Animal-Genome cDNA 20060611C-000288


Search to RefSeqBP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611C-000288
         (1119 letters)

Database: RefSeqBP 
           33,508 sequences; 16,112,626 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001030472.1| hypothetical protein LOC533086 [Bos taurus]       415   e-135
Alignment   gi|XP_879080.1| PREDICTED: similar to microsomal NAD+-dependent...   319   e-101
Alignment   gi|XP_878888.1| PREDICTED: similar to microsomal NAD+-dependent...   319   e-101
Alignment   gi|XP_878794.1| PREDICTED: similar to microsomal NAD+-dependent...   319   e-101
Alignment   gi|XP_869667.1| PREDICTED: similar to microsomal NAD+-dependent...   319   e-101
Alignment   gi|XP_878985.1| PREDICTED: similar to microsomal NAD+-dependent...   315   2e-99
Alignment   gi|XP_601132.2| PREDICTED: similar to microsomal NAD+-dependent...   300   1e-95
Alignment   gi|XP_583421.2| PREDICTED: similar to orphan short-chain dehydr...   277   1e-79
Alignment   gi|NP_777158.1| NADP-dependent retinol dehydrogenase/reductase ...   249   8e-76
Alignment   gi|XP_597943.2| PREDICTED: similar to microsomal NAD+-dependent...   272   4e-73

>ref|NP_001030472.1| hypothetical protein LOC533086 [Bos taurus]
          Length = 317

 Score =  415 bits (1067), Expect(2) = e-135
 Identities = 205/260 (78%), Positives = 224/260 (86%)
 Frame = +2

Query: 227  MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
            MW             RW+RERQ+VSHL DK+VFITGCDSGFGN LARQLD+RGLRVLA C
Sbjct: 1    MWLYLAVLLGLYYLLRWFRERQVVSHLQDKFVFITGCDSGFGNQLARQLDLRGLRVLAGC 60

Query: 407  LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
            LTEQGA+QLR QTSDRL+TV+LDVTKTESIAAAT+WVKE VGDRGLWGLVNNAG FH   
Sbjct: 61   LTEQGAEQLRNQTSDRLQTVILDVTKTESIAAATEWVKECVGDRGLWGLVNNAGIFHSHG 120

Query: 587  ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSK 766
              EW+K ET+  TL+VNLIGV EVTLSMLPLV+KAQGRIVNVSSILGR+AFFGAVYS SK
Sbjct: 121  YAEWIKIETYRDTLRVNLIGVIEVTLSMLPLVRKAQGRIVNVSSILGRIAFFGAVYSCSK 180

Query: 767  HGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQ 946
            +GVEAFSD+LR ELQHFGVKVS+VEPGYFRT MTD QK SE MKQ+WKE PAHIK+TYGQ
Sbjct: 181  YGVEAFSDILRRELQHFGVKVSMVEPGYFRTAMTDWQKFSEIMKQIWKETPAHIKETYGQ 240

Query: 947  KFFDAYHDVMKQGLSSCSTN 1006
            KFFDAYHD+MKQGL SCSTN
Sbjct: 241  KFFDAYHDLMKQGLLSCSTN 260



 Score = 84.7 bits (208), Expect(2) = e-135
 Identities = 38/46 (82%), Positives = 41/46 (89%)
 Frame = +3

Query: 981  KGCLVVAQTLNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            +G L  +  LNLVTDCMEHALTSVHPRTRYSAGWDAQFFF+PLSYL
Sbjct: 252  QGLLSCSTNLNLVTDCMEHALTSVHPRTRYSAGWDAQFFFVPLSYL 297


>ref|XP_879080.1| PREDICTED: similar to microsomal NAD+-dependent retinol
           dehydrogenase 4 isoform 5 [Bos taurus]
          Length = 317

 Score =  319 bits (817), Expect(2) = e-101
 Identities = 156/242 (64%), Positives = 188/242 (77%)
 Frame = +2

Query: 227 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
           MW             RWYRERQ+VSHL DK+VFITGCDSGFGNLLARQLD+RGLRVLAAC
Sbjct: 1   MWLYLVVLVGLYYLLRWYRERQVVSHLRDKFVFITGCDSGFGNLLARQLDLRGLRVLAAC 60

Query: 407 LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
           LTE+GA+QLR QTSDRL+TV+LDVTKT+S+AAAT+WVKERVGDRGLWGLVNNAG   P  
Sbjct: 61  LTEKGAEQLRNQTSDRLQTVILDVTKTDSVAAATEWVKERVGDRGLWGLVNNAGISTPTA 120

Query: 587 ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSK 766
             EWL  + ++  L VNL+GV +VTLS+LPLV+KA+GR+VNVSSI+GRVA  G  Y  SK
Sbjct: 121 PNEWLTKQDFMKILDVNLLGVIDVTLSVLPLVRKARGRVVNVSSIMGRVALLGGGYCMSK 180

Query: 767 HGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQ 946
           +GVEAFSD LR EL +FGVKV ++EPGYF+T +T  +  S+  +  W +    IK+ YG+
Sbjct: 181 YGVEAFSDSLRRELSYFGVKVVMIEPGYFKTAVTSPKALSQGFQASWNQASPEIKELYGE 240

Query: 947 KF 952
           KF
Sbjct: 241 KF 242



 Score = 68.6 bits (166), Expect(2) = e-101
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = +3

Query: 1002 QTLNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            Q L+LVT+CMEHALT+ HPRTRYS GWDA+F ++P+SYL
Sbjct: 259  QDLSLVTNCMEHALTACHPRTRYSPGWDAKFIYLPMSYL 297


>ref|XP_878888.1| PREDICTED: similar to microsomal NAD+-dependent retinol
           dehydrogenase 4 isoform 3 [Bos taurus]
          Length = 317

 Score =  319 bits (817), Expect(2) = e-101
 Identities = 156/242 (64%), Positives = 188/242 (77%)
 Frame = +2

Query: 227 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
           MW             RWYRERQ+VSHL DK+VFITGCDSGFGNLLARQLD+RGLRVLAAC
Sbjct: 1   MWLYLVVLVGLYYLLRWYRERQVVSHLRDKFVFITGCDSGFGNLLARQLDLRGLRVLAAC 60

Query: 407 LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
           LTE+GA+QLR QTSDRL+TV+LDVTKT+S+AAAT+WVKERVGDRGLWGLVNNAG   P  
Sbjct: 61  LTEKGAEQLRNQTSDRLQTVILDVTKTDSVAAATEWVKERVGDRGLWGLVNNAGISTPTA 120

Query: 587 ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSK 766
             EWL  + ++  L VNL+GV +VTLS+LPLV+KA+GR+VNVSSI+GRVA  G  Y  SK
Sbjct: 121 PNEWLTKQDFMKILDVNLLGVIDVTLSVLPLVRKARGRVVNVSSIMGRVALLGGGYCMSK 180

Query: 767 HGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQ 946
           +GVEAFSD LR EL +FGVKV ++EPGYF+T +T  +  S+  +  W +    IK+ YG+
Sbjct: 181 YGVEAFSDSLRRELSYFGVKVVMIEPGYFKTAVTSPKALSQGFQASWNQASPEIKELYGE 240

Query: 947 KF 952
           KF
Sbjct: 241 KF 242



 Score = 68.6 bits (166), Expect(2) = e-101
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = +3

Query: 1002 QTLNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            Q L+LVT+CMEHALT+ HPRTRYS GWDA+F ++P+SYL
Sbjct: 259  QDLSLVTNCMEHALTACHPRTRYSPGWDAKFIYLPMSYL 297


>ref|XP_878794.1| PREDICTED: similar to microsomal NAD+-dependent retinol
           dehydrogenase 4 isoform 2 [Bos taurus]
          Length = 317

 Score =  319 bits (817), Expect(2) = e-101
 Identities = 156/242 (64%), Positives = 188/242 (77%)
 Frame = +2

Query: 227 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
           MW             RWYRERQ+VSHL DK+VFITGCDSGFGNLLARQLD+RGLRVLAAC
Sbjct: 1   MWLYLVVLVGLYYLLRWYRERQVVSHLRDKFVFITGCDSGFGNLLARQLDLRGLRVLAAC 60

Query: 407 LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
           LTE+GA+QLR QTSDRL+TV+LDVTKT+S+AAAT+WVKERVGDRGLWGLVNNAG   P  
Sbjct: 61  LTEKGAEQLRNQTSDRLQTVILDVTKTDSVAAATEWVKERVGDRGLWGLVNNAGISTPTA 120

Query: 587 ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSK 766
             EWL  + ++  L VNL+GV +VTLS+LPLV+KA+GR+VNVSSI+GRVA  G  Y  SK
Sbjct: 121 PNEWLTKQDFMKILDVNLLGVIDVTLSVLPLVRKARGRVVNVSSIMGRVALLGGGYCMSK 180

Query: 767 HGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQ 946
           +GVEAFSD LR EL +FGVKV ++EPGYF+T +T  +  S+  +  W +    IK+ YG+
Sbjct: 181 YGVEAFSDSLRRELSYFGVKVVMIEPGYFKTAVTSPKALSQGFQASWNQASPEIKELYGE 240

Query: 947 KF 952
           KF
Sbjct: 241 KF 242



 Score = 68.6 bits (166), Expect(2) = e-101
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = +3

Query: 1002 QTLNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            Q L+LVT+CMEHALT+ HPRTRYS GWDA+F ++P+SYL
Sbjct: 259  QDLSLVTNCMEHALTACHPRTRYSPGWDAKFIYLPMSYL 297


>ref|XP_869667.1| PREDICTED: similar to microsomal NAD+-dependent retinol
           dehydrogenase 4 isoform 1 [Bos taurus]
          Length = 317

 Score =  319 bits (817), Expect(2) = e-101
 Identities = 156/242 (64%), Positives = 188/242 (77%)
 Frame = +2

Query: 227 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
           MW             RWYRERQ+VSHL DK+VFITGCDSGFGNLLARQLD+RGLRVLAAC
Sbjct: 1   MWLYLVVLVGLYYLLRWYRERQVVSHLRDKFVFITGCDSGFGNLLARQLDLRGLRVLAAC 60

Query: 407 LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
           LTE+GA+QLR QTSDRL+TV+LDVTKT+S+AAAT+WVKERVGDRGLWGLVNNAG   P  
Sbjct: 61  LTEKGAEQLRNQTSDRLQTVILDVTKTDSVAAATEWVKERVGDRGLWGLVNNAGISTPTA 120

Query: 587 ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSK 766
             EWL  + ++  L VNL+GV +VTLS+LPLV+KA+GR+VNVSSI+GRVA  G  Y  SK
Sbjct: 121 PNEWLTKQDFMKILDVNLLGVIDVTLSVLPLVRKARGRVVNVSSIMGRVALLGGGYCMSK 180

Query: 767 HGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQ 946
           +GVEAFSD LR EL +FGVKV ++EPGYF+T +T  +  S+  +  W +    IK+ YG+
Sbjct: 181 YGVEAFSDSLRRELSYFGVKVVMIEPGYFKTAVTSPKALSQGFQASWNQASPEIKELYGE 240

Query: 947 KF 952
           KF
Sbjct: 241 KF 242



 Score = 68.6 bits (166), Expect(2) = e-101
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = +3

Query: 1002 QTLNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            Q L+LVT+CMEHALT+ HPRTRYS GWDA+F ++P+SYL
Sbjct: 259  QDLSLVTNCMEHALTACHPRTRYSPGWDAKFIYLPMSYL 297


>ref|XP_878985.1| PREDICTED: similar to microsomal NAD+-dependent retinol
           dehydrogenase 4 isoform 4 [Bos taurus]
          Length = 317

 Score =  315 bits (806), Expect(2) = 2e-99
 Identities = 154/240 (64%), Positives = 186/240 (77%)
 Frame = +2

