Search to RefSeq (Human) database
Query= 20040204S-018717 (20040204S-018717) 20040204S-018717
(736 letters)
Database: RefSeq (Homo Sapiens/Amino Acid)
27,437 sequences; 13,743,509 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|14192943|ref|NP_115822.1| MEGF10 protein [Homo sapiens] 123 1e-28
Alignment gi|14192941|ref|NP_115821.1| MEGF11 protein [Homo sapiens] 93 2e-19
Alignment gi|41188798|ref|XP_371320.1| similar to MEGF12 [Homo sapiens] 75 3e-14
Alignment gi|41107704|ref|XP_031401.4| EGF-like-domain, multiple 3 [Homo s... 64 8e-11
Alignment gi|4557869|ref|NP_000450.1| TEK tyrosine kinase, endothelial [Ho... 54 1e-07
Alignment gi|4885631|ref|NP_005415.1| tyrosine kinase with immunoglobulin ... 54 1e-07
Alignment gi|33598933|ref|NP_663326.1| scavenger receptor class F, member ... 52 3e-07
Alignment gi|33598935|ref|NP_663327.1| scavenger receptor class F, member ... 52 3e-07
Alignment gi|33598927|ref|NP_663324.1| scavenger receptor class F, member ... 52 3e-07
Alignment gi|33598929|ref|NP_003684.2| scavenger receptor class F, member ... 52 3e-07
>gi|14192943|ref|NP_115822.1| MEGF10 protein [Homo sapiens]
Length = 1140
Score = 123 bits (309), Expect = 1e-28
Identities = 53/64 (82%), Positives = 54/64 (84%), Gaps = 4/64 (6%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
CH + C SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT
Sbjct: 550 CHPTTGHCRCLPGWSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 609
Query: 463 TCQR 474
TCQR
Sbjct: 610 TCQR 613
Score = 66.6 bits (161), Expect = 2e-11
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
G +C S C WGP+C+ C CKNGA C+P G C CA GFRG C+
Sbjct: 132 GTNCSSACDGDHWGPHCTSRCQCKNGALCNPITGACHCAAGFRGWRCE 179
Score = 62.8 bits (151), Expect = 2e-10
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
GV C C G WG C+L C C NG +C+ DG C CAPG+RG C+
Sbjct: 479 GVDCSIRCPSGTWGFGCNLTCQCLNGGACNTLDGTCTCAPGWRGEKCE 526
Score = 60.8 bits (146), Expect = 9e-10
Identities = 26/63 (41%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
CH + C G C C EGR+G NCS C C NG +C G C C+PG+ G
Sbjct: 246 CHHVTGECSCPSGWMGTVCGQPCPEGRFGKNCSQECQCHNGGTCDAATGQCHCSPGYTGE 305
Query: 463 TCQ 471
CQ
Sbjct: 306 RCQ 308
Score = 60.8 bits (146), Expect = 9e-10
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +1
Query: 292 NCHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRG 459
+CH S C SG++C+ C+ G +G C C C+NGA C G C CAPGF+G
Sbjct: 377 SCHPMSGECACKPGWSGLYCNETCSPGFYGEACQQICSCQNGADCDSVTGKCTCAPGFKG 436
Query: 460 TTC 468
C
Sbjct: 437 IDC 439
Score = 59.7 bits (143), Expect = 2e-09
Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTC-QRSKCLFRGQ 498
G C C WGPNC C C NGA CS DG C+C PG+ G C QR F G+
Sbjct: 696 GSDCSQPCPPAHWGPNCIHTCNCHNGAFCSAYDGECKCTPGWTGLYCTQRCPLGFYGK 753
Score = 59.3 bits (142), Expect = 3e-09
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
CH + LC +G C+ VC GR+G NC+ C C N +C+P D C+C PG+ G+
Sbjct: 638 CHHITGLCDCLPGFTGALCNEVCPSGRFGKNCAGICTCTNNGTCNPIDRSCQCYPGWIGS 697
Query: 463 TCQR 474
C +
Sbjct: 698 DCSQ 701
Score = 58.2 bits (139), Expect = 6e-09
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 292 NCHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRG 459
+C S + C + G+ C + C G +G NCS C CKN A CSP DG C C G+ G
Sbjct: 420 DCDSVTGKCTCAPGFKGIDCSTPCPLGTYGINCSSRCGCKNDAVCSPVDGSCTCKAGWHG 479
Query: 460 TTC 468
C
Sbjct: 480 VDC 482
Score = 54.7 bits (130), Expect = 6e-08
Identities = 23/64 (35%), Positives = 32/64 (50%)
Frame = +1
Query: 280 PTLTNCHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRG 459
P CH A+ G C+ C +G +G +C C C+NGA+C G C C PG+ G
Sbjct: 162 PITGACHCAAGF---RGWRCEDRCEQGTYGNDCHQRCQCQNGATCDHVTGECRCPPGYTG 218
Query: 460 TTCQ 471
C+
Sbjct: 219 AFCE 222
Score = 53.1 bits (126), Expect = 2e-07
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +1
Query: 325 SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRSKC 483
+G++C C G +G +C+L C C+NGA C G C C GF G C++ KC
Sbjct: 738 TGLYCTQRCPLGFYGKDCALICQCQNGADCDHISGQCTCRTGFMGRHCEQ-KC 789
Score = 51.6 bits (122), Expect = 5e-07
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +1
Query: 325 SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTC 468
+G C+ +C G+ GP C C C+NG C G C C G+ GT C
Sbjct: 217 TGAFCEDLCPPGKHGPQCEQRCPCQNGGVCHHVTGECSCPSGWMGTVC 264
Score = 51.2 bits (121), Expect = 7e-07
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRSKCLFRG 495
G HC+ C G +G C C C N ++C G C C+PG++G C ++ + G
Sbjct: 782 GRHCEQKCPSGTYGYGCRQICDCLNNSTCDHITGTCYCSPGWKGARCDQAGVIIVG 837
Score = 48.5 bits (114), Expect = 4e-06
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTC 468
G C+ C +G +G NC+ C C + C P G C C PG+ G C
Sbjct: 522 GEKCELPCQDGTYGLNCAERCDCSHADGCHPTTGHCRCLPGWSGVHC 568
Score = 48.1 bits (113), Expect = 6e-06
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
C +A+ C S G C C G +G C+ C C NG C G C C GF G
Sbjct: 289 CDAATGQCHCSPGYTGERCQDECPVGTYGVLCAETCQCVNGGKCYHVSGACLCEAGFAGE 348
Query: 463 TCQRSKC 483
C+ C
Sbjct: 349 RCEARLC 355
Score = 47.8 bits (112), Expect = 8e-06
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHCDS-VCAEGRWGPNCS--LPCYCKNGASCSPDDGICECAPGF 453
C+ S CL +G C++ +C EG +G C PC+ +N SC P G C C PG+
Sbjct: 332 CYHVSGACLCEAGFAGERCEARLCPEGLYGIKCDKRCPCHLENTHSCHPMSGECACKPGW 391
Query: 454 RGTTCQRS 477
G C +
Sbjct: 392 SGLYCNET 399
Score = 42.0 bits (97), Expect = 4e-04
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPC-YCKNGAS-CSPDDGICECAPGFRGTTC 468
G C +C+ G +G CS C C + + C G+C+C PGF G C
Sbjct: 608 GTTCQRICSPGFYGHRCSQTCPQCVHSSGPCHHITGLCDCLPGFTGALC 656
>gi|14192941|ref|NP_115821.1| MEGF11 protein [Homo sapiens]
Length = 969
Score = 92.8 bits (229), Expect = 2e-19
Identities = 35/50 (70%), Positives = 40/50 (80%)
Frame = +1
Query: 325 SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
+G+ CDS C GRWGPNCS+ C C+NG SCSP+DG CECAPGFRG CQR
Sbjct: 483 TGIRCDSTCPPGRWGPNCSVSCSCENGGSCSPEDGSCECAPGFRGPLCQR 532
Score = 65.9 bits (159), Expect = 3e-11
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
G+ C C G WG NC+ C C NGA+CSP DG C C PG+ G TC+
Sbjct: 398 GLDCTLPCPSGTWGLNCNESCTCANGAACSPIDGSCSCTPGWLGDTCE 445
Score = 65.5 bits (158), Expect = 4e-11
Identities = 28/63 (44%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 292 NCHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRG 459
+CH + C SG HC+ C G +G C LPC C+NGA C G C CAPGF G
Sbjct: 296 SCHPVTGACTCQPGWSGHHCNESCPVGYYGDGCQLPCTCQNGADCHSITGGCTCAPGFMG 355
Query: 460 TTC 468
C
Sbjct: 356 EVC 358
Score = 64.3 bits (155), Expect = 8e-11
Identities = 28/58 (48%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTC-QRSKCLFRGQ 498
G C C G WGP C C C NGASCS +DG C C PG+ G C QR F G+
Sbjct: 615 GKDCSQACPPGFWGPACFHACSCHNGASCSAEDGACHCTPGWTGLFCTQRCPAAFFGK 672
Score = 63.9 bits (154), Expect = 1e-10
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
C+ + C+ + G C+ +CA G G C LPC C++GASC P G C CAPG+ G
Sbjct: 79 CNPITGACVCAAGFRGWRCEELCAPGTHGKGCQLPCQCRHGASCDPRAGECLCAPGYTGV 138
Query: 463 TCQ 471
C+
Sbjct: 139 YCE 141
Score = 63.2 bits (152), Expect = 2e-10
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
G C S C WGP+CS C C+NGA C+P G C CA GFRG C+
Sbjct: 51 GPDCSSGCDSDHWGPHCSNRCQCQNGALCNPITGACVCAAGFRGWRCE 98
Score = 63.2 bits (152), Expect = 2e-10
Identities = 36/94 (38%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +1
Query: 208 PCPLLPGV-SQF*DHDLVSHLAFQMPTLTN-CHSASPLCLVSGVHCDSVCAEGRWGPNCS 381
PCP PG Q D H Q +T CH + G C C G +G CS
Sbjct: 186 PCP--PGTFGQNCSQDCPCHHGGQCDHVTGQCHCTAGYM---GDRCQEECPFGSFGFQCS 240
Query: 382 LPCYCKNGASCSPDDGICECAPGFRGTTCQRSKC 483
C C NG CSP G CEC PG++G CQ C
Sbjct: 241 QRCDCHNGGQCSPTTGACECEPGYKGPRCQERLC 274
Score = 62.8 bits (151), Expect = 2e-10
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +1
Query: 292 NCHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRG 459
+CHS + C + G C CA G +GPNCS C C NG +CSP DG C C G++G
Sbjct: 339 DCHSITGGCTCAPGFMGEVCAVSCAAGTYGPNCSSICSCNNGGTCSPVDGSCTCKEGWQG 398
Query: 460 TTC 468
