... 44 6e-04
Alignment gi|28416909|ref|NP_775087.1| (NM_173064) interleukin 28 recepto... 44 6e-04
>gi|10835183|ref|NP_000620.1| (NM_000629) interferon (alpha, beta and
omega) receptor 1; human interferon-alpha receptor
(HuIFN-alpha-Rec) [Homo sapiens]
Length = 557
Score = 701 bits (1810), Expect = 0.0
Identities = 351/556 (63%), Positives = 426/556 (76%), Gaps = 2/556 (0%)
Frame = +1
Query: 136 MLGFLGATTLMLVAGAPWVLPA--GGADLRSPENVVVSIIDDNFILKWKXXXXXXXXXXX 309
M+ LGATTL+LVA PWVL A GG +L+SP+ V V IIDDNFIL+W
Sbjct: 2 MVVLLGATTLVLVAVGPWVLSAAAGGKNLKSPQKVEVDIIDDNFILRWNRSDESVGNVTF 61
Query: 310 XADYQITGMDNWIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEP 489
DYQ TGMDNWIKL GCQ +TST+CNFSS+KL +VYE+IKLRIRAE N TS WYEV+
Sbjct: 62 SFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKL-NVYEEIKLRIRAEKEN-TSSWYEVDS 119
Query: 490 FIPFQEAQIGPPDVHLEAEDKAIIINLSPPGTKNSVMWAMDSSSFVYSLVIWKNSSSLEE 669
F PF++AQIGPP+VHLEAEDKAI+I++SP GTK+SVMWA+D SF YSL+IWKNSS +EE
Sbjct: 120 FTPFRKAQIGPPEVHLEAEDKAIVIHISP-GTKDSVMWALDGLSFTYSLLIWKNSSGVEE 178
Query: 670 RTKTVYARDKIHQLSPETTYCLKVKAGLRSPRKVGVYSPVYCINTTVKHHLPSPENLEIN 849
R + +Y+R KI++LSPETTYCLKVKA L + K+GVYSPV+CI TTV++ LP PEN+E++
Sbjct: 179 RIENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVS 238
Query: 850 AENRVYVLKWNYTYENVTFQAQWLHAFLKKIPEDHSDKWKQIPNCENVKTTHCVFPQNVF 1029
+N+ YVLKW+YTY N+TFQ QWLHAFLK+ P +H KWKQIP+CENVKTT CVFPQNVF
Sbjct: 239 VQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVF 298
Query: 1030 TKGIFFIRVQASNGNSTSLWSEEKRFNTEMQTILFPPVINMKPINDASLRVGIGAPKESE 1209
KGI+ +RVQAS+GN+TS WSEE +F+TE+Q L PPV N++ ++D S + IGAPK+S
Sbjct: 299 QKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPVFNIRSLSD-SFHIYIGAPKQSG 357
Query: 1210 DKSVNQLYPLIYEVIFRENTSDTERDVLEKRTDFTFSNLKPLTVYCVKARALIENDRWNR 1389
+ V Q YPLIYE+IF ENTS+ ER ++EK+TD T NLKPLTVYCVKARA +++ N+
Sbjct: 358 NTPVIQDYPLIYEIIFWENTSNAERKIIEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNK 417
Query: 1390 SSVFSDTVCEKTKPGSTSQAWLIAGILSAILLFPAVFYGVKVVSRCINYVFFPSSKPPST 1569
SSVFSD VCEKTKPG+TS+ WLI GI A+ P V Y KV RCINYVFFPS KP S+
Sbjct: 418 SSVFSDAVCEKTKPGNTSKIWLIVGICIALFALPFVIYAAKVFLRCINYVFFPSLKPSSS 477
Query: 1570 IDEYFAEQPLKNLLLSTSEEQTEICFIVXXXXXXXXXXXXXXXXXXHSRCSSQTNRDSGV 1749
IDEYF+EQPLKNLLLSTSEEQ E CFI+ H + SSQT++DSG
Sbjct: 478 IDEYFSEQPLKNLLLSTSEEQIEKCFIIENISTIATVEETNQTDEDHKKYSSQTSQDSGN 537
Query: 1750 YSNEDENSGSKIGEEI 1797
YSNEDE S SK EE+
Sbjct: 538 YSNEDE-SESKTSEEL 552
>gi|24430215|ref|NP_000619.3| (NM_000628) interleukin 10 receptor,
beta precursor; cytokine receptor family II, member 4;
cytokine receptor class-II CRF2-4 [Homo sapiens]
Length = 325
Score = 86.7 bits (213), Expect = 6e-17
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 3/205 (1%)
Frame = +1
Query: 223 PENVVVSIIDDNFILKWKXXXXXXXXXXXXADYQITGMDNWIKLPGCQYVTSTECNFSSI 402
PENV ++ ++ IL+W+ A Y + I C T TEC+FSS+
Sbjct: 24 PENVRMNSVNFKNILQWESPAFAKGNLTFTAQY----LSYRIFQDKCMNTTLTECDFSSL 79
Query: 403 KLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQEAQIGPPDVHLEAEDKAIIINLSPPG 582
S Y LR+RAE + S W + F P + IGPP + +E ++ + P
Sbjct: 80 ---SKYGDHTLRVRAEFADEHSDWVNIT-FCPVDDTIIGPPGMQVEVLADSLHMRFLAPK 135
Query: 583 TKNSV-MWAMDS--SSFVYSLVIWKNSSSLEERTKTVYARDKIHQLSPETTYCLKVKAGL 753
+N W M + +S+ Y++ WKN + + + Y + + L P TTYC++V+ L
Sbjct: 136 IENEYETWTMKNVYNSWTYNVQYWKNGTDEKFQITPQYDFEVLRNLEPWTTYCVQVRGFL 195
Query: 754 RSPRKVGVYSPVYCINTTVKHHLPS 828
K G +S C TT +PS
Sbjct: 196 PDRNKAGEWSEPVCEQTTHDETVPS 220
Score = 80.9 bits (198), Expect = 4e-15
Identities = 80/286 (27%), Positives = 130/286 (44%), Gaps = 12/286 (4%)
Frame = +1
Query: 793 CINTTVKHHLPSPENLEINAENRVYVLKWN---YTYENVTFQAQWLHAFLKKIPEDHSDK 963
C+ + +P PEN+ +N+ N +L+W + N+TF AQ+L +I +D
Sbjct: 12 CLLVSALGMVPPPENVRMNSVNFKNILQWESPAFAKGNLTFTAQYLSY---RIFQD---- 64
Query: 964 WKQIPNCENVKTTHCVFPQNVFTKGIFFIRVQASNGNSTSLWSEEKRFNTEMQTILFPPV 1143
C N T C F ++ G +RV+A + S W F TI+ PP
Sbjct: 65 -----KCMNTTLTECDF-SSLSKYGDHTLRVRAEFADEHSDWVNIT-FCPVDDTIIGPPG 117
Query: 1144 INMKPINDASLRVGIGAPK---ESEDKSVNQLY-PLIYEVIFRENTSDTERDVLEKRTDF 1311
