Search to RefSeq (Human) database
Query= 20050322S-034384 (20050322S-034384) 20050322S-034384
(1164 letters)
Database: RefSeq (Homo Sapiens/Amino Acid)
28,829 sequences; 14,643,787 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|20544145|ref|NP_620693.1| casein kinase 1, delta isoform 2 [H... 564 e-161
Alignment gi|20149530|ref|NP_001884.2| casein kinase 1, delta isoform 1 [H... 564 e-161
Alignment gi|23199991|ref|NP_689407.1| casein kinase 1 epsilon [Homo sapiens] 556 e-158
Alignment gi|4503093|ref|NP_001885.1| casein kinase 1 epsilon [Homo sapiens] 556 e-158
Alignment gi|19923746|ref|NP_001883.3| casein kinase 1, alpha 1 [Homo sapi... 438 e-123
Alignment gi|21624639|ref|NP_660204.1| casein kinase 1, alpha 1-like [Homo... 421 e-118
Alignment gi|4758080|ref|NP_004375.1| casein kinase 1, gamma 3 [Homo sapiens] 331 5e-91
Alignment gi|11545751|ref|NP_071331.1| casein kinase 1, gamma 1 isoform S ... 331 7e-91
Alignment gi|58652156|ref|NP_001011664.1| casein kinase 1, gamma 1 isoform... 331 7e-91
Alignment gi|21314778|ref|NP_001310.2| casein kinase 1, gamma 2 [Homo sapi... 330 9e-91
>gi|20544145|ref|NP_620693.1| casein kinase 1, delta isoform 2 [Homo
sapiens]
Length = 409
Score = 564 bits (1454), Expect = e-161
Identities = 293/349 (83%), Positives = 302/349 (86%), Gaps = 10/349 (2%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ
Sbjct: 1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLXSLPWQGLXAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNL SLPWQGL AA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHRRA-SPTITS*MELLNFGAVR- 1002
+GYPSEFATYLNFCRSLRFDDKPDYSYL+QLFRNLFHR+ S +L FGA R
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRA 300
Query: 1003 EPTTQTEPRDQRSAEKFRTHPP--GLPQGLAAEGDQRG------PPPLT 1125
+ E RD+ + +P GLP A G RG P PLT
Sbjct: 301 ADDAERERRDREERLRHSRNPATRGLPS--TASGRLRGTQEVAPPTPLT 347
>gi|20149530|ref|NP_001884.2| casein kinase 1, delta isoform 1 [Homo
sapiens]
Length = 415
Score = 564 bits (1454), Expect = e-161
Identities = 293/349 (83%), Positives = 302/349 (86%), Gaps = 10/349 (2%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ
Sbjct: 1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLXSLPWQGLXAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNL SLPWQGL AA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHRRA-SPTITS*MELLNFGAVR- 1002
+GYPSEFATYLNFCRSLRFDDKPDYSYL+QLFRNLFHR+ S +L FGA R
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRA 300
Query: 1003 EPTTQTEPRDQRSAEKFRTHPP--GLPQGLAAEGDQRG------PPPLT 1125
+ E RD+ + +P GLP A G RG P PLT
Sbjct: 301 ADDAERERRDREERLRHSRNPATRGLPS--TASGRLRGTQEVAPPTPLT 347
>gi|23199991|ref|NP_689407.1| casein kinase 1 epsilon [Homo sapiens]
Length = 416
Score = 556 bits (1433), Expect = e-158
Identities = 280/338 (82%), Positives = 293/338 (86%), Gaps = 10/338 (2%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLXSLPWQGLXAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNL SLPWQGL AA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHRRA-SPTITS*MELLNFGAVRE 1005
+GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR+ S +L FGA R
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 300
Query: 1006 PTTQTEPRDQRSAEK---------FRTHPPGLPQGLAA 1092
P R + E+ R PPG P G A
Sbjct: 301 PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATA 338
>gi|4503093|ref|NP_001885.1| casein kinase 1 epsilon [Homo sapiens]
