Search to RefSeq (Human) database
Query= 20050322C-001159 (20050322C-001159) 20050322C-001159
(1042 letters)
Database: RefSeq (Homo Sapiens/Amino Acid)
28,818 sequences; 14,641,209 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|49574502|ref|NP_057327.2| NAD(P)H:quinone oxidoreductase type... 487 e-141
Alignment gi|6552328|ref|NP_015565.1| cytochrome b5 reductase soluble isof... 371 e-103
Alignment gi|4503327|ref|NP_000389.1| cytochrome b5 reductase membrane-bou... 371 e-103
Alignment gi|47778923|ref|NP_057313.2| cytochrome b5 reductase b5R.2 isofo... 338 8e-94
Alignment gi|47778927|ref|NP_001001336.1| cytochrome b5 reductase b5R.2 is... 272 3e-73
Alignment gi|7705899|ref|NP_057314.1| NADPH cytochrome B5 oxidoreductase [... 106 3e-23
Alignment gi|19923907|ref|NP_612390.1| hypothetical protein BC008322 [Homo... 42 6e-04
Alignment gi|51493333|ref|XP_497571.1| PREDICTED: similar to peptidyl-Pro ... 36 0.053
Alignment gi|41281573|ref|NP_055767.2| bromo adjacent homology domain cont... 34 0.15
Alignment gi|27734813|ref|NP_775850.1| hypothetical protein FLJ40224 [Homo... 34 0.15
>gi|49574502|ref|NP_057327.2| NAD(P)H:quinone oxidoreductase type 3,
polypeptide A2 [Homo sapiens]
Length = 305
Score = 487 bits (1254), Expect(2) = e-141
Identities = 232/254 (91%), Positives = 245/254 (96%)
Frame = +1
Query: 196 VTLLDPNEKYLLRLLDKTTVNHNTKKFRFALPTAHHVLGLPVGKHVYLSARIDGSLVIRP 375
VTLLDPNEKYLLRLLDKTTV+HNTK+FRFALPTAHH LGLPVGKH+YLS RIDGSLVIRP
Sbjct: 38 VTLLDPNEKYLLRLLDKTTVSHNTKRFRFALPTAHHTLGLPVGKHIYLSTRIDGSLVIRP 97
Query: 376 YTPITSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLNSLKLGDVVEFRGPSGLLTYTG 555
YTP+TSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYL+SLK+GDVVEFRGPSGLLTYTG
Sbjct: 98 YTPVTSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLDSLKVGDVVEFRGPSGLLTYTG 157
Query: 556 KGKFSIQPNKKSPPEPRVARKLGMIAGGTGITPMLQLIRAILKDPEDPTQCFLLFANQTE 735
KG F+IQPNKKSPPEPRVA+KLGMIAGGTGITPMLQLIRAILK PEDPTQCFLLFANQTE
Sbjct: 158 KGHFNIQPNKKSPPEPRVAKKLGMIAGGTGITPMLQLIRAILKVPEDPTQCFLLFANQTE 217
Query: 736 KDIILREDLEELXARHPNQFKLWFTLDQPPEDWTYSKGFVSADMIREHLPAPXKDVLLLL 915
KDIILREDLEEL AR+PN+FKLWFTLD PP+DW YSKGFV+ADMIREHLPAP DVL+LL
Sbjct: 218 KDIILREDLEELQARYPNRFKLWFTLDHPPKDWAYSKGFVTADMIREHLPAPGDDVLVLL 277
Query: 916 CGPPPMVQLACHPN 957
CGPPPMVQLACHPN
Sbjct: 278 CGPPPMVQLACHPN 291
Score = 33.1 bits (74), Expect(2) = e-141
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 951 PQLDKLGYSQKMRFT 995
P LDKLGYSQKMRFT
Sbjct: 290 PNLDKLGYSQKMRFT 304