C
Sbjct: 399 LDC 401
Score = 62.4 bits (150), Expect = 3e-10
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
CH S +C SG C+ VCA G +G +C+ C C N +CSP DG C+C PG+ G
Sbjct: 557 CHHISGICECLPGFSGALCNQVCAGGYFGQDCAQLCSCANNGTCSPIDGSCQCFPGWIGK 616
Query: 463 TCQRS 477
C ++
Sbjct: 617 DCSQA 621
Score = 54.7 bits (130), Expect = 6e-08
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1
Query: 325 SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTC 468
+GV+C+ +C G G +C L C C+NG +C G C C PG+ G C
Sbjct: 136 TGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVC 183
Score = 54.7 bits (130), Expect = 6e-08
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +1
Query: 325 SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRS 477
+G HC+ CA G +G C C C N ++C G C C+PGF+G C ++
Sbjct: 700 TGQHCEQRCAPGTFGYGCQQLCECMNNSTCDHVTGTCYCSPGFKGIRCDQA 750
Score = 50.8 bits (120), Expect = 9e-07
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 328 GVHC-DSVCAEGRWGPNCSLPCYCK--NGASCSPDDGICECAPGFRGTTCQRS 477
G C + +C EG GP C+LPC C N SC P G C C PG+ G C S
Sbjct: 266 GPRCQERLCPEGLHGPGCTLPCPCDADNTISCHPVTGACTCQPGWSGHHCNES 318
Score = 49.7 bits (117), Expect = 2e-06
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
CH + C +G C C G +G NCS C C +G C G C C G+ G
Sbjct: 165 CHHITGECACPPGWTGAVCAQPCPPGTFGQNCSQDCPCHHGGQCDHVTGQCHCTAGYMGD 224
Query: 463 TCQRSKCLF 489
CQ +C F
Sbjct: 225 RCQ-EECPF 232
Score = 48.5 bits (114), Expect = 4e-06
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 325 SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
+G+ C C +G +C C C+NGASC G C C GF G C++
Sbjct: 657 TGLFCTQRCPAAFFGKDCGRVCQCQNGASCDHISGKCTCRTGFTGQHCEQ 706
>gi|41188798|ref|XP_371320.1| similar to MEGF12 [Homo sapiens]
Length = 1020
Score = 75.5 bits (184), Expect = 3e-14
Identities = 30/50 (60%), Positives = 34/50 (68%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRS 477
G C C EG WG NCS C CKNG +C P++G C CAPGFRG +CQRS
Sbjct: 586 GARCHLSCPEGLWGVNCSNTCTCKNGGTCLPENGNCVCAPGFRGPSCQRS 635
Score = 60.8 bits (146), Expect = 9e-10
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTC 468
G C S CA G WGP C PC C N +SC P G+C C G + C
Sbjct: 128 GDDCSSECAPGMWGPQCDKPCSCGNNSSCDPKSGVCSCPSGLQPPNC 174
Score = 57.4 bits (137), Expect = 1e-08
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
CH ++ C +G C C G +G NCS PC C G C P+ G C C PG G
Sbjct: 656 CHPSNGTCYCLAGWTGPDCSQRCPLGTFGANCSQPCQCGPGEKCHPETGACVCPPGHSGA 715
Query: 463 TCQ 471
C+
Sbjct: 716 PCR 718
Score = 57.0 bits (136), Expect = 1e-08
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +1
Query: 292 NCHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRG 459
+CH + C +G+HC+ C + GP C C C +G C G+C+CAPG+ G
Sbjct: 398 SCHPMNGECSCLPGWAGLHCNESCPQDTHGPGCQEHCLCLHGGVCQATSGLCQCAPGYTG 457
Query: 460 TTC 468
C
Sbjct: 458 PHC 460
Score = 56.6 bits (135), Expect = 2e-08
Identities = 25/52 (48%), Positives = 27/52 (51%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRSKC 483
G C C EG GPNCS C C NG C G C CAPG+ G C R +C
Sbjct: 282 GTICSLPCPEGFHGPNCSQECRCHNGGLCDRFTGQCRCAPGYTGDRC-REEC 332
Score = 56.6 bits (135), Expect = 2e-08
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
C + S LC + G HC S+C +G NCS C C+N +CSP DG C C G++
Sbjct: 442 CQATSGLCQCAPGYTGPHCASLCPPDTYGVNCSARCSCENAIACSPIDGECVCKEGWQRG 501
Query: 463 TC 468
C
Sbjct: 502 NC 503
Score = 54.7 bits (130), Expect = 6e-08
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +1
Query: 334 HCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
+C C G WG +C+ C C + A CSP G C C PG+ G CQ
Sbjct: 502 NCSVPCPPGTWGFSCNASCQCAHEAVCSPQTGACTCTPGWHGAHCQ 547
Score = 49.7 bits (117), Expect = 2e-06
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHC-DSVCAEGRWGPNCSLPCYC--KNGASCSPDDGICECAPGF 453
C A+ CL +G C D +C +G +G +C PC C ++ SC P +G C C PG+
Sbjct: 353 CFPANGACLCEHGFTGDRCTDRLCPDGFYGLSCQAPCTCDREHSLSCHPMNGECSCLPGW 412
Query: 454 RGTTCQRS 477
G C S
Sbjct: 413 AGLHCNES 420
Score = 48.9 bits (115), Expect = 3e-06
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRS 477
G HC C +G++G C+ C C + C P G C+C G+ G C S
Sbjct: 543 GAHCQLPCPKGQFGEGCASRCDCDHSDGCDPVHGRCQCQAGWMGARCHLS 592
Score = 47.8 bits (112), Expect = 8e-06
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
G C C GR+G C +PC C N + C P +G C C G+ G C +
Sbjct: 629 GPSCQRSCQPGRYGKRC-VPCKCANHSFCHPSNGTCYCLAGWTGPDCSQ 676
Score = 47.0 bits (110), Expect = 1e-05
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = +1
Query: 325 SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRSKC 483
+G C C GR+G +C+ C C A C P +G C C GF G C C
Sbjct: 324 TGDRCREECPVGRFGQDCAETCDCAPDARCFPANGACLCEHGFTGDRCTDRLC 376
Score = 41.6 bits (96), Expect = 5e-04
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +1
Query: 289 TNCHSASPLCLV-SGV---HCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFR 456
++C S +C SG+ +C C G +GP C C C +GA C P G C C
Sbjct: 154 SSCDPKSGVCSCPSGLQPPNCLQPCTPGYYGPACQFRCQC-HGAPCDPQTGACFCPAERT 212
Query: 457 GTTCQRS 477
G +C S
Sbjct: 213 GPSCDVS 219
Score = 35.0 bits (79), Expect = 0.051
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 325 SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGF 453
+G CD C++G G C C+NG G C C PG+
Sbjct: 212 TGPSCDVSCSQGTSGFFCPSTHSCQNGGVFQTPQGSCSCPPGW 254
Score = 30.0 bits (66), Expect = 1.6
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +1
Query: 337 CDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
C C GR C P C+ DD ECAPG G C +
Sbjct: 105 CAQECVHGR----CVAPNQCQCVPGWRGDDCSSECAPGMWGPQCDK 146
>gi|41107704|ref|XP_031401.4| EGF-like-domain, multiple 3 [Homo
sapiens]
Length = 1229
Score = 64.3 bits (155), Expect = 8e-11
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
CH+++ C +G HC+ C GR+G C L C C N ++C P G C C PGF G
Sbjct: 1078 CHASNGSCSCGLGWTGRHCELACPPGRYGAACHLECSCHNNSTCEPATGTCRCGPGFYGQ 1137
Query: 463 TCQRSK 480
C+ +
Sbjct: 1138 ACEHRR 1143
Score = 61.2 bits (147), Expect = 7e-10
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +1
Query: 292 NCHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRG 459
+C + S LCL G C+ C +G +GP C C C++GA+C G C C G+RG
Sbjct: 776 SCDAISGLCLCEAGYVGPRCEQQCPQGHFGPGCEQRCQCQHGAACDHVSGACTCPAGWRG 835
Query: 460 TTCQRS 477
T C+ +
Sbjct: 836 TFCEHA 841
Score = 60.8 bits (146), Expect = 9e-10
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +1
Query: 292 NCHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRG 459
+C +A+ C G C+ C +GR+GPNC+ C C GA+C P G C C PG G
Sbjct: 991 SCDAATGACRCPTGFLGTDCNLTCPQGRFGPNCTHVCGCGQGAACDPVTGTCLCPPGRAG 1050
Query: 460 TTCQR 474
C+R
Sbjct: 1051 VRCER 1055
Score = 60.5 bits (145), Expect = 1e-09
Identities = 26/57 (45%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 313 LCLVS--GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRS 477
LCL G C VC G +GP+C C C N C P G C CAPG+ G +CQR+
Sbjct: 698 LCLPGFVGSRCQDVCPAGWYGPSCQTRCSCANDGHCHPATGHCSCAPGWTGFSCQRA 754
Score = 58.5 bits (140), Expect = 4e-09
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPC-YCKNGASCSPDDGICECAPGFRG 459
CH + C +G C++ C EGRWG C C C++ A C P+ G C C PGF G
Sbjct: 646 CHGVTGQCRCPPGRTGEDCEADCPEGRWGLGCQEICPACQHAARCDPETGACLCLPGFVG 705
Query: 460 TTCQ 471
+ CQ
Sbjct: 706 SRCQ 709
Score = 58.2 bits (139), Expect = 6e-09
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = +1
Query: 325 SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
SG C+ C G++GP+C+L C C GA C P G C C G+ G TC+
Sbjct: 1144 SGATCNLDCRRGQFGPSCTLHCDCGGGADCDPVSGQCHCVDGYMGPTCR 1192
Score = 57.4 bits (137), Expect = 1e-08
Identities = 25/62 (40%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
CH + C +G C+ C GR+GP C C C NG SC G C C GF GT
Sbjct: 949 CHHVTGACRCPPGFTGSGCEQGCPPGRYGPGCEQLCGCLNGGSCDAATGACRCPTGFLGT 1008
Query: 463 TC 468
C
Sbjct: 1009 DC 1010
Score = 56.6 bits (135), Expect = 2e-08
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = +1
Query: 292 NCHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNG-ASCSPDDGICECAPGFR 456