Query: 227 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
           MW             RWYRERQ+VSHL DK+VFITGCDSGFGNLLARQLD+RGLRVLAAC
Sbjct: 1   MWLYLVVLVGLYYLLRWYRERQVVSHLRDKFVFITGCDSGFGNLLARQLDLRGLRVLAAC 60

Query: 407 LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
           LTE+GA+QLR QTSDRL+TV+LDVTKT+S+AAAT+WVKERVGDRGLWGLVNNAG   P  
Sbjct: 61  LTEKGAEQLRNQTSDRLQTVILDVTKTDSVAAATEWVKERVGDRGLWGLVNNAGISTPTA 120

Query: 587 ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSK 766
             EWL  + ++  L VNL+GV +VTLS+LPLV+KA+GR+VNVSSI+GRVA  G  Y  SK
Sbjct: 121 PNEWLTKQDFMKILDVNLLGVIDVTLSVLPLVRKARGRVVNVSSIMGRVALLGGGYCMSK 180

Query: 767 HGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQ 946
           +GVEAFSD LR EL +FGVKV ++EPGYF+T +T  +  S+  +  W +    IK+ YG+
Sbjct: 181 YGVEAFSDSLRRELSYFGVKVVMIEPGYFKTAVTSPKALSQGFQASWNQASPEIKELYGE 240



 Score = 67.0 bits (162), Expect(2) = 2e-99
 Identities = 27/37 (72%), Positives = 34/37 (91%)
 Frame = +3

Query: 1008 LNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            L+LVT+CMEHALT+ HPRTRYS GWDA+F ++P+SYL
Sbjct: 261  LSLVTNCMEHALTACHPRTRYSPGWDAKFIYLPMSYL 297


>ref|XP_601132.2| PREDICTED: similar to microsomal NAD+-dependent retinol
           dehydrogenase 4 [Bos taurus]
          Length = 338

 Score =  300 bits (768), Expect(2) = 1e-95
 Identities = 151/263 (57%), Positives = 186/263 (70%), Gaps = 21/263 (7%)
 Frame = +2

Query: 227 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
           MW             RWYRERQ+VSHL DK+VFITGCDSGFGN LARQLD++GLRVLAAC
Sbjct: 1   MWLYLAVLLGLYYFLRWYRERQVVSHLRDKFVFITGCDSGFGNQLARQLDLKGLRVLAAC 60

Query: 407 LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
           L +QGA+QLR QTSDRL+TV+LDVTKTES+AAAT+WVKERVGDRGLWGLVNNAG   P+ 
Sbjct: 61  LMKQGAEQLRNQTSDRLQTVILDVTKTESVAAATEWVKERVGDRGLWGLVNNAGICTPMA 120

Query: 587 ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSK 766
             +WL  + ++  L+VNL+GV +VTLS+LPLV+KA+G +VNVSS++GR+A FG  YS SK
Sbjct: 121 PNQWLTKQDFVKILEVNLLGVIDVTLSLLPLVRKARGHVVNVSSVMGRMAVFGGGYSMSK 180

Query: 767 HGVEAFSDVL---------------------RCELQHFGVKVSIVEPGYFRTGMTDVQKS 883
           +GVEAFSD L                     R EL +FGVKV+++EPGYF T MT  +  
Sbjct: 181 YGVEAFSDSLSSSHLLCMSFDGKHVHVFGIPRRELSYFGVKVAVIEPGYFLTDMTQEEVY 240

Query: 884 SEAMKQVWKEVPAHIKDTYGQKF 952
            E ++  W      I++ YG  F
Sbjct: 241 HENLQTSWDHASPEIQELYGDNF 263



 Score = 69.3 bits (168), Expect(2) = 1e-95
 Identities = 28/40 (70%), Positives = 37/40 (92%)
 Frame = +3

Query: 999  AQTLNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            A+ L+LVT+CMEHALT+ HPR+RYSAGWDA+F ++P+SYL
Sbjct: 279  ARNLSLVTNCMEHALTACHPRSRYSAGWDAKFLYLPMSYL 318


>ref|XP_583421.2| PREDICTED: similar to orphan short-chain dehydrogenase / reductase
           [Bos taurus]
          Length = 313

 Score =  277 bits (709), Expect(2) = 1e-79
 Identities = 135/236 (57%), Positives = 179/236 (75%)
 Frame = +2

Query: 272 RWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEQGAQQLRKQTSD 451
           RW++   +V +L DKYVFITGCDSGFGNLLARQL  RG+RVLAAC T++GAQ+L++ TS 
Sbjct: 12  RWFKNCNLVRNLSDKYVFITGCDSGFGNLLARQLVDRGMRVLAACFTKEGAQKLQQDTSY 71

Query: 452 RLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLCITEWLKTETWIHTLK 631
           +L+T+LLDVTKTESI AATQWV+++VG++GLW LVNNAG   P    EWL  E ++  + 
Sbjct: 72  QLQTILLDVTKTESIKAATQWVRDQVGEQGLWALVNNAGVGLPSGPNEWLTKEDFVKVIN 131

Query: 632 VNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSKHGVEAFSDVLRCELQ 811
           VNL+G+ EVTL MLP+VKKA+GR+VN+SS  GRVA  G  Y  SK GVEAFSD +R EL 
Sbjct: 132 VNLVGLIEVTLHMLPMVKKARGRVVNMSSSGGRVAVIGGGYCISKFGVEAFSDSIRRELH 191

Query: 812 HFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQKFFDAYHDVMK 979
           +FGVKVSI+EPG FRT +       + M+++W+ +P   +++YG+++F  Y D +K
Sbjct: 192 YFGVKVSIIEPGNFRTAILGKDGLEKHMRKLWERLPPETRESYGEEYFRIYTDNLK 247



 Score = 38.5 bits (88), Expect(2) = 1e-79
 Identities = 16/32 (50%), Positives = 23/32 (71%)
 Frame = +3

Query: 1017 VTDCMEHALTSVHPRTRYSAGWDAQFFFIPLS 1112
            VT+ MEHA+ S  PR RY+ G DA+  ++PL+
Sbjct: 260  VTNSMEHAIVSRSPRIRYNPGLDAKLLYLPLA 291


>ref|NP_777158.1| NADP-dependent retinol dehydrogenase/reductase [Bos taurus]
          Length = 319

 Score =  249 bits (635), Expect(2) = 8e-76
 Identities = 119/236 (50%), Positives = 168/236 (71%), Gaps = 1/236 (0%)
 Frame = +2

Query: 275 WYRERQM-VSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEQGAQQLRKQTSD 451
           W  +RQ+ ++++ DKY+FITGCD+GFGNL AR  D +G  V+AACLTE G+  L+ +TS+
Sbjct: 16  WNYKRQLKIANITDKYIFITGCDTGFGNLAARTFDKKGFHVIAACLTESGSTALKAETSE 75

Query: 452 RLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLCITEWLKTETWIHTLK 631
           RL TVLLDVT  E++  A QWVK +VG++GLWGL+NNAG    L   +WL  E +   ++
Sbjct: 76  RLHTVLLDVTDPENVKRAAQWVKNQVGEKGLWGLINNAGILGVLAPNDWLTVEDYREPVE 135

Query: 632 VNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSKHGVEAFSDVLRCELQ 811
           VNL G+  VTL+MLPLVKKA+GRI+NVSSI GR+AF G  YS SK+ VE F+D LR +++
Sbjct: 136 VNLFGLISVTLNMLPLVKKARGRIINVSSIGGRLAFGGGGYSPSKYAVEGFNDSLRRDMK 195

Query: 812 HFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQKFFDAYHDVMK 979
            FGV V+ +EPG F+T ++D +K++E    +WK +   IK  YG+ + +   + +K
Sbjct: 196 AFGVHVACIEPGLFKTNLSDPEKTAEKKLAIWKHLSPDIKQQYGESYIEKSLEQLK 251



 Score = 54.3 bits (129), Expect(2) = 8e-76
 Identities = 23/37 (62%), Positives = 33/37 (89%)
 Frame = +3

Query: 1008 LNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            L+LV +CM+HALTS+ P+TRY+AG DA+ F+IPLS++
Sbjct: 261  LSLVVECMDHALTSLFPKTRYAAGKDAKTFWIPLSHM 297


>ref|XP_597943.2| PREDICTED: similar to microsomal NAD+-dependent retinol
           dehydrogenase 4 [Bos taurus]
          Length = 260

 Score =  272 bits (695), Expect = 4e-73
 Identities = 142/255 (55%), Positives = 175/255 (68%), Gaps = 13/255 (5%)
 Frame = +2

Query: 227 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
           MW             RWYRERQ+VSHL DK+VFITGCDSGFGN LARQLD RGLRVLAAC
Sbjct: 1   MWLYLVVLVVLYYLLRWYRERQVVSHLEDKFVFITGCDSGFGNRLARQLDQRGLRVLAAC 60

Query: 407 LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
           LTEQGA+QLR QTSDRL+TV+LDVTKTE++ A T WVKE VGDRGLWGLVNNAG   P+ 
Sbjct: 61  LTEQGAEQLRNQTSDRLQTVILDVTKTENVTATTNWVKEHVGDRGLWGLVNNAGICTPMA 120

Query: 587 ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRV-------AFFG 745
             EWL  + ++  L VNL+GV +VTLS+L LV+KA+GR+VNVSS+LGRV       A+  
Sbjct: 121 PNEWLTKQDFVKVLDVNLLGVIDVTLSLLSLVRKARGRVVNVSSVLGRVSLVLQATAYPS 180

Query: 746 AVYSSSKHGVE------AFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVW 907
            V+  S+   E      A  +  R EL +FGVKV+++EPGYF T MT  +     ++ +W
Sbjct: 181 TVWRPSQTLSEFDSTYPALQEGPRRELSYFGVKVAMIEPGYFVTNMTQDEGFIGYLQALW 240

Query: 908 KEVPAHIKDTYGQKF 952
                 +K+ YG+ F
Sbjct: 241 NPASPELKELYGENF 255


  Database: RefSeqBP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 16,112,626
  Number of sequences in database:  33,508
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,686,811
Number of Sequences: 33508
Number of extensions: 937528
Number of successful extensions: 3960
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 3148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3916
length of database: 16,112,626
effective HSP length: 103
effective length of database: 12,661,302
effective search space used: 3405890238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqSP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611C-000288
         (1119 letters)

Database: RefSeqSP 
           1040 sequences; 434,620 total letters

Searching...done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_999078.1| hydroxysteroid 11-beta dehydrogenase 2 [Sus scr...   145   2e-36
Alignment   gi|NP_998992.1| carbonyl reductase [Sus scrofa]                       51   6e-08
Alignment   gi|NP_999238.1| 20-beta-hydroxysteroid dehydrogenase [Sus scrofa]     50   8e-08
Alignment   gi|NP_999413.1| 11-beta hydroxysteroid dehydrogenase isoform 1 ...    47   1e-06

>ref|NP_999078.1| hydroxysteroid 11-beta dehydrogenase 2 [Sus scrofa]
          Length = 400

 Score =  145 bits (366), Expect = 2e-36
 Identities = 86/228 (37%), Positives = 125/228 (54%), Gaps = 4/228 (1%)
 Frame = +2

Query: 320 VFITGCDSGFGNLLARQLDVRGLRVLAACLT--EQGAQQLRKQTSDRLETVLLDVTKTES 493
           V ITGCDSGFG   A++LD  G  VLA  L     GAQ+LR   S RL+ + +D+TK   
Sbjct: 85  VLITGCDSGFGKATAKKLDAMGFTVLATVLELDSPGAQELRACCSPRLKLLQMDLTKPAD 144