>gi|6552328|ref|NP_015565.1| cytochrome b5 reductase soluble isoform
[Homo sapiens]
Length = 278
Score = 371 bits (953), Expect = e-103
Identities = 168/254 (66%), Positives = 214/254 (84%)
Frame = +1
Query: 196 VTLLDPNEKYLLRLLDKTTVNHNTKKFRFALPTAHHVLGLPVGKHVYLSARIDGSLVIRP 375
+TL P+ KY LRL+D+ ++H+T++FRFALP+ H+LGLPVG+H+YLSARIDG+LV+RP
Sbjct: 11 ITLESPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRP 70
Query: 376 YTPITSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLNSLKLGDVVEFRGPSGLLTYTG 555
YTPI+SD+D+G+VDLVIKVY K HPKFP GGKMSQYL S+++GD +EFRGPSGLL Y G
Sbjct: 71 YTPISSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQG 130
Query: 556 KGKFSIQPNKKSPPEPRVARKLGMIAGGTGITPMLQLIRAILKDPEDPTQCFLLFANQTE 735
KGKF+I+P+KKS P R + +GMIAGGTGITPMLQ+IRAI+KDP+D T C LLFANQTE
Sbjct: 131 KGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTE 190
Query: 736 KDIILREDLEELXARHPNQFKLWFTLDQPPEDWTYSKGFVSADMIREHLPAPXKDVLLLL 915
KDI+LR +LEEL +H +FKLW+TLD+ PE W Y +GFV+ +MIR+HLP P ++ L+L+
Sbjct: 191 KDILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLM 250
Query: 916 CGPPPMVQLACHPN 957
CGPPPM+Q AC PN
Sbjct: 251 CGPPPMIQYACLPN 264
>gi|4503327|ref|NP_000389.1| cytochrome b5 reductase membrane-bound
isoform [Homo sapiens]
Length = 301
Score = 371 bits (953), Expect = e-103
Identities = 168/254 (66%), Positives = 214/254 (84%)
Frame = +1
Query: 196 VTLLDPNEKYLLRLLDKTTVNHNTKKFRFALPTAHHVLGLPVGKHVYLSARIDGSLVIRP 375
+TL P+ KY LRL+D+ ++H+T++FRFALP+ H+LGLPVG+H+YLSARIDG+LV+RP
Sbjct: 34 ITLESPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRP 93
Query: 376 YTPITSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLNSLKLGDVVEFRGPSGLLTYTG 555
YTPI+SD+D+G+VDLVIKVY K HPKFP GGKMSQYL S+++GD +EFRGPSGLL Y G
Sbjct: 94 YTPISSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQG 153
Query: 556 KGKFSIQPNKKSPPEPRVARKLGMIAGGTGITPMLQLIRAILKDPEDPTQCFLLFANQTE 735
KGKF+I+P+KKS P R + +GMIAGGTGITPMLQ+IRAI+KDP+D T C LLFANQTE
Sbjct: 154 KGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTE 213
Query: 736 KDIILREDLEELXARHPNQFKLWFTLDQPPEDWTYSKGFVSADMIREHLPAPXKDVLLLL 915
KDI+LR +LEEL +H +FKLW+TLD+ PE W Y +GFV+ +MIR+HLP P ++ L+L+
Sbjct: 214 KDILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLM 273
Query: 916 CGPPPMVQLACHPN 957
CGPPPM+Q AC PN
Sbjct: 274 CGPPPMIQYACLPN 287
>gi|47778923|ref|NP_057313.2| cytochrome b5 reductase b5R.2 isoform
1 [Homo sapiens]
Length = 276
Score = 338 bits (866), Expect(2) = 8e-94
Identities = 151/254 (59%), Positives = 199/254 (78%)
Frame = +1
Query: 196 VTLLDPNEKYLLRLLDKTTVNHNTKKFRFALPTAHHVLGLPVGKHVYLSARIDGSLVIRP 375