+CH A+ C + G C C G WGP+CS PC C G SC G+C C G+
Sbjct: 732 HCHPATGHCSCAPGWTGFSCQRACDTGHWGPDCSHPCNCSAGHGSCDAISGLCLCEAGYV 791
Query: 457 GTTCQR 474
G C++
Sbjct: 792 GPRCEQ 797
Score = 55.8 bits (133), Expect = 3e-08
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +1
Query: 325 SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
+G+ C+ C +G NCS C C+NG +C G C C PG GT C+
Sbjct: 442 TGLICNETCPPDTFGKNCSFSCSCQNGGTCDSVTGACRCPPGVSGTNCE 490
Score = 51.2 bits (121), Expect = 7e-07
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 286 LTNCHSASPLCLV--SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRG 459
L + H+ LC +G C S C G +G C+ C C GA+C G C C PGF G
Sbjct: 905 LCDPHTGRCLCPAGWTGDKCQSPCLRGWFGEACAQRCSCPPGAACHHVTGACRCPPGFTG 964
Query: 460 TTCQR 474
+ C++
Sbjct: 965 SGCEQ 969
Score = 50.8 bits (120), Expect = 9e-07
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
C + CL +GV C+ C + R+G C C C+NG C +G C C G+ G
Sbjct: 1035 CDPVTGTCLCPPGRAGVRCERGCPQNRFGVGCEHTCSCRNGGLCHASNGSCSCGLGWTGR 1094
Query: 463 TCQ 471
C+
Sbjct: 1095 HCE 1097
Score = 48.5 bits (114), Expect = 4e-06
Identities = 25/65 (38%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYC--KNGASCSPDDGICECAPGFR 456
CH CL G C C +GP CS C C + SC DG C C GFR
Sbjct: 514 CHRLYGACLCDPGLYGRFCHLTCPPWAFGPGCSEECQCVQPHTQSCDKRDGSCSCKAGFR 573
Query: 457 GTTCQ 471
G CQ
Sbjct: 574 GERCQ 578
Score = 46.6 bits (109), Expect = 2e-05
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +1
Query: 295 CHSASPLCL----VSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
C S + C VSG +C+ C +G +G +C C C N C G C C PG G
Sbjct: 471 CDSVTGACRCPPGVSGTNCEDGCPKGYYGKHCRKKCNCANRGRCHRLYGACLCDPGLYGR 530
Query: 463 TC 468
C
Sbjct: 531 FC 532
Score = 46.6 bits (109), Expect = 2e-05
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRSKCLFR 492
G C+ C G +G +C C C GA+C +G C C G RG C KCL R
Sbjct: 835 GTFCEHACPAGFFGLDCRSACNCTAGAACDAVNGSCLCPAGRRGPRC-AEKCLPR 888
Score = 44.3 bits (103), Expect = 8e-05
Identities = 29/83 (34%), Positives = 34/83 (40%), Gaps = 18/83 (21%)
Frame = +1
Query: 292 NCHSASPLCLVSGVHCDSV-----CAEGRWGPNCSLPCY-------------CKNGASCS 417
+C SA +G CD+V C GR GP C+ C C NG C
Sbjct: 850 DCRSACNC--TAGAACDAVNGSCLCPAGRRGPRCAEKCLPRDVRAGCRHSGGCLNGGLCD 907
Query: 418 PDDGICECAPGFRGTTCQRSKCL 486
P G C C G+ G CQ S CL
Sbjct: 908 PHTGRCLCPAGWTGDKCQ-SPCL 929
Score = 43.1 bits (100), Expect = 2e-04
Identities = 20/48 (41%), Positives = 22/48 (45%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
G C C G +G NCS C C GA C G C C PG G C+
Sbjct: 619 GEDCGQECPVGTFGVNCSSSCSC-GGAPCHGVTGQCRCPPGRTGEDCE 665
Score = 40.8 bits (94), Expect = 0.001
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGIC--ECAPGFRGTTC 468
G C + C G +GP C C C G +C G C C GF+G C
Sbjct: 574 GERCQAECELGYFGPGCWQACTCPVGVACDSVSGECGKRCPAGFQGEDC 622
Score = 37.0 bits (84), Expect = 0.013
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 346 VCAEGRWGPNCSLPCY-CKNGASCSPDDGICECAPGFRGTTCQRS 477
VC + +G +CSL C C+NG +C C+C G+ G C +
Sbjct: 405 VCLDDSFGHDCSLTCDDCRNGGTCLLGLDGCDCPEGWTGLICNET 449
>gi|4557869|ref|NP_000450.1| TEK tyrosine kinase, endothelial [Homo
sapiens]
Length = 1124
Score = 53.9 bits (128), Expect = 1e-07
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
G+ C+ C G +GP+C L C C NG C G C C+PG++G C+R
Sbjct: 295 GLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQG-CLCSPGWQGLQCER 342
Score = 48.1 bits (113), Expect = 6e-06
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 349 CAEGRWGPNCSLPCY-CKNGASCSPDDGICECAPGFRGTTCQRS 477
C +WGP C+ C C N C D G C C PGF G TC+++
Sbjct: 211 CEAQKWGPECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKA 254
Score = 37.7 bits (86), Expect = 0.008
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 8/69 (11%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCY----CKNGASCSPDDGICECAPG 450
CH + C+ G C+ C +G C C CK+ C PD C CA G
Sbjct: 233 CHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATG 292
Query: 451 FRGTTCQRS 477
++G C +
Sbjct: 293 WKGLQCNEA 301
>gi|4885631|ref|NP_005415.1| tyrosine kinase with immunoglobulin and
epidermal growth factor homology domains; Tyrosine
kinase with immunoglobulin and epidermal growth factor
[Homo sapiens]
Length = 1138
Score = 53.5 bits (127), Expect = 1e-07
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 349 CAEGRWGPNCSLPCY-CKNGASCSPDDGICECAPGFRGTTCQRS 477
C GRWGP C+ C C +G C DG C C PGF GT C+++
Sbjct: 215 CGAGRWGPGCTKECPGCLHGGVCHDHDGECVCPPGFTGTRCEQA 258
Score = 51.6 bits (122), Expect = 5e-07
Identities = 25/71 (35%), Positives = 33/71 (46%)
Frame = +1
Query: 265 LAFQMPTLTNCHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECA 444
L F +P C S G C CA G +G +C L C C+NG +C G C C
Sbjct: 281 LTFCLPDPYGCSCGSGW---RGSQCQEACAPGHFGADCRLQCQCQNGGTCDRFSG-CVCP 336
Query: 445 PGFRGTTCQRS 477
G+ G C++S
Sbjct: 337 SGWHGVHCEKS 347
Score = 49.3 bits (116), Expect = 3e-06
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCY----CKNGASCSPDDGICECAPG 450
CH C+ +G C+ C EGR+G +C C C+ C PD C C G
Sbjct: 237 CHDHDGECVCPPGFTGTRCEQACREGRFGQSCQEQCPGISGCRGLTFCLPDPYGCSCGSG 296
Query: 451 FRGTTCQRS 477
+RG+ CQ +
Sbjct: 297 WRGSQCQEA 305
>gi|33598933|ref|NP_663326.1| scavenger receptor class F, member 1
isoform 4 precursor; acetyl LDL receptor; scavenger
receptor expressed by endothelial cells [Homo sapiens]
Length = 337
Score = 52.4 bits (124), Expect = 3e-07
Identities = 26/68 (38%), Positives = 35/68 (51%)
Frame = +1
Query: 295 CHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
C++A+ C + C VC G WG CS C C +G+ C D G C C PG+ G CQ+
Sbjct: 165 CNTAAARCEQATGAC--VCKPGWWGRRCSFRCNC-HGSPCEQDSGRCACRPGWWGPECQQ 221
Query: 475 SKCLFRGQ 498
RG+
Sbjct: 222 QCECVRGR 229
Score = 52.0 bits (123), Expect = 4e-07
Identities = 25/60 (41%), Positives = 27/60 (45%)
Frame = +1
Query: 292 NCHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
NCH + C C C G WGP C C C G CS G C C PGFRG C+
Sbjct: 195 NCHGSP--CEQDSGRC--ACRPGWWGPECQQQCECVRGR-CSAASGECTCPPGFRGARCE 249
Score = 52.0 bits (123), Expect = 4e-07
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +1
Query: 349 CAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
C RWG C PC C C P G+C C PG+ +TC+R
Sbjct: 120 CQADRWGARCEFPCACGPHGRCDPATGVCHCEPGWWSSTCRR 161
Score = 51.6 bits (122), Expect = 5e-07
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPC-YCKNGASCSPDDGICE-CAPGFR 456
C +AS C G C+ C G G C+ C CK+ CSPD G CE C PG+
Sbjct: 230 CSAASGECTCPPGFRGARCELPCPAGSHGVQCAHSCGRCKHNEPCSPDTGSCESCEPGWN 289
Query: 457 GTTCQR 474
GT CQ+
Sbjct: 290 GTQCQQ 295
Score = 47.0 bits (110), Expect = 1e-05
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
G HC S C WGP+C C C C P G C+C G C+
Sbjct: 83 GAHCSSRCPGQYWGPDCRESCPCHPHGQCEPATGACQCQADRWGARCE 130
Score = 46.6 bits (109), Expect = 2e-05
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 280 PTLTNCHSASPLCLVSGVHCDSVCAEGRWGPNCSLPC-YCKNGASCSPDDGICE-CAPGF 453
P +C S P +G C C G +G +C C +C++G +C PD G C+ C PG+
Sbjct: 276 PDTGSCESCEPGW--NGTQCQQPCLPGTFGESCEQQCPHCRHGEACEPDTGHCQRCDPGW 333
Query: 454 RG 459
G
Sbjct: 334 LG 335
Score = 40.4 bits (93), Expect = 0.001
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = +1
Query: 349 CAEGRWGPNCSLPCYCKNGAS-CSPDDGICECAPGFRGTTCQ-RSKC 483
C G W C PC C A+ C G C C PG+ G C R C
Sbjct: 150 CEPGWWSSTCRRPCQCNTAAARCEQATGACVCKPGWWGRRCSFRCNC 196
Score = 34.3 bits (77), Expect = 0.087
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Frame = +1
Query: 313 LCLVSGVHCDSVCAEGRW---GPNCSLPCYCKNGASCSPDD-----GICECAPGFRGTTC 468
+C+ S + C G W C++P C+ +C D+ G+C C PGF G C
Sbjct: 29 VCVASSPSAELQCCAG-WRQKDQECTIPI-CEGPDACQKDEVCVKPGLCRCKPGFFGAHC 86
Query: 469 QRSKC 483
S+C
Sbjct: 87 S-SRC 90
>gi|33598935|ref|NP_663327.1| scavenger receptor class F, member 1
isoform 5 precursor; acetyl LDL receptor; scavenger
receptor expressed by endothelial cells [Homo sapiens]
Length = 744
Score = 52.4 bits (124), Expect = 3e-07
Identities = 26/68 (38%), Positives = 35/68 (51%)
Frame = +1