+ ++ + D SL + APK E E ++ +Y Y V + +N +D + + +
Sbjct: 118 MQVEVLAD-SLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKNGTDEKFQITPQYDFE 176
Query: 1312 TFSNLKPLTVYCVKARALIENDRWNRSSVFSDTVCEKTKPGSTSQAWLIAGILSA-ILLF 1488
NL+P T YCV+ R + DR N++ +S+ VCE+T T +W++A IL A + +
Sbjct: 177 VLRNLEPWTTYCVQVRGFLP-DR-NKAGEWSEPVCEQTTHDETVPSWMVAVILMASVFMV 234
Query: 1489 PAVFYGVKVVSRCI----NYVFFPSSKPPSTIDEYFAEQPLKNLLL 1614
G + C+ Y F P + P + E F P N LL
Sbjct: 235 CLALLGCFALLWCVYKKTKYAFSPRNSLPQHLKE-FLGHPHHNTLL 279
>gi|31083156|ref|NP_055247.2| (NM_014432) interleukin 20 receptor,
alpha; class II cytokine receptor ZCYTOR7 [Homo sapiens]
Length = 553
Score = 71.6 bits (174), Expect = 2e-12
Identities = 57/224 (25%), Positives = 95/224 (41%), Gaps = 10/224 (4%)
Frame = +1
Query: 163 LMLVAGAPW--VLPAGGADLRSPENVVVSIIDDNFILKWKX-XXXXXXXXXXXADYQITG 333
L+L+ APW +P L P N+ I+ +L+W Y I G
Sbjct: 18 LLLLLAAPWGRAVPCVSGGLPKPANITFLSINMKNVLQWTPPEGLQGVKVTYTVQYFIYG 77
Query: 334 MDNWIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQEAQ 513
W+ C+ + T C+ S+ + + +++A G S W E F PF E Q
Sbjct: 78 QKKWLNKSECRNINRTYCDLSA-ETSDYEHQYYAKVKAIWGTKCSKWAESGRFYPFLETQ 136
Query: 514 IGPPDVHLEAEDKAIIINLSPPGT-KNSVMWAMDSSSFVYSLVIWKNSSSLEERTKTVYA 690
IGPP+V L ++K+I + L+ P K + S +YS + + N S L ++ ++
Sbjct: 137 IGPPEVALTTDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKY-NVSVLNTKSNRTWS 195
Query: 691 RDKIHQ------LSPETTYCLKVKAGLRSPRKVGVYSPVYCINT 804
+ + L P T YC+ V++ + P + S C T
Sbjct: 196 QCVTNHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCART 239
Score = 54.3 bits (129), Expect = 4e-07
Identities = 59/269 (21%), Positives = 105/269 (38%), Gaps = 18/269 (6%)
Frame = +1
Query: 820 LPSPENLEINAENRVYVLKWN----YTYENVTFQAQWLHAFLKKIPEDHSDKWKQIPNCE 987
LP P N+ + N VL+W VT+ Q+ KK W C
Sbjct: 37 LPKPANITFLSINMKNVLQWTPPEGLQGVKVTYTVQYFIYGQKK--------WLNKSECR 88
Query: 988 NVKTTHC-VFPQNVFTKGIFFIRVQASNGNSTSLWSEEKRFNTEMQTILFPPVINMKPIN 1164
N+ T+C + + + ++ +V+A G S W+E RF ++T + PP + + +
Sbjct: 89 NINRTYCDLSAETSDYEHQYYAKVKAIWGTKCSKWAESGRFYPFLETQIGPPEVAL-TTD 147
Query: 1165 DASLRVGIGAPK------ESEDKSVNQLYP-LIYEVIFRENTSDTERDVLEKRTDFTFSN 1323
+ S+ V + AP+ E S+ Q+Y L Y V S+ +
Sbjct: 148 EKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRTWSQCVTNHTLVLTW 207
Query: 1324 LKPLTVYCVKARALIENDRWNRSSVFSDTVCEKTKPGSTSQ------AWLIAGILSAILL 1485
L+P T+YCV + + R + S+ C +T +S+ W + + + L
Sbjct: 208 LEPNTLYCVHVESFVPGP--PRRAQPSEKQCARTLKDQSSEFKAKIIFWYVLPVSITVFL 265
Query: 1486 FPAVFYGVKVVSRCINYVFFPSSKPPSTI 1572
F + Y + Y+ K P+ +
Sbjct: 266 FSVMGYSI------YRYIHVGKEKHPANL 288
>gi|5031783|ref|NP_005525.1| (NM_005534) interferon gamma receptor 2
(interferon gamma transducer 1); interferon gamma
receptor accessory factor-1; interferon-gamma receptor
beta chain precursor [Homo sapiens]
Length = 337
Score = 52.0 bits (123), Expect = 2e-06
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
Frame = +1
Query: 361 CQYVTSTECNFSSIKLKSVYE---KIKLRIRAETGNSTSPWYEVEPFIPFQEAQIGPPD- 528
C +T+TEC+F++ + + + LR+RAE G S W + F ++ +GPP+
Sbjct: 86 CTQITATECDFTAASPSAGFPMDFNVTLRLRAELGALHSAWVTMPWFQHYRNVTVGPPEN 145
Query: 529 VHLEAEDKAIIINLSPPGTKNSVMWAMDSSSFVYSLVIWKNSSSLEERTKTVYARDKIHQ 708
+ + + ++II S P A F Y + W+ + + +
Sbjct: 146 IEVTPGEGSLIIRFSSPFDIADTSTAF----FCYYVHYWEKGGIQQVKGPFRSNSISLDN 201
Query: 709 LSPETTYCLKVKAGLRSPR----KVGVYSPVYCINT 804
L P YCL+V+A L + +VG S + C T
Sbjct: 202 LKPSRVYCLQVQAQLLWNKSNIFRVGHLSNISCYET 237
Score = 49.7 bits (117), Expect = 9e-06
Identities = 70/314 (22%), Positives = 121/314 (38%), Gaps = 23/314 (7%)
Frame = +1
Query: 769 VGVYSPVYCINTTVKHHLPSPENLEINAENRVYVLKW-----NYTYENVTFQAQWLHAFL 933
+GV++ LP+P++ +I N VL W + + V ++ Q+ +
Sbjct: 13 LGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNSTRPVVYRVQFKYTDS 72
Query: 934 KKIPEDHSDKWKQIPNCENVKTTHCVFPQNVFTKGI-----FFIRVQASNGNSTSLWSEE 1098
K D NC + T C F + G +R++A G S W
Sbjct: 73 KWFTADIMSIGV---NCTQITATECDFTAASPSAGFPMDFNVTLRLRAELGALHSAWVTM 129
Query: 1099 KRFNTEMQTILFPPV-INMKPINDASLRVGIGAPKESEDKSVNQLYPLIYEVIFRENTSD 1275
F + PP I + P + SL + +P + D S Y V + E