+TL DP KY L L++K ++HNT++FRF LP+ HVLGLPVG +V L A+ID LV+R
Sbjct: 9 ITLQDPEAKYPLPLIEKEKISHNTRRFRFGLPSPDHVLGLPVGNYVQLLAKIDNELVVRA 68
Query: 376 YTPITSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLNSLKLGDVVEFRGPSGLLTYTG 555
YTP++SD+D+G+VDL+IK+Y K VHP++PEGGKM+QYL ++K+G+ + FRGP G L Y G
Sbjct: 69 YTPVSSDDDRGFVDLIIKIYFKNVHPQYPEGGKMTQYLENMKIGETIFFRGPRGRLFYHG 128
Query: 556 KGKFSIQPNKKSPPEPRVARKLGMIAGGTGITPMLQLIRAILKDPEDPTQCFLLFANQTE 735
G I+P++ S P+ +A LGMIAGGTGITPMLQLIR I KDP D T+ L+FANQTE
Sbjct: 129 PGNLGIRPDQTSEPKKTLADHLGMIAGGTGITPMLQLIRHITKDPSDRTRMSLIFANQTE 188
Query: 736 KDIILREDLEELXARHPNQFKLWFTLDQPPEDWTYSKGFVSADMIREHLPAPXKDVLLLL 915
+DI++R++LEE+ HP+QF LW+TLD+PP W YS GFV+ADMI+EHLP P K L+L+
Sbjct: 189 EDILVRKELEEIARTHPDQFNLWYTLDRPPIGWKYSSGFVTADMIKEHLPPPAKSTLILV 248
Query: 916 CGPPPMVQLACHPN 957
CGPPP++Q A HPN
Sbjct: 249 CGPPPLIQTAAHPN 262
Score = 25.0 bits (53), Expect(2) = 8e-94
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 951 PQLDKLGYSQKMRFT 995
P L+KLGY+Q M FT
Sbjct: 261 PNLEKLGYTQDMIFT 275
>gi|47778927|ref|NP_001001336.1| cytochrome b5 reductase b5R.2
isoform 2 [Homo sapiens]
Length = 237
Score = 272 bits (695), Expect = 3e-73
Identities = 123/210 (58%), Positives = 165/210 (78%)
Frame = +1
Query: 196 VTLLDPNEKYLLRLLDKTTVNHNTKKFRFALPTAHHVLGLPVGKHVYLSARIDGSLVIRP 375
+TL DP KY L L++K ++HNT++FRF LP+ HVLGLPVG +V L A+ID LV+R
Sbjct: 9 ITLQDPEAKYPLPLIEKEKISHNTRRFRFGLPSPDHVLGLPVGNYVQLLAKIDNELVVRA 68
Query: 376 YTPITSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLNSLKLGDVVEFRGPSGLLTYTG 555
YTP++SD+D+G+VDL+IK+Y K VHP++PEGGKM+QYL ++K+G+ + FRGP G L Y G
Sbjct: 69 YTPVSSDDDRGFVDLIIKIYFKNVHPQYPEGGKMTQYLENMKIGETIFFRGPRGRLFYHG 128
Query: 556 KGKFSIQPNKKSPPEPRVARKLGMIAGGTGITPMLQLIRAILKDPEDPTQCFLLFANQTE 735
G I+P++ S P+ +A LGMIAGGTGITPMLQLIR I KDP D T+ L+FANQTE
Sbjct: 129 PGNLGIRPDQTSEPKKTLADHLGMIAGGTGITPMLQLIRHITKDPSDRTRMSLIFANQTE 188
Query: 736 KDIILREDLEELXARHPNQFKLWFTLDQPP 825
+DI++R++LEE+ HP+QF LW+TLD+PP
Sbjct: 189 EDILVRKELEEIARTHPDQFNLWYTLDRPP 218
>gi|7705899|ref|NP_057314.1| NADPH cytochrome B5 oxidoreductase
[Homo sapiens]
Length = 487
Score = 106 bits (264), Expect = 3e-23
Identities = 75/248 (30%), Positives = 120/248 (48%), Gaps = 12/248 (4%)
Frame = +1
Query: 232 RLLDKTTVNHNTKKFRFALPTAHHVLGLPVGKHVYLSARIDGSLVIRPYTPITSD----- 396
+L+ K V H+T+ F LP + H L +P+G+HVYL I G+ +++PYTP++
Sbjct: 245 QLISKEDVTHDTRLFCLMLPPSTH-LQVPIGQHVYLKLPITGTEIVKPYTPVSGSLLSEF 303
Query: 397 -----EDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLNSLKLGDVVEFRGPSGLLTYTGKG 561