Query: 295 CHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
C++A+ C + C VC G WG CS C C +G+ C D G C C PG+ G CQ+
Sbjct: 165 CNTAAARCEQATGAC--VCKPGWWGRRCSFRCNC-HGSPCEQDSGRCACRPGWWGPECQQ 221
Query: 475 SKCLFRGQ 498
RG+
Sbjct: 222 QCECVRGR 229
Score = 52.0 bits (123), Expect = 4e-07
Identities = 25/60 (41%), Positives = 27/60 (45%)
Frame = +1
Query: 292 NCHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
NCH + C C C G WGP C C C G CS G C C PGFRG C+
Sbjct: 195 NCHGSP--CEQDSGRC--ACRPGWWGPECQQQCECVRGR-CSAASGECTCPPGFRGARCE 249
Score = 52.0 bits (123), Expect = 4e-07
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +1
Query: 349 CAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
C RWG C PC C C P G+C C PG+ +TC+R
Sbjct: 120 CQADRWGARCEFPCACGPHGRCDPATGVCHCEPGWWSSTCRR 161
Score = 51.6 bits (122), Expect = 5e-07
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPC-YCKNGASCSPDDGICE-CAPGFR 456
C +AS C G C+ C G G C+ C CK+ CSPD G CE C PG+
Sbjct: 230 CSAASGECTCPPGFRGARCELPCPAGSHGVQCAHSCGRCKHNEPCSPDTGSCESCEPGWN 289
Query: 457 GTTCQR 474
GT CQ+
Sbjct: 290 GTQCQQ 295
Score = 47.0 bits (110), Expect = 1e-05
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
G HC S C WGP+C C C C P G C+C G C+
Sbjct: 83 GAHCSSRCPGQYWGPDCRESCPCHPHGQCEPATGACQCQADRWGARCE 130
Score = 45.1 bits (105), Expect = 5e-05
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 280 PTLTNCHSASPLCLVSGVHCDSVCAEGRWGPNCSLPC-YCKNGASCSPDDGICECAPGFR 456
P +C S P +G C C G +G +C C +C++G +C PD G C+ G R
Sbjct: 276 PDTGSCESCEPGW--NGTQCQQPCLPGTFGESCEQQCPHCRHGEACEPDTGHCQPGSGSR 333
Query: 457 GT 462
T
Sbjct: 334 DT 335
Score = 40.4 bits (93), Expect = 0.001
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = +1
Query: 349 CAEGRWGPNCSLPCYCKNGAS-CSPDDGICECAPGFRGTTCQ-RSKC 483
C G W C PC C A+ C G C C PG+ G C R C
Sbjct: 150 CEPGWWSSTCRRPCQCNTAAARCEQATGACVCKPGWWGRRCSFRCNC 196
Score = 34.3 bits (77), Expect = 0.087
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Frame = +1
Query: 313 LCLVSGVHCDSVCAEGRW---GPNCSLPCYCKNGASCSPDD-----GICECAPGFRGTTC 468
+C+ S + C G W C++P C+ +C D+ G+C C PGF G C
Sbjct: 29 VCVASSPSAELQCCAG-WRQKDQECTIPI-CEGPDACQKDEVCVKPGLCRCKPGFFGAHC 86
Query: 469 QRSKC 483
S+C
Sbjct: 87 S-SRC 90
>gi|33598927|ref|NP_663324.1| scavenger receptor class F, member 1
isoform 2 precursor; acetyl LDL receptor; scavenger
receptor expressed by endothelial cells [Homo sapiens]
Length = 342
Score = 52.4 bits (124), Expect = 3e-07
Identities = 26/68 (38%), Positives = 35/68 (51%)
Frame = +1
Query: 295 CHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
C++A+ C + C VC G WG CS C C +G+ C D G C C PG+ G CQ+
Sbjct: 165 CNTAAARCEQATGAC--VCKPGWWGRRCSFRCNC-HGSPCEQDSGRCACRPGWWGPECQQ 221
Query: 475 SKCLFRGQ 498
RG+
Sbjct: 222 QCECVRGR 229
Score = 52.0 bits (123), Expect = 4e-07
Identities = 25/60 (41%), Positives = 27/60 (45%)
Frame = +1
Query: 292 NCHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
NCH + C C C G WGP C C C G CS G C C PGFRG C+
Sbjct: 195 NCHGSP--CEQDSGRC--ACRPGWWGPECQQQCECVRGR-CSAASGECTCPPGFRGARCE 249
Score = 52.0 bits (123), Expect = 4e-07
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +1
Query: 349 CAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
C RWG C PC C C P G+C C PG+ +TC+R
Sbjct: 120 CQADRWGARCEFPCACGPHGRCDPATGVCHCEPGWWSSTCRR 161
Score = 51.6 bits (122), Expect = 5e-07
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPC-YCKNGASCSPDDGICE-CAPGFR 456
C +AS C G C+ C G G C+ C CK+ CSPD G CE C PG+
Sbjct: 230 CSAASGECTCPPGFRGARCELPCPAGSHGVQCAHSCGRCKHNEPCSPDTGSCESCEPGWN 289
Query: 457 GTTCQR 474
GT CQ+
Sbjct: 290 GTQCQQ 295
Score = 47.0 bits (110), Expect = 1e-05
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
G HC S C WGP+C C C C P G C+C G C+
Sbjct: 83 GAHCSSRCPGQYWGPDCRESCPCHPHGQCEPATGACQCQADRWGARCE 130
Score = 46.6 bits (109), Expect = 2e-05
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 280 PTLTNCHSASPLCLVSGVHCDSVCAEGRWGPNCSLPC-YCKNGASCSPDDGICE-CAPGF 453
P +C S P +G C C G +G +C C +C++G +C PD G C+ C PG+
Sbjct: 276 PDTGSCESCEPGW--NGTQCQQPCLPGTFGESCEQQCPHCRHGEACEPDTGHCQRCDPGW 333
Query: 454 RG 459
G
Sbjct: 334 LG 335
Score = 40.4 bits (93), Expect = 0.001
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = +1
Query: 349 CAEGRWGPNCSLPCYCKNGAS-CSPDDGICECAPGFRGTTCQ-RSKC 483
C G W C PC C A+ C G C C PG+ G C R C
Sbjct: 150 CEPGWWSSTCRRPCQCNTAAARCEQATGACVCKPGWWGRRCSFRCNC 196
Score = 34.3 bits (77), Expect = 0.087
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Frame = +1
Query: 313 LCLVSGVHCDSVCAEGRW---GPNCSLPCYCKNGASCSPDD-----GICECAPGFRGTTC 468
+C+ S + C G W C++P C+ +C D+ G+C C PGF G C
Sbjct: 29 VCVASSPSAELQCCAG-WRQKDQECTIPI-CEGPDACQKDEVCVKPGLCRCKPGFFGAHC 86
Query: 469 QRSKC 483
S+C
Sbjct: 87 S-SRC 90
>gi|33598929|ref|NP_003684.2| scavenger receptor class F, member 1
isoform 1 precursor; acetyl LDL receptor; scavenger
receptor expressed by endothelial cells [Homo sapiens]
Length = 830
Score = 52.4 bits (124), Expect = 3e-07
Identities = 26/68 (38%), Positives = 35/68 (51%)
Frame = +1
Query: 295 CHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
C++A+ C + C VC G WG CS C C +G+ C D G C C PG+ G CQ+
Sbjct: 165 CNTAAARCEQATGAC--VCKPGWWGRRCSFRCNC-HGSPCEQDSGRCACRPGWWGPECQQ 221
Query: 475 SKCLFRGQ 498
RG+
Sbjct: 222 QCECVRGR 229
Score = 52.0 bits (123), Expect = 4e-07
Identities = 25/60 (41%), Positives = 27/60 (45%)
Frame = +1
Query: 292 NCHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
NCH + C C C G WGP C C C G CS G C C PGFRG C+
Sbjct: 195 NCHGSP--CEQDSGRC--ACRPGWWGPECQQQCECVRGR-CSAASGECTCPPGFRGARCE 249
Score = 52.0 bits (123), Expect = 4e-07
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +1
Query: 349 CAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
C RWG C PC C C P G+C C PG+ +TC+R
Sbjct: 120 CQADRWGARCEFPCACGPHGRCDPATGVCHCEPGWWSSTCRR 161
Score = 51.6 bits (122), Expect = 5e-07
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPC-YCKNGASCSPDDGICE-CAPGFR 456
C +AS C G C+ C G G C+ C CK+ CSPD G CE C PG+
Sbjct: 230 CSAASGECTCPPGFRGARCELPCPAGSHGVQCAHSCGRCKHNEPCSPDTGSCESCEPGWN 289
Query: 457 GTTCQR 474
GT CQ+
Sbjct: 290 GTQCQQ 295
Score = 50.1 bits (118), Expect = 2e-06
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 280 PTLTNCHSASPLCLVSGVHCDSVCAEGRWGPNCSLPC-YCKNGASCSPDDGICE-CAPGF 453
P +C S P +G C C G +G +C C +C++G +C PD G C+ C PG+
Sbjct: 276 PDTGSCESCEPGW--NGTQCQQPCLPGTFGESCEQQCPHCRHGEACEPDTGHCQRCDPGW 333
Query: 454 RGTTCQ 471
G C+
Sbjct: 334 LGPRCE 339
Score = 47.0 bits (110), Expect = 1e-05
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
G HC S C WGP+C C C C P G C+C G C+
Sbjct: 83 GAHCSSRCPGQYWGPDCRESCPCHPHGQCEPATGACQCQADRWGARCE 130
Score = 44.3 bits (103), Expect = 8e-05
Identities = 26/73 (35%), Positives = 31/73 (42%), Gaps = 16/73 (21%)
Frame = +1
Query: 292 NCHSASPLCLVSG---VHCDSVCAEGRWGP-------------NCSLPCYCKNGASCSPD 423
+C S P C+ V D VC+ G WGP NCS+PC C G C P
Sbjct: 350 DCGSTCPTCVQGSCDTVTGDCVCSAGYWGPSCNASCPAGFHGNNCSVPCECPEGL-CHPV 408
Query: 424 DGICECAPGFRGT 462
G C+ G R T
Sbjct: 409 SGSCQPGSGSRDT 421
Score = 40.4 bits (93), Expect = 0.001
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = +1
Query: 349 CAEGRWGPNCSLPCYCKNGAS-CSPDDGICECAPGFRGTTCQ-RSKC 483
C G W C PC C A+ C G C C PG+ G C R C
Sbjct: 150 CEPGWWSSTCRRPCQCNTAAARCEQATGACVCKPGWWGRRCSFRCNC 196
Score = 39.3 bits (90), Expect = 0.003
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +1
Query: 280 PTLTNCHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRG 459
P +C P L G C+ C G +G +C C SC G C C+ G+ G
Sbjct: 321 PDTGHCQRCDPGWL--GPRCEDPCPTGTFGEDCGSTCPTCVQGSCDTVTGDCVCSAGYWG 378
Query: 460 TTCQRS 477
+C S
Sbjct: 379 PSCNAS 384
Score = 34.3 bits (77), Expect = 0.087
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Frame = +1
Query: 313 LCLVSGVHCDSVCAEGRW---GPNCSLPCYCKNGASCSPDD-----GICECAPGFRGTTC 468
+C+ S + C G W C++P C+ +C D+ G+C C PGF G C
Sbjct: 29 VCVASSPSAELQCCAG-WRQKDQECTIPI-CEGPDACQKDEVCVKPGLCRCKPGFFGAHC 86
Query: 469 QRSKC 483