Sbjct: 130 PWFQHYRNVTVGPPENIEVTP-GEGSLIIRFSSPFDIADTSTAFF---CYYVHYWEKGGI 185
Query: 1276 TERDVLEKRTDFTFSNLKPLTVYCVKARALIENDRWNRSSVF-----SDTVCEKTKPGST 1440
+ + + NLKP VYC++ +A + WN+S++F S+ C +T ++
Sbjct: 186 QQVKGPFRSNSISLDNLKPSRVYCLQVQAQL---LWNKSNIFRVGHLSNISCYETMADAS 242
Query: 1441 SQAWLI----AGILSAI-LLFPAVFYGVKVVSRCINYVFFPSSKPPSTIDEYFAE--QPL 1599
++ + G S + +L A F+ V I Y F P I+EY + QP+
Sbjct: 243 TELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQIEEYLKDPTQPI 302
Query: 1600 KNLLLSTSEEQTEI 1641
L S + ++
Sbjct: 303 LEALDKDSSPKDDV 316
>gi|16418459|ref|NP_443194.1| (NM_052962) interleukin 22-binding
protein isoform 1; class II cytokine receptor;
interleukin 22-binding protein [Homo sapiens]
Length = 263
Score = 51.6 bits (122), Expect = 2e-06
Identities = 39/140 (27%), Positives = 66/140 (46%), Gaps = 8/140 (5%)
Frame = +1
Query: 961 KWKQIPNCENVKTTHC-VFPQNVFTKGIFFIRVQASNGNSTSLWSEEKRFNTEMQTILFP 1137
+WK +C + C + + + ++ RV+A++ S S WS RF +T + P
Sbjct: 103 QWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWETKIDP 162
Query: 1138 PVINMKPINDASLRVGIGAP------KESEDKSVNQLYPLIYEVIFRENTSDTERDVLE- 1296
PV+N+ +N SL V + AP ++ ++ S+ Y L+Y V N+ + E+ V E
Sbjct: 163 PVMNITQVN-GSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKEQKVYEG 221
Query: 1297 KRTDFTFSNLKPLTVYCVKA 1356
L P + YCV A
Sbjct: 222 AHRAVEIEALTPHSSYCVVA 241
Score = 45.4 bits (106), Expect = 2e-04
Identities = 32/141 (22%), Positives = 60/141 (41%), Gaps = 6/141 (4%)
Frame = +1
Query: 331 GMDNWIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQEA 510
G W C C+ +S + + E R+RA + S S W F P+ E
Sbjct: 100 GQRQWKNKEDCWGTQELSCDLTS-ETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWET 158
Query: 511 QIGPPDVHLEAEDKAIIINLSPPG-----TKNSVMWAMDSSSFVYSLVIWKNSSSLEERT 675
+I PP +++ + ++++ L P K + D +Y + I NS E++
Sbjct: 159 KIDPPVMNITQVNGSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKEQKV 218
Query: 676 -KTVYARDKIHQLSPETTYCL 735
+ + +I L+P ++YC+
Sbjct: 219 YEGAHRAVEIEALTPHSSYCV 239
>gi|31317241|ref|NP_851826.1| (NM_181309) interleukin 22-binding
protein isoform 2; class II cytokine receptor;
interleukin 22-binding protein [Homo sapiens]
Length = 231
Score = 51.6 bits (122), Expect = 2e-06
Identities = 39/140 (27%), Positives = 66/140 (46%), Gaps = 8/140 (5%)
Frame = +1
Query: 961 KWKQIPNCENVKTTHC-VFPQNVFTKGIFFIRVQASNGNSTSLWSEEKRFNTEMQTILFP 1137
+WK +C + C + + + ++ RV+A++ S S WS RF +T + P
Sbjct: 71 QWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWETKIDP 130
Query: 1138 PVINMKPINDASLRVGIGAP------KESEDKSVNQLYPLIYEVIFRENTSDTERDVLE- 1296
PV+N+ +N SL V + AP ++ ++ S+ Y L+Y V N+ + E+ V E
Sbjct: 131 PVMNITQVN-GSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKEQKVYEG 189
Query: 1297 KRTDFTFSNLKPLTVYCVKA 1356
L P + YCV A
Sbjct: 190 AHRAVEIEALTPHSSYCVVA 209
Score = 51.2 bits (121), Expect = 3e-06
Identities = 47/206 (22%), Positives = 83/206 (39%), Gaps = 7/206 (3%)
Frame = +1
Query: 139 LGFLGATTLMLVAGAPWVLPAGGADLRSPENVVVSIIDDNFILKWK-XXXXXXXXXXXXA 315
LGFL + L VAG + P+ V + + IL+W+
Sbjct: 8 LGFLISFFLTGVAGTQ-----STHESLKPQRVQFQSRNFHNILQWQPGRALTGNSSVYFV 62
Query: 316 DYQITGMDNWIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPFI 495
Y+I G W C C+ +S + + E R+RA + S S W F
Sbjct: 63 QYKIYGQRQWKNKEDCWGTQELSCDLTS-ETSDIQEPYYGRVRAASAGSYSEWSMTPRFT 121
Query: 496 PFQEAQIGPPDVHLEAEDKAIIINLSPPG-----TKNSVMWAMDSSSFVYSLVIWKNSSS 660
P+ E +I PP +++ + ++++ L P K + D +Y + I NS
Sbjct: 122 PWWETKIDPPVMNITQVNGSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLE 181
Query: 661 LEERT-KTVYARDKIHQLSPETTYCL 735
E++ + + +I L+P ++YC+
Sbjct: 182 KEQKVYEGAHRAVEIEALTPHSSYCV 207
>gi|4503641|ref|NP_001984.1| (NM_001993) coagulation factor III
precursor; Coagulation factor III; CD142 [Homo sapiens]
Length = 295
Score = 50.8 bits (120), Expect = 4e-06
Identities = 43/168 (25%), Positives = 74/168 (43%), Gaps = 22/168 (13%)
Frame = +1
Query: 361 CQYVTSTECNFSSIKLKSVYEKIKLRIRA-------ETGNSTSPWYEVEP-FIPFQEAQI 516
C Y T TEC+ + +K V + R+ + TG++ P YE P F P+ E +
Sbjct: 81 CFYTTDTECDLTDEIVKDVKQTYLARVFSYPAGNVESTGSAGEPLYENSPEFTPYLETNL 140