+ Y+ +IK+Y G+ PE L+ L++GD V P +G
Sbjct: 304 KEPVLPNNKYIYFLIKIYPTGLFT--PE-------LDRLQIGDFVSVSSP--------EG 346
Query: 562 KFSIQPNKKSPPEPRVARKLGMIAGGTGITPMLQLIRAILKDPEDPTQCFLLFANQTEKD 741
F I ++ L ++A GTG TPM++++ L D + L+F N+TE D
Sbjct: 347 NFKISKFQE-------LEDLFLLAAGTGFTPMVKILNYALTDIPSLRKVKLMFFNKTEDD 399
Query: 742 IILREDLEELXARHPNQFKLWFTLDQPPEDWTYSKGFVSADMIREHLP--APXKDVLLLL 915
II R LE+L A + + F L P +W +G +S ++ E L VL+ +
Sbjct: 400 IIWRSQLEKL-AFKDKRLDVEFVLSAPISEWNGKQGHISPALLSEFLKRNLDKSKVLVCI 458
Query: 916 CGPPPMVQ 939
CGP P +
Sbjct: 459 CGPVPFTE 466
>gi|19923907|ref|NP_612390.1| hypothetical protein BC008322 [Homo
sapiens]
Length = 312
Score = 42.4 bits (98), Expect = 6e-04
Identities = 30/129 (23%), Positives = 62/129 (48%), Gaps = 16/129 (12%)
Frame = +1
Query: 595 PEPRVA-RKLGMIAGGTGITPMLQLIR---AILKDPEDPTQCF------LLFANQTEKDI 744
P+P A R L +IAGG GI P+L ++R +L++ + + L ++ + ++
Sbjct: 163 PQPADASRNLVLIAGGVGINPLLSILRHAADLLREQANKRNGYEIGTIKLFYSAKNTSEL 222
Query: 745 ILREDLEELXARHPNQFKLWFTLDQPPEDWT------YSKGFVSADMIREHLPAPXKDVL 906
+ ++++ +L P + + + ++G ++ IR+H+ K+ L
Sbjct: 223 LFKKNILDLVNEFPEKIACSLHVTKQTTQINAELKPYITEGRITEKEIRDHI---SKETL 279
Query: 907 LLLCGPPPM 933
+CGPPPM
Sbjct: 280 FYICGPPPM 288
>gi|51493333|ref|XP_497571.1| PREDICTED: similar to peptidyl-Pro cis
trans isomerase [Homo sapiens]
Length = 283
Score = 35.8 bits (81), Expect = 0.053
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +2
Query: 350 STAVLSSGPTLPSPAMRTKATWILSSRST*RACTPNFLREGRCLST*IA*SLGMWWSFEG 529
++A S GP+ S + + IL SRS R+C P+ R G S + L G
Sbjct: 18 TSAAASLGPSSSSSSAPSAPLHILGSRSWRRSCVPSSSRPGAQPSWSVVVELARLRREGG 77
Query: 530 PVG-CSLTPGKESSAFSPTRNLRRNPEWPGN 619
P+ PG SS S + R P W N
Sbjct: 78 PINPPRCLPGTRSSLLSAWSSSRARPPWTPN 108
>gi|41281573|ref|NP_055767.2| bromo adjacent homology domain
containing 1 [Homo sapiens]
Length = 780
Score = 34.3 bits (77), Expect = 0.15
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 594 AGTPSGQETGNDCRRHRDHPDAAADPGHPERPRRSNP 704
+G+ SG TG+ CR H AA P HP++PR P
Sbjct: 543 SGSKSGLRTGSSCR-HTARSKAARRPSHPKQPRVQRP 578
>gi|27734813|ref|NP_775850.1| hypothetical protein FLJ40224 [Homo
sapiens]
Length = 241
Score = 34.3 bits (77), Expect = 0.15
Identities = 36/130 (27%), Positives = 46/130 (35%), Gaps = 1/130 (0%)
Frame = +2
Query: 68 GGGHAAPSAHRVQSCWLPWGWGC*VCLA*LWAPTSCGDPAGRWSRS-WTPMKSTCCDC*I 244
GGG +A Q P W V W SC A RW S W P++ +
Sbjct: 45 GGGSPTETAESQQLGKPPEFW---VSAHPGWLQVSCAHRASRWDASRWHPLQRFFARRGV 101
