Search to RefSeq (Human) database
Query= 20050322C-005468 (20050322C-005468) 20050322C-005468
(1128 letters)
Database: RefSeq (Homo Sapiens/Amino Acid)
28,818 sequences; 14,641,209 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|4759274|ref|NP_004777.1| thioredoxin-like 1 [Homo sapiens] 527 e-150
Alignment gi|50592994|ref|NP_003320.2| thioredoxin [Homo sapiens] 86 5e-17
Alignment gi|42516570|ref|NP_115619.4| thioredoxin domain-containing 2 [Ho... 74 2e-13
Alignment gi|51510891|ref|NP_001003936.1| thioredoxin domain containing 8 ... 65 9e-11
Alignment gi|5730104|ref|NP_006532.1| thioredoxin-like [Homo sapiens] 59 6e-09
Alignment gi|21361837|ref|NP_065095.2| thioredoxin family Trp26 [Homo sapi... 57 2e-08
Alignment gi|42794775|ref|NP_071368.3| thioredoxin domain containing 5 iso... 50 4e-06
Alignment gi|42794771|ref|NP_110437.2| thioredoxin domain containing 5 iso... 50 4e-06
Alignment gi|21361403|ref|NP_036605.2| thioredoxin 2 precursor [Homo sapiens] 44 2e-04
Alignment gi|21361657|ref|NP_005304.3| glucose regulated protein, 58kDa [H... 40 0.002
>gi|4759274|ref|NP_004777.1| thioredoxin-like 1 [Homo sapiens]
Length = 289
Score = 527 bits (1358), Expect = e-150
Identities = 258/267 (96%), Positives = 259/267 (97%)
Frame = +1
Query: 289 MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD 468
MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD
Sbjct: 1 MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD 60
Query: 469 VHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPGSNEDTDIP 648
VHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPGSNEDTDIP
Sbjct: 61 VHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPGSNEDTDIP 120
Query: 649 KGYMDLMPFINKAGCECLNESDEHGFDNCLRKDMTFLESDCDEQLLITVAFNQPVKLYSM 828
KGYMDLMPFINKAGCECLNESDEHGFDNCLRKD TFLESDCDEQLLITVAFNQPVKLYSM
Sbjct: 121 KGYMDLMPFINKAGCECLNESDEHGFDNCLRKDTTFLESDCDEQLLITVAFNQPVKLYSM 180
Query: 829 KFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQN 1008
KFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQN
Sbjct: 181 KFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQN 240
Query: 1009 VNSVTIFVQSNQGEEENTGIHILLLLG 1089
VNSVTIFVQSNQGEEE T I +G
Sbjct: 241 VNSVTIFVQSNQGEEETTRISYFTFIG 267
Score = 29.6 bits (65), Expect = 4.2
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 1062 RNSYFTFIGTPVQA 1103
R SYFTFIGTPVQA
Sbjct: 259 RISYFTFIGTPVQA 272
>gi|50592994|ref|NP_003320.2| thioredoxin [Homo sapiens]
Length = 105
Score = 85.9 bits (211), Expect = 5e-17
Identities = 42/102 (41%), Positives = 56/102 (54%)
Frame = +1
Query: 298 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQ 477
VK + S FQ L AG +L VV F+ CGPC I P F S+S KY +FLEVDV
Sbjct: 2 VKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDD 61
Query: 478 CQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQ 603
CQ A+ + PTF FF+ ++ ++ GA+ LE I +
Sbjct: 62 CQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
>gi|42516570|ref|NP_115619.4| thioredoxin domain-containing 2 [Homo
sapiens]
Length = 486
Score = 73.9 bits (180), Expect = 2e-13
Identities = 39/101 (38%), Positives = 55/101 (54%)
Frame = +1
Query: 298 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQ 477