S+C
Sbjct: 87 S-SRC 90
Database: RefSeq (Homo Sapiens/Amino Acid)
Posted date: Apr 12, 2004 5:34 AM
Number of letters in database: 13,743,509
Number of sequences in database: 27,437
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 13,743,509
effective HSP length: 98
effective length of database: 11,054,683
effective search space used: 1613983718
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeq (Mouse) database
Query= 20040204S-018717 (20040204S-018717) 20040204S-018717
(736 letters)
Database: RefSeq (Mus Musculus/Amino Acid)
26,199 sequences; 11,906,519 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|38083894|ref|XP_140362.3| similar to MEGF10 protein [Mus musc... 118 3e-27
Alignment gi|27369722|ref|NP_766110.1| RIKEN cDNA 2410080H04 [Mus musculus] 93 2e-19
Alignment gi|33239429|ref|NP_690012.1| Jedi soluble isoform 736; Jedi [Mus... 71 7e-13
Alignment gi|22779881|ref|NP_082736.1| Jedi [Mus musculus] 71 7e-13
Alignment gi|26986573|ref|NP_758477.1| EGF-like-domain, multiple 3 [Mus mu... 64 7e-11
Alignment gi|38083892|ref|XP_355093.1| similar to MEGF10 protein [Mus musc... 64 1e-10
Alignment gi|38079068|ref|XP_149548.3| similar to MEGF6 [Mus musculus] 63 1e-10
Alignment gi|38092186|ref|XP_358747.1| similar to Endothelial cells scaven... 56 2e-08
Alignment gi|38091484|ref|XP_354628.1| similar to Endothelial cells scaven... 56 2e-08
Alignment gi|8567412|ref|NP_038718.1| endothelial-specific receptor tyrosi... 56 2e-08
>gi|38083894|ref|XP_140362.3| similar to MEGF10 protein [Mus
musculus]
Length = 693
Score = 118 bits (296), Expect = 3e-27
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +1
Query: 331 VHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
VHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR
Sbjct: 90 VHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 137
Score = 59.7 bits (143), Expect = 2e-09
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
CH + LC +G C+ VC GR+G NC+ C C N +C+P D C+C PG+ G+
Sbjct: 186 CHHITGLCDCLPGFTGALCNEVCPSGRFGKNCAGVCTCTNNGTCNPIDRSCQCYPGWIGS 245
Query: 463 TCQR 474
C +
Sbjct: 246 DCSQ 249
Score = 59.7 bits (143), Expect = 2e-09
Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTC-QRSKCLFRGQ 498
G C C WGPNC C C NGA CS DG C+C PG+ G C QR F G+
Sbjct: 244 GSDCSQPCPPAHWGPNCIHTCNCHNGAFCSAYDGECKCTPGWTGLYCTQRCPLGFYGK 301
Score = 50.8 bits (120), Expect = 8e-07
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRSKCLFRG 495
G HC+ C G +G C C C N ++C G C C+PG++G C ++ + G
Sbjct: 329 GRHCEQKCPAGTYGYGCRQICDCLNNSTCDHITGTCYCSPGWKGARCDQAGVIIVG 384
Score = 42.7 bits (99), Expect = 2e-04
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +1
Query: 325 SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRSKC 483
+G++C C G +G +C+L C C+NG C G PGF G C++ KC
Sbjct: 286 TGLYCTQRCPLGFYGKDCALICQCQNGGDCDHISGQVP-PPGFMGRHCEQ-KC 336
Score = 38.1 bits (87), Expect = 0.005
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 343 SVCAEGRWGPNCSLPC-YCKNGAS-CSPDDGICECAPGFRGTTC 468
+VC+ G +G CS C C + + C G+C+C PGF G C
Sbjct: 161 AVCSPGFYGHRCSQTCPQCVHSSGPCHHITGLCDCLPGFTGALC 204
>gi|27369722|ref|NP_766110.1| RIKEN cDNA 2410080H04 [Mus musculus]
Length = 947
Score = 92.8 bits (229), Expect = 2e-19
Identities = 35/50 (70%), Positives = 40/50 (80%)
Frame = +1
Query: 325 SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
+G+ CDS C GRWGPNCS+ C C+NG SCSP+DG CECAPGFRG CQR
Sbjct: 526 TGIRCDSTCPPGRWGPNCSVSCSCENGGSCSPEDGSCECAPGFRGPLCQR 575
Score = 64.7 bits (156), Expect = 5e-11
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
G+ C C G WG NC+ C C NGA+CSP DG C C PG+ G +C+
Sbjct: 441 GLDCSLPCPSGTWGLNCNETCICANGAACSPFDGSCACTPGWLGDSCE 488
Score = 63.9 bits (154), Expect = 9e-11
Identities = 27/63 (42%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 292 NCHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRG 459
+CH + C SG +C+ C G +G C LPC C+NGA C G C CAPGF G
Sbjct: 339 SCHPVTGACTCQPGWSGHYCNESCPAGYYGNGCQLPCTCQNGADCHSITGSCTCAPGFMG 398
Query: 460 TTC 468
C
Sbjct: 399 EVC 401
Score = 63.9 bits (154), Expect = 9e-11
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +1
Query: 292 NCHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRG 459
+CHS + C + G C CA G +GPNCS C C NG +CSP DG C C G++G
Sbjct: 382 DCHSITGSCTCAPGFMGEVCAVPCAAGTYGPNCSSVCSCSNGGTCSPVDGSCTCREGWQG 441
Query: 460 TTC 468
C
Sbjct: 442 LDC 444
Score = 62.8 bits (151), Expect = 2e-10
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
CH S +C SG C+ VCA G +G +C+ C C N +CSP DG C+C PG+ G
Sbjct: 600 CHHISGICECLPGFSGALCNQVCAGGHFGQDCAQLCSCANNGTCSPIDGSCQCFPGWIGK 659
Query: 463 TCQR 474
C +
Sbjct: 660 DCSQ 663
Score = 62.4 bits (150), Expect = 3e-10
Identities = 36/94 (38%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +1
Query: 208 PCPLLPGV-SQF*DHDLVSHLAFQMPTLTN-CHSASPLCLVSGVHCDSVCAEGRWGPNCS 381
PCP PG Q D H Q +T CH + G C C G +G CS
Sbjct: 229 PCP--PGTFGQNCSQDCPCHHGGQCDHVTGQCHCTAGYM---GDRCQEECPFGTFGFLCS 283
Query: 382 LPCYCKNGASCSPDDGICECAPGFRGTTCQRSKC 483
C C NG CSP G CEC PG++G +CQ C
Sbjct: 284 QRCDCHNGGQCSPATGACECEPGYKGPSCQERLC 317
Score = 60.8 bits (146), Expect = 7e-10
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +1
Query: 349 CAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
C WGP+CS C C+NGA C+P G C CAPGFRG C+
Sbjct: 101 CDSEHWGPHCSNRCQCQNGALCNPITGACVCAPGFRGWRCE 141
Score = 59.3 bits (142), Expect = 2e-09
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
C+ + C+ + G C+ +CA G G C L C C +GASC P G C CAPG+ G
Sbjct: 122 CNPITGACVCAPGFRGWRCEELCAPGTHGKGCQLLCQCHHGASCDPRTGECLCAPGYTGV 181
Query: 463 TCQ 471
C+
Sbjct: 182 YCE 184
Score = 56.6 bits (135), Expect = 1e-08
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1
Query: 325 SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRS 477
SG HC+ CA G +G C C C N A+C G C C+PGF+G C ++
Sbjct: 700 SGRHCEQRCAPGTFGYGCQQLCECMNNATCDHVTGTCYCSPGFKGIRCDQA 750
Score = 54.7 bits (130), Expect = 5e-08
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1
Query: 325 SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTC 468
+GV+C+ +C G G +C L C C+NG +C G C C PG+ G C
Sbjct: 179 TGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVC 226
Score = 51.2 bits (121), Expect = 6e-07
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 340 DSVCAEGRWGPNCSLPCYC--KNGASCSPDDGICECAPGFRGTTCQRS 477
+ +C EG GP C+LPC C +N SC P G C C PG+ G C S
Sbjct: 314 ERLCPEGLHGPGCTLPCPCDTENTISCHPVTGACTCQPGWSGHYCNES 361
Score = 49.7 bits (117), Expect = 2e-06
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
CH + C +G C C G +G NCS C C +G C G C C G+ G
Sbjct: 208 CHHITGECACPPGWTGAVCAQPCPPGTFGQNCSQDCPCHHGGQCDHVTGQCHCTAGYMGD 267
Query: 463 TCQRSKCLF 489
CQ +C F
Sbjct: 268 RCQ-EECPF 275
Score = 46.6 bits (109), Expect = 1e-05
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
G C C +G +C C C+NGASC G C C GF G C++
Sbjct: 658 GKDCSQGCPSAFFGKDCGHICQCQNGASCDHITGKCTCRTGFSGRHCEQ 706
>gi|33239429|ref|NP_690012.1| Jedi soluble isoform 736; Jedi [Mus
musculus]
Length = 747
Score = 70.9 bits (172), Expect = 7e-13
Identities = 28/49 (57%), Positives = 32/49 (65%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
G C C EG WG NCS C CKNG +C ++G C CAPGFRG +CQR
Sbjct: 558 GTRCHLPCPEGFWGANCSNTCTCKNGGTCVSENGNCVCAPGFRGPSCQR 606
Score = 60.8 bits (146), Expect = 7e-10
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +1
Query: 289 TNCHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFR 456
++CH + C +G C C G WG CS C C +G +C P DG C C PG+
Sbjct: 627 SSCHPSDGTCSCLAGWTGPDCSEACPPGHWGLKCSQLCQCHHGGTCHPQDGSCICTPGWT 686
Query: 457 GTTC 468
G C
Sbjct: 687 GPNC 690
Score = 57.4 bits (137), Expect = 8e-09
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +1
Query: 292 NCHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRG 459
+CH C +G+HC+ C + GP C C C +G C D G+C CAPG+ G
Sbjct: 370 SCHPMHGECSCQPGWAGLHCNESCPQDTHGPGCQEHCLCLHGGLCLADSGLCRCAPGYTG 429
Query: 460 TTC 468
C
Sbjct: 430 PHC 432