Length = 416
Score = 556 bits (1433), Expect = e-158
Identities = 280/338 (82%), Positives = 293/338 (86%), Gaps = 10/338 (2%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLXSLPWQGLXAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNL SLPWQGL AA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHRRA-SPTITS*MELLNFGAVRE 1005
+GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR+ S +L FGA R
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 300
Query: 1006 PTTQTEPRDQRSAEK---------FRTHPPGLPQGLAA 1092
P R + E+ R PPG P G A
Sbjct: 301 PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATA 338
>gi|19923746|ref|NP_001883.3| casein kinase 1, alpha 1 [Homo
sapiens]
Length = 337
Score = 438 bits (1127), Expect = e-123
Identities = 207/276 (75%), Positives = 243/276 (88%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 291
E VG +Y+L RKIGSGSFGDIYL +I GEEVA+KLE K +HPQL ESK+YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
KNFIHRD+KPDNFLMG+G+ N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189
Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLXSLPWQGLXAAIQRQKYERISEKKMSTPIEVLX 831
IN HLGIEQSRRDD+ESLGYVLMYFN SLPWQGL AA +++KYE+ISEKKMSTP+EVL
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKKKYEKISEKKMSTPVEVLC 249
Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
+G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285
>gi|21624639|ref|NP_660204.1| casein kinase 1, alpha 1-like [Homo
sapiens]
Length = 337
Score = 421 bits (1083), Expect = e-118
Identities = 199/276 (72%), Positives = 235/276 (85%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 291
EL VG +Y+L RKIGSGSFGD+YLG GEEVA+KLE K KHPQL ESK+Y ++QG
Sbjct: 10 ELVVGGKYKLVRKIGSGSFGDVYLGITTTNGEEVAVKLESQKVKHPQLLYESKLYTILQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
GVGIP + W G E D NV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHMHWYGQEKDNNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
KNF+HRD+KPDNFLMG G+ N +++IDFGLAKKYRD RT QHIPYRE+K+L GT RYAS
Sbjct: 130 KNFLHRDIKPDNFLMGTGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKHLIGTVRYAS 189
Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLXSLPWQGLXAAIQRQKYERISEKKMSTPIEVLX 831
IN HLGIEQSRRDD+ESLGYV MYFN SLPWQGL A ++QKYE+ISEKKMSTP+EVL
Sbjct: 190 INAHLGIEQSRRDDMESLGYVFMYFNRTSLPWQGLKAMTKKQKYEKISEKKMSTPVEVLC 249
Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
+G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEVPDYMYLRQLFRILF 285
>gi|4758080|ref|NP_004375.1| casein kinase 1, gamma 3 [Homo sapiens]
Length = 447
Score = 331 bits (849), Expect = 5e-91
Identities = 168/307 (54%), Positives = 223/307 (72%), Gaps = 2/307 (0%)
Frame = +1
Query: 34 KGDLGPGDPSPSAAGRGRTGLAEAAMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEV 213
K D PS + R + ++ L VG +R+G+KIG G+FG++ LG ++ E V
Sbjct: 10 KSDDRMARPSGRSGHNTRGTGSSSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYV 69
Query: 214 AIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNF 393
AIKLE +K++ PQLH+E + YK + G GIP + + G G YN MV+ELLGPSLEDLF+
Sbjct: 70 AIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDL 129
Query: 394 CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMG--LGKKGNLVYIIDFGLA 567
C R FSLKTVL++A Q+ISR+EY+HSKN I+RDVKP+NFL+G K +++IIDFGLA
Sbjct: 130 CDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPRNKTQQVIHIIDFGLA 189
Query: 568 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLXSLPW 747
K+Y D T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF SLPW
Sbjct: 190 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 249
Query: 748 QGLXAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLF 927
QGL A +++Y++I + K +TPIEVL + +P E ATYL + R L F +KPDY YL++LF
Sbjct: 250 QGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYEYLRKLF 308
Query: 928 RNLFHRR 948
+LF R+
Sbjct: 309 TDLFDRK 315
>gi|11545751|ref|NP_071331.1| casein kinase 1, gamma 1 isoform S
[Homo sapiens]
Length = 393
Score = 331 bits (848), Expect = 7e-91
Identities = 160/290 (55%), Positives = 219/290 (75%), Gaps = 3/290 (1%)
Frame = +1
Query: 88 TGLAEAAMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIES 267
+G + ++ L VG +R+G+KIG G+FG++ LG ++ E VAIKLE +K++ PQLH+E
Sbjct: 29 SGSSSSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEY 88
Query: 268 KIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQM 444
+ YK + G G+P + + G G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q+
Sbjct: 89 RFYKQLGSAGEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQL 148
Query: 445 ISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 618
+SR+EY+HSKN I+RDVKP+NFL+G KK ++++IIDFGLAK+Y D T +HIPYRE+
Sbjct: 149 LSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREH 208
Query: 619 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLXSLPWQGLXAAIQRQKYERISE 798
K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF SLPWQGL A +++Y++I +
Sbjct: 209 KSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGD 268
Query: 799 KKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHRR 948
K +TPIE L + +P E ATYL + R L F +KPDY YL+ LF +LF ++
Sbjct: 269 TKRNTPIEALCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFEKK 318
>gi|58652156|ref|NP_001011664.1| casein kinase 1, gamma 1 isoform L
[Homo sapiens]
Length = 422
Score = 331 bits (848), Expect = 7e-91
Identities = 160/290 (55%), Positives = 219/290 (75%), Gaps = 3/290 (1%)
Frame = +1
Query: 88 TGLAEAAMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIES 267
+G + ++ L VG +R+G+KIG G+FG++ LG ++ E VAIKLE +K++ PQLH+E
Sbjct: 29 SGSSSSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEY 88
Query: 268 KIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQM 444
+ YK + G G+P + + G G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q+
Sbjct: 89 RFYKQLGSAGEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQL 148
Query: 445 ISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 618
+SR+EY+HSKN I+RDVKP+NFL+G KK ++++IIDFGLAK+Y D T +HIPYRE+
Sbjct: 149 LSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREH 208
Query: 619 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLXSLPWQGLXAAIQRQKYERISE 798
K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF SLPWQGL A +++Y++I +
Sbjct: 209 KSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGD 268
Query: 799 KKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHRR 948
K +TPIE L + +P E ATYL + R L F +KPDY YL+ LF +LF ++
Sbjct: 269 TKRNTPIEALCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFEKK 318
>gi|21314778|ref|NP_001310.2| casein kinase 1, gamma 2 [Homo
sapiens]
Length = 415
Score = 330 bits (847), Expect = 9e-91
Identities = 161/300 (53%), Positives = 221/300 (73%), Gaps = 5/300 (1%)
Frame = +1
