Animal-Genome cDNA Clone 20030531/20030531C-0/20030531C-003184


Query

>20030531C-003184 (20030531C-003184) 20030531C-003184
CGCGAGCGGC GCGAGGGGAC AGGGCCGCAC GGGTCCCAGG TCCCGGGGTG
GCCTGTGCAC CCAAGTTTCC CTTGCGCCGC GCTTCCTGAT GTGGCCGAAG
ACGTGATTGG AAGCGCCGGC GGCCGCCCGC GGACGATGCT CGGGTTTCTG
GGTGCGACGA CCCTGATGCT GGTCGCTGGG GCTCCGTGGG TGTTGCCCGC
AGGGGGTGCA GATCTCAGAT CTCCTGAAAA TGTCGTGGTC TCTATCATTG
ATGACAACTT CATCCTGAAA TGGAAGAGCA GCAGTGAATC CGTCAGCAAT
GTGACTTTTT CAGCAGATTA TCAAATAACA GGGATGGATA ATTGGATAAA
GTTGCCTGGA TGTCAATATG TTACTAGCAC TGAATGCAAC TTTTCTTCCA
TCAAGCTTAA AAGCGTGTAT GAAAAAATTA AATTGCGTAT AAGAGCAGAA
ACAGGAAACA GCACTTCTCC GTGGTATGAG GTTGAGCCGT TTATACCATT
TCAAGAAGCA CAAATTGGCC CTCCAGATGT ACATTTAGAA GCCGAAGATA
AAGCAATAAT AATAAACCTC TCTCCTCCTG GCACAAAAAA CAGTGTCATG
TGGGCTATGG ATAGTTCAAG TTTCGTGTAT AGCTTAGTAA TCTGGAAAAA
CTCTTCAAGT CTAGAAGAAA GGACTAAAAC TGTTTATGCC AGAGATAAAA
TTCACCAACT CTCACCAGAG ACAACTTACT GTTTAAAAGT TAAAGCCGGA
CTCCGTTCGC CAAGAAAAGT CGGTGTCTAC AGTCCAGTGT ATTGTATAAA
TACCACAGTG AAACATCACC TGCCTTCACC AGAAAATCTA GAAATTAATG
CTGAAAACCG GGTCTATGTT CTTAAATGGA ATTACACCTA TGAAAATGTG
ACTTTTCAAG CTCAGTGGCT CCATGCCTTT TTAAAAAAGA TTCCTGAGGA
CCATTCAGAC AAGTGGAAAC AAATACCAAA CTGTGAAAAT GTCAAAACGA
CCCATTGTGT CTTTCCTCAA AATGTTTTCA CGAAAGGAAT TTTCTTCATC
CGTGTCCAAG CATCTAATGG AAATAGCACA TCTCTTTGGT CCGAAGAGAA
GAGATTTAAT ACTGAAATGC AAACTATCCT GTTTCCTCCC GTCATCAACA
TGAAACCCAT AAATGATGCT TCACTGCGTG TCGGTATCGG TGCTCCGAAA
GAATCTGAGG ACAAGTCTGT GAACCAGCTT TACCCACTAA TTTATGAAGT
TATTTTTAGA GAAAACACTT CAGATACTGA GAGAGACGTT CTAGAGAAGA
GAACGGATTT TACTTTCTCT AACTTGAAAC CACTGACTGT GTATTGTGTC
AAAGCCAGAG CACTCATCGA GAATGACAGG TGGAATAGAA GCAGTGTTTT
TAGTGACACT GTGTGCGAGA AAACCAAACC AGGAAGCACT TCCCAAGCCT
GGCTTATAGC TGGAATTCTC TCGGCGATAC TTTTGTTCCC TGCTGTTTTT
TATGGTGTGA AAGTCGTCTC GCGATGTATC AATTATGTGT TCTTCCCATC
AAGTAAACCT CCTTCCACTA TAGATGAGTA TTTCGCTGAA CAGCCACTCA
AGAATCTGCT TCTCTCCACC TCTGAAGAAC AAACCGAAAT ATGTTTCATC
GTTGAAAATA CAAACACTAT TACTACAATA GAAGAGACTG ATCAAATTGA
TGACAATCAC AGCAGATGCA GTTCTCAAAC GAATCGGGAT TCAGGAGTCT
ATTCGAATGA AGATGAAAAC AGTGGAAGCA AAATAGGAGA AGAAATTCTG
CGACAGGCAG CCGTGTGACC AGAACGCTTT AAAATCTTGG GAAGTCTATG
GAACTTAACA GCAGGAGCCT GAGCTCCTTG CTTCTCTCAG TAACTCTTAA
GAACGTATTT GCTTGTGGCG GAACAAAAAA GCACCTTCAG ATCATCGGTC
CTCAAAATAC AGGCAAGCAC TTAACTCTTT AAAAGGAATC TGGAAAAGAG
TTTGCTGTAT TCTTTTCTGT ATGGAAAGTC TTGGCCAACC TGTCATTGGA
CCGGCCTTGG ATGAGAGGCA TTAAATCCCG AAGATGCCCT CCATCTTCCT
GATGTCACCG CGGGTACCCT GGCACCTCTG GCTGAAGGCT GTGCTTGTGT
CAGCCGGCCG ATAGCCTTGC GGTGCTGCTG CTGATGCCAC GTGTGTCATT
GGTCCCTTCT CCGTCCCAGC GTCACAGTGC ATTATTCCTC CAGAGACACC
CAGAACACTC AGTCTTTTTC TTGAACACTG AAGTGAGCCC TTTGGAAATG
TCTTTAGAAA GGTCTGAATC CCAGCATCAC ATGGTTTTCT GAAAAGTAGC
TCACTCTGGA AAACAGCCGC AGGTGCCAGA AACATGGTCC TTAACGATTT
CAGGGAAATT CTATCCATTT ATCCCAGAAA CATGGTCCTT AACGATTTCA
GGGAAATTCT ATCCATTTAT CCCAATTACA TCA

Search to RefSeq (Human) database

Query= 20030531C-003184 (20030531C-003184) 20030531C-003184
         (2483 letters)

Database: RefSeq (Homo Sapiens/Amino Acid)
           19,244 sequences; 10,046,356 total letters

Searching..................................................done

                                                                               Score     E
            Sequences producing significant alignments:                        (bits)  Value

Alignment   gi|10835183|ref|NP_000620.1| (NM_000629) interferon (alpha, bet...   701  0.0
Alignment   gi|24430215|ref|NP_000619.3| (NM_000628) interleukin 10 recepto...    87  6e-17
Alignment   gi|31083156|ref|NP_055247.2| (NM_014432) interleukin 20 recepto...    72  2e-12
Alignment   gi|5031783|ref|NP_005525.1| (NM_005534) interferon gamma recept...    52  2e-06
Alignment   gi|16418459|ref|NP_443194.1| (NM_052962) interleukin 22-binding...    52  2e-06
Alignment   gi|31317241|ref|NP_851826.1| (NM_181309) interleukin 22-binding...    52  2e-06
Alignment   gi|4503641|ref|NP_001984.1| (NM_001993) coagulation factor III ...    51  4e-06
Alignment   gi|4557880|ref|NP_000407.1| (NM_000416) interferon gamma recept...    45  2e-04
Alignment   gi|28416911|ref|NP_775088.1| (NM_173065) interleukin 28 recepto...    44  6e-04
Alignment   gi|28416909|ref|NP_775087.1| (NM_173064) interleukin 28 recepto...    44  6e-04


>gi|10835183|ref|NP_000620.1| (NM_000629) interferon (alpha, beta and
            omega) receptor 1; human interferon-alpha receptor
            (HuIFN-alpha-Rec) [Homo sapiens]
          Length = 557

 Score =  701 bits (1810), Expect = 0.0
 Identities = 351/556 (63%), Positives = 426/556 (76%), Gaps = 2/556 (0%)
 Frame = +1