Query: 494 IAAATQWVKERVGDRGLWGLVNNAGTFHPLCITEWLKTETWIHTLKVNLIGVTEVTLSML 673
           I+   ++ K      GLWGLVNNAG    +   E     T+   ++VN  G  E+T ++L
Sbjct: 145 ISRVLEFTKVHTASTGLWGLVNNAGHNILVADAELSPVATYRSCMEVNFFGTLEMTKALL 204

Query: 674 PLVKKAQGRIVNVSSILGRVAF-FGAVYSSSKHGVEAFSDVLRCELQHFGVKVSIVEPGY 850
           PL++++ GRIV VSS  G + F   + Y +SK  V    D   CELQ +GVKVS+++P  
Sbjct: 205 PLLRRSSGRIVTVSSPAGDMPFPCLSAYGTSKAAVALLMDSFSCELQPWGVKVSVIQPAC 264

Query: 851 FRT-GMTDVQKSSEAMKQVWKEVPAHIKDTYGQKFFDAYHDVMKQGLS 991
           FRT  + +V +  E  +Q+   +P  +   YG+ + +  +      LS
Sbjct: 265 FRTEAVKNVDQWEERKRQLLATLPQELLQAYGEDYIEHLNGQFLHSLS 312


>ref|NP_998992.1| carbonyl reductase [Sus scrofa]
          Length = 244

 Score = 50.8 bits (120), Expect = 6e-08
 Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 3/199 (1%)
 Frame = +2

Query: 326 ITGCDSGFGNLLARQLDVRGLRVLAACLTEQGAQQLRKQTSDRLETVLLDVTKTESIAAA 505
           +TG   G G    + L V G RV+A   T      L  Q    +E V +D+   E    A
Sbjct: 12  VTGAGKGIGRDTVKALHVSGARVVAVTRTNGDLVSL-SQECPGIEPVCVDLGDWE----A 66

Query: 506 TQWVKERVGDRGLWGLVNNAGTFHPLCITEWLKTETWIHTLKVNLIGVTEVT--LSMLPL 679
           T+     VG   L  LVNNA         +  K E +  +  VNL  V +V+  ++   +
Sbjct: 67  TERALGGVGPVDL--LVNNAAVALMQPFLDTTK-EVFDRSFNVNLRSVFQVSQIVARSMI 123

Query: 680 VKKAQGRIVNVSSILGRVAFFG-AVYSSSKHGVEAFSDVLRCELQHFGVKVSIVEPGYFR 856
            +   G IVNVSS++  V + G A YSS+K  +   +  +  EL    ++V+ V P    
Sbjct: 124 ERGVPGSIVNVSSMVSHVTYPGLAAYSSTKGAMTMLTKSMAMELGPHKIRVNSVNPTVVL 183

Query: 857 TGMTDVQKSSEAMKQVWKE 913
           T M     S   + +  KE
Sbjct: 184 TAMGRSVTSDPELARKLKE 202


>ref|NP_999238.1| 20-beta-hydroxysteroid dehydrogenase [Sus scrofa]
          Length = 289

 Score = 50.4 bits (119), Expect = 8e-08
 Identities = 47/147 (31%), Positives = 68/147 (46%), Gaps = 9/147 (6%)
 Frame = +2

Query: 314 KYVFITGCDSGFGNLLARQL--DVRGLRVLAACLTEQGAQQLRKQTSDRLETVL--LDVT 481
           +   +TG + G G  + R L     G  VL A    +G   +++  ++ L      LD+ 
Sbjct: 6   RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQLDII 65

Query: 482 KTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLCITEWLKTETWIH-----TLKVNLIG 646
             +SI A   ++++  G  GL  LVNNA       I   L   T  H     T+K N +G
Sbjct: 66  DLQSIRALCDFLRKEYG--GLDVLVNNAA------IAFQLDNPTPFHIQAELTMKTNFMG 117

Query: 647 VTEVTLSMLPLVKKAQGRIVNVSSILG 727
              V   +LPL+ K QGR+VNVSS  G
Sbjct: 118 TRNVCTELLPLI-KPQGRVVNVSSTEG 143


>ref|NP_999413.1| 11-beta hydroxysteroid dehydrogenase isoform 1 [Sus scrofa]
          Length = 292

 Score = 46.6 bits (109), Expect = 1e-06
 Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
 Frame = +2

Query: 305 LGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEQGAQQLRKQTSDRLETVLLDVTK 484
           L  K V +TG   G G  +A  L   G  V+   +T +  + L+K  S  LE   L  + 
Sbjct: 32  LRGKKVIVTGASKGIGREMAYHLARMGAHVV---VTARSEETLKKVVSHSLE---LGASS 85

Query: 485 TESIAAATQ---WVKERVGDRG-LWGLVNNAGTFHPLCITEWLKTETW--IH----TLKV 634
              +A   +   + ++ V   G L G ++     H   IT+   T  +  IH    +++V
Sbjct: 86  AHYVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNH---ITQAFMTSVYDDIHLVRRSMEV 142

Query: 635 NLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAF-FGAVYSSSKHGVEAFSDVLRCELQ 811
           N +    ++++ LP++K++ G IV VSS  G++A    A YS+SK  ++ F   +  E  
Sbjct: 143 NFLSYVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLVAPYSASKFALDGFFSSITKEYS 202

Query: 812 HFGVKVSI 835
              V VSI
Sbjct: 203 VTKVNVSI 210


  Database: RefSeqSP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 434,620
  Number of sequences in database:  1040
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,022,544
Number of Sequences: 1040
Number of extensions: 24940
Number of successful extensions: 111
Number of sequences better than 1.0e-05: 4
Number of HSP's better than  0.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 434,620
effective HSP length: 78
effective length of database: 353,500
effective search space used: 103929000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqHP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611C-000288
         (1119 letters)

Database: RefSeqHP 
           39,411 sequences; 17,774,539 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_003716.2| 3-hydroxysteroid epimerase [Homo sapiens]            385   e-125
Alignment   gi|NP_003699.2| retinol dehydrogenase 16 [Homo sapiens]              300   2e-94
Alignment   gi|NP_683695.1| orphan short-chain dehydrogenase / reductase [H...   268   1e-76
Alignment   gi|NP_005762.2| NADP-dependent retinol dehydrogenase/reductase ...   242   8e-73
Alignment   gi|NP_954674.1| NADP-dependent retinol dehydrogenase/reductase ...   242   8e-73
Alignment   gi|NP_002896.2| retinol dehydrogenase 5 (11-cis and 9-cis) [Hom...   215   2e-66
Alignment   gi|NP_976059.1| 3-hydroxybutyrate dehydrogenase precursor [Homo...   176   3e-44
Alignment   gi|NP_976060.1| 3-hydroxybutyrate dehydrogenase precursor [Homo...   176   3e-44
Alignment   gi|NP_004042.1| 3-hydroxybutyrate dehydrogenase precursor [Homo...   176   3e-44
Alignment   gi|NP_002144.1| hydroxysteroid (17-beta) dehydrogenase 2 [Homo ...   139   4e-33

>ref|NP_003716.2| 3-hydroxysteroid epimerase [Homo sapiens]
          Length = 317

 Score =  385 bits (990), Expect(2) = e-125
 Identities = 190/260 (73%), Positives = 216/260 (83%)
 Frame = +2

Query: 227  MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
            MW              WYRERQ+VSHL DKYVFITGCDSGFGNLLARQLD RGLRVLAAC
Sbjct: 1    MWLYLAAFVGLYYLLHWYRERQVVSHLQDKYVFITGCDSGFGNLLARQLDARGLRVLAAC 60

Query: 407  LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
            LTE+GA+QLR QTSDRLETV LDVTK ESIAAATQWVKE VGDRGLWGLVNNAG   P+ 
Sbjct: 61   LTEKGAEQLRGQTSDRLETVTLDVTKMESIAAATQWVKEHVGDRGLWGLVNNAGILTPIT 120

Query: 587  ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSK 766
            + EWL TE  ++ LKVNLIGV +VTLSMLPLV++A+GRIVNVSSILGRVAFF   Y  SK
Sbjct: 121  LCEWLNTEDSMNMLKVNLIGVIQVTLSMLPLVRRARGRIVNVSSILGRVAFFVGGYCVSK 180

Query: 767  HGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQ 946
            +GVEAFSD+LR E+QHFGVK+SIVEPGYFRTGMT++ +S E MKQ WKE P HIK+TYGQ
Sbjct: 181  YGVEAFSDILRREIQHFGVKISIVEPGYFRTGMTNMTQSLERMKQSWKEAPKHIKETYGQ 240

Query: 947  KFFDAYHDVMKQGLSSCSTN 1006
            ++FDA +++MK+GL +CSTN
Sbjct: 241  QYFDALYNIMKEGLLNCSTN 260



 Score = 83.2 bits (204), Expect(2) = e-125
 Identities = 38/46 (82%), Positives = 41/46 (89%)
 Frame = +3

Query: 981  KGCLVVAQTLNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            +G L  +  LNLVTDCMEHALTSVHPRTRYSAGWDA+FFFIPLSYL
Sbjct: 252  EGLLNCSTNLNLVTDCMEHALTSVHPRTRYSAGWDAKFFFIPLSYL 297


>ref|NP_003699.2| retinol dehydrogenase 16 [Homo sapiens]
          Length = 317

 Score =  300 bits (768), Expect(2) = 2e-94
 Identities = 149/258 (57%), Positives = 186/258 (72%)
 Frame = +2

Query: 227  MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
            MW              WYRERQ++SHL DKYVFITGCDSGFG LLARQLD RGLRVLAAC
Sbjct: 1    MWLYLAVFVGLYYLLHWYRERQVLSHLRDKYVFITGCDSGFGKLLARQLDARGLRVLAAC 60

Query: 407  LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
            LTE+GA+QLR QTSDRLETV LDVTKTES+AAA QWVKE V D+GLWGLVNNAG   P  
Sbjct: 61   LTEKGAEQLRGQTSDRLETVTLDVTKTESVAAAAQWVKECVRDKGLWGLVNNAGISLPTA 120

Query: 587  ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSK 766
              E L  +  +  L VNL+GV +VTL++LPLV++A+GR+VNV S++GRV+ FG  Y  SK
Sbjct: 121  PNELLTKQDLLTILDVNLLGVIDVTLNLLPLVRRARGRVVNVFSVMGRVSLFGGGYCISK 180

Query: 767  HGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQ 946
            +GVEAFSD LR EL +FGVKV+++EPGYF+T +T  ++  ++  ++W      +K+ YG+
Sbjct: 181  YGVEAFSDSLRRELSYFGVKVAMIEPGYFKTAVTSKERFLKSFLEIWDRSSPEVKEAYGE 240

Query: 947  KFFDAYHDVMKQGLSSCS 1000
            KF   Y    +Q    C+
Sbjct: 241  KFVADYKKSAEQMEQKCT 258



 Score = 65.1 bits (157), Expect(2) = 2e-94
 Identities = 26/39 (66%), Positives = 34/39 (87%)
 Frame = +3

Query: 1002 QTLNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            Q L+LVT+CMEHAL + HPRTRYSAGWDA+  ++P+SY+
Sbjct: 259  QDLSLVTNCMEHALIACHPRTRYSAGWDAKLLYLPMSYM 297


>ref|NP_683695.1| orphan short-chain dehydrogenase / reductase [Homo sapiens]
          Length = 313

 Score =  268 bits (686), Expect(2) = 1e-76
 Identities = 128/236 (54%), Positives = 175/236 (74%)
 Frame = +2

Query: 272 RWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEQGAQQLRKQTSD 451
           RW++   +V +L +KYVFITGCDSGFGNLLA+QL  RG++VLAAC TE+G+Q+L++ TS 
Sbjct: 12  RWFKNCNLVGNLSEKYVFITGCDSGFGNLLAKQLVDRGMQVLAACFTEEGSQKLQRDTSY 71