Query: 61 SPSAAGRGRTGLAEAAME---LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLEC 231
S + GR G+ + L VG +R+G+KIG G+FG++ LG ++ E VAIKLE
Sbjct: 19 SKAGGGRSSHGIRSSGTSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEP 78
Query: 232 VKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFS 411
+K++ PQLH+E + YK + G+P + + G G+YN MV+ELLGPSLEDLF+ C R F+
Sbjct: 79 IKSRAPQLHLEYRFYKQLSATEGVPQVYYFGPCGNYNAMVLELLGPSLEDLFDLCDRTFT 138
Query: 412 LKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG--KKGNLVYIIDFGLAKKYRDA 585
LKTVL++A Q+I+R+EY+H+K+ I+RDVKP+NFL+G K+ + ++IIDFGLAK+Y D
Sbjct: 139 LKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDP 198
Query: 586 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLXSLPWQGLXAA 765
T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF SLPWQGL A
Sbjct: 199 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD 258
Query: 766 IQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+++Y++I + K +TPIEVL + +P E ATYL + R L F +KPDY YL++LF +LF R
Sbjct: 259 TLKERYQKIGDTKRATPIEVLCENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 318
Database: RefSeq (Homo Sapiens/Amino Acid)
Posted date: Apr 1, 2005 10:30 AM
Number of letters in database: 14,643,787
Number of sequences in database: 28,829
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 14,643,787
effective HSP length: 103
effective length of database: 11,674,400
effective search space used: 3315529600
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeq (Mouse) database
Query= 20050322S-034384 (20050322S-034384) 20050322S-034384
(1164 letters)
Database: RefSeq (Mus Musculus/Amino Acid)
26,295 sequences; 12,531,167 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|20544149|ref|NP_620690.1| casein kinase 1, delta isoform 1 [M... 564 e-161
Alignment gi|20544147|ref|NP_082150.1| casein kinase 1, delta isoform 2 [M... 564 e-161
Alignment gi|31542425|ref|NP_038795.3| casein kinase 1 epsilon [Mus musculus] 556 e-159
Alignment gi|22165382|ref|NP_666199.1| casein kinase 1, alpha 1 [Mus muscu... 440 e-124
Alignment gi|27502357|ref|NP_775277.1| casein kinase 1, gamma 1 [Mus muscu... 330 1e-90
Alignment gi|19527224|ref|NP_598763.1| casein kinase 1, gamma 2 [Mus muscu... 315 4e-86
Alignment gi|22779897|ref|NP_690022.1| casein kinase 1, gamma 3 [Mus muscu... 263 2e-70
Alignment gi|21312468|ref|NP_081536.1| vaccinia related kinase 2 [Mus musc... 124 8e-29
Alignment gi|6755985|ref|NP_035835.1| vaccinia related kinase 1 [Mus muscu... 121 9e-28
Alignment gi|51830551|ref|XP_140038.4| similar to KIAA1855 protein [Mus mu... 115 5e-26
>gi|20544149|ref|NP_620690.1| casein kinase 1, delta isoform 1 [Mus
musculus]
Length = 415
Score = 564 bits (1454), Expect = e-161
Identities = 293/349 (83%), Positives = 302/349 (86%), Gaps = 10/349 (2%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ
Sbjct: 1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLXSLPWQGLXAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNL SLPWQGL AA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHRRA-SPTITS*MELLNFGAVR- 1002
+GYPSEFATYLNFCRSLRFDDKPDYSYL+QLFRNLFHR+ S +L FGA R
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRA 300
Query: 1003 EPTTQTEPRDQRSAEKFRTHPP--GLPQGLAAEGDQRG------PPPLT 1125
+ E RD+ + +P GLP A G RG P PLT
Sbjct: 301 ADDAERERRDREERLRHSRNPATRGLPS--TASGRLRGTQEVAPPTPLT 347