Query: 136  MLGFLGATTLMLVAGAPWVLPA--GGADLRSPENVVVSIIDDNFILKWKXXXXXXXXXXX 309
            M+  LGATTL+LVA  PWVL A  GG +L+SP+ V V IIDDNFIL+W
Sbjct: 2    MVVLLGATTLVLVAVGPWVLSAAAGGKNLKSPQKVEVDIIDDNFILRWNRSDESVGNVTF 61

Query: 310  XADYQITGMDNWIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEP 489
              DYQ TGMDNWIKL GCQ +TST+CNFSS+KL +VYE+IKLRIRAE  N TS WYEV+
Sbjct: 62   SFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKL-NVYEEIKLRIRAEKEN-TSSWYEVDS 119

Query: 490  FIPFQEAQIGPPDVHLEAEDKAIIINLSPPGTKNSVMWAMDSSSFVYSLVIWKNSSSLEE 669
            F PF++AQIGPP+VHLEAEDKAI+I++SP GTK+SVMWA+D  SF YSL+IWKNSS +EE
Sbjct: 120  FTPFRKAQIGPPEVHLEAEDKAIVIHISP-GTKDSVMWALDGLSFTYSLLIWKNSSGVEE 178

Query: 670  RTKTVYARDKIHQLSPETTYCLKVKAGLRSPRKVGVYSPVYCINTTVKHHLPSPENLEIN 849
            R + +Y+R KI++LSPETTYCLKVKA L +  K+GVYSPV+CI TTV++ LP PEN+E++
Sbjct: 179  RIENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVS 238

Query: 850  AENRVYVLKWNYTYENVTFQAQWLHAFLKKIPEDHSDKWKQIPNCENVKTTHCVFPQNVF 1029
             +N+ YVLKW+YTY N+TFQ QWLHAFLK+ P +H  KWKQIP+CENVKTT CVFPQNVF
Sbjct: 239  VQNQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVF 298

Query: 1030 TKGIFFIRVQASNGNSTSLWSEEKRFNTEMQTILFPPVINMKPINDASLRVGIGAPKESE 1209
             KGI+ +RVQAS+GN+TS WSEE +F+TE+Q  L PPV N++ ++D S  + IGAPK+S
Sbjct: 299  QKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPVFNIRSLSD-SFHIYIGAPKQSG 357

Query: 1210 DKSVNQLYPLIYEVIFRENTSDTERDVLEKRTDFTFSNLKPLTVYCVKARALIENDRWNR 1389
            +  V Q YPLIYE+IF ENTS+ ER ++EK+TD T  NLKPLTVYCVKARA   +++ N+
Sbjct: 358  NTPVIQDYPLIYEIIFWENTSNAERKIIEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNK 417

Query: 1390 SSVFSDTVCEKTKPGSTSQAWLIAGILSAILLFPAVFYGVKVVSRCINYVFFPSSKPPST 1569
            SSVFSD VCEKTKPG+TS+ WLI GI  A+   P V Y  KV  RCINYVFFPS KP S+
Sbjct: 418  SSVFSDAVCEKTKPGNTSKIWLIVGICIALFALPFVIYAAKVFLRCINYVFFPSLKPSSS 477

Query: 1570 IDEYFAEQPLKNLLLSTSEEQTEICFIVXXXXXXXXXXXXXXXXXXHSRCSSQTNRDSGV 1749
            IDEYF+EQPLKNLLLSTSEEQ E CFI+                  H + SSQT++DSG
Sbjct: 478  IDEYFSEQPLKNLLLSTSEEQIEKCFIIENISTIATVEETNQTDEDHKKYSSQTSQDSGN 537

Query: 1750 YSNEDENSGSKIGEEI 1797
            YSNEDE S SK  EE+
Sbjct: 538  YSNEDE-SESKTSEEL 552



>gi|24430215|ref|NP_000619.3| (NM_000628) interleukin 10 receptor,
           beta precursor; cytokine receptor family II, member 4;
           cytokine receptor class-II CRF2-4 [Homo sapiens]
          Length = 325

 Score = 86.7 bits (213), Expect = 6e-17
 Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 3/205 (1%)
 Frame = +1

Query: 223 PENVVVSIIDDNFILKWKXXXXXXXXXXXXADYQITGMDNWIKLPGCQYVTSTECNFSSI 402
           PENV ++ ++   IL+W+            A Y    +   I    C   T TEC+FSS+
Sbjct: 24  PENVRMNSVNFKNILQWESPAFAKGNLTFTAQY----LSYRIFQDKCMNTTLTECDFSSL 79

Query: 403 KLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQEAQIGPPDVHLEAEDKAIIINLSPPG 582
              S Y    LR+RAE  +  S W  +  F P  +  IGPP + +E    ++ +    P
Sbjct: 80  ---SKYGDHTLRVRAEFADEHSDWVNIT-FCPVDDTIIGPPGMQVEVLADSLHMRFLAPK 135

Query: 583 TKNSV-MWAMDS--SSFVYSLVIWKNSSSLEERTKTVYARDKIHQLSPETTYCLKVKAGL 753
            +N    W M +  +S+ Y++  WKN +  + +    Y  + +  L P TTYC++V+  L
Sbjct: 136 IENEYETWTMKNVYNSWTYNVQYWKNGTDEKFQITPQYDFEVLRNLEPWTTYCVQVRGFL 195

Query: 754 RSPRKVGVYSPVYCINTTVKHHLPS 828
               K G +S   C  TT    +PS
Sbjct: 196 PDRNKAGEWSEPVCEQTTHDETVPS 220


 Score = 80.9 bits (198), Expect = 4e-15
 Identities = 80/286 (27%), Positives = 130/286 (44%), Gaps = 12/286 (4%)
 Frame = +1

Query: 793  CINTTVKHHLPSPENLEINAENRVYVLKWN---YTYENVTFQAQWLHAFLKKIPEDHSDK 963
            C+  +    +P PEN+ +N+ N   +L+W    +   N+TF AQ+L     +I +D
Sbjct: 12   CLLVSALGMVPPPENVRMNSVNFKNILQWESPAFAKGNLTFTAQYLSY---RIFQD---- 64

Query: 964  WKQIPNCENVKTTHCVFPQNVFTKGIFFIRVQASNGNSTSLWSEEKRFNTEMQTILFPPV 1143
                  C N   T C F  ++   G   +RV+A   +  S W     F     TI+ PP
Sbjct: 65   -----KCMNTTLTECDF-SSLSKYGDHTLRVRAEFADEHSDWVNIT-FCPVDDTIIGPPG 117

Query: 1144 INMKPINDASLRVGIGAPK---ESEDKSVNQLY-PLIYEVIFRENTSDTERDVLEKRTDF 1311
            + ++ + D SL +   APK   E E  ++  +Y    Y V + +N +D +  +  +
Sbjct: 118  MQVEVLAD-SLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKNGTDEKFQITPQYDFE 176

Query: 1312 TFSNLKPLTVYCVKARALIENDRWNRSSVFSDTVCEKTKPGSTSQAWLIAGILSA-ILLF 1488
               NL+P T YCV+ R  +  DR N++  +S+ VCE+T    T  +W++A IL A + +
Sbjct: 177  VLRNLEPWTTYCVQVRGFLP-DR-NKAGEWSEPVCEQTTHDETVPSWMVAVILMASVFMV 234

Query: 1489 PAVFYGVKVVSRCI----NYVFFPSSKPPSTIDEYFAEQPLKNLLL 1614
                 G   +  C+     Y F P +  P  + E F   P  N LL
Sbjct: 235  CLALLGCFALLWCVYKKTKYAFSPRNSLPQHLKE-FLGHPHHNTLL 279



>gi|31083156|ref|NP_055247.2| (NM_014432) interleukin 20 receptor,
           alpha; class II cytokine receptor ZCYTOR7 [Homo sapiens]
          Length = 553