Query: 452 RLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLCITEWLKTETWIHTLK 631
           RL+T LLDVTK+ESI AA QWV+++VG++GLW LVNNAG   P    EWL  + ++  + 
Sbjct: 72  RLQTTLLDVTKSESIKAAAQWVRDKVGEQGLWALVNNAGVGLPSGPNEWLTKDDFVKVIN 131

Query: 632 VNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSKHGVEAFSDVLRCELQ 811
           VNL+G+ EVTL MLP+VK+A+GR+VN+SS  GRVA  G  Y  SK GVEAFSD +R EL 
Sbjct: 132 VNLVGLIEVTLHMLPMVKRARGRVVNMSSSGGRVAVIGGGYCVSKFGVEAFSDSIRRELY 191

Query: 812 HFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQKFFDAYHDVMK 979
           +FGVKV I+EPG +RT +   +     M+++W+ +P   +D+YG+ +F  Y D +K
Sbjct: 192 YFGVKVCIIEPGNYRTAILGKENLESRMRKLWERLPQETRDSYGEDYFRIYTDKLK 247



 Score = 37.7 bits (86), Expect(2) = 1e-76
 Identities = 17/34 (50%), Positives = 23/34 (67%)
 Frame = +3

Query: 1017 VTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            V + MEHA+ S  PR RY+ G DA+  +IPL+ L
Sbjct: 260  VINSMEHAIVSRSPRIRYNPGLDAKLLYIPLAKL 293


>ref|NP_005762.2| NADP-dependent retinol dehydrogenase/reductase [Homo sapiens]
          Length = 319

 Score =  242 bits (618), Expect(2) = 8e-73
 Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 1/248 (0%)
 Frame = +2

Query: 275  WYRERQM-VSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEQGAQQLRKQTSD 451
            W R+ ++ +  + DKY+FITGCDSGFGNL AR  D +G  V+AACLTE G+  L+ +TS+
Sbjct: 16   WTRKGKLKIEDITDKYIFITGCDSGFGNLAARTFDKKGFHVIAACLTESGSTALKAETSE 75

Query: 452  RLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLCITEWLKTETWIHTLK 631
            RL TVLLDVT  E++    QWVK +VG++GLWGL+NNAG    L  T+WL  E +   ++
Sbjct: 76   RLRTVLLDVTDPENVKRTAQWVKNQVGEKGLWGLINNAGVPGVLAPTDWLTLEDYREPIE 135

Query: 632  VNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSKHGVEAFSDVLRCELQ 811
            VNL G+  VTL+MLPLVKKAQGR++NVSS+ GR+A  G  Y+ SK+ VE F+D LR +++
Sbjct: 136  VNLFGLISVTLNMLPLVKKAQGRVINVSSVGGRLAIVGGGYTPSKYAVEGFNDSLRRDMK 195

Query: 812  HFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQKFFDAYHDVMKQGLS 991
             FGV VS +EPG F+T + D  K  E    +W+++   IK  YG+ + +   D +K   S
Sbjct: 196  AFGVHVSCIEPGLFKTNLADPVKVIEKKLAIWEQLSPDIKQQYGEGYIEKSLDKLKGNKS 255

Query: 992  SCSTNPEP 1015
              + +  P
Sbjct: 256  YVNMDLSP 263



 Score = 50.8 bits (120), Expect(2) = 8e-73
 Identities = 22/41 (53%), Positives = 32/41 (78%)
 Frame = +3

Query: 996  VAQTLNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            V   L+ V +CM+HALTS+ P+T Y+AG DA+ F+IPLS++
Sbjct: 257  VNMDLSPVVECMDHALTSLFPKTHYAAGKDAKIFWIPLSHM 297


>ref|NP_954674.1| NADP-dependent retinol dehydrogenase/reductase [Homo sapiens]
          Length = 319

 Score =  242 bits (618), Expect(2) = 8e-73
 Identities = 119/248 (47%), Positives = 166/248 (66%), Gaps = 1/248 (0%)
 Frame = +2

Query: 275  WYRERQM-VSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEQGAQQLRKQTSD 451
            W R+ ++ +  + DKY+FITGCDSGFGNL AR  D +G  V+AACLTE G+  L+ +TS+
Sbjct: 16   WTRKGKLKIEDITDKYIFITGCDSGFGNLAARTFDKKGFHVIAACLTESGSTALKAETSE 75

Query: 452  RLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLCITEWLKTETWIHTLK 631
            RL TVLLDVT  E++    QWVK +VG++GLWGL+NNAG    L  T+WL  E +   ++
Sbjct: 76   RLRTVLLDVTDPENVKRTAQWVKNQVGEKGLWGLINNAGVPGVLAPTDWLTLEDYREPIE 135

Query: 632  VNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSKHGVEAFSDVLRCELQ 811
            VNL G+  VTL+MLPLVKKAQGR++NVSS+ GR+A  G  Y+ SK+ VE F+D LR +++
Sbjct: 136  VNLFGLISVTLNMLPLVKKAQGRVINVSSVGGRLAIVGGGYTPSKYAVEGFNDSLRRDMK 195

Query: 812  HFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQKFFDAYHDVMKQGLS 991
             FGV VS +EPG F+T + D  K  E    +W+++   IK  YG+ + +   D +K   S
Sbjct: 196  AFGVHVSCIEPGLFKTNLADPVKVIEKKLAIWEQLSPDIKQQYGEGYIEKSLDKLKGNKS 255

Query: 992  SCSTNPEP 1015
              + +  P
Sbjct: 256  YVNMDLSP 263



 Score = 50.8 bits (120), Expect(2) = 8e-73
 Identities = 22/41 (53%), Positives = 32/41 (78%)
 Frame = +3

Query: 996  VAQTLNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            V   L+ V +CM+HALTS+ P+T Y+AG DA+ F+IPLS++
Sbjct: 257  VNMDLSPVVECMDHALTSLFPKTHYAAGKDAKIFWIPLSHM 297


>ref|NP_002896.2| retinol dehydrogenase 5 (11-cis and 9-cis) [Homo sapiens]
          Length = 318

 Score =  215 bits (548), Expect(2) = 2e-66
 Identities = 111/244 (45%), Positives = 162/244 (66%)
 Frame = +2

Query: 281  RERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEQGAQQLRKQTSDRLE 460
            R+RQ +    + +VFITGCDSGFG LLA QLD RG RVLA+CLT  GA+ L++  S RL 
Sbjct: 19   RDRQSLP-ASNAFVFITGCDSGFGRLLALQLDQRGFRVLASCLTPSGAEDLQRVASSRLH 77

Query: 461  TVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLCITEWLKTETWIHTLKVNL 640
            T LLD+T  +S+  A +WV+  V + GL+GLVNNAG    +  T WL  + +   L VN 
Sbjct: 78   TTLLDITDPQSVQQAAKWVEMHVKEAGLFGLVNNAGVAGIIGPTPWLTRDDFQRVLNVNT 137

Query: 641  IGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSKHGVEAFSDVLRCELQHFG 820
            +G   VTL++LPL+++A+GR++N++S+LGR+A  G  Y  SK G+EAFSD LR ++ HFG
Sbjct: 138  MGPIGVTLALLPLLQQARGRVINITSVLGRLAANGGGYCVSKFGLEAFSDSLRRDVAHFG 197

Query: 821  VKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQKFFDAYHDVMKQGLSSCS 1000
            ++VSIVEPG+FRT +T+++   + ++  W  +P   +  YG  F   Y   M+Q + +  
Sbjct: 198  IRVSIVEPGFFRTPVTNLESLEKTLQACWARLPPATQAHYGGAFLTKYLK-MQQRIMNLI 256

Query: 1001 TNPE 1012
             +P+
Sbjct: 257  CDPD 260



 Score = 56.2 bits (134), Expect(2) = 2e-66
 Identities = 24/43 (55%), Positives = 31/43 (72%)
 Frame = +3

Query: 990  LVVAQTLNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            L+    L  V+ C+EHALT+ HPRTRYS GWDA+  ++P SYL
Sbjct: 255  LICDPDLTKVSRCLEHALTARHPRTRYSPGWDAKLLWLPASYL 297


>ref|NP_976059.1| 3-hydroxybutyrate dehydrogenase precursor [Homo sapiens]
          Length = 343

 Score =  176 bits (446), Expect = 3e-44
 Identities = 112/282 (39%), Positives = 156/282 (55%), Gaps = 16/282 (5%)
 Frame = +2

Query: 305  LGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEQ----GAQQLRKQTSDRLETVLL 472
            +G K V +TGCDSGFG  LA+ L  +G  V A CL +     G ++L    SDRL TV L
Sbjct: 53   VGSKAVLVTGCDSGFGFSLAKHLHSKGFLVFAGCLMKDKGHDGVKELDSLNSDRLRTVQL 112

Query: 473  DVTKTESIAAATQWVKERVGD--RGLWGLVNNAG--TFHPLCITEWLKTETWIHTLKVNL 640
            +V  +E +    + V+  + D  +G+WGLVNNAG  TF  +   E+   ET+    +VNL
Sbjct: 113  NVCSSEEVEKVVEIVRSSLKDPEKGMWGLVNNAGISTFGEV---EFTSLETYKQVAEVNL 169

Query: 641  IGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAF-FGAVYSSSKHGVEAFSDVLRCELQHF 817
             G   +T S LPL+++A+GR+VN+SS+LGR+A    + Y  +K GVEAFSD LR E+   
Sbjct: 170  WGTVRMTKSFLPLIRRAKGRVVNISSMLGRMANPARSPYCITKFGVEAFSDCLRYEMYPL 229

Query: 818  GVKVSIVEPGYF--RTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQKFFDAYHDVMKQGLS 991
            GVKVS+VEPG F   T +   +      K++W+E+P  ++  YG+K+FD     M+   S
Sbjct: 230  GVKVSVVEPGNFIAATSLYSPESIQAIAKKMWEELPEVVRKDYGKKYFDEKIAKMETYCS 289

Query: 992  SCSTNPEP-----GHGLHGTRSDICASPHSVLSWLGCSIFLH 1102
            S ST+  P      H L  T       P     WL   I  H
Sbjct: 290  SGSTDTSPVIDAVTHALTATTPYTRYHPMDYYWWLRMQIMTH 331


>ref|NP_976060.1| 3-hydroxybutyrate dehydrogenase precursor [Homo sapiens]
          Length = 343

 Score =  176 bits (446), Expect = 3e-44
 Identities = 112/282 (39%), Positives = 156/282 (55%), Gaps = 16/282 (5%)
 Frame = +2

Query: 305  LGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEQ----GAQQLRKQTSDRLETVLL 472
            +G K V +TGCDSGFG  LA+ L  +G  V A CL +     G ++L    SDRL TV L
Sbjct: 53   VGSKAVLVTGCDSGFGFSLAKHLHSKGFLVFAGCLMKDKGHDGVKELDSLNSDRLRTVQL 112

Query: 473  DVTKTESIAAATQWVKERVGD--RGLWGLVNNAG--TFHPLCITEWLKTETWIHTLKVNL 640
            +V  +E +    + V+  + D  +G+WGLVNNAG  TF  +   E+   ET+    +VNL
Sbjct: 113  NVCSSEEVEKVVEIVRSSLKDPEKGMWGLVNNAGISTFGEV---EFTSLETYKQVAEVNL 169

Query: 641  IGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAF-FGAVYSSSKHGVEAFSDVLRCELQHF 817
             G   +T S LPL+++A+GR+VN+SS+LGR+A    + Y  +K GVEAFSD LR E+   
Sbjct: 170  WGTVRMTKSFLPLIRRAKGRVVNISSMLGRMANPARSPYCITKFGVEAFSDCLRYEMYPL 229