Query: 245 KRP*TTTLRSSALPCPPPTTFWGCLWANMSTSLPASTAVLSSGPTLPSPAMRTKATWILS 424
+RP + S LP PP + C L+ PT S A R+ T L+
Sbjct: 102 RRPNPSV--PSPLPKPPVPSAGSC-------------EPLAPPPTSASGASRSWVTQTLA 146
Query: 425 SRST*RACTP 454
R C P
Sbjct: 147 EAGAYRGCRP 156
Database: RefSeq (Homo Sapiens/Amino Acid)
Posted date: Mar 18, 2005 8:02 PM
Number of letters in database: 14,641,209
Number of sequences in database: 28,818
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 14,641,209
effective HSP length: 102
effective length of database: 11,701,773
effective search space used: 2855232612
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeq (Mouse) database
Query= 20050322C-001159 (20050322C-001159) 20050322C-001159
(1042 letters)
Database: RefSeq (Mus Musculus/Amino Acid)
26,301 sequences; 12,533,744 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|21312524|ref|NP_082333.1| cytochrome b5 reductase 1 (B5R.1) [... 479 e-138
Alignment gi|19745150|ref|NP_084063.1| diaphorase 1 [Mus musculus] 363 e-101
Alignment gi|28893247|ref|NP_796190.1| cytochrome b5 reductase b5R.2 [Mus ... 340 8e-94
Alignment gi|28916667|ref|NP_077157.1| NADPH cytochrome B5 oxidoreductase ... 105 5e-23
Alignment gi|30425208|ref|NP_780680.1| RIKEN cDNA 2810410C14 gene [Mus mus... 91 9e-19
Alignment gi|21703914|ref|NP_663435.1| cDNA sequence BC019806 [Mus musculus] 46 3e-05
Alignment gi|51706327|ref|XP_130491.4| expressed sequence AW541238 [Mus mu... 35 0.099
Alignment gi|9790151|ref|NP_062814.1| phosphodiesterase 4B, cAMP specific ... 31 1.4
Alignment gi|7110609|ref|NP_034480.1| glutamate receptor, ionotropic, NMDA... 31 1.4
Alignment gi|27369722|ref|NP_766110.1| RIKEN cDNA 2410080H04 [Mus musculus] 31 1.4
>gi|21312524|ref|NP_082333.1| cytochrome b5 reductase 1 (B5R.1) [Mus
musculus]
Length = 305
Score = 479 bits (1232), Expect(2) = e-138
Identities = 227/254 (89%), Positives = 246/254 (96%)
Frame = +1
Query: 196 VTLLDPNEKYLLRLLDKTTVNHNTKKFRFALPTAHHVLGLPVGKHVYLSARIDGSLVIRP 375
VTL DP+EKYLLRLLDKTTV+HNT++FRFALPTAHH+LGLPVGKHVYLSARIDGSLVIRP
Sbjct: 38 VTLQDPDEKYLLRLLDKTTVSHNTRRFRFALPTAHHILGLPVGKHVYLSARIDGSLVIRP 97
Query: 376 YTPITSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLNSLKLGDVVEFRGPSGLLTYTG 555
YTP+TSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYL+SLK+GD+VEFRGPSGLL+Y G
Sbjct: 98 YTPVTSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLDSLKIGDMVEFRGPSGLLSYAG 157
Query: 556 KGKFSIQPNKKSPPEPRVARKLGMIAGGTGITPMLQLIRAILKDPEDPTQCFLLFANQTE 735
KG F+IQPNKKSPPE RVA+KLGMIAGGTGITPMLQLIRAILK PEDPTQCFLLFANQTE