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 57/224 (25%), Positives = 95/224 (41%), Gaps = 10/224 (4%)
 Frame = +1

Query: 163 LMLVAGAPW--VLPAGGADLRSPENVVVSIIDDNFILKWKX-XXXXXXXXXXXADYQITG 333
           L+L+  APW   +P     L  P N+    I+   +L+W                Y I G
Sbjct: 18  LLLLLAAPWGRAVPCVSGGLPKPANITFLSINMKNVLQWTPPEGLQGVKVTYTVQYFIYG 77

Query: 334 MDNWIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQEAQ 513
              W+    C+ +  T C+ S+ +      +   +++A  G   S W E   F PF E Q
Sbjct: 78  QKKWLNKSECRNINRTYCDLSA-ETSDYEHQYYAKVKAIWGTKCSKWAESGRFYPFLETQ 136

Query: 514 IGPPDVHLEAEDKAIIINLSPPGT-KNSVMWAMDSSSFVYSLVIWKNSSSLEERTKTVYA 690
           IGPP+V L  ++K+I + L+ P   K +      S   +YS + + N S L  ++   ++
Sbjct: 137 IGPPEVALTTDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKY-NVSVLNTKSNRTWS 195

Query: 691 RDKIHQ------LSPETTYCLKVKAGLRSPRKVGVYSPVYCINT 804
           +   +       L P T YC+ V++ +  P +    S   C  T
Sbjct: 196 QCVTNHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCART 239


 Score = 54.3 bits (129), Expect = 4e-07
 Identities = 59/269 (21%), Positives = 105/269 (38%), Gaps = 18/269 (6%)
 Frame = +1

Query: 820  LPSPENLEINAENRVYVLKWN----YTYENVTFQAQWLHAFLKKIPEDHSDKWKQIPNCE 987
            LP P N+   + N   VL+W          VT+  Q+     KK        W     C
Sbjct: 37   LPKPANITFLSINMKNVLQWTPPEGLQGVKVTYTVQYFIYGQKK--------WLNKSECR 88

Query: 988  NVKTTHC-VFPQNVFTKGIFFIRVQASNGNSTSLWSEEKRFNTEMQTILFPPVINMKPIN 1164
            N+  T+C +  +    +  ++ +V+A  G   S W+E  RF   ++T + PP + +   +
Sbjct: 89   NINRTYCDLSAETSDYEHQYYAKVKAIWGTKCSKWAESGRFYPFLETQIGPPEVAL-TTD 147

Query: 1165 DASLRVGIGAPK------ESEDKSVNQLYP-LIYEVIFRENTSDTERDVLEKRTDFTFSN 1323
            + S+ V + AP+      E    S+ Q+Y  L Y V      S+              +
Sbjct: 148  EKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRTWSQCVTNHTLVLTW 207

Query: 1324 LKPLTVYCVKARALIENDRWNRSSVFSDTVCEKTKPGSTSQ------AWLIAGILSAILL 1485
            L+P T+YCV   + +      R +  S+  C +T    +S+       W +  +   + L
Sbjct: 208  LEPNTLYCVHVESFVPGP--PRRAQPSEKQCARTLKDQSSEFKAKIIFWYVLPVSITVFL 265

Query: 1486 FPAVFYGVKVVSRCINYVFFPSSKPPSTI 1572
            F  + Y +        Y+     K P+ +
Sbjct: 266  FSVMGYSI------YRYIHVGKEKHPANL 288



>gi|5031783|ref|NP_005525.1| (NM_005534) interferon gamma receptor 2
           (interferon gamma transducer 1); interferon gamma
           receptor accessory factor-1; interferon-gamma receptor
           beta chain precursor [Homo sapiens]
          Length = 337

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 8/156 (5%)
 Frame = +1

Query: 361 CQYVTSTECNFSSIKLKSVYE---KIKLRIRAETGNSTSPWYEVEPFIPFQEAQIGPPD- 528
           C  +T+TEC+F++    + +     + LR+RAE G   S W  +  F  ++   +GPP+
Sbjct: 86  CTQITATECDFTAASPSAGFPMDFNVTLRLRAELGALHSAWVTMPWFQHYRNVTVGPPEN 145

Query: 529 VHLEAEDKAIIINLSPPGTKNSVMWAMDSSSFVYSLVIWKNSSSLEERTKTVYARDKIHQ 708
           + +   + ++II  S P        A     F Y +  W+     + +         +
Sbjct: 146 IEVTPGEGSLIIRFSSPFDIADTSTAF----FCYYVHYWEKGGIQQVKGPFRSNSISLDN 201

Query: 709 LSPETTYCLKVKAGLRSPR----KVGVYSPVYCINT 804
           L P   YCL+V+A L   +    +VG  S + C  T
Sbjct: 202 LKPSRVYCLQVQAQLLWNKSNIFRVGHLSNISCYET 237


 Score = 49.7 bits (117), Expect = 9e-06
 Identities = 70/314 (22%), Positives = 121/314 (38%), Gaps = 23/314 (7%)
 Frame = +1

Query: 769  VGVYSPVYCINTTVKHHLPSPENLEINAENRVYVLKW-----NYTYENVTFQAQWLHAFL 933
            +GV++            LP+P++ +I   N   VL W     + +   V ++ Q+ +
Sbjct: 13   LGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNSTRPVVYRVQFKYTDS 72

Query: 934  KKIPEDHSDKWKQIPNCENVKTTHCVFPQNVFTKGI-----FFIRVQASNGNSTSLWSEE 1098
            K    D         NC  +  T C F     + G        +R++A  G   S W
Sbjct: 73   KWFTADIMSIGV---NCTQITATECDFTAASPSAGFPMDFNVTLRLRAELGALHSAWVTM 129

Query: 1099 KRFNTEMQTILFPPV-INMKPINDASLRVGIGAPKESEDKSVNQLYPLIYEVIFRENTSD 1275
              F       + PP  I + P  + SL +   +P +  D S        Y V + E
Sbjct: 130  PWFQHYRNVTVGPPENIEVTP-GEGSLIIRFSSPFDIADTSTAFF---CYYVHYWEKGGI 185

Query: 1276 TERDVLEKRTDFTFSNLKPLTVYCVKARALIENDRWNRSSVF-----SDTVCEKTKPGST 1440
             +     +    +  NLKP  VYC++ +A +    WN+S++F     S+  C +T   ++
Sbjct: 186  QQVKGPFRSNSISLDNLKPSRVYCLQVQAQL---LWNKSNIFRVGHLSNISCYETMADAS 242

Query: 1441 SQAWLI----AGILSAI-LLFPAVFYGVKVVSRCINYVFFPSSKPPSTIDEYFAE--QPL 1599
            ++   +     G  S + +L  A F+ V      I Y F      P  I+EY  +  QP+
Sbjct: 243  TELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQIEEYLKDPTQPI 302

Query: 1600 KNLLLSTSEEQTEI 1641
               L   S  + ++
Sbjct: 303  LEALDKDSSPKDDV 316



>gi|16418459|ref|NP_443194.1| (NM_052962) interleukin 22-binding
            protein isoform 1; class II cytokine receptor;
            interleukin 22-binding protein [Homo sapiens]
          Length = 263

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 39/140 (27%), Positives = 66/140 (46%), Gaps = 8/140 (5%)
 Frame = +1

Query: 961  KWKQIPNCENVKTTHC-VFPQNVFTKGIFFIRVQASNGNSTSLWSEEKRFNTEMQTILFP 1137
            +WK   +C   +   C +  +    +  ++ RV+A++  S S WS   RF    +T + P
Sbjct: 103  QWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWETKIDP 162

Query: 1138 PVINMKPINDASLRVGIGAP------KESEDKSVNQLYPLIYEVIFRENTSDTERDVLE- 1296
            PV+N+  +N  SL V + AP      ++ ++ S+   Y L+Y V    N+ + E+ V E
Sbjct: 163  PVMNITQVN-GSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKEQKVYEG 221