Query: 818  GVKVSIVEPGYF--RTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQKFFDAYHDVMKQGLS 991
            GVKVS+VEPG F   T +   +      K++W+E+P  ++  YG+K+FD     M+   S
Sbjct: 230  GVKVSVVEPGNFIAATSLYSPESIQAIAKKMWEELPEVVRKDYGKKYFDEKIAKMETYCS 289

Query: 992  SCSTNPEP-----GHGLHGTRSDICASPHSVLSWLGCSIFLH 1102
            S ST+  P      H L  T       P     WL   I  H
Sbjct: 290  SGSTDTSPVIDAVTHALTATTPYTRYHPMDYYWWLRMQIMTH 331


>ref|NP_004042.1| 3-hydroxybutyrate dehydrogenase precursor [Homo sapiens]
          Length = 343

 Score =  176 bits (446), Expect = 3e-44
 Identities = 112/282 (39%), Positives = 156/282 (55%), Gaps = 16/282 (5%)
 Frame = +2

Query: 305  LGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEQ----GAQQLRKQTSDRLETVLL 472
            +G K V +TGCDSGFG  LA+ L  +G  V A CL +     G ++L    SDRL TV L
Sbjct: 53   VGSKAVLVTGCDSGFGFSLAKHLHSKGFLVFAGCLMKDKGHDGVKELDSLNSDRLRTVQL 112

Query: 473  DVTKTESIAAATQWVKERVGD--RGLWGLVNNAG--TFHPLCITEWLKTETWIHTLKVNL 640
            +V  +E +    + V+  + D  +G+WGLVNNAG  TF  +   E+   ET+    +VNL
Sbjct: 113  NVCSSEEVEKVVEIVRSSLKDPEKGMWGLVNNAGISTFGEV---EFTSLETYKQVAEVNL 169

Query: 641  IGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAF-FGAVYSSSKHGVEAFSDVLRCELQHF 817
             G   +T S LPL+++A+GR+VN+SS+LGR+A    + Y  +K GVEAFSD LR E+   
Sbjct: 170  WGTVRMTKSFLPLIRRAKGRVVNISSMLGRMANPARSPYCITKFGVEAFSDCLRYEMYPL 229

Query: 818  GVKVSIVEPGYF--RTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQKFFDAYHDVMKQGLS 991
            GVKVS+VEPG F   T +   +      K++W+E+P  ++  YG+K+FD     M+   S
Sbjct: 230  GVKVSVVEPGNFIAATSLYSPESIQAIAKKMWEELPEVVRKDYGKKYFDEKIAKMETYCS 289

Query: 992  SCSTNPEP-----GHGLHGTRSDICASPHSVLSWLGCSIFLH 1102
            S ST+  P      H L  T       P     WL   I  H
Sbjct: 290  SGSTDTSPVIDAVTHALTATTPYTRYHPMDYYWWLRMQIMTH 331


>ref|NP_002144.1| hydroxysteroid (17-beta) dehydrogenase 2 [Homo sapiens]
          Length = 387

 Score =  139 bits (350), Expect = 4e-33
 Identities = 86/237 (36%), Positives = 125/237 (52%), Gaps = 4/237 (1%)
 Frame = +2

Query: 278 YRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEQG--AQQLRKQTSD 451
           Y   Q +  +  K V +TG D G G+ L + LD  G  V A  L E G  A++LR+  S 
Sbjct: 71  YLSGQELLPVDQKAVLVTGGDCGLGHALCKYLDELGFTVFAGVLNENGPGAEELRRTCSP 130

Query: 452 RLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLCITEWLKTETWIHTLK 631
           RL  + +D+TK   I  A   V   + DRGLW ++NNAG        E L    +   + 
Sbjct: 131 RLSVLQMDITKPVQIKDAYSKVAAMLQDRGLWAVINNAGVLGFPTDGELLLMTDYKQCMA 190

Query: 632 VNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFG-AVYSSSKHGVEAFSDVLRCEL 808
           VN  G  EVT + LPL++K++GR+VNVSS+ G       A Y SSK  V  FS V+R EL
Sbjct: 191 VNFFGTVEVTKTFLPLLRKSKGRLVNVSSMGGGAPMERLASYGSSKAAVTMFSSVMRLEL 250

Query: 809 QHFGVKVSIVEPGYFRTGMTDVQKSSEAM-KQVWKEVPAHIKDTYGQKFFDAYHDVM 976
             +G+KV+ ++PG F T +       E + K +   +PA +++ YGQ +  A  + +
Sbjct: 251 SKWGIKVASIQPGGFLTNIAGTSDKWEKLEKDILDHLPAEVQEDYGQDYILAQRNFL 307


  Database: RefSeqHP
    Posted date:  Aug 2, 2006 12:57 AM
  Number of letters in database: 17,774,539
  Number of sequences in database:  39,411
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,600,233
Number of Sequences: 39411
Number of extensions: 1088183
Number of successful extensions: 4786
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 3590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4732
length of database: 17,774,539
effective HSP length: 103
effective length of database: 13,715,206
effective search space used: 3689390414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqCP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611C-000288
         (1119 letters)

Database: RefSeqCP 
           33,732 sequences; 19,266,565 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_538239.2| PREDICTED: similar to 3-hydroxysteroid epimeras...   397   e-129
Alignment   gi|XP_858059.1| PREDICTED: similar to 3-hydroxysteroid epimeras...   387   e-126
Alignment   gi|XP_531641.2| PREDICTED: similar to microsomal NAD+-dependent...   320   e-100
Alignment   gi|XP_858182.1| PREDICTED: similar to microsomal NAD+-dependent...   312   1e-97
Alignment   gi|XP_538240.2| PREDICTED: similar to orphan short-chain dehydr...   280   8e-81
Alignment   gi|XP_545513.2| PREDICTED: similar to NADP-dependent retinol de...   245   1e-74
Alignment   gi|XP_538220.2| PREDICTED: similar to 11-cis retinol dehydrogen...   228   2e-69
Alignment   gi|XP_545160.2| PREDICTED: similar to 3-hydroxybutyrate dehydro...   170   3e-42
Alignment   gi|XP_546810.2| PREDICTED: similar to hydroxysteroid (17-beta) ...   144   1e-34
Alignment   gi|XP_853935.1| PREDICTED: similar to Corticosteroid 11-beta-de...   129   7e-30

>ref|XP_538239.2| PREDICTED: similar to 3-hydroxysteroid epimerase isoform 3 [Canis
            familiaris]
          Length = 317

 Score =  397 bits (1020), Expect(2) = e-129
 Identities = 193/260 (74%), Positives = 217/260 (83%)
 Frame = +2

Query: 227  MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
            MW             RWYRERQ+VSHL DKYVFITGCDSGFGNLLARQLD+RGLRVLAAC
Sbjct: 1    MWWSLAVLVGLYCLLRWYRERQVVSHLHDKYVFITGCDSGFGNLLARQLDLRGLRVLAAC 60

Query: 407  LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
            LTE+GAQQLR QTSDRL+TV+LDVTKTESI AATQWV+ERVGDRGLWGLVNNAG FHP C
Sbjct: 61   LTEKGAQQLRSQTSDRLDTVILDVTKTESILAATQWVEERVGDRGLWGLVNNAGIFHPHC 120

Query: 587  ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSK 766
             +EWLK E ++   KVNL G+ EVTLSMLPL+++A+GRIVNVSSILGR+AFFG  Y SSK
Sbjct: 121  YSEWLKIEAYVDVFKVNLTGLIEVTLSMLPLLRRARGRIVNVSSILGRLAFFGGAYCSSK 180

Query: 767  HGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQ 946
            +GVEAFSD LR EL+HFGVK+SIVEPGYFRTGMT V    E +KQ W+EVP HIK+ YGQ
Sbjct: 181  YGVEAFSDTLRRELRHFGVKISIVEPGYFRTGMTHVAWCLERLKQAWEEVPTHIKEAYGQ 240

Query: 947  KFFDAYHDVMKQGLSSCSTN 1006
            KFFDA+H+ +KQGL  CSTN
Sbjct: 241  KFFDAHHNGVKQGLLKCSTN 260



 Score = 84.0 bits (206), Expect(2) = e-129
 Identities = 38/46 (82%), Positives = 41/46 (89%)
 Frame = +3

Query: 981  KGCLVVAQTLNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            +G L  +  LNLVTDCMEHALTSVHPRTRYSAGWD+QFFFIPLSYL
Sbjct: 252  QGLLKCSTNLNLVTDCMEHALTSVHPRTRYSAGWDSQFFFIPLSYL 297


>ref|XP_858059.1| PREDICTED: similar to 3-hydroxysteroid epimerase isoform 4 [Canis
            familiaris]
          Length = 323

 Score =  387 bits (993), Expect(2) = e-126
 Identities = 191/266 (71%), Positives = 216/266 (81%), Gaps = 6/266 (2%)
 Frame = +2

Query: 227  MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
            MW             RWYRERQ+VSHL DKYVFITGCDSGFGNLLARQLD+RGLRVLAAC
Sbjct: 1    MWWSLAVLVGLYCLLRWYRERQVVSHLHDKYVFITGCDSGFGNLLARQLDLRGLRVLAAC 60

Query: 407  LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
            LTE+GAQQLR QTSDRL+TV+LDVTKTESI AATQWV+ERVGDRGLWGLVNNAG FHP C
Sbjct: 61   LTEKGAQQLRSQTSDRLDTVILDVTKTESILAATQWVEERVGDRGLWGLVNNAGIFHPHC 120

Query: 587  ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSK 766
             +EWLK E ++   KVNL G+ EVTLSMLPL+++A+GRIVNVSSILGR+AFFG  Y SSK
Sbjct: 121  YSEWLKIEAYVDVFKVNLTGLIEVTLSMLPLLRRARGRIVNVSSILGRLAFFGGAYCSSK 180

Query: 767  HGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQ 946
            +GVEAFSD LR EL+HFGVK+SIVEPGYFRTGMT V    E +KQ W+EVP HIK+ YGQ
Sbjct: 181  YGVEAFSDTLRRELRHFGVKISIVEPGYFRTGMTHVAWCLERLKQAWEEVPTHIKEAYGQ 240

Query: 947  KFFDAY------HDVMKQGLSSCSTN 1006
            KFF ++      H+ +KQGL  CSTN
Sbjct: 241  KFFASFLFLYTDHNGVKQGLLKCSTN 266



 Score = 84.0 bits (206), Expect(2) = e-126
 Identities = 38/46 (82%), Positives = 41/46 (89%)
 Frame = +3

Query: 981  KGCLVVAQTLNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            +G L  +  LNLVTDCMEHALTSVHPRTRYSAGWD+QFFFIPLSYL
Sbjct: 258  QGLLKCSTNLNLVTDCMEHALTSVHPRTRYSAGWDSQFFFIPLSYL 303


>ref|XP_531641.2| PREDICTED: similar to microsomal NAD+-dependent retinol dehydrogenase
            4 isoform 1 [Canis familiaris]
          Length = 317

 Score =  320 bits (820), Expect(2) = e-100
 Identities = 157/260 (60%), Positives = 195/260 (75%)
 Frame = +2

Query: 227  MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
            MW             RWYRERQ+VSHL DKYVFITGCDSGFGNLLARQLD+RGLRVLAAC
Sbjct: 1    MWWSLAVLVGLYYLLRWYRERQVVSHLQDKYVFITGCDSGFGNLLARQLDLRGLRVLAAC 60

Query: 407  LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
            LTE+GAQQLR QTSDRL+TV+LDVTKTESI AATQWV+E VGDRGLWGLVNNAG   P  
Sbjct: 61   LTEKGAQQLRSQTSDRLDTVILDVTKTESILAATQWVEEHVGDRGLWGLVNNAGISWPTA 120