Sbjct: 158 KGNFNIQPNKKSPPELRVAKKLGMIAGGTGITPMLQLIRAILKVPEDPTQCFLLFANQTE 217
Query: 736 KDIILREDLEELXARHPNQFKLWFTLDQPPEDWTYSKGFVSADMIREHLPAPXKDVLLLL 915
+DIILREDLEEL A++PN+FKLWFTLD PPEDWTYSKGFV+ADMI+EHLPAP +DVLLLL
Sbjct: 218 RDIILREDLEELQAQYPNRFKLWFTLDSPPEDWTYSKGFVTADMIQEHLPAPAEDVLLLL 277
Query: 916 CGPPPMVQLACHPN 957
CGPPPMVQLACHPN
Sbjct: 278 CGPPPMVQLACHPN 291
Score = 33.1 bits (74), Expect(2) = e-138
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 951 PQLDKLGYSQKMRFT 995
P LDKLGYSQKMRFT
Sbjct: 290 PNLDKLGYSQKMRFT 304
>gi|19745150|ref|NP_084063.1| diaphorase 1 [Mus musculus]
Length = 301
Score = 363 bits (932), Expect = e-101
Identities = 161/254 (63%), Positives = 212/254 (83%)
Frame = +1
Query: 196 VTLLDPNEKYLLRLLDKTTVNHNTKKFRFALPTAHHVLGLPVGKHVYLSARIDGSLVIRP 375
+TL +P+ KY LRL+DK ++ +T++FRFALP+ H+LGLP+G+H+YLS RIDG+LVIRP
Sbjct: 34 ITLENPDIKYPLRLIDKEVISPDTRRFRFALPSPQHILGLPIGQHIYLSTRIDGNLVIRP 93
Query: 376 YTPITSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLNSLKLGDVVEFRGPSGLLTYTG 555
YTP++SD+D+G+VDLV+KVY K HPKFP GGKMSQYL ++K+GD +EFRGP+GLL Y G
Sbjct: 94 YTPVSSDDDKGFVDLVVKVYFKDTHPKFPAGGKMSQYLENMKIGDTIEFRGPNGLLVYQG 153
Query: 556 KGKFSIQPNKKSPPEPRVARKLGMIAGGTGITPMLQLIRAILKDPEDPTQCFLLFANQTE 735
KGKF+I+ +KKS P R + +GMIAGGTGITPMLQ+IRA+LKDP D T C+LLFANQ+E
Sbjct: 154 KGKFAIRADKKSNPVVRTVKSVGMIAGGTGITPMLQVIRAVLKDPNDHTVCYLLFANQSE 213
Query: 736 KDIILREDLEELXARHPNQFKLWFTLDQPPEDWTYSKGFVSADMIREHLPAPXKDVLLLL 915
KDI+LR +LEEL H +FKLW+T+D+ P+ W YS+GFV+ +MIR+HLP P ++ L+L+
Sbjct: 214 KDILLRPELEELRNEHSARFKLWYTVDKAPDAWDYSQGFVNEEMIRDHLPTPGEEPLILM 273
Query: 916 CGPPPMVQLACHPN 957
CGPPPM+Q AC PN
Sbjct: 274 CGPPPMIQFACLPN 287
>gi|28893247|ref|NP_796190.1| cytochrome b5 reductase b5R.2 [Mus
musculus]
Length = 276
Score = 340 bits (872), Expect = 8e-94
Identities = 155/254 (61%), Positives = 198/254 (77%)
Frame = +1
Query: 196 VTLLDPNEKYLLRLLDKTTVNHNTKKFRFALPTAHHVLGLPVGKHVYLSARIDGSLVIRP 375
+TL DP KY L L++K ++HNT++FRF LP+ HVLGLPVG +V+L A+I+ LVIR
Sbjct: 9 ITLQDPEAKYPLPLIEKEQISHNTRRFRFGLPSPDHVLGLPVGNYVHLLAQINNELVIRA 68
Query: 376 YTPITSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLNSLKLGDVVEFRGPSGLLTYTG 555
YTP++SD+DQG+VDL+IK+Y K VHPK+PEGGKM+QYL ++K+GD + FRGP+G L Y
Sbjct: 69 YTPVSSDDDQGFVDLIIKIYFKNVHPKYPEGGKMTQYLENMKIGDTILFRGPTGRLFYNE 128
Query: 556 KGKFSIQPNKKSPPEPRVARKLGMIAGGTGITPMLQLIRAILKDPEDPTQCFLLFANQTE 735
G I+ NK S PE ++ LGMIAGGTGITPMLQLIR I KD D T+ LLFANQTE
Sbjct: 129 PGTLLIKANKTSEPEKKLVHHLGMIAGGTGITPMLQLIRHITKDTSDETRMSLLFANQTE 188