Query: 1297 KRTDFTFSNLKPLTVYCVKA 1356
                     L P + YCV A
Sbjct: 222  AHRAVEIEALTPHSSYCVVA 241


 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 32/141 (22%), Positives = 60/141 (41%), Gaps = 6/141 (4%)
 Frame = +1

Query: 331 GMDNWIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQEA 510
           G   W     C       C+ +S +   + E    R+RA +  S S W     F P+ E
Sbjct: 100 GQRQWKNKEDCWGTQELSCDLTS-ETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWET 158

Query: 511 QIGPPDVHLEAEDKAIIINLSPPG-----TKNSVMWAMDSSSFVYSLVIWKNSSSLEERT 675
           +I PP +++   + ++++ L  P       K   +   D    +Y + I  NS   E++
Sbjct: 159 KIDPPVMNITQVNGSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKEQKV 218

Query: 676 -KTVYARDKIHQLSPETTYCL 735
            +  +   +I  L+P ++YC+
Sbjct: 219 YEGAHRAVEIEALTPHSSYCV 239



>gi|31317241|ref|NP_851826.1| (NM_181309) interleukin 22-binding
            protein isoform 2; class II cytokine receptor;
            interleukin 22-binding protein [Homo sapiens]
          Length = 231

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 39/140 (27%), Positives = 66/140 (46%), Gaps = 8/140 (5%)
 Frame = +1

Query: 961  KWKQIPNCENVKTTHC-VFPQNVFTKGIFFIRVQASNGNSTSLWSEEKRFNTEMQTILFP 1137
            +WK   +C   +   C +  +    +  ++ RV+A++  S S WS   RF    +T + P
Sbjct: 71   QWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAASAGSYSEWSMTPRFTPWWETKIDP 130

Query: 1138 PVINMKPINDASLRVGIGAP------KESEDKSVNQLYPLIYEVIFRENTSDTERDVLE- 1296
            PV+N+  +N  SL V + AP      ++ ++ S+   Y L+Y V    N+ + E+ V E
Sbjct: 131  PVMNITQVN-GSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKEQKVYEG 189

Query: 1297 KRTDFTFSNLKPLTVYCVKA 1356
                     L P + YCV A
Sbjct: 190  AHRAVEIEALTPHSSYCVVA 209


 Score = 51.2 bits (121), Expect = 3e-06
 Identities = 47/206 (22%), Positives = 83/206 (39%), Gaps = 7/206 (3%)
 Frame = +1

Query: 139 LGFLGATTLMLVAGAPWVLPAGGADLRSPENVVVSIIDDNFILKWK-XXXXXXXXXXXXA 315
           LGFL +  L  VAG          +   P+ V     + + IL+W+
Sbjct: 8   LGFLISFFLTGVAGTQ-----STHESLKPQRVQFQSRNFHNILQWQPGRALTGNSSVYFV 62

Query: 316 DYQITGMDNWIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPFI 495
            Y+I G   W     C       C+ +S +   + E    R+RA +  S S W     F
Sbjct: 63  QYKIYGQRQWKNKEDCWGTQELSCDLTS-ETSDIQEPYYGRVRAASAGSYSEWSMTPRFT 121

Query: 496 PFQEAQIGPPDVHLEAEDKAIIINLSPPG-----TKNSVMWAMDSSSFVYSLVIWKNSSS 660
           P+ E +I PP +++   + ++++ L  P       K   +   D    +Y + I  NS
Sbjct: 122 PWWETKIDPPVMNITQVNGSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLE 181

Query: 661 LEERT-KTVYARDKIHQLSPETTYCL 735
            E++  +  +   +I  L+P ++YC+
Sbjct: 182 KEQKVYEGAHRAVEIEALTPHSSYCV 207



>gi|4503641|ref|NP_001984.1| (NM_001993) coagulation factor III
           precursor; Coagulation factor III; CD142 [Homo sapiens]
          Length = 295

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 43/168 (25%), Positives = 74/168 (43%), Gaps = 22/168 (13%)
 Frame = +1

Query: 361 CQYVTSTECNFSSIKLKSVYEKIKLRIRA-------ETGNSTSPWYEVEP-FIPFQEAQI 516
           C Y T TEC+ +   +K V +    R+ +        TG++  P YE  P F P+ E  +
Sbjct: 81  CFYTTDTECDLTDEIVKDVKQTYLARVFSYPAGNVESTGSAGEPLYENSPEFTPYLETNL 140

Query: 517 GPPD----------VHLEAEDKAIIINLSPPGTKNSVMWAMD--SSSFVYSLVIWKNSSS 660
           G P           V++  ED+  ++  +     N+ +   D      +Y+L  WK+SSS
Sbjct: 141 GQPTIQSFEQVGTKVNVTVEDERTLVRRN-----NTFLSLRDVFGKDLIYTLYYWKSSSS 195

Query: 661 LEERTKTVYARDKIHQLSPETTYCLKVKAGL--RSPRKVGVYSPVYCI 798
            ++  KT    + +  +     YC  V+A +  R+  +    SPV C+
Sbjct: 196 GKKTAKT-NTNEFLIDVDKGENYCFSVQAVIPSRTVNRKSTDSPVECM 242



>gi|4557880|ref|NP_000407.1| (NM_000416) interferon gamma receptor
           1; Immune interferon, receptor for [Homo sapiens]
          Length = 489

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 35/167 (20%), Positives = 76/167 (44%), Gaps = 7/167 (4%)
 Frame = +1

Query: 202 GGADLRSPENVVVSIIDDNFILKWKXXXXXXXXXXXXADYQITGMDNWIKLPGCQYVTST 381
           G + + +P NV +   + N I+ W+             + +  G+ N   +  C  ++
Sbjct: 25  GPSSVPTPTNVTIESYNMNPIVYWEYQIMPQVPVFT-VEVKNYGVKNSEWIDACINISHH 83

Query: 382 ECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQEAQIGPPDVHLEAEDKAII 561
            CN S   +      + +R++A  G   S + + E F   ++ +IGPP + +  E+K I+
Sbjct: 84  YCNISD-HVGDPSNSLWVRVKARVGQKESAYAKSEEFAVCRDGKIGPPKLDIRKEEKQIM 142

Query: 562 INLSPP-----GTKNSVMWAMDSSSF--VYSLVIWKNSSSLEERTKT 681
           I++  P     G +  V +  +++ +  VY++ +  N S ++ +  T
Sbjct: 143 IDIFHPSVFVNGDEQEVDYDPETTCYIRVYNVYVRMNGSEIQYKILT 189


 Score = 37.4 bits (85), Expect = 0.045
 Identities = 52/242 (21%), Positives = 100/242 (40%), Gaps = 19/242 (7%)
 Frame = +1

Query: 820  LPSPENLEINAENRVYVLKWNYTYENVTFQAQWLHAFLKKIPEDHSDKWKQIPNCENVKT 999
            +P+P N+ I + N   ++ W Y    +  Q       +K     +S+ W  I  C N+
Sbjct: 29   VPTPTNVTIESYNMNPIVYWEY---QIMPQVPVFTVEVKNYGVKNSE-W--IDACINISH 82

Query: 1000 THCVFPQNV-FTKGIFFIRVQASNGNSTSLWSEEKRFNTEMQTILFPPVINMKPINDASL 1176
             +C    +V       ++RV+A  G   S +++ + F       + PP ++++   +  +
Sbjct: 83   HYCNISDHVGDPSNSLWVRVKARVGQKESAYAKSEEFAVCRDGKIGPPKLDIRK-EEKQI 141

Query: 1177 RVGI--------GAPKESEDKSVNQLYPLIYEVIFRENTSDTERDVLEKRTD-------- 1308
             + I        G  +E +       Y  +Y V  R N S+ +  +L ++ D
Sbjct: 142  MIDIFHPSVFVNGDEQEVDYDPETTCYIRVYNVYVRMNGSEIQYKILTQKEDDCDEIQCQ 201