Query: 517 GPPD----------VHLEAEDKAIIINLSPPGTKNSVMWAMD--SSSFVYSLVIWKNSSS 660
G P V++ ED+ ++ + N+ + D +Y+L WK+SSS
Sbjct: 141 GQPTIQSFEQVGTKVNVTVEDERTLVRRN-----NTFLSLRDVFGKDLIYTLYYWKSSSS 195
Query: 661 LEERTKTVYARDKIHQLSPETTYCLKVKAGL--RSPRKVGVYSPVYCI 798
++ KT + + + YC V+A + R+ + SPV C+
Sbjct: 196 GKKTAKT-NTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECM 242
>gi|4557880|ref|NP_000407.1| (NM_000416) interferon gamma receptor
1; Immune interferon, receptor for [Homo sapiens]
Length = 489
Score = 45.4 bits (106), Expect = 2e-04
Identities = 35/167 (20%), Positives = 76/167 (44%), Gaps = 7/167 (4%)
Frame = +1
Query: 202 GGADLRSPENVVVSIIDDNFILKWKXXXXXXXXXXXXADYQITGMDNWIKLPGCQYVTST 381
G + + +P NV + + N I+ W+ + + G+ N + C ++
Sbjct: 25 GPSSVPTPTNVTIESYNMNPIVYWEYQIMPQVPVFT-VEVKNYGVKNSEWIDACINISHH 83
Query: 382 ECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQEAQIGPPDVHLEAEDKAII 561
CN S + + +R++A G S + + E F ++ +IGPP + + E+K I+
Sbjct: 84 YCNISD-HVGDPSNSLWVRVKARVGQKESAYAKSEEFAVCRDGKIGPPKLDIRKEEKQIM 142
Query: 562 INLSPP-----GTKNSVMWAMDSSSF--VYSLVIWKNSSSLEERTKT 681
I++ P G + V + +++ + VY++ + N S ++ + T
Sbjct: 143 IDIFHPSVFVNGDEQEVDYDPETTCYIRVYNVYVRMNGSEIQYKILT 189
Score = 37.4 bits (85), Expect = 0.045
Identities = 52/242 (21%), Positives = 100/242 (40%), Gaps = 19/242 (7%)
Frame = +1
Query: 820 LPSPENLEINAENRVYVLKWNYTYENVTFQAQWLHAFLKKIPEDHSDKWKQIPNCENVKT 999
+P+P N+ I + N ++ W Y + Q +K +S+ W I C N+
Sbjct: 29 VPTPTNVTIESYNMNPIVYWEY---QIMPQVPVFTVEVKNYGVKNSE-W--IDACINISH 82
Query: 1000 THCVFPQNV-FTKGIFFIRVQASNGNSTSLWSEEKRFNTEMQTILFPPVINMKPINDASL 1176
+C +V ++RV+A G S +++ + F + PP ++++ + +
Sbjct: 83 HYCNISDHVGDPSNSLWVRVKARVGQKESAYAKSEEFAVCRDGKIGPPKLDIRK-EEKQI 141
Query: 1177 RVGI--------GAPKESEDKSVNQLYPLIYEVIFRENTSDTERDVLEKRTD-------- 1308
+ I G +E + Y +Y V R N S+ + +L ++ D
Sbjct: 142 MIDIFHPSVFVNGDEQEVDYDPETTCYIRVYNVYVRMNGSEIQYKILTQKEDDCDEIQCQ 201
Query: 1309 --FTFSNLKPLTVYCVKARALIENDRWNRSSVFSDTVCEKTKPGSTSQAWLIAGILSAIL 1482
S+L + YCV A ++ W ++ S VC T S+ + L +++A+L
Sbjct: 202 LAIPVSSLN--SQYCVSAEGVLH--VWGVTTEKSKEVC-ITIFNSSIKGSLWIPVVAALL 256
Query: 1483 LF 1488
LF
Sbjct: 257 LF 258
>gi|28416911|ref|NP_775088.1| (NM_173065) interleukin 28 receptor,
alpha isoform 3; class II cytokine receptor CRF2/12;
interferon lambda, receptor 1; interleukin or cytokine
receptor 2; interleukin 28 receptor A [Homo sapiens]
Length = 244
Score = 43.5 bits (101), Expect = 6e-04
Identities = 40/173 (23%), Positives = 63/173 (36%), Gaps = 4/173 (2%)
Frame = +1
Query: 151 GATTLMLVAGAPWVLPAGGADLRSPENVVVSIIDDNFILKWKXXXXXXXXXXXXADYQIT 330
G L L+ AP G L P+NV + + + L W YQ +
Sbjct: 8 GPLLLCLLQAAP-----GRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQSS 62
Query: 331 GMDN-WIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQE 507
W ++ C C+ +K + +Y K K R+R + +S SPW E E E
Sbjct: 63 PTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYLFE 122
Query: 508 AQIGPPDVHLEAEDKAIIINLS---PPGTKNSVMWAMDSSSFVYSLVIWKNSS 657
+ PP + L ++ + N + PP M Y + WK +
Sbjct: 123 VEPAPPVLVLTQTEEILSANATYQLPP--------CMPPLDLKYEVAFWKEGA 167
>gi|28416909|ref|NP_775087.1| (NM_173064) interleukin 28 receptor,
alpha isoform 2; class II cytokine receptor CRF2/12;
interferon lambda, receptor 1; interleukin or cytokine
receptor 2; interleukin 28 receptor A [Homo sapiens]
Length = 491
Score = 43.5 bits (101), Expect = 6e-04
Identities = 40/173 (23%), Positives = 63/173 (36%), Gaps = 4/173 (2%)
Frame = +1
Query: 151 GATTLMLVAGAPWVLPAGGADLRSPENVVVSIIDDNFILKWKXXXXXXXXXXXXADYQIT 330
G L L+ AP G L P+NV + + + L W YQ +
Sbjct: 8 GPLLLCLLQAAP-----GRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQSS 62
Query: 331 GMDN-WIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQE 507
W ++ C C+ +K + +Y K K R+R + +S SPW E E E
Sbjct: 63 PTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYLFE 122
Query: 508 AQIGPPDVHLEAEDKAIIINLS---PPGTKNSVMWAMDSSSFVYSLVIWKNSS 657
+ PP + L ++ + N + PP M Y + WK +
Sbjct: 123 VEPAPPVLVLTQTEEILSANATYQLPP--------CMPPLDLKYEVAFWKEGA 167
Database: RefSeq (Homo Sapiens/Amino Acid)