VK + S DF+ L AG RL V F+ CGPC I P F ++S K+ VFLEVD
Sbjct: 383 VKVILSKEDFEASLKEAGERLVAVDFSATWCGPCRTIRPFFHALSVKHEDVVFLEVDADN 442
Query: 478 CQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIK 600
C+ I PTF F++ + ++D+ GA L+EK++
Sbjct: 443 CEEVVRECAIMCVPTFQFYKKEEKVDELCGA----LKEKLE 479
>gi|51510891|ref|NP_001003936.1| thioredoxin domain containing 8
[Homo sapiens]
Length = 115
Score = 65.1 bits (157), Expect = 9e-11
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +1
Query: 322 DFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATN 501
+F+ L+ AG +LAVV+F+ + CGPC R+ P F +MS KY F VDV+ A T
Sbjct: 10 EFKTFLTAAGHKLAVVQFSSKRCGPCKRMFPVFHAMSVKYQNVFFANVDVNNSPELAETC 69
Query: 502 NISATPTFLFFRNKVRI 552
+I PTF F+ ++
Sbjct: 70 HIKTIPTFQMFKKSQKV 86
>gi|5730104|ref|NP_006532.1| thioredoxin-like [Homo sapiens]
Length = 335
Score = 58.9 bits (141), Expect = 6e-09
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = +1
Query: 289 MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD 468
+ V+ VGS F+ L L VV F C ++ + ++ + PQ F++++
Sbjct: 10 VAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLE 69
Query: 469 VHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLEND---PGSNE 633
+ IS+ PTFLFF+N +ID+ GA A L +K+++H + P +NE
Sbjct: 70 AEGVPEVSEKYEISSVPTFLFFKNSQKIDRLDGAHAPELTKKVQRHASSGSFLPSANE 127
>gi|21361837|ref|NP_065095.2| thioredoxin family Trp26 [Homo sapiens]
Length = 211
Score = 57.4 bits (137), Expect = 2e-08
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Frame = +1
Query: 694 ECLNESDEHGFDNCL-----RKDMT-FLESDCDEQLLITVAFNQPVKLYSMKFQGPDNGQ 855
+CLNES E R D + F+ESD DE+LL + F VKL + G D+
Sbjct: 41 QCLNESREGSGRGVFKPWEERTDRSKFVESDADEELLFNIPFTGNVKLKGIIIMGEDDDS 100
Query: 856 GPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQNVNSVTIFVQ 1035
P ++++ N+P+ M F++ ER EP Q L D+ + + +F NV ++I +
Sbjct: 101 HPSEMRLYKNIPQ-MSFDDTER-EPDQTFSLNR-DLTGELEYATKISRFSNVYHLSIHIS 157
Query: 1036 SNQGEEENTGIHI 1074
N G + +I
Sbjct: 158 KNFGADTTKVFYI 170
>gi|42794775|ref|NP_071368.3| thioredoxin domain containing 5
isoform 2 [Homo sapiens]
Length = 389
Score = 49.7 bits (117), Expect = 4e-06
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 23/183 (12%)
Frame = +1
Query: 283 LRMVGVKPVGSDPDFQP-----------ELSGAGSRLAV------VKFTMRGCGPCLRIA 411
L+ + +PV +P+ +P ELS + L V +KF CG C +A
Sbjct: 122 LQTLNEEPVTPEPEVEPPSAPELKQGLYELSASNFELHVAQGDHFIKFFAPWCGHCKALA 181
Query: 412 PAFSSMSN--KYPQAVFL-EVDVHQCQGTAATNNISATPTFLFFRNKVRIDQYQG-ADAV 579
P + ++ ++ + V + +VD Q + N + PT L+FR+ ++DQY+G D
Sbjct: 182 PTWEQLALGLEHSETVKIGKVDCTQHYELCSGNQVRGYPTLLWFRDGKKVDQYKGKRDLE 241
Query: 580 GLEEKIKQHLENDPGSNEDTDIPK--GYMDLMPFINKAGCECLNESDEHGFDNCLRKDMT 753
L E ++ L+ +T P + P +K L E++ FD+ + + +T
Sbjct: 242 SLREYVESQLQRTETGATETVTPSEAPVLAAEPEADKGTVLALTENN---FDDTIAEGIT 298
Query: 754 FLE 762
F++
Sbjct: 299 FIK 301
Score = 33.9 bits (76), Expect = 0.22
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +1
Query: 358 LAVVKFTMRGCGPCLRIAPAFSSMSNK-YPQAV---FLEVDVHQCQGTAATNNISATPTF 525
+ +KF CG C +AP + +S K +P EVD + + ++ PT
Sbjct: 297 ITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTL 356
Query: 526 LFFRNKVRIDQYQG 567
L FR ++ ++ G
Sbjct: 357 LLFRGGKKVSEHSG 370