Query: 587  ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSK 766
              EWL  + ++  L VNL+G+ EVTLS+L LV+KA+GR+VNVSSI+GR++  G  Y  SK
Sbjct: 121  PNEWLTKDDFMKILDVNLLGLVEVTLSLLSLVRKARGRVVNVSSIMGRLSLCGGGYCISK 180

Query: 767  HGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQ 946
            +GVEAFSD LR EL +FGVKV+++EPGYF T +T+ +K S   ++ W  +   +++ YG+
Sbjct: 181  YGVEAFSDSLRRELTYFGVKVAVIEPGYFSTNVTNPEKISRGFQETWDRLSPEVREAYGE 240

Query: 947  KFFDAYHDVMKQGLSSCSTN 1006
            +F  +    +++  S C TN
Sbjct: 241  EFLASARKPIEKLKSMCDTN 260



 Score = 63.5 bits (153), Expect(2) = e-100
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = +3

Query: 1008 LNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            L LVT+CMEHALT+ HPRTRYS GWDA+  ++P+SYL
Sbjct: 261  LYLVTNCMEHALTACHPRTRYSPGWDAKLLYLPMSYL 297


>ref|XP_858182.1| PREDICTED: similar to microsomal NAD+-dependent retinol
           dehydrogenase 4 isoform 2 [Canis familiaris]
          Length = 319

 Score =  312 bits (800), Expect(2) = 1e-97
 Identities = 152/241 (63%), Positives = 186/241 (77%)
 Frame = +2

Query: 227 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
           MW             RWYRERQ+VSHL DKYVFITGCDSGFGNLLARQLD+RGLRVLAAC
Sbjct: 1   MWWSLAVLVGLYYLLRWYRERQVVSHLQDKYVFITGCDSGFGNLLARQLDLRGLRVLAAC 60

Query: 407 LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
           LTE+GAQQLR QTSDRL+TV+LDVTKTESI AATQWV+E VGDRGLWGLVNNAG   P  
Sbjct: 61  LTEKGAQQLRSQTSDRLDTVILDVTKTESILAATQWVEEHVGDRGLWGLVNNAGISWPTA 120

Query: 587 ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSK 766
             EWL  + ++  L VNL+G+ EVTLS+L LV+KA+GR+VNVSSI+GR++  G  Y  SK
Sbjct: 121 PNEWLTKDDFMKILDVNLLGLVEVTLSLLSLVRKARGRVVNVSSIMGRLSLCGGGYCISK 180

Query: 767 HGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQ 946
           +GVEAFSD LR EL +FGVKV+++EPGYF T +T+ +K S   ++ W  +   +++ YG+
Sbjct: 181 YGVEAFSDSLRRELTYFGVKVAVIEPGYFSTNVTNPEKISRGFQETWDRLSPEVREAYGE 240

Query: 947 K 949
           +
Sbjct: 241 E 241



 Score = 63.5 bits (153), Expect(2) = 1e-97
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = +3

Query: 1008 LNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            L LVT+CMEHALT+ HPRTRYS GWDA+  ++P+SYL
Sbjct: 263  LYLVTNCMEHALTACHPRTRYSPGWDAKLLYLPMSYL 299


>ref|XP_538240.2| PREDICTED: similar to orphan short-chain dehydrogenase / reductase
           [Canis familiaris]
          Length = 313

 Score =  280 bits (717), Expect(2) = 8e-81
 Identities = 138/241 (57%), Positives = 179/241 (74%)
 Frame = +2

Query: 272 RWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEQGAQQLRKQTSD 451
           RW +   +V +L DKYVFITGCDSGFGNLLARQL  RG+RVLAAC TE+GAQ+L++ TS 
Sbjct: 12  RWLKNCNLVRNLSDKYVFITGCDSGFGNLLARQLVNRGMRVLAACFTEEGAQKLQRDTSY 71

Query: 452 RLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLCITEWLKTETWIHTLK 631
           RL+T LLDVT+TESI AATQWV+++VG++GLW LVNNAG   P    EWL  E ++  + 
Sbjct: 72  RLQTTLLDVTRTESIQAATQWVRDQVGEQGLWALVNNAGIGLPSGPNEWLTKEDFVKVIN 131

Query: 632 VNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSKHGVEAFSDVLRCELQ 811
           VNL+G+ EVTL MLP+VKKA+GR+VN+SS  GRVA  G  Y  SK GVEAFSD +R EL 
Sbjct: 132 VNLVGLIEVTLHMLPMVKKARGRVVNMSSSGGRVALIGGGYCVSKFGVEAFSDSIRRELH 191

Query: 812 HFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQKFFDAYHDVMKQGLS 991
           +FGVKVSI+EPG +RT +   +     M+++W+ +P   KD+YG+++F  Y D +K  + 
Sbjct: 192 YFGVKVSIIEPGNYRTSILGKEDMVSRMRKLWERLPQETKDSYGEEYFRNYTDKLKNMMQ 251

Query: 992 S 994
           S
Sbjct: 252 S 252



 Score = 39.7 bits (91), Expect(2) = 8e-81
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +3

Query: 1017 VTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            VT+ MEHA+ S  PR RY+ G DA+  ++PL+ L
Sbjct: 260  VTNSMEHAIVSRSPRVRYNPGLDAKLLYLPLAKL 293


>ref|XP_545513.2| PREDICTED: similar to NADP-dependent retinol dehydrogenase/reductase
            [Canis familiaris]
          Length = 753

 Score =  245 bits (626), Expect(2) = 1e-74
 Identities = 119/240 (49%), Positives = 166/240 (69%), Gaps = 1/240 (0%)
 Frame = +2

Query: 275  WYRERQM-VSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEQGAQQLRKQTSD 451
            W  +RQ+ ++ + DKY+FITGCD+GFGNL AR  D +G  V+AACLTE  +  L+ +TS+
Sbjct: 450  WNYKRQLKIADITDKYIFITGCDTGFGNLAARTFDKKGFHVIAACLTESESTALKAETSE 509

Query: 452  RLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLCITEWLKTETWIHTLK 631
            RL TVLLDVT  E++    QWVK +VG++GLWGL+NNAG    L  T+WL  E +   ++
Sbjct: 510  RLHTVLLDVTDPENVKRTAQWVKNQVGEKGLWGLINNAGVLGVLAPTDWLTVEDYREPIE 569

Query: 632  VNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSKHGVEAFSDVLRCELQ 811
            VNL G+  VTL++LPLVKKA+GRI+NVSSI GR+A  G  Y+ SK+ VE F+D LR +++
Sbjct: 570  VNLFGLISVTLNLLPLVKKARGRIINVSSIGGRLAISGGGYTPSKYAVEGFNDSLRRDMK 629

Query: 812  HFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQKFFDAYHDVMKQGLS 991
             FGV VS +EPG F+TG++D  K++E    +WK +   IK  YG+ + +   D +K   S
Sbjct: 630  AFGVHVSCIEPGLFKTGLSDPIKATEKKLAIWKHLSPDIKQQYGESYIEKSLDKLKDTTS 689



 Score = 54.3 bits (129), Expect(2) = 1e-74
 Identities = 23/37 (62%), Positives = 33/37 (89%)
 Frame = +3

Query: 1008 LNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            L+LV +CM+HALTS+ P+TRY+AG DA+ F+IPLS++
Sbjct: 695  LSLVVECMDHALTSLFPKTRYAAGRDAKTFWIPLSHM 731


>ref|XP_538220.2| PREDICTED: similar to 11-cis retinol dehydrogenase (11-cis RDH)
           [Canis familiaris]
          Length = 339

 Score =  228 bits (581), Expect(2) = 2e-69
 Identities = 120/267 (44%), Positives = 168/267 (62%)
 Frame = +2

Query: 191 LPNKHFSGGPHTMWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQ 370
           LP    SG    MW              W R++Q +    D +VFITGCDSGFG LLA +
Sbjct: 12  LPPAGHSGS--AMWLPLLLGVLLWAVLWWLRDQQSLP-ASDAFVFITGCDSGFGRLLALR 68

Query: 371 LDVRGLRVLAACLTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWG 550
           LD RG RVLA+CLT  GA+ L++  S RL T LLDVT+ +S+  A +WV+  VG+ GL+G
Sbjct: 69  LDQRGFRVLASCLTPAGAEDLQRVASSRLHTTLLDVTEPQSVQRAAKWVETHVGEAGLFG 128

Query: 551 LVNNAGTFHPLCITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGR 730
           LVNNAG    +  T WL  + +   L VN +G   VTL++LPL+++++GR+VN+SS+LGR
Sbjct: 129 LVNNAGVAGIIGPTPWLTQDDFHRVLNVNTLGPIRVTLALLPLLQQSRGRVVNISSVLGR 188

Query: 731 VAFFGAVYSSSKHGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWK 910
           +A  G  Y  SK G+EAFSD LR ++ HFGV+VSIVEPG+FRT +T+++     +++ W 
Sbjct: 189 LAANGGGYCVSKFGLEAFSDSLRRDVAHFGVRVSIVEPGFFRTPVTNLEHLENTLQECWA 248

Query: 911 EVPAHIKDTYGQKFFDAYHDVMKQGLS 991
            +P   +  YG+ F   Y  V +  +S
Sbjct: 249 RLPPSTQAHYGEAFLPKYLQVQQHIMS 275



 Score = 53.9 bits (128), Expect(2) = 2e-69
 Identities = 23/43 (53%), Positives = 31/43 (72%)
 Frame = +3

Query: 990  LVVAQTLNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            L+    L  V+ C+EHALT+ +PRTRYS GWDA+  ++P SYL
Sbjct: 276  LICDPDLTKVSRCLEHALTARYPRTRYSPGWDAKLLWLPASYL 318


>ref|XP_545160.2| PREDICTED: similar to 3-hydroxybutyrate dehydrogenase precursor
            [Canis familiaris]
          Length = 299

 Score =  170 bits (430), Expect = 3e-42
 Identities = 109/286 (38%), Positives = 158/286 (55%), Gaps = 16/286 (5%)
 Frame = +2

Query: 293  MVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEQ----GAQQLRKQTSDRLE 460
            ++  +G K V +TGCDSGFG  LA+ L  +G  V A CL +     G ++L    SDRL 
Sbjct: 5    LLKQVGSKAVLVTGCDSGFGFSLAKHLHSKGFLVFAGCLMKDQGGDGVKELDGLKSDRLR 64

Query: 461  TVLLDVTKTESIAAATQWVKERVGD--RGLWGLVNNAG--TFHPLCITEWLKTETWIHTL 628
            T+ L+V K E +    + V+  + D  +G+WGLVNNAG  TF  +   E+   ET+    
Sbjct: 65   TIQLNVCKGEEVERVVEVVRSSLEDPEKGMWGLVNNAGISTFGEV---EFTSMETYKEVA 121

Query: 629  KVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAF-FGAVYSSSKHGVEAFSDVLRCE 805
            +VNL G  ++T + LPL+++A+GRIVN+SS+LGR+A    + Y  +K GVEAFSD LR E
Sbjct: 122  EVNLWGTVQMTKAFLPLIRRARGRIVNISSMLGRMANPARSPYCITKFGVEAFSDCLRYE 181

Query: 806  LQHFGVKVSIVEPGYF--RTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQKFFDAYHDVMK 979
            +   GVKVS+VEPG F   T + + ++      ++W E+P  ++  YG+K+FD     M+
Sbjct: 182  MYPLGVKVSVVEPGNFIAATSLYNPERIQAIADKMWDELPEVVRKDYGRKYFDEKIARMQ 241

Query: 980  QGLSSCSTNPEP-----GHGLHGTRSDICASPHSVLSWLGCSIFLH 1102
               +S ST+  P      H L          P     WL   I  H
Sbjct: 242  AYCNSGSTDISPVVSAVTHALTSRSPYTRYHPMDYYWWLRMQIMTH 287