>gi|20544147|ref|NP_082150.1| casein kinase 1, delta isoform 2 [Mus
musculus]
Length = 409
Score = 564 bits (1454), Expect = e-161
Identities = 293/349 (83%), Positives = 302/349 (86%), Gaps = 10/349 (2%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ
Sbjct: 1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLXSLPWQGLXAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNL SLPWQGL AA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHRRA-SPTITS*MELLNFGAVR- 1002
+GYPSEFATYLNFCRSLRFDDKPDYSYL+QLFRNLFHR+ S +L FGA R
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRA 300
Query: 1003 EPTTQTEPRDQRSAEKFRTHPP--GLPQGLAAEGDQRG------PPPLT 1125
+ E RD+ + +P GLP A G RG P PLT
Sbjct: 301 ADDAERERRDREERLRHSRNPATRGLPS--TASGRLRGTQEVAPPTPLT 347
>gi|31542425|ref|NP_038795.3| casein kinase 1 epsilon [Mus musculus]
Length = 416
Score = 556 bits (1433), Expect = e-159
Identities = 280/338 (82%), Positives = 293/338 (86%), Gaps = 10/338 (2%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 288
MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIKLECVKTKHPQLHIESK YKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLXSLPWQGLXAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNL SLPWQGL AA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHRRA-SPTITS*MELLNFGAVRE 1005
+GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR+ S +L FGA R
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARN 300
Query: 1006 PTTQTEPRDQRSAEK---------FRTHPPGLPQGLAA 1092
P R + E+ R PPG P G A
Sbjct: 301 PEDVDRERREHEREERMGQLRGSATRALPPGPPTGATA 338
>gi|22165382|ref|NP_666199.1| casein kinase 1, alpha 1 [Mus
musculus]
Length = 325
Score = 440 bits (1131), Expect = e-124
Identities = 208/276 (75%), Positives = 243/276 (88%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG 291
E VG +Y+L RKIGSGSFGDIYL +I GEEVA+KLE K +HPQL ESK+YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
KNFIHRD+KPDNFLMG+G+ N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189
Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLXSLPWQGLXAAIQRQKYERISEKKMSTPIEVLX 831
IN HLGIEQSRRDD+ESLGYVLMYFN SLPWQGL AA ++QKYE+ISEKKMSTP+EVL
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249
Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
+G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285
>gi|27502357|ref|NP_775277.1| casein kinase 1, gamma 1 [Mus
musculus]
Length = 459
Score = 330 bits (845), Expect = 1e-90
Identities = 159/279 (56%), Positives = 213/279 (76%), Gaps = 3/279 (1%)
Frame = +1
Query: 121 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMM-QGGV 297
VG +R+G+KIG G+FG++ LG ++ E VAIKLE +K++ PQLH+E + YK + G
Sbjct: 40 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAGE 99
Query: 298 GIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN 477
G+P + + G G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q++SR+EY+HSKN
Sbjct: 100 GLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKN 159
Query: 478 FIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
I+RDVKP+NFL+G KK ++++IIDFGLAK+Y D T +HIPYRE+K+LTGTARY S
Sbjct: 160 LIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYVDPETKKHIPYREHKSLTGTARYMS 219
Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLXSLPWQGLXAAIQRQKYERISEKKMSTPIEVLX 831
INTHLG EQSRRDDLE+LG++ MYF SLPWQGL A +++Y++I + K +TPIE L
Sbjct: 220 INTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEALC 279
Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHRR 948
+ +P E ATYL + R L F +KPDY YL+ LF +LF R+
Sbjct: 280 ENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFERK 318
>gi|19527224|ref|NP_598763.1| casein kinase 1, gamma 2 [Mus musculus]
Length = 442
Score = 315 bits (806), Expect = 4e-86
Identities = 164/337 (48%), Positives = 224/337 (66%), Gaps = 33/337 (9%)
Frame = +1
Query: 34 KGDLGPGDP-SPSAAGRGRTGLAEAAME---LRVGNRYRLGRKIGSGSFGDIYLGTDIAA 201
KG+L G S + R G+ + L VG +R+G+KIG G+FG++ LG ++
Sbjct: 9 KGELEEGRRMSKTGTSRSNHGVRSSGTSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYT 68
Query: 202 GEEVAIKLECVKTKHPQLHIESKIYKMMQG---------------------------GVG 300
E VAIKLE +K++ PQLH+E + YK + G
Sbjct: 69 NEYVAIKLEPIKSRAPQLHLEYRFYKQLSTTGEADSGTGPALLGQQWLRTPSMDVSFAEG 128
Query: 301 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF 480
+P + + G G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q+I+R+EY+H+K+
Sbjct: 129 VPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSL 188
Query: 481 IHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 654
I+RDVKP+NFL+G K+ + ++IIDFGLAK+Y D T +HIPYRE+K+LTGTARY SI
Sbjct: 189 IYRDVKPENFLVGRPGSKRQHSIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSI 248
Query: 655 NTHLGIEQSRRDDLESLGYVLMYFNLXSLPWQGLXAAIQRQKYERISEKKMSTPIEVLXQ 834
NTHLG EQSRRDDLE+LG++ MYF SLPWQGL A +++Y++I + K +TPIEVL +
Sbjct: 249 NTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCE 308
Query: 835 GYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+P E ATYL + R L F +KPDY YL++LF +LF R
Sbjct: 309 SFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 345
>gi|22779897|ref|NP_690022.1| casein kinase 1, gamma 3 [Mus
musculus]
Length = 311
Score = 263 bits (672), Expect = 2e-70
Identities = 127/203 (62%), Positives = 162/203 (79%), Gaps = 2/203 (0%)
Frame = +1
Query: 346 MVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL- 522
MV+ELLGPSLEDLF+ C R FSLKTVL++A Q+ISR+EY+HSKN I+RDVKP+NFL+G
Sbjct: 1 MVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRP 60
Query: 523 -GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLE 699
K +++IIDFGLAK+Y D T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE
Sbjct: 61 GNKAQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLE 120
Query: 700 SLGYVLMYFNLXSLPWQGLXAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRS 879
+LG++ MYF SLPWQGL A +++Y++I + K +TPIEVL + +P E ATYL + R
Sbjct: 121 ALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEEMATYLRYVRR 180
Query: 880 LRFDDKPDYSYLKQLFRNLFHRR 948
L F +KPDY YL++LF +LF R+
Sbjct: 181 LDFFEKPDYDYLRKLFTDLFDRK 203
>gi|21312468|ref|NP_081536.1| vaccinia related kinase 2 [Mus
musculus]
Length = 503
Score = 124 bits (312), Expect = 8e-29
Identities = 95/291 (32%), Positives = 134/291 (46%), Gaps = 24/291 (8%)
Frame = +1
Query: 124 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVA---IKLECVKTKHPQLHIESKIY------ 276
GNR+ LG+ IGSG FG IYL + A IKLE ++ L E K Y
Sbjct: 26 GNRWALGKMIGSGGFGLIYLAFPTNKPNKDARHVIKLEY--QENGPLFSELKFYQRAAKR 83
Query: 277 ----KMMQGG----VGIPTIRWCGAEG----DYNVMVMELLGPSLEDLFNFCSRKFSLKT 420
K +Q +GIP G Y MVME LG L+ L + + F T
Sbjct: 84 ECIQKWIQQRKLDYLGIPVFYGFGLTDFKGRSYRFMVMERLGIDLQKLLDQ-NGGFKKLT 142
Query: 421 VLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH 600
VL L +M+ +EYIH ++H D+K N L+ VY+ D+GL+ +Y H+