Query: 1309 --FTFSNLKPLTVYCVKARALIENDRWNRSSVFSDTVCEKTKPGSTSQAWLIAGILSAIL 1482
                 S+L   + YCV A  ++    W  ++  S  VC  T   S+ +  L   +++A+L
Sbjct: 202  LAIPVSSLN--SQYCVSAEGVLH--VWGVTTEKSKEVC-ITIFNSSIKGSLWIPVVAALL 256

Query: 1483 LF 1488
            LF
Sbjct: 257  LF 258



>gi|28416911|ref|NP_775088.1| (NM_173065) interleukin 28 receptor,
           alpha isoform 3; class II cytokine receptor CRF2/12;
           interferon lambda, receptor 1; interleukin or cytokine
           receptor 2; interleukin 28 receptor A [Homo sapiens]
          Length = 244

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 40/173 (23%), Positives = 63/173 (36%), Gaps = 4/173 (2%)
 Frame = +1

Query: 151 GATTLMLVAGAPWVLPAGGADLRSPENVVVSIIDDNFILKWKXXXXXXXXXXXXADYQIT 330
           G   L L+  AP     G   L  P+NV +   + +  L W               YQ +
Sbjct: 8   GPLLLCLLQAAP-----GRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQSS 62

Query: 331 GMDN-WIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQE 507
                W ++  C       C+   +K + +Y K K R+R  + +S SPW E E      E
Sbjct: 63  PTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYLFE 122

Query: 508 AQIGPPDVHLEAEDKAIIINLS---PPGTKNSVMWAMDSSSFVYSLVIWKNSS 657
            +  PP + L   ++ +  N +   PP         M      Y +  WK  +
Sbjct: 123 VEPAPPVLVLTQTEEILSANATYQLPP--------CMPPLDLKYEVAFWKEGA 167



>gi|28416909|ref|NP_775087.1| (NM_173064) interleukin 28 receptor,
           alpha isoform 2; class II cytokine receptor CRF2/12;
           interferon lambda, receptor 1; interleukin or cytokine
           receptor 2; interleukin 28 receptor A [Homo sapiens]
          Length = 491

 Score = 43.5 bits (101), Expect = 6e-04
 Identities = 40/173 (23%), Positives = 63/173 (36%), Gaps = 4/173 (2%)
 Frame = +1

Query: 151 GATTLMLVAGAPWVLPAGGADLRSPENVVVSIIDDNFILKWKXXXXXXXXXXXXADYQIT 330
           G   L L+  AP     G   L  P+NV +   + +  L W               YQ +
Sbjct: 8   GPLLLCLLQAAP-----GRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAYQSS 62

Query: 331 GMDN-WIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQE 507
                W ++  C       C+   +K + +Y K K R+R  + +S SPW E E      E
Sbjct: 63  PTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDYLFE 122

Query: 508 AQIGPPDVHLEAEDKAIIINLS---PPGTKNSVMWAMDSSSFVYSLVIWKNSS 657
            +  PP + L   ++ +  N +   PP         M      Y +  WK  +
Sbjct: 123 VEPAPPVLVLTQTEEILSANATYQLPP--------CMPPLDLKYEVAFWKEGA 167


  Database: RefSeq (Homo Sapiens/Amino Acid)
    Posted date:  Jul 1, 2003  6:07 AM
  Number of letters in database: 10,046,356
  Number of sequences in database:  19,244

Lambda     K      H
   0.318    0.135    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50772815
Number of Sequences: 19244
Number of extensions: 1256830
Number of successful extensions: 4239
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1983
Number of HSP's successfully gapped in prelim test: 222
Number of HSP's that attempted gapping in prelim test: 1316
Number of HSP's gapped (non-prelim): 3129
length of query: 827
length of database: 10,046,356
effective HSP length: 49
effective length of query: 778
effective length of database: 9,103,400
effective search space: 7082445200
effective search space used: 7082445200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)

Search to RefSeq (Mouse) database

Query= 20030531C-003184 (20030531C-003184) 20030531C-003184
         (2483 letters)

Database: RefSeq (Mus Musculus/Amino Acid)
           15,330 sequences; 7,155,815 total letters

Searching..................................................done

                                                                               Score     E
            Sequences producing significant alignments:                        (bits)  Value

Alignment   gi|6754302|ref|NP_034638.1| (NM_010508) interferon (alpha and b...   475  e-134
Alignment   gi|6680391|ref|NP_032375.1| (NM_008349) interleukin 10 receptor...    82  1e-15
Alignment   gi|6680373|ref|NP_032364.1| (NM_008338) interferon gamma recept...    76  8e-14
Alignment   gi|27370160|ref|NP_766374.1| (NM_172786) hypothetical protein E...    69  8e-12
Alignment   gi|30142711|ref|NP_839989.1| (NM_178258) interleukin 22 soluble...    46  9e-05
Alignment   gi|27807307|ref|NP_777276.1| (NM_174851) interleukin 28 recepto...    40  0.005
Alignment   gi|6680389|ref|NP_032374.1| (NM_008348) interleukin 10 receptor...    36  0.070
Alignment   gi|31560592|ref|NP_034301.2| (NM_010171) coagulation factor III...    35  0.12
Alignment   gi|30142709|ref|NP_839988.1| (NM_178257) interleukin-22 recepto...    35  0.16
Alignment   gi|22122549|ref|NP_666171.1| (NM_146059) RIKEN cDNA 2410075B13 ...    33  0.60


>gi|6754302|ref|NP_034638.1| (NM_010508) interferon (alpha and beta)
            receptor 1; interferon (alpha and beta) receptor; INF-a
            receptor [Mus musculus]
          Length = 590

 Score =  475 bits (1223), Expect = e-134
 Identities = 258/562 (45%), Positives = 355/562 (62%), Gaps = 4/562 (0%)
 Frame = +1

Query: 136  MLGFLGATTLMLVAGAPWVLP--AGGADLRSPENVVVSIIDDNFILKWKXXXXXXXXXXX 309
            ML  +GA  L+LVAGAPWVLP  AGG +L+ PEN+ V IIDDN+ LKW
Sbjct: 1    MLAVVGAAALVLVAGAPWVLPSAAGGENLKPPENIDVYIIDDNYTLKWSSHGESMGSVTF 60

Query: 310  XADYQITGMDNWIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEP 489
             A+Y+      W+K+P CQ+ T+T+C FS +   +VY K + R+RAE GNSTS W EV+P
Sbjct: 61   SAEYRTKDEAKWLKVPECQHTTTTKCEFSLLDT-NVYIKTQFRVRAEEGNSTSSWNEVDP 119

Query: 490  FIPFQEAQIGPPDVHLEAEDKAIIINLSPPGTKNSVMWAMDSSSFVYSLVIWKNSSSLEE 669
            FIPF  A + PP+V LEAEDKAI++++SPPG   + MWA++  SF Y++ IW+ SSS ++
Sbjct: 120  FIPFYTAHMSPPEVRLEAEDKAILVHISPPGQDGN-MWALEKPSFSYTIRIWQKSSSDKK 178

Query: 670  RTKTVYARDKIHQLSPETTYCLKVKAGLRSPRKVGVYSPVYCINTTVKHHLPSPENLEIN 849
               + Y  +KI +L PETTYCL+VKA   S +K   YS V CI+TTV + +P P NL+++
Sbjct: 179  TINSTYYVEKIPELLPETTYCLEVKAIHPSLKKHSNYSTVQCISTTVANKMPVPGNLQVD 238

Query: 850  AENRVYVLKWNYTYE-NVTFQAQWLHAFLKKIPEDHSDKWKQIPNCENVKTTHCVFPQNV 1026
            A+ + YVLKW+Y    +V F+AQWL  + K     HSDKWK IP C NV+TTHCVF Q+
Sbjct: 239  AQGKSYVLKWDYIASADVLFRAQWLPGYSKSSSGSHSDKWKPIPTCANVQTTHCVFSQDT 298