Posted date: Jul 1, 2003 6:07 AM
Number of letters in database: 10,046,356
Number of sequences in database: 19,244
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50772815
Number of Sequences: 19244
Number of extensions: 1256830
Number of successful extensions: 4239
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1983
Number of HSP's successfully gapped in prelim test: 222
Number of HSP's that attempted gapping in prelim test: 1316
Number of HSP's gapped (non-prelim): 3129
length of query: 827
length of database: 10,046,356
effective HSP length: 49
effective length of query: 778
effective length of database: 9,103,400
effective search space: 7082445200
effective search space used: 7082445200
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search to RefSeq (Mouse) database
Query= 20030531C-003184 (20030531C-003184) 20030531C-003184
(2483 letters)
Database: RefSeq (Mus Musculus/Amino Acid)
15,330 sequences; 7,155,815 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|6754302|ref|NP_034638.1| (NM_010508) interferon (alpha and b... 475 e-134
Alignment gi|6680391|ref|NP_032375.1| (NM_008349) interleukin 10 receptor... 82 1e-15
Alignment gi|6680373|ref|NP_032364.1| (NM_008338) interferon gamma recept... 76 8e-14
Alignment gi|27370160|ref|NP_766374.1| (NM_172786) hypothetical protein E... 69 8e-12
Alignment gi|30142711|ref|NP_839989.1| (NM_178258) interleukin 22 soluble... 46 9e-05
Alignment gi|27807307|ref|NP_777276.1| (NM_174851) interleukin 28 recepto... 40 0.005
Alignment gi|6680389|ref|NP_032374.1| (NM_008348) interleukin 10 receptor... 36 0.070
Alignment gi|31560592|ref|NP_034301.2| (NM_010171) coagulation factor III... 35 0.12
Alignment gi|30142709|ref|NP_839988.1| (NM_178257) interleukin-22 recepto... 35 0.16
Alignment gi|22122549|ref|NP_666171.1| (NM_146059) RIKEN cDNA 2410075B13 ... 33 0.60
>gi|6754302|ref|NP_034638.1| (NM_010508) interferon (alpha and beta)
receptor 1; interferon (alpha and beta) receptor; INF-a
receptor [Mus musculus]
Length = 590
Score = 475 bits (1223), Expect = e-134
Identities = 258/562 (45%), Positives = 355/562 (62%), Gaps = 4/562 (0%)
Frame = +1
Query: 136 MLGFLGATTLMLVAGAPWVLP--AGGADLRSPENVVVSIIDDNFILKWKXXXXXXXXXXX 309
ML +GA L+LVAGAPWVLP AGG +L+ PEN+ V IIDDN+ LKW
Sbjct: 1 MLAVVGAAALVLVAGAPWVLPSAAGGENLKPPENIDVYIIDDNYTLKWSSHGESMGSVTF 60
Query: 310 XADYQITGMDNWIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEP 489
A+Y+ W+K+P CQ+ T+T+C FS + +VY K + R+RAE GNSTS W EV+P
Sbjct: 61 SAEYRTKDEAKWLKVPECQHTTTTKCEFSLLDT-NVYIKTQFRVRAEEGNSTSSWNEVDP 119
Query: 490 FIPFQEAQIGPPDVHLEAEDKAIIINLSPPGTKNSVMWAMDSSSFVYSLVIWKNSSSLEE 669
FIPF A + PP+V LEAEDKAI++++SPPG + MWA++ SF Y++ IW+ SSS ++
Sbjct: 120 FIPFYTAHMSPPEVRLEAEDKAILVHISPPGQDGN-MWALEKPSFSYTIRIWQKSSSDKK 178
Query: 670 RTKTVYARDKIHQLSPETTYCLKVKAGLRSPRKVGVYSPVYCINTTVKHHLPSPENLEIN 849
+ Y +KI +L PETTYCL+VKA S +K YS V CI+TTV + +P P NL+++
Sbjct: 179 TINSTYYVEKIPELLPETTYCLEVKAIHPSLKKHSNYSTVQCISTTVANKMPVPGNLQVD 238
Query: 850 AENRVYVLKWNYTYE-NVTFQAQWLHAFLKKIPEDHSDKWKQIPNCENVKTTHCVFPQNV 1026
A+ + YVLKW+Y +V F+AQWL + K HSDKWK IP C NV+TTHCVF Q+
Sbjct: 239 AQGKSYVLKWDYIASADVLFRAQWLPGYSKSSSGSHSDKWKPIPTCANVQTTHCVFSQDT 298
Query: 1027 FTKGIFFIRVQASNGNSTSLWSEEKRFNTEMQTILFPPVINMKPINDASLRVGIGAPKES 1206
G FF+ VQAS GN TS WSEEK +++ + PPVI + ++D +L V + +
Sbjct: 299 VYTGTFFLHVQASEGNHTSFWSEEKFIDSQKHILPPPPVITVTAMSD-TLLVYVNCQDST 357
Query: 1207 EDKSVNQLYPLIYEVIFRENTSDTERDVLEKRTDFTFSNLKPLTVYCVKARALIENDRWN 1386
D L YE+IF ENTS+T+ + + +FT NL+PLTVYCV+AR L N
Sbjct: 358 CD-------GLNYEIIFWENTSNTKISMEKDGPEFTLKNLQPLTVYCVQARVLF-RALLN 409
Query: 1387 RSSVFSDTVCEKTKPGSTSQAWLIAGILSAILLFPAVFYGVKVVSRCINYVFFPSSKPPS 1566
++S FS+ +CEKT+PGS S W+I G L + V Y ++ V + + +V FP KPP
Sbjct: 410 KTSNFSEKLCEKTRPGSFSTIWIITG-LGVVFFSVMVLYALRSVWKYLCHVCFPPLKPPR 468
Query: 1567 TIDEYFAEQPLKNLLLSTSEEQTEICFIVXXXXXXXXXXXXXXXXXXHSRCSSQTNRDSG 1746
+IDE+F+E P KNL+L T+EE TE CFI+ + SSQT++DSG
Sbjct: 469 SIDEFFSEPPSKNLVLLTAEEHTERCFIIENTDTVAVEVKHAPEEDLR-KYSSQTSQDSG 527
Query: 1747 VYSNEDENS-GSKIGEEILRQA 1809