Query: 736 KDIILREDLEELXARHPNQFKLWFTLDQPPEDWTYSKGFVSADMIREHLPAPXKDVLLLL 915
+DI+LR++LEE+ H QF LW+TLD+PP DW YS GFVSADMI+EHLP P +D L+L+
Sbjct: 189 EDILLRKELEEVATTHHKQFNLWYTLDRPPSDWKYSSGFVSADMIKEHLPPPGEDTLILV 248
Query: 916 CGPPPMVQLACHPN 957
CGPPP++Q A HP+
Sbjct: 249 CGPPPLIQAAAHPS 262
>gi|28916667|ref|NP_077157.1| NADPH cytochrome B5 oxidoreductase
[Mus musculus]
Length = 494
Score = 105 bits (262), Expect = 5e-23
Identities = 72/245 (29%), Positives = 117/245 (47%), Gaps = 12/245 (4%)
Frame = +1
Query: 232 RLLDKTTVNHNTKKFRFALPTAHHVLGLPVGKHVYLSARIDGSLVIRPYTPITSD----- 396
+L+ K V H+T+ LP + H L +PVG+HVYL + G+ +++PYTP++
Sbjct: 252 QLISKEDVTHDTRLLCLMLPPSTH-LQVPVGQHVYLKLSVTGAEIVKPYTPVSDSLLSDF 310
Query: 397 -----EDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLNSLKLGDVVEFRGPSGLLTYTGKG 561
Y+ +IK+Y G+ PE L+ L++GD + GP +G
Sbjct: 311 KEPVLSPNKYIYFLIKIYPAGLFT--PE-------LDRLQIGDFISVSGP--------EG 353
Query: 562 KFSIQPNKKSPPEPRVARKLGMIAGGTGITPMLQLIRAILKDPEDPTQCFLLFANQTEKD 741
F + ++ L ++A GTG TPM+ ++ L + L+F N+TE D
Sbjct: 354 NFKVSKLQE-------VEDLFLLAAGTGFTPMVTVLNYALSHMSSLRKVKLMFFNKTEDD 406
Query: 742 IILREDLEELXARHPNQFKLWFTLDQPPEDWTYSKGFVSADMIREHLPAPXKD--VLLLL 915
II R LE+L R +F + F L P +W +G +S ++ E L ++ L +
Sbjct: 407 IIWRCQLEKLALRE-KRFDVEFVLSAPSPEWNGKQGHISRALLSEFLQRSSENSRAFLCI 465
Query: 916 CGPPP 930
CGP P
Sbjct: 466 CGPTP 470
>gi|30425208|ref|NP_780680.1| RIKEN cDNA 2810410C14 gene [Mus
musculus]
Length = 256
Score = 91.3 bits (225), Expect = 9e-19
Identities = 75/249 (30%), Positives = 115/249 (46%), Gaps = 8/249 (3%)
Frame = +1
Query: 205 LDPNEKYLLRLLDKTTVNHNTKKFRFALPTAHHVLGLPVGKHVYLSARIDGSLVIRPYTP 384
L P + V +T RF LP + LGL G+H+ L +DG + R YTP
Sbjct: 13 LSPETFLAFHISTMEKVTKDTYLVRFTLP-GNSRLGLRPGQHLILRGVVDGLEIQRAYTP 71
Query: 385 ITSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLNSLKLGDVVEFRGPSGLLTYTGKGK 564
I+ +GY D++IK Y G+ MSQY+ S + GD +RGP G Y
Sbjct: 72 ISPVTAEGYFDVLIKCYRTGL---------MSQYVESWRTGDTAFWRGPFGSFLY----- 117
Query: 565 FSIQPNKKSPPEPRVARKLGMIAGGTGITPMLQLIRAILKDPEDPTQCFLLFANQTEKDI 744
EP+ +L M+A GTG+ PM+ ++++I D +D T L+ +T + I
Sbjct: 118 -----------EPKKYGELLMLAAGTGLAPMVPILQSITDDEDDETFVTLVGCFKTFEGI 166
Query: 745 ILREDLEELXARHPNQFKLWFTLDQ--PPED--WTYSK----GFVSADMIREHLPAPXKD 900
L+ +E AR N + +F L Q PE W+Y G + +++ E + +
Sbjct: 167 YLKTFFQE-QARFWN-VQTFFVLSQEVSPEQLPWSYRDKTHFGRLGQELVAELVACCRRK 224
Query: 901 VLLLLCGPP 927
L+CG P
Sbjct: 225 PFTLVCGSP 233
>gi|21703914|ref|NP_663435.1| cDNA sequence BC019806 [Mus musculus]
Length = 311
Score = 46.2 bits (108), Expect = 3e-05