Query: 1027 FTKGIFFIRVQASNGNSTSLWSEEKRFNTEMQTILFPPVINMKPINDASLRVGIGAPKES 1206
               G FF+ VQAS GN TS WSEEK  +++   +  PPVI +  ++D +L V +     +
Sbjct: 299  VYTGTFFLHVQASEGNHTSFWSEEKFIDSQKHILPPPPVITVTAMSD-TLLVYVNCQDST 357

Query: 1207 EDKSVNQLYPLIYEVIFRENTSDTERDVLEKRTDFTFSNLKPLTVYCVKARALIENDRWN 1386
             D        L YE+IF ENTS+T+  + +   +FT  NL+PLTVYCV+AR L      N
Sbjct: 358  CD-------GLNYEIIFWENTSNTKISMEKDGPEFTLKNLQPLTVYCVQARVLF-RALLN 409

Query: 1387 RSSVFSDTVCEKTKPGSTSQAWLIAGILSAILLFPAVFYGVKVVSRCINYVFFPSSKPPS 1566
            ++S FS+ +CEKT+PGS S  W+I G L  +     V Y ++ V + + +V FP  KPP
Sbjct: 410  KTSNFSEKLCEKTRPGSFSTIWIITG-LGVVFFSVMVLYALRSVWKYLCHVCFPPLKPPR 468

Query: 1567 TIDEYFAEQPLKNLLLSTSEEQTEICFIVXXXXXXXXXXXXXXXXXXHSRCSSQTNRDSG 1746
            +IDE+F+E P KNL+L T+EE TE CFI+                    + SSQT++DSG
Sbjct: 469  SIDEFFSEPPSKNLVLLTAEEHTERCFIIENTDTVAVEVKHAPEEDLR-KYSSQTSQDSG 527

Query: 1747 VYSNEDENS-GSKIGEEILRQA 1809
             YSNE+E S G++ G+ +L +A
Sbjct: 528  NYSNEEEESVGTESGQAVLSKA 549



>gi|6680391|ref|NP_032375.1| (NM_008349) interleukin 10 receptor,
           beta [Mus musculus]
          Length = 349

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 5/218 (2%)
 Frame = +1

Query: 190 VLPAGGADLRSPENVVVSIIDDNFILKWKXXXXXXXXXXXXADYQI--TGMDNWIKLPGC 363
           ++PA G  +  PE V ++ ++   IL+W+            A Y+   +  D+      C
Sbjct: 14  LVPALGM-IPPPEKVRMNSVNFKNILQWEVPAFPKTNLTFTAQYESYRSFQDH------C 66

Query: 364 QYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQEAQIGPPDVHLEA 543
           +   ST+C+FS +   S Y    +R+RAE  +  S W  V  F P ++  IGPP++ +E+
Sbjct: 67  KRTASTQCDFSHL---SKYGDYTVRVRAELADEHSEWVNVT-FCPVEDTIIGPPEMQIES 122

Query: 544 EDKAIIINLSPPGTKNSV-MWAMDS--SSFVYSLVIWKNSSSLEERTKTVYARDKIHQLS 714
             +++ +  S P  +N    W + +   S+ Y +  WKN ++ + +  + Y  + +  L
Sbjct: 123 LAESLHLRFSAPQIENEPETWTLKNIYDSWAYRVQYWKNGTNEKFQVVSPYDSEVLRNLE 182

Query: 715 PETTYCLKVKAGLRSPRKVGVYSPVYCINTTVKHHLPS 828
           P TTYC++V+  L    + G +S   C  T      PS
Sbjct: 183 PWTTYCIQVQGFLLDQNRTGEWSEPICERTGNDEITPS 220


 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 59/236 (25%), Positives = 112/236 (47%), Gaps = 9/236 (3%)
 Frame = +1

Query: 820  LPSPENLEINAENRVYVLKWN---YTYENVTFQAQW--LHAFLKKIPEDHSDKWKQIPNC 984
            +P PE + +N+ N   +L+W    +   N+TF AQ+    +F     +DH         C
Sbjct: 21   IPPPEKVRMNSVNFKNILQWEVPAFPKTNLTFTAQYESYRSF-----QDH---------C 66

Query: 985  ENVKTTHCVFPQNVFTKGIFFIRVQASNGNSTSLWSEEKRFNTEMQTILFPPVINMKPIN 1164
            +   +T C F  ++   G + +RV+A   +  S W        E  TI+ PP + ++ +
Sbjct: 67   KRTASTQCDF-SHLSKYGDYTVRVRAELADEHSEWVNVTFCPVE-DTIIGPPEMQIESLA 124

Query: 1165 DASLRVGIGAPK---ESEDKSVNQLYPL-IYEVIFRENTSDTERDVLEKRTDFTFSNLKP 1332
            + SL +   AP+   E E  ++  +Y    Y V + +N ++ +  V+         NL+P
Sbjct: 125  E-SLHLRFSAPQIENEPETWTLKNIYDSWAYRVQYWKNGTNEKFQVVSPYDSEVLRNLEP 183

Query: 1333 LTVYCVKARALIENDRWNRSSVFSDTVCEKTKPGSTSQAWLIAGILSAILLFPAVF 1500
             T YC++ +  + +   NR+  +S+ +CE+T     + +W++A IL   +L   +F
Sbjct: 184  WTTYCIQVQGFLLDQ--NRTGEWSEPICERTGNDEITPSWIVAIILIVSVLVVFLF 237



>gi|6680373|ref|NP_032364.1| (NM_008338) interferon gamma receptor 2
           [Mus musculus]
          Length = 332

 Score = 75.9 bits (185), Expect = 8e-14
 Identities = 60/228 (26%), Positives = 105/228 (45%), Gaps = 13/228 (5%)
 Frame = +1

Query: 163 LMLVAGAPWVLPAGGADLRSPENVVVSIIDDNFILKWKXXXXXXXXXXXXADYQITGMD- 339
           L+   GA    P   + L +P N  + + +D  IL W+               + + +D
Sbjct: 12  LLCGLGAAASSPDSFSQLAAPLNPRLHLYNDEQILTWEPSPSSNDPRPVVYQVEYSFIDG 71

Query: 340 NWIKL--PGCQYVTSTECNFSS---IKLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQ 504
           +W +L  P C  +T T+C+ +    +KL      + LR+RA+ GN TS W  +EPF  ++
Sbjct: 72  SWHRLLEPNCTDITETKCDLTGGGRLKLFPHPFTVFLRVRAKRGNLTSKWVGLEPFQHYE 131

Query: 505 EAQIGPP-DVHLEAEDKAIIINLSPPGTKNSVMWAMDSSSFVYSLVIWKNSSSLEERTKT 681
              +GPP ++ +     +++I+ SPP            ++F Y +  W+ S + +E+ +
Sbjct: 132 NVTVGPPKNISVTPGKGSLVIHFSPP------FDVFHGATFQYLVHYWEKSETQQEQVEG 185

Query: 682 VYARDKI--HQLSPETTYCLKVKAGL----RSPRKVGVYSPVYCINTT 807
            +  + I    L P   YCL+ +A L    +  R  G+ S V C  TT
Sbjct: 186 PFKSNSIVLGNLKPYRVYCLQTEAQLILKNKKIRPHGLLSNVSCHETT 233


 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 69/284 (24%), Positives = 122/284 (42%), Gaps = 27/284 (9%)
 Frame = +1

Query: 820  LPSPENLEINAENRVYVLKWNYTYEN-----VTFQAQWLHAFLKKIPEDHSDKWKQI--P 978
            L +P N  ++  N   +L W  +  +     V +Q ++  +F+          W ++  P
Sbjct: 29   LAAPLNPRLHLYNDEQILTWEPSPSSNDPRPVVYQVEY--SFI-------DGSWHRLLEP 79