YSNE+E S G++ G+ +L +A
Sbjct: 528 NYSNEEEESVGTESGQAVLSKA 549
>gi|6680391|ref|NP_032375.1| (NM_008349) interleukin 10 receptor,
beta [Mus musculus]
Length = 349
Score = 81.6 bits (200), Expect = 1e-15
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 5/218 (2%)
Frame = +1
Query: 190 VLPAGGADLRSPENVVVSIIDDNFILKWKXXXXXXXXXXXXADYQI--TGMDNWIKLPGC 363
++PA G + PE V ++ ++ IL+W+ A Y+ + D+ C
Sbjct: 14 LVPALGM-IPPPEKVRMNSVNFKNILQWEVPAFPKTNLTFTAQYESYRSFQDH------C 66
Query: 364 QYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQEAQIGPPDVHLEA 543
+ ST+C+FS + S Y +R+RAE + S W V F P ++ IGPP++ +E+
Sbjct: 67 KRTASTQCDFSHL---SKYGDYTVRVRAELADEHSEWVNVT-FCPVEDTIIGPPEMQIES 122
Query: 544 EDKAIIINLSPPGTKNSV-MWAMDS--SSFVYSLVIWKNSSSLEERTKTVYARDKIHQLS 714
+++ + S P +N W + + S+ Y + WKN ++ + + + Y + + L
Sbjct: 123 LAESLHLRFSAPQIENEPETWTLKNIYDSWAYRVQYWKNGTNEKFQVVSPYDSEVLRNLE 182
Query: 715 PETTYCLKVKAGLRSPRKVGVYSPVYCINTTVKHHLPS 828
P TTYC++V+ L + G +S C T PS
Sbjct: 183 PWTTYCIQVQGFLLDQNRTGEWSEPICERTGNDEITPS 220
Score = 70.1 bits (170), Expect = 4e-12
Identities = 59/236 (25%), Positives = 112/236 (47%), Gaps = 9/236 (3%)
Frame = +1
Query: 820 LPSPENLEINAENRVYVLKWN---YTYENVTFQAQW--LHAFLKKIPEDHSDKWKQIPNC 984
+P PE + +N+ N +L+W + N+TF AQ+ +F +DH C
Sbjct: 21 IPPPEKVRMNSVNFKNILQWEVPAFPKTNLTFTAQYESYRSF-----QDH---------C 66
Query: 985 ENVKTTHCVFPQNVFTKGIFFIRVQASNGNSTSLWSEEKRFNTEMQTILFPPVINMKPIN 1164
+ +T C F ++ G + +RV+A + S W E TI+ PP + ++ +
Sbjct: 67 KRTASTQCDF-SHLSKYGDYTVRVRAELADEHSEWVNVTFCPVE-DTIIGPPEMQIESLA 124
Query: 1165 DASLRVGIGAPK---ESEDKSVNQLYPL-IYEVIFRENTSDTERDVLEKRTDFTFSNLKP 1332
+ SL + AP+ E E ++ +Y Y V + +N ++ + V+ NL+P
Sbjct: 125 E-SLHLRFSAPQIENEPETWTLKNIYDSWAYRVQYWKNGTNEKFQVVSPYDSEVLRNLEP 183
Query: 1333 LTVYCVKARALIENDRWNRSSVFSDTVCEKTKPGSTSQAWLIAGILSAILLFPAVF 1500
T YC++ + + + NR+ +S+ +CE+T + +W++A IL +L +F
Sbjct: 184 WTTYCIQVQGFLLDQ--NRTGEWSEPICERTGNDEITPSWIVAIILIVSVLVVFLF 237
>gi|6680373|ref|NP_032364.1| (NM_008338) interferon gamma receptor 2
[Mus musculus]
Length = 332
Score = 75.9 bits (185), Expect = 8e-14
Identities = 60/228 (26%), Positives = 105/228 (45%), Gaps = 13/228 (5%)
Frame = +1
Query: 163 LMLVAGAPWVLPAGGADLRSPENVVVSIIDDNFILKWKXXXXXXXXXXXXADYQITGMD- 339
L+ GA P + L +P N + + +D IL W+ + + +D
Sbjct: 12 LLCGLGAAASSPDSFSQLAAPLNPRLHLYNDEQILTWEPSPSSNDPRPVVYQVEYSFIDG 71
Query: 340 NWIKL--PGCQYVTSTECNFSS---IKLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQ 504
+W +L P C +T T+C+ + +KL + LR+RA+ GN TS W +EPF ++
Sbjct: 72 SWHRLLEPNCTDITETKCDLTGGGRLKLFPHPFTVFLRVRAKRGNLTSKWVGLEPFQHYE 131
Query: 505 EAQIGPP-DVHLEAEDKAIIINLSPPGTKNSVMWAMDSSSFVYSLVIWKNSSSLEERTKT 681
+GPP ++ + +++I+ SPP ++F Y + W+ S + +E+ +
Sbjct: 132 NVTVGPPKNISVTPGKGSLVIHFSPP------FDVFHGATFQYLVHYWEKSETQQEQVEG 185
Query: 682 VYARDKI--HQLSPETTYCLKVKAGL----RSPRKVGVYSPVYCINTT 807
+ + I L P YCL+ +A L + R G+ S V C TT
Sbjct: 186 PFKSNSIVLGNLKPYRVYCLQTEAQLILKNKKIRPHGLLSNVSCHETT 233
Score = 50.4 bits (119), Expect = 4e-06
Identities = 69/284 (24%), Positives = 122/284 (42%), Gaps = 27/284 (9%)
Frame = +1
Query: 820 LPSPENLEINAENRVYVLKWNYTYEN-----VTFQAQWLHAFLKKIPEDHSDKWKQI--P 978
L +P N ++ N +L W + + V +Q ++ +F+ W ++ P
Sbjct: 29 LAAPLNPRLHLYNDEQILTWEPSPSSNDPRPVVYQVEY--SFI-------DGSWHRLLEP 79
Query: 979 NCENVKTTHC---------VFPQNVFTKGIFFIRVQASNGNSTSLWSEEKRF-NTEMQTI 1128
NC ++ T C +FP + FT F+RV+A GN TS W + F + E T+
Sbjct: 80 NCTDITETKCDLTGGGRLKLFP-HPFT---VFLRVRAKRGNLTSKWVGLEPFQHYENVTV 135
Query: 1129 LFPPVINMKPINDASLRVGIGAPKESEDKSVNQLYPLIYEVIFRENTSDTERDVLE---K 1299
P I++ P SL + P + + Q Y V + E S+T+++ +E K
Sbjct: 136 GPPKNISVTP-GKGSLVIHFSPPFDVFHGATFQ-----YLVHYWEK-SETQQEQVEGPFK 188
Query: 1300 RTDFTFSNLKPLTVYCV--KARALIENDRWNRSSVFSDTVCEKTKPGSTSQAWLI----A 1461
NLKP VYC+ +A+ +++N + + S+ C +T ++++ +
Sbjct: 189 SNSIVLGNLKPYRVYCLQTEAQLILKNKKIRPHGLLSNVSCHETTANASARLQQVILIPL 248
Query: 1462 GILSAIL-LFPAVFYGVKVVSRCINYVFFPSSKPPSTIDEYFAE 1590
GI + +L L A F + Y F P I+EY +
Sbjct: 249 GIFALLLGLTGACFTLFLKYQSRVKYWFQAPPNIPEQIEEYLKD 292
>gi|27370160|ref|NP_766374.1| (NM_172786) hypothetical protein