Score = 57.0 bits (136), Expect = 1e-08
Identities = 24/48 (50%), Positives = 26/48 (54%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
GV C C EG GPNC+ C C NG C G C CAPG+ G CQ
Sbjct: 254 GVICSLPCPEGFHGPNCTQECRCHNGGLCDRFTGQCHCAPGYIGDRCQ 301
Score = 55.5 bits (132), Expect = 3e-08
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTC 468
G C S CA G WGP C C+C N +SC P G C C G + C
Sbjct: 126 GGDCSSECAPGMWGPQCDKFCHCGNNSSCDPKSGACFCPSGLQPPNC 172
Score = 54.7 bits (130), Expect = 5e-08
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +1
Query: 334 HCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
+C C G WG NC+ C C + CSP G C C PG+ G CQ
Sbjct: 474 NCSVPCPLGTWGFNCNASCQCAHDGVCSPQTGACTCTPGWHGAHCQ 519
Score = 53.1 bits (126), Expect = 2e-07
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
C + S LC + G HC ++C +G NCS C C+N +CSP DG C C G++
Sbjct: 414 CLADSGLCRCAPGYTGPHCANLCPPDTYGINCSSRCSCENAIACSPIDGTCICKEGWQRG 473
Query: 463 TC 468
C
Sbjct: 474 NC 475
Score = 51.6 bits (122), Expect = 4e-07
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +1
Query: 289 TNCHSASPLCLV-SGV---HCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFR 456
++C S C SG+ +C C G +GP C C C GASC P DG C C PG
Sbjct: 152 SSCDPKSGACFCPSGLQPPNCLQPCPAGHYGPACQFDCQC-YGASCDPQDGACFCPPGRA 210
Query: 457 GTTC 468
G +C
Sbjct: 211 GPSC 214
Score = 51.2 bits (121), Expect = 6e-07
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +1
Query: 295 CHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
CH A G C C GR+G +C+ C C GA C P +G C C GF G C
Sbjct: 289 CHCAPGYI---GDRCQEECPVGRFGQDCAETCDCAPGARCFPANGACLCEHGFTGDRCTE 345
Query: 475 SKC 483
C
Sbjct: 346 RLC 348
Score = 49.7 bits (117), Expect = 2e-06
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHC-DSVCAEGRWGPNCSLPCYC--KNGASCSPDDGICECAPGF 453
C A+ CL +G C + +C +GR+G +C PC C ++ SC P G C C PG+
Sbjct: 325 CFPANGACLCEHGFTGDRCTERLCPDGRYGLSCQEPCTCDPEHSLSCHPMHGECSCQPGW 384
Query: 454 RGTTCQRS 477
G C S
Sbjct: 385 AGLHCNES 392
Score = 48.5 bits (114), Expect = 4e-06
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
CH C+ + G +C C +G NCS C C G C P G C C PG G
Sbjct: 672 CHPQDGSCICTPGWTGPNCLEGCPPRMFGVNCSQLCQCDLGEMCHPQTGACVCPPGHSGA 731
Query: 463 TCQ 471
C+
Sbjct: 732 DCK 734
Score = 46.2 bits (108), Expect = 2e-05
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNG-ASCSPDDGICECAPGFRGTTCQRS 477
G C C GR+G C + C C N +SC P DG C C G+ G C +
Sbjct: 601 GPSCQRPCPPGRYGKRC-VQCKCNNNHSSCHPSDGTCSCLAGWTGPDCSEA 650
Score = 42.7 bits (99), Expect = 2e-04
Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 18/69 (26%)
Frame = +1
Query: 316 CLVSGVHCDS-----VCAEGRWGPNCSLPCY-------------CKNGASCSPDDGICEC 441
C G CD C GR GP+C++PC C+NG G C C
Sbjct: 189 CQCYGASCDPQDGACFCPPGRAGPSCNVPCSQGTDGFFCPRTYPCQNGGVPQGSQGSCSC 248
Query: 442 APGFRGTTC 468
PG+ G C
Sbjct: 249 PPGWMGVIC 257
Score = 36.2 bits (82), Expect = 0.019
Identities = 24/76 (31%), Positives = 28/76 (36%), Gaps = 17/76 (22%)
Frame = +1
Query: 292 NCHSASPLCLVSGVHCDSV----CAEGRWGPNCSLP-------------CYCKNGASCSP 420
NC+ AS C GV C G G +C LP C C + C P
Sbjct: 487 NCN-ASCQCAHDGVCSPQTGACTCTPGWHGAHCQLPCPKGQFGEGCASVCDCDHSDGCDP 545
Query: 421 DDGICECAPGFRGTTC 468
G C C G+ GT C
Sbjct: 546 VHGQCRCQAGWMGTRC 561
Score = 28.5 bits (62), Expect = 4.1
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +1
Query: 337 CDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
C C GR C P C+ D ECAPG G C +
Sbjct: 103 CAQECVHGR----CVAPNQCQCAPGWRGGDCSSECAPGMWGPQCDK 144
>gi|22779881|ref|NP_082736.1| Jedi [Mus musculus]
Length = 1034
Score = 70.9 bits (172), Expect = 7e-13
Identities = 28/49 (57%), Positives = 32/49 (65%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
G C C EG WG NCS C CKNG +C ++G C CAPGFRG +CQR
Sbjct: 558 GTRCHLPCPEGFWGANCSNTCTCKNGGTCVSENGNCVCAPGFRGPSCQR 606
Score = 60.8 bits (146), Expect = 7e-10
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +1
Query: 289 TNCHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFR 456
++CH + C +G C C G WG CS C C +G +C P DG C C PG+
Sbjct: 627 SSCHPSDGTCSCLAGWTGPDCSEACPPGHWGLKCSQLCQCHHGGTCHPQDGSCICTPGWT 686
Query: 457 GTTC 468
G C
Sbjct: 687 GPNC 690
Score = 57.4 bits (137), Expect = 8e-09
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +1
Query: 292 NCHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRG 459
+CH C +G+HC+ C + GP C C C +G C D G+C CAPG+ G
Sbjct: 370 SCHPMHGECSCQPGWAGLHCNESCPQDTHGPGCQEHCLCLHGGLCLADSGLCRCAPGYTG 429
Query: 460 TTC 468
C
Sbjct: 430 PHC 432
Score = 57.0 bits (136), Expect = 1e-08
Identities = 24/48 (50%), Positives = 26/48 (54%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
GV C C EG GPNC+ C C NG C G C CAPG+ G CQ
Sbjct: 254 GVICSLPCPEGFHGPNCTQECRCHNGGLCDRFTGQCHCAPGYIGDRCQ 301
Score = 55.5 bits (132), Expect = 3e-08
Identities = 21/47 (44%), Positives = 24/47 (51%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTC 468
G C S CA G WGP C C+C N +SC P G C C G + C
Sbjct: 126 GGDCSSECAPGMWGPQCDKFCHCGNNSSCDPKSGTCFCPSGLQPPNC 172
Score = 54.7 bits (130), Expect = 5e-08
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +1
Query: 334 HCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
+C C G WG NC+ C C + CSP G C C PG+ G CQ
Sbjct: 474 NCSVPCPLGTWGFNCNASCQCAHDGVCSPQTGACTCTPGWHGAHCQ 519
Score = 53.1 bits (126), Expect = 2e-07
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
C + S LC + G HC ++C +G NCS C C+N +CSP DG C C G++
Sbjct: 414 CLADSGLCRCAPGYTGPHCANLCPPDTYGINCSSRCSCENAIACSPIDGTCICKEGWQRG 473
Query: 463 TC 468
C
Sbjct: 474 NC 475
Score = 51.6 bits (122), Expect = 4e-07
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +1
Query: 289 TNCHSASPLCLV-SGV---HCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFR 456
++C S C SG+ +C C G +GP C C C GASC P DG C C PG
Sbjct: 152 SSCDPKSGTCFCPSGLQPPNCLQPCPAGHYGPACQFDCQC-YGASCDPQDGACFCPPGRA 210
Query: 457 GTTC 468
G +C
Sbjct: 211 GPSC 214
Score = 51.2 bits (121), Expect = 6e-07
Identities = 24/63 (38%), Positives = 28/63 (44%)
Frame = +1
Query: 295 CHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
CH A G C C GR+G +C+ C C GA C P +G C C GF G C
Sbjct: 289 CHCAPGYI---GDRCQEECPVGRFGQDCAETCDCAPGARCFPANGACLCEHGFTGDRCTE 345
Query: 475 SKC 483
C
Sbjct: 346 RLC 348
Score = 49.7 bits (117), Expect = 2e-06
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHC-DSVCAEGRWGPNCSLPCYC--KNGASCSPDDGICECAPGF 453
C A+ CL +G C + +C +GR+G +C PC C ++ SC P G C C PG+
Sbjct: 325 CFPANGACLCEHGFTGDRCTERLCPDGRYGLSCQEPCTCDPEHSLSCHPMHGECSCQPGW 384
Query: 454 RGTTCQRS 477
G C S
Sbjct: 385 AGLHCNES 392
Score = 49.3 bits (116), Expect = 2e-06
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
CH C+ + G +C C +G NCS C C G C P+ G C C PG G
Sbjct: 672 CHPQDGSCICTPGWTGPNCLEGCPPRMFGVNCSQLCQCDLGEMCHPETGACVCPPGHSGA 731
Query: 463 TCQ 471
C+
Sbjct: 732 DCK 734
Score = 46.2 bits (108), Expect = 2e-05
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNG-ASCSPDDGICECAPGFRGTTCQRS 477
G C C GR+G C + C C N +SC P DG C C G+ G C +
Sbjct: 601 GPSCQRPCPPGRYGKRC-VQCKCNNNHSSCHPSDGTCSCLAGWTGPDCSEA 650
Score = 42.7 bits (99), Expect = 2e-04
Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 18/69 (26%)
Frame = +1
Query: 316 CLVSGVHCDS-----VCAEGRWGPNCSLPCY-------------CKNGASCSPDDGICEC 441
C G CD C GR GP+C++PC C+NG G C C
Sbjct: 189 CQCYGASCDPQDGACFCPPGRAGPSCNVPCSQGTDGFFCPRTYPCQNGGVPQGSQGSCSC 248
Query: 442 APGFRGTTC 468
PG+ G C
Sbjct: 249 PPGWMGVIC 257
Score = 36.2 bits (82), Expect = 0.019
Identities = 24/76 (31%), Positives = 28/76 (36%), Gaps = 17/76 (22%)
Frame = +1
Query: 292 NCHSASPLCLVSGVHCDSV----CAEGRWGPNCSLP-------------CYCKNGASCSP 420
NC+ AS C GV C G G +C LP C C + C P
Sbjct: 487 NCN-ASCQCAHDGVCSPQTGACTCTPGWHGAHCQLPCPKGQFGEGCASVCDCDHSDGCDP 545
Query: 421 DDGICECAPGFRGTTC 468
G C C G+ GT C
Sbjct: 546 VHGQCRCQAGWMGTRC 561
Score = 28.5 bits (62), Expect = 4.1
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +1
Query: 337 CDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