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 21/152 (13%)
Frame = +1
Query: 559 GKFSIQPNKKSPPEPRVARKLGMIAGGTGITPMLQLIR---AILKDPEDPTQCF------ 711
G+F P P R L +IAGG GI P+L ++R + +D D +
Sbjct: 156 GEFFFDPQPTDAP-----RNLILIAGGVGINPLLSILRHSADLHRDHADKGSGYEIGTVK 210
Query: 712 LLFANQTEKDIILREDLEELXARHPNQFKLWFTLDQPPEDWT------YSKGFVSADMIR 873
L ++ + +++ ++D+ +L P + F + + + + G ++ IR
Sbjct: 211 LFYSAKNTSELLFKKDILDLVHEFPEKISCSFHVTKQTAQISVELKPYVTDGRITEKEIR 270
Query: 874 EHLPAPXKDVLLLLCGPPPMVQL------ACH 951
+H+ A + L +CGPPPM +CH
Sbjct: 271 DHISA---ETLFYVCGPPPMTDFFSKHLESCH 299
>gi|51706327|ref|XP_130491.4| expressed sequence AW541238 [Mus
musculus]
Length = 772
Score = 34.7 bits (78), Expect = 0.099
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 594 AGTPSGQETGNDCRRHRDHPDAAADPGHPERPRRSNP 704
+G+ SG TG+ CR H AA P HP++PR P
Sbjct: 535 SGSKSGLRTGSSCR-HAVRSKAARRPSHPKQPRAQRP 570
>gi|9790151|ref|NP_062814.1| phosphodiesterase 4B, cAMP specific
[Mus musculus]
Length = 721
Score = 30.8 bits (68), Expect = 1.4
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Frame = -2
Query: 681 QDGPDQLQHRGDPCASGN-----HSQFPGHSGFRRRFLVGLNA--ELSFPGVSEQPTGPS 523
++GP + DP A + H+ FPGHS R FL L++ +LS +S + PS
Sbjct: 83 ENGPSPGRSPLDPQAGSSSGLVLHAAFPGHSQRRESFLYDLDSDYDLSPKAMSRNSSLPS 142
Query: 522 KLH--HIPKLQAIQVLRHLPSLR 460
+ H + QVL L S+R
Sbjct: 143 EQHGDDLIVTPFAQVLASLRSVR 165
>gi|7110609|ref|NP_034480.1| glutamate receptor, ionotropic, NMDA2C
(epsilon 3) [Mus musculus]
Length = 1239
Score = 30.8 bits (68), Expect = 1.4
Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Frame = +3
Query: 258 PQH*EVPLCPAHRPPRSG---AAC-GQTCLPLCPHRRQSCHQALHSHHQR*GPRLRGSCH 425
P+H +P A RS A C G C CP R SC + R P R C
Sbjct: 1080 PRHASLPSSVAEAFTRSNHLPARCTGHACACPCPQSRPSCRHVAQTQSLR-LPSYREVCV 1138
Query: 426 QGLPEGRA 449
+G+P G A
Sbjct: 1139 EGVPAGVA 1146
>gi|27369722|ref|NP_766110.1| RIKEN cDNA 2410080H04 [Mus musculus]
Length = 947
Score = 30.8 bits (68), Expect = 1.4
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +3
Query: 276 PLCPAHRPPRS-GAACGQTCLPLCPHRRQSCH 368
PLC PP G C Q C PLC H R CH
Sbjct: 571 PLCQRICPPGFYGHGCAQPC-PLCVHSRGPCH 601
Database: RefSeq (Mus Musculus/Amino Acid)
Posted date: Mar 11, 2005 8:00 PM
Number of letters in database: 12,533,744
Number of sequences in database: 26,301
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 12,533,744
effective HSP length: 101
effective length of database: 9,877,343
effective search space used: 2419949035
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)