Score = 33.1 bits (74), Expect = 0.38
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Frame = +1
Query: 388 CGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISAT-----PTFLFFRNKVRI 552
CG C R+ P ++ + +KY +V V + TA ++ SA PT F+
Sbjct: 46 CGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGVRGYPTLKLFKPGQEA 105
Query: 553 DQYQG-ADAVGLEEKIKQHLENDPGSNE 633
+YQG D LE + Q L +P + E
Sbjct: 106 VKYQGPRDFQTLENWMLQTLNEEPVTPE 133
>gi|42794771|ref|NP_110437.2| thioredoxin domain containing 5
isoform 1 [Homo sapiens]
Length = 432
Score = 49.7 bits (117), Expect = 4e-06
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 23/183 (12%)
Frame = +1
Query: 283 LRMVGVKPVGSDPDFQP-----------ELSGAGSRLAV------VKFTMRGCGPCLRIA 411
L+ + +PV +P+ +P ELS + L V +KF CG C +A
Sbjct: 165 LQTLNEEPVTPEPEVEPPSAPELKQGLYELSASNFELHVAQGDHFIKFFAPWCGHCKALA 224
Query: 412 PAFSSMSN--KYPQAVFL-EVDVHQCQGTAATNNISATPTFLFFRNKVRIDQYQG-ADAV 579
P + ++ ++ + V + +VD Q + N + PT L+FR+ ++DQY+G D
Sbjct: 225 PTWEQLALGLEHSETVKIGKVDCTQHYELCSGNQVRGYPTLLWFRDGKKVDQYKGKRDLE 284
Query: 580 GLEEKIKQHLENDPGSNEDTDIPK--GYMDLMPFINKAGCECLNESDEHGFDNCLRKDMT 753
L E ++ L+ +T P + P +K L E++ FD+ + + +T
Sbjct: 285 SLREYVESQLQRTETGATETVTPSEAPVLAAEPEADKGTVLALTENN---FDDTIAEGIT 341
Query: 754 FLE 762
F++
Sbjct: 342 FIK 344
Score = 34.7 bits (78), Expect = 0.13
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
Frame = +1
Query: 343 GAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISAT-- 516
G S V F CG C R+ P ++ + +KY +V V + TA ++ SA
Sbjct: 74 GIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTAHSDVCSAQGV 133
Query: 517 ---PTFLFFRNKVRIDQYQG-ADAVGLEEKIKQHLENDPGSNE 633
PT F+ +YQG D LE + Q L +P + E
Sbjct: 134 RGYPTLKLFKPGQEAVKYQGPRDFQTLENWMLQTLNEEPVTPE 176
Score = 33.9 bits (76), Expect = 0.22
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +1
Query: 358 LAVVKFTMRGCGPCLRIAPAFSSMSNK-YPQAV---FLEVDVHQCQGTAATNNISATPTF 525
+ +KF CG C +AP + +S K +P EVD + + ++ PT
Sbjct: 340 ITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTL 399
Query: 526 LFFRNKVRIDQYQG 567
L FR ++ ++ G
Sbjct: 400 LLFRGGKKVSEHSG 413
>gi|21361403|ref|NP_036605.2| thioredoxin 2 precursor [Homo sapiens]
Length = 166
Score = 44.3 bits (103), Expect = 2e-04
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Frame = +1
Query: 211 PVPSRVVFSFSFETGGVAATLPGSLRMVGVKPVG-------SDPDFQPELSGAGSRLAVV 369
P+ SR + + GG+ T P R + + PDFQ + + + + VV
Sbjct: 26 PLTSRALQTPQCSPGGLTVT-PNPARTIYTTRISLTTFNIQDGPDFQDRVVNSETPV-VV 83
Query: 370 KFTMRGCGPCLRIAPAFSSM-SNKYPQAVFLEVDVHQCQGTAATNNISATPTFLFFRNKV 546
F + CGPC + P M + ++ + V +VD+ A +SA PT L +N
Sbjct: 84 DFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAMKNGD 143
Query: 547 RIDQYQG 567
+D++ G
Sbjct: 144 VVDKFVG 150
>gi|21361657|ref|NP_005304.3| glucose regulated protein, 58kDa [Homo
sapiens]
Length = 505
Score = 40.4 bits (93), Expect = 0.002
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = +1
Query: 313 SDPDFQPELSGAGSR-LAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFL-EVDVHQCQG 486
+D +F+ +S GS L +V+F CG C R+AP + + + + V L +VD
Sbjct: 31 TDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANTN 90
Query: 487 TAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPG 624