>ref|XP_546810.2| PREDICTED: similar to hydroxysteroid (17-beta) dehydrogenase 2 [Canis
            familiaris]
          Length = 382

 Score =  144 bits (364), Expect = 1e-34
 Identities = 89/250 (35%), Positives = 137/250 (54%), Gaps = 4/250 (1%)
 Frame = +2

Query: 278  YRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEQG--AQQLRKQTSD 451
            Y   Q +  +  K V ITG DSGFG+ L++ LD  G  V    L E+G  A++LR+  S 
Sbjct: 72   YLSGQELLPVDQKAVLITGGDSGFGHALSKYLDELGFTVFVGVLDEKGSGAEELRRTCSK 131

Query: 452  RLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLCITEWLKTETWIHTLK 631
            RL  + +D+T  + I  A   V E++ DRGLW +VNNAG        E +    +   + 
Sbjct: 132  RLSVLQMDITDQQQIKDAHSKVVEKLQDRGLWAVVNNAGIICLPADGELIPMTDYKKCMA 191

Query: 632  VNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFG-AVYSSSKHGVEAFSDVLRCEL 808
            VN  G  EVT + LPL++K++GR+VN+SS+   V     A YSSSK  +  FS V+R EL
Sbjct: 192  VNFFGAVEVTKAFLPLLRKSKGRLVNISSMAAGVPMEKLAAYSSSKAALTMFSAVMRQEL 251

Query: 809  QHFGVKVSIVEPGYFRTGMTDVQKS-SEAMKQVWKEVPAHIKDTYGQKFFDAYHDVMKQG 985
              +GVKVS+++PG FRT +    +  S+  K +   + + +++ YG+ +     + +K  
Sbjct: 252  SKWGVKVSVIQPGGFRTNIAGTSEMWSKLEKNILDHLSSDVEEDYGKDYILQQRNYLKSI 311

Query: 986  LSSCSTNPEP 1015
                +T+  P
Sbjct: 312  NIKTNTDISP 321


>ref|XP_853935.1| PREDICTED: similar to Corticosteroid 11-beta-dehydrogenase, isozyme
           2 (11-DH2) (11-beta-hydroxysteroid dehydrogenase type 2)
           (11-beta-HSD2) (NAD-dependent 11-beta-hydroxysteroid
           dehydrogenase) [Canis familiaris]
          Length = 323

 Score =  129 bits (323), Expect = 7e-30
 Identities = 76/215 (35%), Positives = 115/215 (53%), Gaps = 4/215 (1%)
 Frame = +2

Query: 335 CDSGFGNLLARQLDVRGLRVLAACLTEQG--AQQLRKQTSDRLETVLLDVTKTESIAAAT 508
           CDSGFG   A++LD  G  VLA  L   G  A +LR   S RL  + +D+TK   I+ A 
Sbjct: 8   CDSGFGKETAKKLDAMGFTVLATVLELDGPGALELRACCSPRLRLLQMDLTKPADISRAL 67

Query: 509 QWVKERVGDRGLWGLVNNAGTFHPLCITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKK 688
           ++ K      GLWGLVNNAG    +   E     T+   ++VN  G  E+T  +LPL+++
Sbjct: 68  EFTKAHTSSTGLWGLVNNAGHNDVVADVELSPVATFRSCMEVNFFGALELTKGLLPLLRR 127

Query: 689 AQGRIVNVSSILGRVAF-FGAVYSSSKHGVEAFSDVLRCELQHFGVKVSIVEPGYFRT-G 862
           ++GRIV V S  G + +   A Y +SK  +    D   CEL  +GVKVS+++PG F+T  
Sbjct: 128 SRGRIVTVGSPAGDMPYPCLAAYGTSKAAMALLMDTFSCELLPWGVKVSVIQPGCFKTES 187

Query: 863 MTDVQKSSEAMKQVWKEVPAHIKDTYGQKFFDAYH 967
           + +V    +  + +   +P  +   YG+ + +  H
Sbjct: 188 VRNVGHWEQRKQLLLASLPRELLQAYGEDYIEHLH 222


  Database: RefSeqCP
    Posted date:  Aug 1, 2006  9:25 PM
  Number of letters in database: 19,266,565
  Number of sequences in database:  33,732
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,174,091
Number of Sequences: 33732
Number of extensions: 1093425
Number of successful extensions: 4659
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 3689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4620
length of database: 19,266,565
effective HSP length: 104
effective length of database: 15,758,437
effective search space used: 4223261116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqMP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611C-000288
         (1119 letters)

Database: RefSeqMP 
           45,328 sequences; 21,768,885 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_038814.1| hydroxysteroid (17-beta) dehydrogenase 9 [Mus m...   353   e-114
Alignment   gi|NP_059501.1| retinol dehydrogenase 7 [Mus musculus]               313   2e-99
Alignment   gi|NP_536684.1| retinol dehydrogenase 1 (all trans) [Mus musculus]   310   4e-99
Alignment   gi|NP_671755.1| retinol dehydrogenase similar protein 2 [Mus mu...   305   2e-98
Alignment   gi|NP_694773.1| retinol dehydrogenase 9 [Mus musculus]               306   6e-98
Alignment   gi|NP_033066.1| retinol dehydrogenase 16 [Mus musculus]              307   2e-97
Alignment   gi|NP_663399.1| cis-retinol/3alpha hydroxysterol short-chain de...   296   9e-95
Alignment   gi|NP_081577.1| retinol dehydrogenase similar protein [Mus musc...   266   1e-75
Alignment   gi|NP_780721.1| NADP-dependent retinol dehydrogenase/reductase ...   246   3e-74
Alignment   gi|NP_598767.1| retinol dehydrogenase 5 [Mus musculus]               224   1e-69

>ref|NP_038814.1| hydroxysteroid (17-beta) dehydrogenase 9 [Mus musculus]
          Length = 317

 Score =  353 bits (905), Expect(2) = e-114
 Identities = 175/260 (67%), Positives = 203/260 (78%)
 Frame = +2

Query: 227  MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
            MW             RWYRERQ+VSHL DKYVFITGCDSGFGNLLARQLD RG+RVLAAC
Sbjct: 1    MWFYLVTLVGLYHLLRWYRERQVVSHLQDKYVFITGCDSGFGNLLARQLDRRGMRVLAAC 60

Query: 407  LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
            LTE+GA++LR +TSDRLETV+LDVTKTESI AATQWVKERVGDRGLWGLVNNAG   P  
Sbjct: 61   LTEKGAEELRNKTSDRLETVILDVTKTESIVAATQWVKERVGDRGLWGLVNNAGVLQPFA 120

Query: 587  ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSK 766
              EW + E ++   +VNLIG+T+VT+SML LVKKA+GRIVNVSS LGRVA FG  YS SK
Sbjct: 121  YIEWYRPEDYMPIFQVNLIGLTQVTISMLFLVKKARGRIVNVSSALGRVALFGGFYSCSK 180

Query: 767  HGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQ 946
            +GVEAFSDVLR E+Q FGVKVSI+EPG F+T MTD + + E  K+VW+  P HIK++YGQ
Sbjct: 181  YGVEAFSDVLRHEVQDFGVKVSIIEPGSFKTEMTDAELTIERTKKVWEAAPEHIKESYGQ 240

Query: 947  KFFDAYHDVMKQGLSSCSTN 1006
            +FFD +    K+ L  CS N
Sbjct: 241  QFFDDFCSTTKRELMKCSRN 260



 Score = 78.2 bits (191), Expect(2) = e-114
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +3

Query: 999  AQTLNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            ++ L+LVTDCMEHALTS HPRTRYSAGWDA+FFFIPLSYL
Sbjct: 258  SRNLSLVTDCMEHALTSTHPRTRYSAGWDAKFFFIPLSYL 297


>ref|NP_059501.1| retinol dehydrogenase 7 [Mus musculus]
          Length = 316

 Score =  313 bits (801), Expect(2) = 2e-99
 Identities = 155/258 (60%), Positives = 198/258 (76%)
 Frame = +2

Query: 227  MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
            MW             R++RERQ+VSHL DKYVFITGCDSGFGNLLARQLD RG+RVLAAC
Sbjct: 1    MWLYLVALVGLWTLLRFFRERQVVSHLQDKYVFITGCDSGFGNLLARQLDRRGMRVLAAC 60

Query: 407  LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
            LTE+GA+QLR +TSDRLETV+LDVTKTESI AATQWVKERVG+RGLWGLVNNAG      
Sbjct: 61   LTEKGAEQLRNKTSDRLETVILDVTKTESIVAATQWVKERVGNRGLWGLVNNAG-ICVFA 119

Query: 587  ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSK 766
            I EWLK E + + L VNL+G+ EVTLSMLPLV+KA+GR+VN+SS +GRV+  G  Y  SK
Sbjct: 120  INEWLKKEDFANILDVNLLGMIEVTLSMLPLVRKARGRVVNISSSMGRVSLCGGGYCISK 179

Query: 767  HGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQ 946
            +GVEAFSD LR E+ +FGVKV+I+EPG FRT +++ ++ S +++++W +  + +K+ Y +
Sbjct: 180  YGVEAFSDSLRREISYFGVKVAIIEPGGFRTNVSNYERLSHSIEKLWDQTSSEVKEVYDK 239

Query: 947  KFFDAYHDVMKQGLSSCS 1000
             F D+Y   ++    +CS
Sbjct: 240  NFLDSYIKAIQSLTDTCS 257



 Score = 69.7 bits (169), Expect(2) = 2e-99
 Identities = 28/37 (75%), Positives = 35/37 (94%)
 Frame = +3

Query: 1008 LNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            L++VTDCMEHALT+ HPRTRYSAGWDA+ F++PLSY+
Sbjct: 260  LSVVTDCMEHALTACHPRTRYSAGWDAKLFYLPLSYM 296


>ref|NP_536684.1| retinol dehydrogenase 1 (all trans) [Mus musculus]
          Length = 317

 Score =  310 bits (795), Expect(2) = 4e-99
 Identities = 154/246 (62%), Positives = 189/246 (76%)
 Frame = +2

Query: 227 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
           MW             R++RERQ+VSHL  KYVFITGCDSGFGNLLARQLD RG+RVLAAC
Sbjct: 1   MWLYLVALVGLWTLLRFFRERQVVSHLQVKYVFITGCDSGFGNLLARQLDRRGMRVLAAC 60

Query: 407 LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
           LTE+GA++LR +TSDRLETV+LDVTKTESI AATQWVKERVG+RGLWGLVNNAG   P  
Sbjct: 61  LTEKGAEELRNKTSDRLETVILDVTKTESIVAATQWVKERVGNRGLWGLVNNAGISTPSG 120

Query: 587 ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSK 766
             EW+K + +   L VNL+G+ EVTLSMLPLV+KA+GR+VNVSS++GR++FFG  Y  SK
Sbjct: 121 PNEWMKKQDFARVLDVNLLGMIEVTLSMLPLVRKARGRVVNVSSVMGRMSFFGGGYCISK 180

Query: 767 HGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQ 946
           +GVEAFSD LR EL +FGVKV+I+EPG F+T +T   + S   K +W +  + +K+ YG+
Sbjct: 181 YGVEAFSDSLRRELSYFGVKVAIIEPGGFKTCVTSSDRLSSNTKMIWDKASSEVKEIYGE 240

Query: 947 KFFDAY 964
           KF   Y
Sbjct: 241 KFLLFY 246



 Score = 70.9 bits (172), Expect(2) = 4e-99
 Identities = 30/37 (81%), Positives = 35/37 (94%)
 Frame = +3