Query: 979  NCENVKTTHC---------VFPQNVFTKGIFFIRVQASNGNSTSLWSEEKRF-NTEMQTI 1128
            NC ++  T C         +FP + FT    F+RV+A  GN TS W   + F + E  T+
Sbjct: 80   NCTDITETKCDLTGGGRLKLFP-HPFT---VFLRVRAKRGNLTSKWVGLEPFQHYENVTV 135

Query: 1129 LFPPVINMKPINDASLRVGIGAPKESEDKSVNQLYPLIYEVIFRENTSDTERDVLE---K 1299
              P  I++ P    SL +    P +    +  Q     Y V + E  S+T+++ +E   K
Sbjct: 136  GPPKNISVTP-GKGSLVIHFSPPFDVFHGATFQ-----YLVHYWEK-SETQQEQVEGPFK 188

Query: 1300 RTDFTFSNLKPLTVYCV--KARALIENDRWNRSSVFSDTVCEKTKPGSTSQAWLI----A 1461
                   NLKP  VYC+  +A+ +++N +     + S+  C +T   ++++   +
Sbjct: 189  SNSIVLGNLKPYRVYCLQTEAQLILKNKKIRPHGLLSNVSCHETTANASARLQQVILIPL 248

Query: 1462 GILSAIL-LFPAVFYGVKVVSRCINYVFFPSSKPPSTIDEYFAE 1590
            GI + +L L  A F         + Y F      P  I+EY  +
Sbjct: 249  GIFALLLGLTGACFTLFLKYQSRVKYWFQAPPNIPEQIEEYLKD 292



>gi|27370160|ref|NP_766374.1| (NM_172786) hypothetical protein
           E230031K19 [Mus musculus]
          Length = 546

 Score = 69.3 bits (168), Expect = 8e-12
 Identities = 52/223 (23%), Positives = 90/223 (40%), Gaps = 7/223 (3%)
 Frame = +1

Query: 157 TTLMLVAGAPWVLPAGGADLRSPENVVVSIIDDNFILKWKX-XXXXXXXXXXXADYQITG 333
           T L+L+A +   +P     L  P N+    I+   +L W                Y I G
Sbjct: 21  TLLLLLAASGRAVPCVFCGLPKPTNITFLSINMKNVLHWNPPESLHGVEVTYTVQYFIYG 80

Query: 334 MDNWIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQEAQ 513
              W+    C  +  T C+ S ++      +   +++A      S W E E F PF E Q
Sbjct: 81  QKKWLNASKCGSINRTYCDLS-VETSDYEHQFYAKVKAIWEARCSEWAETERFYPFLETQ 139

Query: 514 IGPPDVHLEAEDKAIIINLSPP------GTKNSVMWAMDSSSFVYSLVIWKNSSSLEERT 675
           + PP+V L   +K+I I L+ P         ++V       +  Y++ ++   S
Sbjct: 140 VSPPEVALTTGEKSISIALTAPEKWKRNPQDHTVSMQQIYPNLKYNVSVYNTKSRRTWSQ 199

Query: 676 KTVYARDKIHQLSPETTYCLKVKAGLRSPRKVGVYSPVYCINT 804
               +   +  L P T YC+ V++ +  P ++ + S   CI+T
Sbjct: 200 CVTNSTLVLSWLEPNTLYCVHVESLVPGPPRLPMPSQKQCIST 242


 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 61/264 (23%), Positives = 103/264 (38%), Gaps = 13/264 (4%)
 Frame = +1

Query: 820  LPSPENLEINAENRVYVLKWNYTYE----NVTFQAQWLHAFLKKIPEDHSDKWKQIPNCE 987
            LP P N+   + N   VL WN         VT+  Q+     KK        W     C
Sbjct: 40   LPKPTNITFLSINMKNVLHWNPPESLHGVEVTYTVQYFIYGQKK--------WLNASKCG 91

Query: 988  NVKTTHC-VFPQNVFTKGIFFIRVQASNGNSTSLWSEEKRFNTEMQTILFPPVINMKPIN 1164
            ++  T+C +  +    +  F+ +V+A      S W+E +RF   ++T + PP + +
Sbjct: 92   SINRTYCDLSVETSDYEHQFYAKVKAIWEARCSEWAETERFYPFLETQVSPPEVAL-TTG 150

Query: 1165 DASLRVGIGAPK------ESEDKSVNQLYP-LIYEVIFRENTSDTERDVLEKRTDFTFSN 1323
            + S+ + + AP+      +    S+ Q+YP L Y V      S          +    S
Sbjct: 151  EKSISIALTAPEKWKRNPQDHTVSMQQIYPNLKYNVSVYNTKSRRTWSQCVTNSTLVLSW 210

Query: 1324 LKPLTVYCVKARALIENDRWNRSSVFSDTVCEKTKPGSTSQAWLIAGILSAILLFPAVFY 1503
            L+P T+YCV   +L+      R  + S   C  T    TS AW    I   + L   + +
Sbjct: 211  LEPNTLYCVHVESLVPGP--PRLPMPSQKQCISTLEVQTS-AWKAKVIFWYVFLTSVIVF 267

Query: 1504 GVKVVSRCI-NYVFFPSSKPPSTI 1572
                +   +  Y+     K P+ +
Sbjct: 268  LFSAIGYLVYRYIHVGKEKHPANL 291



>gi|30142711|ref|NP_839989.1| (NM_178258) interleukin 22 soluble
            receptor [Mus musculus]
          Length = 230

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 46/206 (22%), Positives = 82/206 (39%), Gaps = 24/206 (11%)
 Frame = +1

Query: 811  KHHLPSPENLEINAENRVYVLKWNYTYENVTFQAQWLHAFL-----KKIPEDHS------ 957
            KH L     + +++   +   + + T + V FQ++  H  L       +P ++S
Sbjct: 4    KHCLLGLLIILLSSATEIQPARVSLTPQKVRFQSRNFHNILHWQAGSSLPSNNSIYFVQY 63

Query: 958  -----DKWKQIPNCENVKTTHCVFPQNVFTK-GIFFIRVQASNGNSTSLWSEEKRFNTEM 1119
                  +W+   +C       C           +++ RV  +     S W+   RF
Sbjct: 64   KMYGQSQWEDKVDCWGTTALFCDLTNETLDPYELYYGRVMTACAGRHSAWTRTPRFTPWW 123

Query: 1120 QTILFPPVINMKPINDASLRVGIGAP------KESEDKSVNQLYPLIYEVIFRENTSDTE 1281
            +T L PPV+ +  +N ASLRV +  P      +  ++ S+   Y L+Y V    N+ + E
Sbjct: 124  ETKLDPPVVTITRVN-ASLRVLLRPPDLPNRNQSGKNASMETYYGLVYRVFTINNSLEKE 182

Query: 1282 RDVLE-KRTDFTFSNLKPLTVYCVKA 1356
            +   E  +       L P + YCV A
Sbjct: 183  QKAYEGTQRAVEIEGLIPHSSYCVVA 208


 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 45/207 (21%), Positives = 85/207 (40%), Gaps = 7/207 (3%)
 Frame = +1

Query: 136 MLGFLGATTLMLVAGAPWVLPAGGADLRSPENVVVSIIDDNFILKWKXXXXX-XXXXXXX 312
           +LG L    ++L++ A  + PA  +   +P+ V     + + IL W+
Sbjct: 7   LLGLL----IILLSSATEIQPARVS--LTPQKVRFQSRNFHNILHWQAGSSLPSNNSIYF 60

Query: 313 ADYQITGMDNWIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPF 492
             Y++ G   W     C   T+  C+ ++  L   YE    R+        S W     F
Sbjct: 61  VQYKMYGQSQWEDKVDCWGTTALFCDLTNETLDP-YELYYGRVMTACAGRHSAWTRTPRF 119