T +S PT FR+ Y G + I HL+ G
Sbjct: 91 TCNKYGVSGYPTLKIFRDGEEAGAYDGPRTA---DGIVSHLKKQAG 133
Database: RefSeq (Homo Sapiens/Amino Acid)
Posted date: Mar 18, 2005 8:02 PM
Number of letters in database: 14,641,209
Number of sequences in database: 28,818
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 14,641,209
effective HSP length: 103
effective length of database: 11,672,955
effective search space used: 3175043760
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeq (Mouse) database
Query= 20050322C-005468 (20050322C-005468) 20050322C-005468
(1128 letters)
Database: RefSeq (Mus Musculus/Amino Acid)
26,301 sequences; 12,533,744 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|31543902|ref|NP_058072.2| thioredoxin-like 1 [Mus musculus] 525 e-149
Alignment gi|6755911|ref|NP_035790.1| thioredoxin 1 [Mus musculus] 85 7e-17
Alignment gi|23943824|ref|NP_705739.1| thioredoxin domain containing 2 (sp... 72 8e-13
Alignment gi|27229039|ref|NP_080408.2| thioredoxin domain containing 8 [Mu... 65 6e-11
Alignment gi|31981269|ref|NP_075629.2| thioredoxin-like 2 [Mus musculus] 59 4e-09
Alignment gi|28076883|ref|NP_079687.2| thioredoxin family Trp26 [Mus muscu... 58 9e-09
Alignment gi|9903609|ref|NP_064297.1| thioredoxin 2 [Mus musculus] 43 3e-04
Alignment gi|45598381|ref|NP_663342.2| thioredoxin domain containing 5 [Mu... 42 0.001
Alignment gi|6679687|ref|NP_031978.1| glucose regulated protein [Mus muscu... 41 0.002
Alignment gi|19072792|ref|NP_083848.1| thioredoxin domain containing 4 [Mu... 33 0.32
>gi|31543902|ref|NP_058072.2| thioredoxin-like 1 [Mus musculus]
Length = 289
Score = 525 bits (1353), Expect = e-149
Identities = 256/267 (95%), Positives = 259/267 (97%)
Frame = +1
Query: 289 MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD 468
MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD
Sbjct: 1 MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD 60
Query: 469 VHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPGSNEDTDIP 648
VHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPGSNED DIP
Sbjct: 61 VHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPGSNEDADIP 120
Query: 649 KGYMDLMPFINKAGCECLNESDEHGFDNCLRKDMTFLESDCDEQLLITVAFNQPVKLYSM 828
KGYMDLMPFINKAGCECLNESDEHGFDNCLRKDM+FLESDCDEQLLITVAFNQPVKLYSM
Sbjct: 121 KGYMDLMPFINKAGCECLNESDEHGFDNCLRKDMSFLESDCDEQLLITVAFNQPVKLYSM 180
Query: 829 KFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQN 1008
KFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQN
Sbjct: 181 KFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQN 240
Query: 1009 VNSVTIFVQSNQGEEENTGIHILLLLG 1089
VNSVT+FVQSNQGEEE T I +G
Sbjct: 241 VNSVTLFVQSNQGEEETTRISYFTFIG 267
Score = 29.6 bits (65), Expect = 3.6
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3
Query: 1062 RNSYFTFIGTPVQA 1103
R SYFTFIGTPVQA
Sbjct: 259 RISYFTFIGTPVQA 272
>gi|6755911|ref|NP_035790.1| thioredoxin 1 [Mus musculus]
Length = 105
Score = 85.1 bits (209), Expect = 7e-17
Identities = 42/103 (40%), Positives = 58/103 (56%)
Frame = +1
Query: 298 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQ 477
VK + S FQ L+ AG +L VV F+ CGPC I P F S+ +KY VFLEVDV
Sbjct: 2 VKLIESKEAFQEALAAAGDKLVVVDFSATWCGPCKMIKPFFHSLCDKYSNVVFLEVDVDD 61