C C GR C P C+ D ECAPG G C +
Sbjct: 103 CAQECVHGR----CVAPNQCQCAPGWRGGDCSSECAPGMWGPQCDK 144
>gi|26986573|ref|NP_758477.1| EGF-like-domain, multiple 3 [Mus
musculus]
Length = 546
Score = 64.3 bits (155), Expect = 7e-11
Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
CH+ + C G HC+ C GR+G C L C C+N SC P G C C PGF G
Sbjct: 332 CHATNGSCSCPLGWMGPHCEHACPAGRYGAACLLECSCQNNGSCEPTSGACLCGPGFYGQ 391
Query: 463 TCQ 471
C+
Sbjct: 392 ACE 394
Score = 63.5 bits (153), Expect = 1e-10
Identities = 29/68 (42%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +1
Query: 280 PTLTNCHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAP 447
PT C S LCL +G CD C GR+GP C+L C C GA C P G C C
Sbjct: 456 PTGVPCDPISGLCLCPPGRAGTTCDLDCRRGRFGPGCALRCDCGGGADCDPISGQCHCVD 515
Query: 448 GFRGTTCQ 471
+ G TC+
Sbjct: 516 SYTGPTCR 523
Score = 61.6 bits (148), Expect = 4e-10
Identities = 26/62 (41%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
CH AS C+ + G C C GR+GP C C C NG +C P G C C GF G
Sbjct: 203 CHPASGACVCAAGYHGTDCQQRCPSGRYGPGCEQICKCLNGGTCDPATGACYCPAGFLGA 262
Query: 463 TC 468
C
Sbjct: 263 DC 264
Score = 59.3 bits (142), Expect = 2e-09
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
CH + CL G HC+ C G +G C+ C+C GASC G C C PGF G
Sbjct: 116 CHHVTGACLCPPGWRGSHCEQACPRGWFGEACAQRCHCPPGASCHHVSGECHCPPGFTGP 175
Query: 463 TCQRS 477
C+++
Sbjct: 176 GCEQA 180
Score = 57.4 bits (137), Expect = 8e-09
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
G C C +GR+GP+C+ C C GA+C P G C C PG G C+R
Sbjct: 261 GADCSLACPQGRFGPSCAHVCTCGQGAACDPVSGTCICPPGKTGGHCER 309
Score = 54.3 bits (129), Expect = 7e-08
Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +1
Query: 292 NCHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRG 459
+C S CL G C+ C G G C C C+ GA C P G C C GFRG
Sbjct: 374 SCEPTSGACLCGPGFYGQACEDTCPAGFHGSGCQRVCECQQGAPCDPVSGRCLCPAGFRG 433
Query: 460 TTCQR 474
C+R
Sbjct: 434 QFCER 438
Score = 53.9 bits (128), Expect = 9e-08
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = +1
Query: 280 PTLTNCHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGA-SCSPDDGICECA 444
P +CH S C +G C+ C G +G +C PC C +C P G C CA
Sbjct: 154 PPGASCHHVSGECHCPPGFTGPGCEQACQPGTFGKDCEHPCQCPGETWACHPASGACVCA 213
Query: 445 PGFRGTTCQR 474
G+ GT CQ+
Sbjct: 214 AGYHGTDCQQ 223
Score = 52.8 bits (125), Expect = 2e-07
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +1
Query: 325 SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRS 477
+G C S C G +G +C C C+ GA+C G C C PG+RG+ C+++
Sbjct: 87 TGDKCQSPCVSGMFGVHCEEHCACRKGATCHHVTGACLCPPGWRGSHCEQA 137
Score = 52.0 bits (123), Expect = 3e-07
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRSKCL 486
G C C G +G NC C C+NG SC P G C C G+ G C+ ++CL
Sbjct: 2 GPTCLQACPAGLYGKNCQHSCLCRNGGSCDPILGQCTCPEGWTGLACE-NECL 53
Score = 51.2 bits (121), Expect = 6e-07
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
C S C+ +G HC+ C + R+G C C C+NG C +G C C G+ G
Sbjct: 289 CDPVSGTCICPPGKTGGHCERGCPQDRFGKGCEHKCACRNGGLCHATNGSCSCPLGWMGP 348
Query: 463 TCQRS 477
C+ +
Sbjct: 349 HCEHA 353
Score = 48.9 bits (115), Expect = 3e-06
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +1
Query: 325 SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRSKCL 486
+G+ C++ C G G C L C C NG +C G C C G+ G CQ S C+
Sbjct: 44 TGLACENECLPGHHGAGCRLNCSCLNGGTCDRLTGHCRCPAGWTGDKCQ-SPCV 96
Score = 47.8 bits (112), Expect = 6e-06
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
C S CL G C+ C G +G C C G C P G+C C PG GT
Sbjct: 418 CDPVSGRCLCPAGFRGQFCERGCKPGFFGDGCLQQCNSPTGVPCDPISGLCLCPPGRAGT 477
Query: 463 TC 468
TC
Sbjct: 478 TC 479
>gi|38083892|ref|XP_355093.1| similar to MEGF10 protein [Mus
musculus]
Length = 619
Score = 63.5 bits (153), Expect = 1e-10
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
G +C S C WGP+CS C CKN A C+P G C CA G+RG C+
Sbjct: 132 GTNCSSACDGDHWGPHCSSRCQCKNRALCNPITGACHCAAGYRGWRCE 179
Score = 63.2 bits (152), Expect = 1e-10
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
GV C C G WG C+L C C NG +C+ DG C CAPG+RG C+
Sbjct: 518 GVDCSIRCPSGTWGFGCNLTCQCLNGGACNTLDGTCTCAPGWRGAKCE 565
Score = 61.6 bits (148), Expect = 4e-10
Identities = 27/62 (43%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
CH S C SG++C+ C+ G +G C C C+NGA C G C CAPGF+GT
Sbjct: 417 CHPMSGECGCKPGWSGLYCNETCSPGFYGEACQQICSCQNGADCDSVTGRCACAPGFKGT 476
Query: 463 TC 468
C
Sbjct: 477 DC 478
Score = 60.8 bits (146), Expect = 7e-10
Identities = 26/63 (41%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
CH + C G C C EGR+G NCS C C NG +C G C C+PG+ G
Sbjct: 246 CHHVTGECSCPSGWMGTVCGQPCPEGRFGKNCSQECQCHNGGTCDAATGQCHCSPGYTGE 305
Query: 463 TCQ 471
CQ
Sbjct: 306 RCQ 308
Score = 58.5 bits (140), Expect = 4e-09
Identities = 27/63 (42%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 292 NCHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRG 459
+C S + C + G C + C GR+G NCS C CKN A CSP DG C C G+ G
Sbjct: 459 DCDSVTGRCACAPGFKGTDCSTPCPLGRYGINCSSRCGCKNDAVCSPVDGSCICKAGWHG 518
Query: 460 TTC 468
C
Sbjct: 519 VDC 521
Score = 55.1 bits (131), Expect = 4e-08
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = +1
Query: 280 PTLTNCHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRG 459
P CH A+ G C+ C +G +G +C C C+NGA+C G C C+PG+ G
Sbjct: 162 PITGACHCAAGY---RGWRCEDRCEQGTYGNDCHQRCQCQNGATCDHITGECRCSPGYTG 218
Query: 460 TTCQ 471
C+
Sbjct: 219 AFCE 222
Score = 52.0 bits (123), Expect = 3e-07
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 325 SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTC 468
+G C+ +C G+ GP+C C C+NG C G C C G+ GT C
Sbjct: 217 TGAFCEDLCPPGKHGPHCEQRCPCQNGGVCHHVTGECSCPSGWMGTVC 264
Score = 48.9 bits (115), Expect = 3e-06
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGT 462
C +A+ C S G C C G +G C+ C C NG C G C C GF G
Sbjct: 289 CDAATGQCHCSPGYTGERCQDECPVGSYGVRCAEACRCVNGGKCYHVSGTCLCEAGFSGE 348
Query: 463 TCQRSKC 483
C+ C
Sbjct: 349 LCEARLC 355
Score = 45.8 bits (107), Expect = 2e-05
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTT 465
G C+ C +G +G NC+ C C + C P G C C PG+ T
Sbjct: 561 GAKCEFPCQDGTYGLNCAERCDCSHADGCHPTTGHCRCLPGWSACT 606
Score = 30.0 bits (66), Expect = 1.4
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = +1
Query: 265 LAFQMPTLTNCHSASPLCL-VSGVHCDSVCAEGRWGPNCSLPCYCKNGAS---CSPDDGI 432
L +Q+ L H+A PL L G H + E S C CK G S C+
Sbjct: 382 LHYQVDGLGGEHAARPLLLEFLGYHTSAFGIEWSCCHPMSGECGCKPGWSGLYCNET--- 438
Query: 433 CECAPGFRGTTCQR 474
C+PGF G CQ+
Sbjct: 439 --CSPGFYGEACQQ 450
>gi|38079068|ref|XP_149548.3| similar to MEGF6 [Mus musculus]
Length = 787
Score = 63.2 bits (152), Expect = 1e-10
Identities = 29/64 (45%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Frame = +1
Query: 295 CHSASPLCLV----SGVHCDSVCAEGRWGPNCSLPC-YCKNGASCSPDDGICECAPGFRG 459
CH + CL +G C + C EGRWG C C C++GASC P+ G C C PGF G
Sbjct: 628 CHRVTGECLCPPGKTGEDCGADCPEGRWGLGCQEICPACEHGASCDPETGTCLCLPGFVG 687
Query: 460 TTCQ 471
+ CQ
Sbjct: 688 SRCQ 691
Score = 60.1 bits (144), Expect = 1e-09
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = +1
Query: 325 SGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
+G+ C+ C +G NCS PC C+NG +C P G C C PG G C+
Sbjct: 424 TGIICNETCPPDTFGKNCSSPCICQNGGTCDPVSGACRCPPGVSGAHCE 472
Score = 56.6 bits (135), Expect = 1e-08
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 313 LCLVS--GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRS 477
LCL G C C G +G C + C C N C P G C CAPG+ G +CQR+
Sbjct: 680 LCLPGFVGSRCQDACPAGWFGTGCQMRCACANDGHCHPATGRCSCAPGWTGLSCQRA 736
Score = 55.8 bits (133), Expect = 2e-08
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = +1
Query: 292 NCHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNG-ASCSPDDGICECAPGFR 456
+CH A+ C + G+ C C G WGP+C PC C G +C G+C C G+
Sbjct: 714 HCHPATGRCSCAPGWTGLSCQRACDSGHWGPDCIHPCNCSAGHGNCDAVSGLCLCEAGYE 773
Query: 457 GTTCQR 474
G C++
Sbjct: 774 GPQCEQ 779
Score = 50.4 bits (119), Expect = 1e-06
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = +1