Query: 493 IPFQEAQIGPPDVHLEAEDKAIIINLSPPGTKNSVMWAMDSSSFVYSLVIWK---NSSSL 663
            P+ E ++ PP V +   + ++ + L PP   N      ++S   Y  ++++    ++SL
Sbjct: 120 TPWWETKLDPPVVTITRVNASLRVLLRPPDLPNRNQSGKNASMETYYGLVYRVFTINNSL 179

Query: 664 EERTKTVYARDK---IHQLSPETTYCL 735
           E+  K      +   I  L P ++YC+
Sbjct: 180 EKEQKAYEGTQRAVEIEGLIPHSSYCV 206



>gi|27807307|ref|NP_777276.1| (NM_174851) interleukin 28 receptor
           alpha; class II cytokine receptor 12; interferon-lambda
           receptor 1 [Mus musculus]
          Length = 535

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 33/152 (21%), Positives = 54/152 (34%), Gaps = 3/152 (1%)
 Frame = +1

Query: 202 GGADLRSPENVVVSIIDDNFILKWKXXXXXXXXXXXXADYQITGMDNWIKLPGCQYVTST 381
           G   L  P NV +   +    L W               YQ      W  +  C  + +
Sbjct: 20  GRPRLAPPRNVTLFSQNFTVYLTWLPGLGSPPNVTYFVTYQSYIKTGWRPVEHCAGIKAL 79

Query: 382 ECNFSSIKLKSVYEKIKLRIRAETGNSTSPWYEVEPFIPFQEAQIGPPDVHLEAEDKAII 561
            C    +K  ++Y K K R++A + +  SP  E        + ++ PP + L   +K +
Sbjct: 80  VCPLMCLKKLNLYSKFKGRVQAASAHGRSPRVESRYLEYLFDVELAPPTLVLTQMEKILR 139

Query: 562 INLS---PPGTKNSVMWAMDSSSFVYSLVIWK 648
           +N +   PP         M S    Y +  WK
Sbjct: 140 VNATYQLPP--------CMPSLELKYQVEFWK 163



>gi|6680389|ref|NP_032374.1| (NM_008348) interleukin 10 receptor,
           alpha [Mus musculus]
          Length = 575

 Score = 36.2 bits (82), Expect = 0.070
 Identities = 49/217 (22%), Positives = 80/217 (36%), Gaps = 10/217 (4%)
 Frame = +1

Query: 199 AGGADLRSPENVVVSIIDDNFILKWKXXXXXXXXXXXXADYQITGMDNWIKLPGCQYVTS 378
           A G +L SP  V         IL WK               +  G   W  +  C+   +
Sbjct: 21  AYGTELPSPSYVWFEARFFQHILHWKPIPNQSESTYYEVALKQYGNSTWNDIHICRKAQA 80

Query: 379 TECNFSSIKLKSVYEKI--KLRIRAETGNSTSPWYEVEPFIPFQEAQIGPPDVHLEAEDK 552
             C+ ++  L   +     + R+RA   +  S W   E      E  +    V L+A D
Sbjct: 81  LSCDLTTFTLDLYHRSYGYRARVRAVDNSQYSNWTTTETRFTVDEVILTVDSVTLKAMDG 140

Query: 553 AIIINLSPPGTKNSVMWAMDSSSFVY-SLVIWKNS----SSLEERTKTVYARDKIHQLSP 717
            I   + PP  + ++  A D    V+  L ++K S    S L+  TK V  + +   L+
Sbjct: 141 IIYGTIHPP--RPTITPAGDEYEQVFKDLRVYKISIRKFSELKNATKRV--KQETFTLTV 196

Query: 718 E---TTYCLKVKAGLRSPRKVGVYSPVYCINTTVKHH 819
                 +C+KV   L S      +S   C+  T + +
Sbjct: 197 PIGVRKFCVKVLPRLESRINKAEWSEEQCLLITTEQY 233



>gi|31560592|ref|NP_034301.2| (NM_010171) coagulation factor III;
            tissue factor [Mus musculus]
          Length = 294

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 58/284 (20%), Positives = 107/284 (37%), Gaps = 28/284 (9%)
 Frame = +1

Query: 760  PRKVGVYSPVY--CINTTVKHHLPSPE---NLEINAENRVYVLKWNYTYENVTFQAQWLH 924
            PR +   +P +  C+   V      PE   NL   + +   +L+W     N T+  Q
Sbjct: 7    PRLLAALAPTFLGCLLLQVTAGAGIPEKAFNLTWISTDFKTILEWQPKPTNYTYTVQI-- 64

Query: 925  AFLKKIPEDHSDKWKQIPNCENVKTTHCVFPQNVF--------TKGIFFIRVQASNGNST 1080
                    D S  WK    C +   T C     +          K +   R  + +G+
Sbjct: 65   -------SDRSRNWKN--KCFSTTDTECDLTDEIVKDVTWAYEAKVLSVPRRNSVHGDGD 115

Query: 1081 SL--------WSEEKRFNTEMQTILFPPVINMKPINDASLRVGIG-----APKESEDKSV 1221
             L        ++   +F     T L  PVI     N   L V +        K     ++
Sbjct: 116  QLVIHGEEPPFTNAPKFLPYRDTNLGQPVIQQFEQNGRKLNVVVKDSLTLVRKNGTFLTL 175

Query: 1222 NQLY--PLIYEVIFRENTSDTERDVLEKRTDFTFSNLKPLTVYCVKARALIENDRWNRSS 1395
             Q++   L Y + +R+ +S  ++  +    +F+  +++    YC   +A+I + + N++S
Sbjct: 176  RQVFGKDLGYIITYRKGSSTGKKTNITNTNEFSI-DVEEGVSYCFFVQAMIFSRKTNQNS 234

Query: 1396 VFSDTVCEKTKPGSTSQAWLIAGILSAILLFPAVFYGVKVVSRC 1527
              S TVC +       +  +I G   A++L   +F  +  +S C
Sbjct: 235  PGSSTVCTEQWKSFLGETLIIVG---AVVLLATIFIILLSISLC 275



>gi|30142709|ref|NP_839988.1| (NM_178257) interleukin-22 receptor
           alpha chain [Mus musculus]
          Length = 581

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 21/90 (23%), Positives = 34/90 (37%)
 Frame = +1

Query: 262 ILKWKXXXXXXXXXXXXADYQITGMDNWIKLPGCQYVTSTECNFSSIKLKSVYEKIKLRI 441
           IL W              +Y+  G   W+   GCQ +T   CN  +++ ++  E    ++
Sbjct: 38  ILTWDGGPASTSDTVYSVEYKKYGERKWLAKAGCQRITQKFCNL-TMETRNHTEFYYAKV 96

Query: 442 RAETGNSTSPWYEVEPFIPFQEAQIGPPDV 531
            A +          + F   Q   I PPDV
Sbjct: 97  TAVSAGGPPVTKMTDRFSSLQHTTIKPPDV 126



>gi|22122549|ref|NP_666171.1| (NM_146059) RIKEN cDNA 2410075B13 [Mus
            musculus]
          Length = 287

 Score = 33.1 bits (74), Expect = 0.60
 Identities = 16/35 (45%), Positives = 24/35 (67%)
 Frame = -1

Query: 2156 RLTQAQPSARGARVPAVTSGRWRASSGFNASHPRP 2052
            R++ A PS +G+RVP++TSG  R+  G   S P+P
Sbjct: 203  RVSSATPSRKGSRVPSMTSGTLRSREGSRIS-PQP 236


  Database: RefSeq (Mus Musculus/Amino Acid)
    Posted date:  Jul 1, 2003  6:07 AM
  Number of letters in database: 7,155,815
  Number of sequences in database:  15,330

Lambda     K      H
   0.318    0.135    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36217274
Number of Sequences: 15330
Number of extensions: 891524
Number of successful extensions: 2859
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1798
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 546
Number of HSP's gapped (non-prelim): 2379
length of query: 827
length of database: 7,155,815
effective HSP length: 49
effective length of query: 778
effective length of database: 6,404,645
effective search space: 4982813810
effective search space used: 4982813810
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)