Query: 478 CQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQH 606
CQ AA + PTF F++ ++ ++ GA+ LE I ++
Sbjct: 62 CQDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKLEASITEY 104
>gi|23943824|ref|NP_705739.1| thioredoxin domain containing 2
(spermatozoa) [Mus musculus]
Length = 462
Score = 71.6 bits (174), Expect = 8e-13
Identities = 34/102 (33%), Positives = 53/102 (51%)
Frame = +1
Query: 298 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQ 477
V+ + +F+ L AG +L V F+ CGPC + P F S+S K+ +FLEVD
Sbjct: 359 VRVIKDKEEFEEVLKDAGEKLVAVDFSAAWCGPCRMMKPLFHSLSLKHEDVIFLEVDTED 418
Query: 478 CQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQ 603
C+ I PTF F++N+ ++ ++ GA LE I +
Sbjct: 419 CEQLVQDCEIFHLPTFQFYKNEEKVGEFSGALVGKLERSISE 460
>gi|27229039|ref|NP_080408.2| thioredoxin domain containing 8 [Mus
musculus]
Length = 153
Score = 65.5 bits (158), Expect = 6e-11
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 22/130 (16%)
Frame = +1
Query: 280 SLRMVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFL 459
S ++ VK + + + + S AG++L VV+F+ + CGPC IAP F +MS KY F
Sbjct: 22 SQMLIMVKRIKNMSELKELFSDAGNKLVVVEFSAKWCGPCKTIAPVFQAMSLKYQNVTFA 81
Query: 460 EVDVHQCQGTAATNNISATPTFLFFRNKVRIDQY----------------------QGAD 573
+VDV + A +I+ PTF F+ ++ + GAD
Sbjct: 82 QVDVDSSKELAEHCDITMLPTFQMFKYTQKVTPFSRLKRVLCCLRSGPKSKMIFECHGAD 141
Query: 574 AVGLEEKIKQ 603
A LE+KI++
Sbjct: 142 AKQLEKKIQE 151
>gi|31981269|ref|NP_075629.2| thioredoxin-like 2 [Mus musculus]
Length = 337
Score = 59.3 bits (142), Expect = 4e-09
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Frame = +1
Query: 292 VGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDV 471
V V VGS F+ L L VV F C+++ + ++ ++P F++++
Sbjct: 13 VAVVEVGSAQQFEELLRLKTKSLLVVHFWAPWAPQCVQMNDVMAELAKEHPHVSFVKLEA 72
Query: 472 HQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLEN---DPGSNE 633
+ IS+ PTFLFF+N ++D+ GA A L +K+++H+ + P +NE
Sbjct: 73 EAVPEVSEKYEISSVPTFLFFKNSQKVDRLDGAHAPELTKKVQRHVSSGAFPPSTNE 129
>gi|28076883|ref|NP_079687.2| thioredoxin family Trp26 [Mus musculus]
Length = 222
Score = 58.2 bits (139), Expect = 9e-09
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Frame = +1
Query: 694 ECLNESDEHGFDNCL-----RKDMT-FLESDCDEQLLITVAFNQPVKLYSMKFQGPDNGQ 855
+CLNES E R D + F+ESD DE+LL + F VKL + G D+
Sbjct: 41 QCLNESREGSGRGVFKPWEERTDRSKFVESDADEELLFNIPFTGNVKLKGVIIMGEDDDS 100
Query: 856 GPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQNVNSVTIFVQ 1035
P ++++ N+P+ M F++ ER EP Q L DI + + +F NV ++I +
Sbjct: 101 HPSEMRLYKNIPQ-MSFDDTER-EPEQTFSLNR-DITGELEYATKISRFSNVYHLSIHIS 157
Query: 1036 SNQGEEENTGIHILLLLGLR 1095
N G + + +GLR
Sbjct: 158 KNFGADTTK----IFYIGLR 173
>gi|9903609|ref|NP_064297.1| thioredoxin 2 [Mus musculus]
Length = 166
Score = 43.1 bits (100), Expect = 3e-04
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +1
Query: 307 VGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSM-SNKYPQAVFLEVDVHQCQ 483
V PDFQ + + + + VV F + CGPC + P M + ++ + V +VD+
Sbjct: 64 VQDGPDFQDRVVNSETPV-VVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHT 122
Query: 484 GTAATNNISATPTFLFFRNKVRIDQYQG 567
A +SA PT L +N +D++ G
Sbjct: 123 DLAIEYEVSAVPTVLAIKNGDVVDKFVG 150