E230031K19 [Mus musculus]
Length = 546
Score = 69.3 bits (168), Expect = 8e-12
Identities = 52/223 (23%), Positives = 90/223 (40%), Gaps = 7/223 (3%)
Frame = +1
Query: 157 TTLMLVAGAPWVLPAGGADLRSPENVVVSIIDDNFILKWKX-XXXXXXXXXXXADYQITG 333
T L+L+A + +P L P N+ I+ +L W Y I G
Sbjct: 21 TLLLLLAASGRAVPCVFCGLPKPTNITFLSINMKNVLHWNPPESLHGVEVTYTVQYFIYG 80
Query: 334 MDNWIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQEAQ 513
W+ C + T C+ S ++ + +++A S W E E F PF E Q
Sbjct: 81 QKKWLNASKCGSINRTYCDLS-VETSDYEHQFYAKVKAIWEARCSEWAETERFYPFLETQ 139
Query: 514 IGPPDVHLEAEDKAIIINLSPP------GTKNSVMWAMDSSSFVYSLVIWKNSSSLEERT 675
+ PP+V L +K+I I L+ P ++V + Y++ ++ S
Sbjct: 140 VSPPEVALTTGEKSISIALTAPEKWKRNPQDHTVSMQQIYPNLKYNVSVYNTKSRRTWSQ 199
Query: 676 KTVYARDKIHQLSPETTYCLKVKAGLRSPRKVGVYSPVYCINT 804
+ + L P T YC+ V++ + P ++ + S CI+T
Sbjct: 200 CVTNSTLVLSWLEPNTLYCVHVESLVPGPPRLPMPSQKQCIST 242
Score = 54.3 bits (129), Expect = 2e-07
Identities = 61/264 (23%), Positives = 103/264 (38%), Gaps = 13/264 (4%)
Frame = +1
Query: 820 LPSPENLEINAENRVYVLKWNYTYE----NVTFQAQWLHAFLKKIPEDHSDKWKQIPNCE 987
LP P N+ + N VL WN VT+ Q+ KK W C
Sbjct: 40 LPKPTNITFLSINMKNVLHWNPPESLHGVEVTYTVQYFIYGQKK--------WLNASKCG 91
Query: 988 NVKTTHC-VFPQNVFTKGIFFIRVQASNGNSTSLWSEEKRFNTEMQTILFPPVINMKPIN 1164
++ T+C + + + F+ +V+A S W+E +RF ++T + PP + +
Sbjct: 92 SINRTYCDLSVETSDYEHQFYAKVKAIWEARCSEWAETERFYPFLETQVSPPEVAL-TTG 150
Query: 1165 DASLRVGIGAPK------ESEDKSVNQLYP-LIYEVIFRENTSDTERDVLEKRTDFTFSN 1323
+ S+ + + AP+ + S+ Q+YP L Y V S + S
Sbjct: 151 EKSISIALTAPEKWKRNPQDHTVSMQQIYPNLKYNVSVYNTKSRRTWSQCVTNSTLVLSW 210
Query: 1324 LKPLTVYCVKARALIENDRWNRSSVFSDTVCEKTKPGSTSQAWLIAGILSAILLFPAVFY 1503
L+P T+YCV +L+ R + S C T TS AW I + L + +
Sbjct: 211 LEPNTLYCVHVESLVPGP--PRLPMPSQKQCISTLEVQTS-AWKAKVIFWYVFLTSVIVF 267
Query: 1504 GVKVVSRCI-NYVFFPSSKPPSTI 1572
+ + Y+ K P+ +
Sbjct: 268 LFSAIGYLVYRYIHVGKEKHPANL 291
>gi|30142711|ref|NP_839989.1| (NM_178258) interleukin 22 soluble
receptor [Mus musculus]
Length = 230
Score = 45.8 bits (107), Expect = 9e-05
Identities = 46/206 (22%), Positives = 82/206 (39%), Gaps = 24/206 (11%)
Frame = +1
Query: 811 KHHLPSPENLEINAENRVYVLKWNYTYENVTFQAQWLHAFL-----KKIPEDHS------ 957
KH L + +++ + + + T + V FQ++ H L +P ++S
Sbjct: 4 KHCLLGLLIILLSSATEIQPARVSLTPQKVRFQSRNFHNILHWQAGSSLPSNNSIYFVQY 63
Query: 958 -----DKWKQIPNCENVKTTHCVFPQNVFTK-GIFFIRVQASNGNSTSLWSEEKRFNTEM 1119
+W+ +C C +++ RV + S W+ RF
Sbjct: 64 KMYGQSQWEDKVDCWGTTALFCDLTNETLDPYELYYGRVMTACAGRHSAWTRTPRFTPWW 123
Query: 1120 QTILFPPVINMKPINDASLRVGIGAP------KESEDKSVNQLYPLIYEVIFRENTSDTE 1281
+T L PPV+ + +N ASLRV + P + ++ S+ Y L+Y V N+ + E
Sbjct: 124 ETKLDPPVVTITRVN-ASLRVLLRPPDLPNRNQSGKNASMETYYGLVYRVFTINNSLEKE 182
Query: 1282 RDVLE-KRTDFTFSNLKPLTVYCVKA 1356
+ E + L P + YCV A
Sbjct: 183 QKAYEGTQRAVEIEGLIPHSSYCVVA 208
Score = 45.4 bits (106), Expect = 1e-04
Identities = 45/207 (21%), Positives = 85/207 (40%), Gaps = 7/207 (3%)
Frame = +1
Query: 136 MLGFLGATTLMLVAGAPWVLPAGGADLRSPENVVVSIIDDNFILKWKXXXXX-XXXXXXX 312
+LG L ++L++ A + PA + +P+ V + + IL W+
Sbjct: 7 LLGLL----IILLSSATEIQPARVS--LTPQKVRFQSRNFHNILHWQAGSSLPSNNSIYF 60
Query: 313 ADYQITGMDNWIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPF 492
Y++ G W C T+ C+ ++ L YE R+ S W F
Sbjct: 61 VQYKMYGQSQWEDKVDCWGTTALFCDLTNETLDP-YELYYGRVMTACAGRHSAWTRTPRF 119
Query: 493 IPFQEAQIGPPDVHLEAEDKAIIINLSPPGTKNSVMWAMDSSSFVYSLVIWK---NSSSL 663
P+ E ++ PP V + + ++ + L PP N ++S Y ++++ ++SL
Sbjct: 120 TPWWETKLDPPVVTITRVNASLRVLLRPPDLPNRNQSGKNASMETYYGLVYRVFTINNSL 179
Query: 664 EERTKTVYARDK---IHQLSPETTYCL 735
E+ K + I L P ++YC+
Sbjct: 180 EKEQKAYEGTQRAVEIEGLIPHSSYCV 206
>gi|27807307|ref|NP_777276.1| (NM_174851) interleukin 28 receptor
alpha; class II cytokine receptor 12; interferon-lambda
receptor 1 [Mus musculus]
Length = 535
Score = 40.0 bits (92), Expect = 0.005
Identities = 33/152 (21%), Positives = 54/152 (34%), Gaps = 3/152 (1%)
Frame = +1
Query: 202 GGADLRSPENVVVSIIDDNFILKWKXXXXXXXXXXXXADYQITGMDNWIKLPGCQYVTST 381
G L P NV + + L W YQ W + C + +
Sbjct: 20 GRPRLAPPRNVTLFSQNFTVYLTWLPGLGSPPNVTYFVTYQSYIKTGWRPVEHCAGIKAL 79