Query: 292 NCHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGIC--ECAPGF 453
+C+S C G C++ C G +GP C C C+ G +C P G C +C PG+
Sbjct: 540 SCNSKDGSCSCKAGFQGERCEAECEPGSFGPGCRNRCTCRPGVACDPVSGECRTQCPPGY 599
Query: 454 RGTTC 468
+G C
Sbjct: 600 QGEDC 604
Score = 49.7 bits (117), Expect = 2e-06
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = +1
Query: 322 VSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTC 468
VSG HC+ C +G +G +C C+C N C G C C PG G C
Sbjct: 466 VSGAHCEDGCPKGFYGKHCRKKCHCANRGRCHRLYGACLCDPGLYGRFC 514
Score = 47.8 bits (112), Expect = 6e-06
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNG--ASCSPDDGICECAPGFR 456
CH CL G C C +GP CS C C+ SC+ DG C C GF+
Sbjct: 496 CHRLYGACLCDPGLYGRFCHLACPPWAFGPGCSEDCLCEQSHTRSCNSKDGSCSCKAGFQ 555
Query: 457 GTTCQ 471
G C+
Sbjct: 556 GERCE 560
Score = 40.4 bits (93), Expect = 0.001
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 346 VCAEGRWGPNCSLPCY-CKNGASCSPDDGICECAPGFRGTTCQRS 477
VC + +G +CSL C C+NG +C P C+C G+ G C +
Sbjct: 387 VCLDHSFGHDCSLTCDDCRNGGTCFPGLDGCDCPEGWTGIICNET 431
Score = 27.7 bits (60), Expect = 6.9
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Frame = +1
Query: 394 CKNGASCSPDDGICECAPGFR----GTTC 468
C++ +P +CEC PGFR G TC
Sbjct: 49 CQHRCVNTPGSYLCECKPGFRLHTDGRTC 77
>gi|38092186|ref|XP_358747.1| similar to Endothelial cells scavenger
receptor precursor (Acetyl LDL receptor) (Scavenger
receptor class F member 1) [Mus musculus]
Length = 820
Score = 56.2 bits (134), Expect = 2e-08
Identities = 26/60 (43%), Positives = 30/60 (50%)
Frame = +1
Query: 292 NCHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
NCH++ C+ C VC G WGP CS C C G CS G C C PGF G C+
Sbjct: 197 NCHTSP--CMQDSGRC--VCLPGWWGPECSRKCQCVRG-QCSVTSGHCSCPPGFHGIRCE 251
Score = 48.9 bits (115), Expect = 3e-06
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPC-YCKNGASCSPDDGICE-CAPGFRGTTCQR 474
G+ C+ C G +G C C +C+ A+CSP G CE C PG+ GT C++
Sbjct: 247 GIRCELPCNPGHYGAQCKESCGHCELNATCSPVTGNCESCKPGWNGTQCKQ 297
Score = 48.5 bits (114), Expect = 4e-06
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = +1
Query: 340 DSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
D C WG C PC C C P G+C C PG+ TC+R
Sbjct: 120 DCQCQPNYWGRLCEFPCTCGPHGQCDPKTGLCHCDPGWWSPTCRR 164
Score = 48.1 bits (113), Expect = 5e-06
Identities = 26/68 (38%), Positives = 30/68 (44%)
Frame = +1
Query: 295 CHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
C+ AS +G VC G WG CS C C + C D G C C PG+ G C R
Sbjct: 168 CNPASRCDQATGT---CVCPPGWWGRRCSFSCNCHT-SPCMQDSGRCVCLPGWWGPECSR 223
Query: 475 SKCLFRGQ 498
RGQ
Sbjct: 224 KCQCVRGQ 231
Score = 46.2 bits (108), Expect = 2e-05
Identities = 22/61 (36%), Positives = 25/61 (40%)
Frame = +1
Query: 295 CHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
C + LC HCD G W P C PC C + C G C C PG+ G C
Sbjct: 144 CDPKTGLC-----HCDP----GWWSPTCRRPCQCNPASRCDQATGTCVCPPGWWGRRCSF 194
Query: 475 S 477
S
Sbjct: 195 S 195
Score = 45.1 bits (105), Expect = 4e-05
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
G C S C WG +C C C C P G C+C P + G C+
Sbjct: 86 GAQCSSRCPGQYWGHDCRETCPCHPRGQCEPATGDCQCQPNYWGRLCE 133
Score = 42.0 bits (97), Expect = 4e-04
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICE 438
C + + C+ S G C+S C G G NCS+PC C G C P G C+
Sbjct: 365 CDAVTGECVCSAGYWGTSCNSSCPAGFHGNNCSMPCQCPEGL-CHPVSGTCQ 415
Score = 40.4 bits (93), Expect = 0.001
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +1
Query: 292 NCHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
+C P L G C++ C G +G CS C +C G C C+ G+ GT+C
Sbjct: 327 HCQHCDPGWL--GHRCENPCPLGTFGKGCSSTCPACAQGTCDAVTGECVCSAGYWGTSCN 384
Query: 472 RS 477
S
Sbjct: 385 SS 386
Score = 30.8 bits (68), Expect = 0.82
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 370 PNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRSKC 483
P C P C+ C G+C C PGF G C S+C
Sbjct: 58 PICEGPDACRKEEVCVKP-GLCRCKPGFFGAQCS-SRC 93
>gi|38091484|ref|XP_354628.1| similar to Endothelial cells scavenger
receptor precursor (Acetyl LDL receptor) (Scavenger
receptor class F member 1) [Mus musculus]
Length = 820
Score = 56.2 bits (134), Expect = 2e-08
Identities = 26/60 (43%), Positives = 30/60 (50%)
Frame = +1
Query: 292 NCHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
NCH++ C+ C VC G WGP CS C C G CS G C C PGF G C+
Sbjct: 197 NCHTSP--CMQDSGRC--VCLPGWWGPECSRKCQCVRG-QCSVTSGHCSCPPGFHGIRCE 251
Score = 48.9 bits (115), Expect = 3e-06
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPC-YCKNGASCSPDDGICE-CAPGFRGTTCQR 474
G+ C+ C G +G C C +C+ A+CSP G CE C PG+ GT C++
Sbjct: 247 GIRCELPCNPGHYGAQCKESCGHCELNATCSPVTGNCESCKPGWNGTQCKQ 297
Score = 48.5 bits (114), Expect = 4e-06
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = +1
Query: 340 DSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
D C WG C PC C C P G+C C PG+ TC+R
Sbjct: 120 DCQCQPNYWGRLCEFPCTCGPHGQCDPKTGLCHCDPGWWSPTCRR 164
Score = 48.1 bits (113), Expect = 5e-06
Identities = 26/68 (38%), Positives = 30/68 (44%)
Frame = +1
Query: 295 CHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
C+ AS +G VC G WG CS C C + C D G C C PG+ G C R
Sbjct: 168 CNPASRCDQATGT---CVCPPGWWGRRCSFSCNCHT-SPCMQDSGRCVCLPGWWGPECSR 223
Query: 475 SKCLFRGQ 498
RGQ
Sbjct: 224 KCQCVRGQ 231
Score = 46.2 bits (108), Expect = 2e-05
Identities = 22/61 (36%), Positives = 25/61 (40%)
Frame = +1
Query: 295 CHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
C + LC HCD G W P C PC C + C G C C PG+ G C
Sbjct: 144 CDPKTGLC-----HCDP----GWWSPTCRRPCQCNPASRCDQATGTCVCPPGWWGRRCSF 194
Query: 475 S 477
S
Sbjct: 195 S 195
Score = 45.1 bits (105), Expect = 4e-05
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
G C S C WG +C C C C P G C+C P + G C+
Sbjct: 86 GAQCSSRCPGQYWGHDCRETCPCHPRGQCEPATGDCQCQPNYWGRLCE 133
Score = 42.0 bits (97), Expect = 4e-04
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICE 438
C + + C+ S G C+S C G G NCS+PC C G C P G C+
Sbjct: 365 CDAVTGECVCSAGYWGTSCNSSCPAGFHGNNCSMPCQCPEGL-CHPVSGTCQ 415
Score = 40.4 bits (93), Expect = 0.001
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +1
Query: 292 NCHSASPLCLVSGVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQ 471
+C P L G C++ C G +G CS C +C G C C+ G+ GT+C
Sbjct: 327 HCQHCDPGWL--GHRCENPCPLGTFGKGCSSTCPACAQGTCDAVTGECVCSAGYWGTSCN 384
Query: 472 RS 477
S
Sbjct: 385 SS 386
Score = 30.8 bits (68), Expect = 0.82
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 370 PNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRSKC 483
P C P C+ C G+C C PGF G C S+C
Sbjct: 58 PICEGPDACRKEEVCVKP-GLCRCKPGFFGAQCS-SRC 93
>gi|8567412|ref|NP_038718.1| endothelial-specific receptor tyrosine
kinase [Mus musculus]
Length = 1125
Score = 56.2 bits (134), Expect = 2e-08
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 349 CAEGRWGPNCSLPCY-CKNGASCSPDDGICECAPGFRGTTCQRS 477
C +WGP+CS PC CKN C D G C C PGF G TC+++
Sbjct: 212 CEAQKWGPDCSRPCTTCKNNGVCHEDTGECICPPGFMGRTCEKA 255
Score = 48.5 bits (114), Expect = 4e-06
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +1
Query: 328 GVHCDSVCAEGRWGPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQR 474
G+ C+ C G +GP+C L C+C N C G C C+ G++G C++
Sbjct: 296 GLQCNEACPSGYYGPDCKLRCHCTNEEICDRFQG-CLCSQGWQGLQCEK 343
Score = 39.7 bits (91), Expect = 0.002
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 8/69 (11%)
Frame = +1
Query: 295 CHSASPLCLVS----GVHCDSVCAEGRWGPNCSLPCY----CKNGASCSPDDGICECAPG 450
CH + C+ G C+ C +G C C CK+ C PD C CA G
Sbjct: 234 CHEDTGECICPPGFMGRTCEKACEPHTFGRTCKERCSGPEGCKSYVFCLPDPYGCSCATG 293
Query: 451 FRGTTCQRS 477
+RG C +
Sbjct: 294 WRGLQCNEA 302
Database: RefSeq (Mus Musculus/Amino Acid)
Posted date: Apr 12, 2004 5:36 AM
Number of letters in database: 11,906,519
Number of sequences in database: 26,199
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 11,906,519
effective HSP length: 97
effective length of database: 9,365,216
effective search space used: 1376686752
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)