>gi|45598381|ref|NP_663342.2| thioredoxin domain containing 5 [Mus
musculus]
Length = 417
Score = 41.6 bits (96), Expect = 0.001
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 24/184 (13%)
Frame = +1
Query: 283 LRMVGVKPVGSDPDFQP-----------ELSGAGSRLAV------VKFTMRGCGPCLRIA 411
L+ + +P +P+ +P ELS L V +KF CG C +A
Sbjct: 151 LQTLNEEPATPEPEAEPPRALELKQGLYELSANNFELHVSQGNHFIKFFAPWCGHCKALA 210
Query: 412 PAFSSMSN--KYPQAVFL-EVDVHQCQGTAATNNISATPTFLFFRNKVRIDQYQG-ADAV 579
P + ++ ++ + V + +VD Q + + + PT L+FR+ ++DQY+G D
Sbjct: 211 PTWEQLALGLEHSETVKIGKVDCTQHYAVCSEHQVRGYPTLLWFRDGKKVDQYKGKRDLE 270
Query: 580 GLEEKI---KQHLENDPGSNEDTDIPKGYMDLMPFINKAGCECLNESDEHGFDNCLRKDM 750
L + + +Q E P + E ++ P M P +K L E F++ + + +
Sbjct: 271 SLRDYVQSQQQGSEAAPETVEPSEAP--VMAAEPTGDKGTVLALTEK---SFEDTIAQGI 325
Query: 751 TFLE 762
TF++
Sbjct: 326 TFVK 329
Score = 39.3 bits (90), Expect = 0.004
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Frame = +1
Query: 343 GAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISAT-- 516
G S V F CG C R+ P ++ + +KY +V V + TA ++ SA
Sbjct: 60 GIQSAAHFVMFFAPWCGHCQRLQPTWNDLGDKYNSMEDAKVYVAKVDCTADSDVCSAQGV 119
Query: 517 ---PTFLFFRNKVRIDQYQG-ADAVGLEEKIKQHLENDPGSNEDTDIPKGYMDL 666
PT FF+ +YQG D LE + Q L +P + E P ++L
Sbjct: 120 RGYPTLKFFKPGQEAVKYQGPRDFETLENWMLQTLNEEPATPEPEAEPPRALEL 173
Score = 35.8 bits (81), Expect = 0.050
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +1
Query: 358 LAVVKFTMRGCGPCLRIAPAFSSMSNK-YP---QAVFLEVDVHQCQGTAATNNISATPTF 525
+ VKF CG C +AP + +S K +P EVD + + ++ PT
Sbjct: 325 ITFVKFYAPWCGHCKNLAPTWEELSKKEFPGLSDVTIAEVDCTAERNVCSKYSVRGYPTL 384
Query: 526 LFFRNKVRIDQYQG 567
L FR ++ ++ G
Sbjct: 385 LLFRGGEKVGEHNG 398
>gi|6679687|ref|NP_031978.1| glucose regulated protein [Mus
musculus]
Length = 504
Score = 40.8 bits (94), Expect = 0.002
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Frame = +1
Query: 313 SDPDFQPELSGAGSR-LAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGT 489
+D +F+ +S GS L +V+F CG C R+AP + + + + +VD T
Sbjct: 31 TDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKIVPLAKVDCTANTNT 90
Query: 490 AATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPG 624
+S PT FR Y G + I HL+ G
Sbjct: 91 CNKYGVSGYPTLKIFRAGEEAGAYDGPRTA---DGIVSHLKKQAG 132
>gi|19072792|ref|NP_083848.1| thioredoxin domain containing 4 [Mus
musculus]
Length = 406
Score = 33.1 bits (74), Expect = 0.32
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Frame = +1
Query: 358 LAVVKFTMRGCGPCLRIAPAFSSMSN----KYP---QAVFLEVDVHQCQGTAATNNISAT 516
+A+V F C + P F S+ +YP Q VF VD Q A IS
Sbjct: 48 VALVNFYADWCRFSQMLHPIFEEASDVIKEEYPDKNQVVFARVDCDQHSDIAQRYRISKY 107
Query: 517 PTFLFFRNKVRID-QYQGADAV-GLEEKIKQHLEN 615
PT FRN + + +Y+G +V L + I+Q N
Sbjct: 108 PTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSN 142
Database: RefSeq (Mus Musculus/Amino Acid)
Posted date: Mar 11, 2005 8:00 PM
Number of letters in database: 12,533,744
Number of sequences in database: 26,301
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 12,533,744
effective HSP length: 102
effective length of database: 9,851,042
effective search space used: 2689334466
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)