Query: 382 ECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQEAQIGPPDVHLEAEDKAII 561
C +K ++Y K K R++A + + SP E + ++ PP + L +K +
Sbjct: 80 VCPLMCLKKLNLYSKFKGRVQAASAHGRSPRVESRYLEYLFDVELAPPTLVLTQMEKILR 139
Query: 562 INLS---PPGTKNSVMWAMDSSSFVYSLVIWK 648
+N + PP M S Y + WK
Sbjct: 140 VNATYQLPP--------CMPSLELKYQVEFWK 163
>gi|6680389|ref|NP_032374.1| (NM_008348) interleukin 10 receptor,
alpha [Mus musculus]
Length = 575
Score = 36.2 bits (82), Expect = 0.070
Identities = 49/217 (22%), Positives = 80/217 (36%), Gaps = 10/217 (4%)
Frame = +1
Query: 199 AGGADLRSPENVVVSIIDDNFILKWKXXXXXXXXXXXXADYQITGMDNWIKLPGCQYVTS 378
A G +L SP V IL WK + G W + C+ +
Sbjct: 21 AYGTELPSPSYVWFEARFFQHILHWKPIPNQSESTYYEVALKQYGNSTWNDIHICRKAQA 80
Query: 379 TECNFSSIKLKSVYEKI--KLRIRAETGNSTSPWYEVEPFIPFQEAQIGPPDVHLEAEDK 552
C+ ++ L + + R+RA + S W E E + V L+A D
Sbjct: 81 LSCDLTTFTLDLYHRSYGYRARVRAVDNSQYSNWTTTETRFTVDEVILTVDSVTLKAMDG 140
Query: 553 AIIINLSPPGTKNSVMWAMDSSSFVY-SLVIWKNS----SSLEERTKTVYARDKIHQLSP 717
I + PP + ++ A D V+ L ++K S S L+ TK V + + L+
Sbjct: 141 IIYGTIHPP--RPTITPAGDEYEQVFKDLRVYKISIRKFSELKNATKRV--KQETFTLTV 196
Query: 718 E---TTYCLKVKAGLRSPRKVGVYSPVYCINTTVKHH 819
+C+KV L S +S C+ T + +
Sbjct: 197 PIGVRKFCVKVLPRLESRINKAEWSEEQCLLITTEQY 233
>gi|31560592|ref|NP_034301.2| (NM_010171) coagulation factor III;
tissue factor [Mus musculus]
Length = 294
Score = 35.4 bits (80), Expect = 0.12
Identities = 58/284 (20%), Positives = 107/284 (37%), Gaps = 28/284 (9%)
Frame = +1
Query: 760 PRKVGVYSPVY--CINTTVKHHLPSPE---NLEINAENRVYVLKWNYTYENVTFQAQWLH 924
PR + +P + C+ V PE NL + + +L+W N T+ Q
Sbjct: 7 PRLLAALAPTFLGCLLLQVTAGAGIPEKAFNLTWISTDFKTILEWQPKPTNYTYTVQI-- 64
Query: 925 AFLKKIPEDHSDKWKQIPNCENVKTTHCVFPQNVF--------TKGIFFIRVQASNGNST 1080
D S WK C + T C + K + R + +G+
Sbjct: 65 -------SDRSRNWKN--KCFSTTDTECDLTDEIVKDVTWAYEAKVLSVPRRNSVHGDGD 115
Query: 1081 SL--------WSEEKRFNTEMQTILFPPVINMKPINDASLRVGIG-----APKESEDKSV 1221
L ++ +F T L PVI N L V + K ++
Sbjct: 116 QLVIHGEEPPFTNAPKFLPYRDTNLGQPVIQQFEQNGRKLNVVVKDSLTLVRKNGTFLTL 175
Query: 1222 NQLY--PLIYEVIFRENTSDTERDVLEKRTDFTFSNLKPLTVYCVKARALIENDRWNRSS 1395
Q++ L Y + +R+ +S ++ + +F+ +++ YC +A+I + + N++S
Sbjct: 176 RQVFGKDLGYIITYRKGSSTGKKTNITNTNEFSI-DVEEGVSYCFFVQAMIFSRKTNQNS 234
Query: 1396 VFSDTVCEKTKPGSTSQAWLIAGILSAILLFPAVFYGVKVVSRC 1527
S TVC + + +I G A++L +F + +S C
Sbjct: 235 PGSSTVCTEQWKSFLGETLIIVG---AVVLLATIFIILLSISLC 275
>gi|30142709|ref|NP_839988.1| (NM_178257) interleukin-22 receptor
alpha chain [Mus musculus]
Length = 581
Score = 35.0 bits (79), Expect = 0.16
Identities = 21/90 (23%), Positives = 34/90 (37%)
Frame = +1
Query: 262 ILKWKXXXXXXXXXXXXADYQITGMDNWIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRI 441
IL W +Y+ G W+ GCQ +T CN +++ ++ E ++
Sbjct: 38 ILTWDGGPASTSDTVYSVEYKKYGERKWLAKAGCQRITQKFCNL-TMETRNHTEFYYAKV 96
Query: 442 RAETGNSTSPWYEVEPFIPFQEAQIGPPDV 531
A + + F Q I PPDV
Sbjct: 97 TAVSAGGPPVTKMTDRFSSLQHTTIKPPDV 126
>gi|22122549|ref|NP_666171.1| (NM_146059) RIKEN cDNA 2410075B13 [Mus
musculus]
Length = 287
Score = 33.1 bits (74), Expect = 0.60
Identities = 16/35 (45%), Positives = 24/35 (67%)
Frame = -1
Query: 2156 RLTQAQPSARGARVPAVTSGRWRASSGFNASHPRP 2052
R++ A PS +G+RVP++TSG R+ G S P+P
Sbjct: 203 RVSSATPSRKGSRVPSMTSGTLRSREGSRIS-PQP 236
Database: RefSeq (Mus Musculus/Amino Acid)
Posted date: Jul 1, 2003 6:07 AM
Number of letters in database: 7,155,815
Number of sequences in database: 15,330
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36217274
Number of Sequences: 15330
Number of extensions: 891524
Number of successful extensions: 2859
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1798
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 546
Number of HSP's gapped (non-prelim): 2379
length of query: 827
length of database: 7,155,815
effective HSP length: 49
effective length of query: 778
effective length of database: 6,404,645
effective search space: 4982813810
effective search space used: 4982813810
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)