Sbjct: 143 VLQLGIRMLDVLEYIHENEYVHGDIKAANLLLDFTNPDR-VYLADYGLSYRYCPNGNHKQ 201
Query: 601 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLXSLPWQGLX---AAIQ 771
K GT + S++ H G+ SRR D+E LGY ++++ LPW+ A+Q
Sbjct: 202 YQEDPRKGHNGTIEFTSLDAHKGVPPSRRSDVEILGYCMLHWLFGKLPWEAKLDDPVAVQ 261
Query: 772 RQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQL 924
K + E S SE YL + +L +DDKPDY LK++
Sbjct: 262 TAKTNLLDELPESVLKWAPSGSSCSELVKYLMYVHNLAYDDKPDYQKLKKI 312
>gi|6755985|ref|NP_035835.1| vaccinia related kinase 1 [Mus musculus]
Length = 440
Score = 121 bits (303), Expect = 9e-28
Identities = 98/365 (26%), Positives = 158/365 (43%), Gaps = 38/365 (10%)
Frame = +1
Query: 58 PSPSAAGRGRTGLAEA--AMELRVGN--------RYRLGRKIGSGSFGDIYLGTDIAAGE 207
P AA GR G A+ A + G ++LG IG G FG IYL D + +
Sbjct: 2 PRVKAAQAGRPGPAKRRLAEQFAAGEVLTDMSRKEWKLGLPIGQGGFGCIYLA-DTNSSK 60
Query: 208 EVAIKLECVKTKHPQ----LHIESKIYK------MMQGGVGIPTIRWCGAEG-------- 333
V CV P L E K Y+ +Q + +++ G
Sbjct: 61 PVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTHKLKYLGVPKYWGSGLHD 120
Query: 334 ----DYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKP 501
Y M+M+ G L+ ++ +++FS KTVL L+ +++ +EYIH ++H D+K
Sbjct: 121 KNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKA 180
Query: 502 DNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQS 681
N L+ K + VY++D+GLA +Y H+ + GT + SI+ H G+ S
Sbjct: 181 SNLLLS-HKNPDQVYLVDYGLAYRYCPDGVHKEYKEDPKRCHDGTLEFTSIDAHKGVAPS 239
Query: 682 RRDDLESLGYVLMYFNLXSLPWQGLXAAIQRQKYERISEKKMSTPIEVLXQ------GYP 843
RR DLE LGY ++ + LPW+ ++ Y R S+ + + L + P
Sbjct: 240 RRGDLEILGYCMIQWLSGCLPWED---NLKDPNYVRDSKIRYRDNVAALMEKCFPEKNKP 296
Query: 844 SEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHRRASPTITS*MELLNFGAVREPTTQTE 1023
E A Y+ + L + +KP Y L+ + S L+F AV + +T
Sbjct: 297 GEIAKYMESVKLLEYTEKPLYQNLRDILLQGLKAIGSKDDGK----LDFSAVENGSVKTR 352
Query: 1024 PRDQR 1038
P ++
Sbjct: 353 PASKK 357
>gi|51830551|ref|XP_140038.4| similar to KIAA1855 protein [Mus
musculus]
Length = 978
Score = 115 bits (288), Expect = 5e-26
Identities = 85/242 (35%), Positives = 114/242 (47%), Gaps = 32/242 (13%)
Frame = +1
Query: 319 CGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKNFIHRDV 495
CG +N +VM+L G +L DL R F+L T L L Q++ IE IHS F+HRD+
Sbjct: 23 CGRNEKFNYVVMQLQGRNLADLRRSQPRGTFTLSTTLRLGKQILESIEAIHSVGFLHRDI 82
Query: 496 KP--------DNFLMG-LGKKGNLVYIIDFGLAKKY-------RDARTHQH------IPY 609
KP NF MG L Y++DFGLA++Y R T H +P
Sbjct: 83 KPFTAAVFPQSNFAMGRLPSTYRKCYMLDFGLARQYTNTTGDVRPVSTTGHRDMVKALPS 142
Query: 610 -----RENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLXSLPWQGLXAAIQ- 771
R GT RYAS+N H E R DDL SL Y+L+ F + LPW+ + Q
Sbjct: 143 LWYGPRNVAGFRGTVRYASVNAHKNREMGRHDDLWSLFYMLVEFAVGQLPWRKIKDKEQV 202
Query: 772 ---RQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFH 942
++KYE +L + PSEF +L+ SL + KPDY + +F N
Sbjct: 203 GMIKEKYEH----------RMLLKHMPSEFHLFLDHIASLDYFTKPDYQLIMSVFENSMK 252
Query: 943 RR 948
R
Sbjct: 253 ER 254
Database: RefSeq (Mus Musculus/Amino Acid)
Posted date: Apr 1, 2005 10:30 AM
Number of letters in database: 12,531,167
Number of sequences in database: 26,295
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
length of database: 12,531,167
effective HSP length: 102
effective length of database: 9,849,077
effective search space used: 2806986945
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)