Query: 1008 LNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            L++VTDCMEHALT+ HPRTRYSAGWDA+F F+PLSYL
Sbjct: 261  LSVVTDCMEHALTARHPRTRYSAGWDAKFLFLPLSYL 297


>ref|NP_671755.1| retinol dehydrogenase similar protein 2 [Mus musculus]
          Length = 318

 Score =  305 bits (782), Expect(2) = 2e-98
 Identities = 152/247 (61%), Positives = 190/247 (76%), Gaps = 1/247 (0%)
 Frame = +2

Query: 227 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
           MW             R++RERQ+VSHL DKYVFITGCDSGFGNLLARQLD RG+RVLAAC
Sbjct: 1   MWLYLVPLVGLWTLLRFFRERQVVSHLQDKYVFITGCDSGFGNLLARQLDRRGMRVLAAC 60

Query: 407 LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
           LTE+GA++LR +TSDRLETV+LDVTKTESI AATQWVKERVG+RGLWGLVNNAG   PL 
Sbjct: 61  LTEKGAEELRNKTSDRLETVILDVTKTESIVAATQWVKERVGNRGLWGLVNNAGISVPLG 120

Query: 587 ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFG-AVYSSS 763
           +++W+  + +   L VNL+G+ EVTL+MLPLV+KA+GR+VNVSSI+GRV+  G   Y  S
Sbjct: 121 LSQWMNKQNFASVLDVNLLGMIEVTLTMLPLVRKARGRVVNVSSIMGRVSLHGNGGYCIS 180

Query: 764 KHGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYG 943
           K+GVEAFSD LR EL +FGVKV+I+EPG+F TGM    + S   + +W +  + I++ YG
Sbjct: 181 KYGVEAFSDSLRRELSYFGVKVAIIEPGFFLTGMASSARLSSNTQMLWDQTSSEIREIYG 240

Query: 944 QKFFDAY 964
           +K+   Y
Sbjct: 241 EKYLAFY 247



 Score = 73.6 bits (179), Expect(2) = 2e-98
 Identities = 32/37 (86%), Positives = 35/37 (94%)
 Frame = +3

Query: 1008 LNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            L+LVTDCMEHALT+ HPRTRYSAGWDA+ FFIPLSYL
Sbjct: 262  LSLVTDCMEHALTACHPRTRYSAGWDAKLFFIPLSYL 298


>ref|NP_694773.1| retinol dehydrogenase 9 [Mus musculus]
          Length = 317

 Score =  306 bits (783), Expect(2) = 6e-98
 Identities = 149/246 (60%), Positives = 188/246 (76%)
 Frame = +2

Query: 227 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
           MW              ++RERQ+VS+L DKYVFITGCDSGFGNLLARQLD RG+RVLAAC
Sbjct: 1   MWLFLVALVGLWTLLCFFRERQVVSYLQDKYVFITGCDSGFGNLLARQLDRRGMRVLAAC 60

Query: 407 LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
           LTE+GA++LR +TSDRLETV+LDVTKTESI  ATQWVKERVG+RGLWGLVNNAG   P  
Sbjct: 61  LTEKGAEELRNKTSDRLETVILDVTKTESIVTATQWVKERVGNRGLWGLVNNAGISIPSG 120

Query: 587 ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSK 766
             EW+K + + H L VNL+G+ EVTLSMLPLV+KA+GR++NV+S+LGRV+  G  Y  SK
Sbjct: 121 PNEWMKKQDFAHVLDVNLLGLIEVTLSMLPLVRKARGRVINVASVLGRVSLCGGAYCISK 180

Query: 767 HGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQ 946
           +GVEAFSD LR EL +FGVKV+I+EPG+F TG+T   +     + +W +  + I++ YG+
Sbjct: 181 YGVEAFSDSLRRELSYFGVKVAIIEPGFFLTGVTSSARLCSNTQMLWDQTSSEIREIYGE 240

Query: 947 KFFDAY 964
           K+  +Y
Sbjct: 241 KYLASY 246



 Score = 71.6 bits (174), Expect(2) = 6e-98
 Identities = 30/37 (81%), Positives = 35/37 (94%)
 Frame = +3

Query: 1008 LNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            L+LVTDCMEHALT+ HPRTRYSAGWDA+ F++PLSYL
Sbjct: 261  LSLVTDCMEHALTACHPRTRYSAGWDAKLFYLPLSYL 297


>ref|NP_033066.1| retinol dehydrogenase 16 [Mus musculus]
          Length = 317

 Score =  307 bits (787), Expect(2) = 2e-97
 Identities = 150/246 (60%), Positives = 187/246 (76%)
 Frame = +2

Query: 227 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
           MW             R++R RQ+VSHL DKYVFITGCDSGFG LLARQLD RG+RVLAAC
Sbjct: 1   MWLYLVALVGLWTLLRFFRVRQVVSHLQDKYVFITGCDSGFGTLLARQLDRRGMRVLAAC 60

Query: 407 LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
           LTE+GA++LR +TSDRLETV+LDVTKTESI  ATQWVKE VG+RGLWGLVNNAG   P  
Sbjct: 61  LTEKGAEELRNKTSDRLETVILDVTKTESIVTATQWVKEHVGNRGLWGLVNNAGISTPSG 120

Query: 587 ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSK 766
             EW+K + + H L VNL+G+ EVTLSMLPLV+KA+GR+VNVSS++GRV+ FG  Y  SK
Sbjct: 121 PNEWMKKQDFAHVLDVNLLGMIEVTLSMLPLVRKARGRVVNVSSVMGRVSLFGGGYCISK 180

Query: 767 HGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQ 946
           +GVEAFSD LR EL +FGVKV+I+EPG+F TG+T   +     + +W +  + I++ YG+
Sbjct: 181 YGVEAFSDSLRRELSYFGVKVAIIEPGFFLTGVTSSARLCSNTQMLWDQTSSEIREIYGE 240

Query: 947 KFFDAY 964
           K+  +Y
Sbjct: 241 KYLASY 246



 Score = 68.6 bits (166), Expect(2) = 2e-97
 Identities = 29/37 (78%), Positives = 34/37 (91%)
 Frame = +3

Query: 1008 LNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            L+ VTDCMEHALT+ HPRTRYSAGWDA+ F++PLSYL
Sbjct: 261  LSGVTDCMEHALTACHPRTRYSAGWDAKLFYLPLSYL 297


>ref|NP_663399.1| cis-retinol/3alpha hydroxysterol short-chain dehydrogenase-like
           [Mus musculus]
          Length = 318

 Score =  296 bits (758), Expect(2) = 9e-95
 Identities = 148/247 (59%), Positives = 188/247 (76%), Gaps = 1/247 (0%)
 Frame = +2

Query: 227 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 406
           MW             R++RERQ+V HL DKYVFITGC SGFGNLLARQLD RG+RVLAAC
Sbjct: 1   MWLYMVALLGLWMLLRFFRERQVVDHLQDKYVFITGCGSGFGNLLARQLDRRGMRVLAAC 60

Query: 407 LTEQGAQQLRKQTSDRLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLC 586
             E+GA++LR++TS+RLETV+LDVTKTESI AATQWVKERVG+RGLWGLVNNAG   P  
Sbjct: 61  RKEEGAEELRRKTSERLETVILDVTKTESIVAATQWVKERVGNRGLWGLVNNAGISVPSG 120

Query: 587 ITEWLKTETWIHTLKVNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGA-VYSSS 763
             EW+K + +   L VNL+G+ EVTLSMLPLV+KA+GR+VNVSSILGRV+  G+  Y  S
Sbjct: 121 PNEWMKKQDFASVLDVNLLGLIEVTLSMLPLVRKARGRVVNVSSILGRVSLGGSGGYCIS 180

Query: 764 KHGVEAFSDVLRCELQHFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYG 943
           K+G+EAFSD LR EL++FGVKV+I+EPG+F TGM    +    ++ +W +  + I++ YG
Sbjct: 181 KYGIEAFSDSLRRELRYFGVKVAIIEPGFFLTGMASSARLCSNIQMLWDQTSSEIREIYG 240

Query: 944 QKFFDAY 964
           +K+  +Y
Sbjct: 241 EKYLASY 247



 Score = 70.5 bits (171), Expect(2) = 9e-95
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +3

Query: 1008 LNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            L++VTDCMEHALT+ HPRTRYSAGWDA+ FF PLSYL
Sbjct: 262  LSVVTDCMEHALTACHPRTRYSAGWDAKLFFTPLSYL 298


>ref|NP_081577.1| retinol dehydrogenase similar protein [Mus musculus]
          Length = 313

 Score =  266 bits (679), Expect(2) = 1e-75
 Identities = 124/231 (53%), Positives = 173/231 (74%)
 Frame = +2

Query: 272 RWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEQGAQQLRKQTSD 451
           RW++   +V +L +KYVFITGCDSGFGNLLA+QL  RG++VLAACLTE+GAQ+L + TS 
Sbjct: 12  RWFKNCNLVKNLSEKYVFITGCDSGFGNLLAKQLVDRGMKVLAACLTEEGAQKLLQDTSH 71

Query: 452 RLETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLCITEWLKTETWIHTLK 631
           +L+T LLDVTK+E++  A QWV+++VG++GLW LVNNAG   P    EWL  + ++  + 
Sbjct: 72  QLQTFLLDVTKSENVKEAAQWVRDQVGEQGLWALVNNAGVGLPSGPNEWLTIKDFVKVIN 131

Query: 632 VNLIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSKHGVEAFSDVLRCELQ 811
           +NL+G+ +VTL+MLP++KKA+GR+VN+SS  GRVA FG  Y  SK GVEAFSD +R EL 
Sbjct: 132 INLVGLIDVTLNMLPMIKKARGRVVNMSSSGGRVAIFGGGYCVSKFGVEAFSDSIRRELH 191

Query: 812 HFGVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQKFFDAY 964
            FGVKVSI+EPG ++T +   +     MK++W  +P   +D+YG+++F  Y
Sbjct: 192 FFGVKVSIIEPGNYKTSILGQEALESRMKKLWDRLPQETRDSYGEEYFQTY 242



 Score = 37.0 bits (84), Expect(2) = 1e-75
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = +3

Query: 1017 VTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            VT+ MEHA+ S  PR RY+ G D +F ++ L+ L
Sbjct: 260  VTNSMEHAIVSRSPRIRYNPGLDVKFLYLTLAKL 293


>ref|NP_780721.1| NADP-dependent retinol dehydrogenase/reductase [Mus musculus]
          Length = 319

 Score =  246 bits (628), Expect(2) = 3e-74
 Identities = 119/239 (49%), Positives = 164/239 (68%)
 Frame = +2

Query: 278 YRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEQGAQQLRKQTSDRL 457
           Y+ +  ++ + DKYVFITGCD+GFGNL AR  D +G RV+AACLTE G+  L+ +TS+RL
Sbjct: 18  YKGQLKIADIADKYVFITGCDTGFGNLAARTFDKKGFRVIAACLTESGSAALKAKTSERL 77

Query: 458 ETVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLCITEWLKTETWIHTLKVN 637
            TVLLDVT  E++    QWVK  VG++GLWGL+NNAG    L  T+WL  + +   ++VN
Sbjct: 78  HTVLLDVTDPENVKKTAQWVKSHVGEKGLWGLINNAGVLGVLAPTDWLTVDDYREPIEVN 137

Query: 638 LIGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSKHGVEAFSDVLRCELQHF 817
           L G+  VTL+MLPLVKKA+GR++NVSSI GR+AF G  Y+ SK+ VE F+D LR +++ F
Sbjct: 138 LFGLINVTLNMLPLVKKARGRVINVSSIGGRLAFGGGGYTPSKYAVEGFNDSLRRDMKAF 197

Query: 818 GVKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQKFFDAYHDVMKQGLSS 994
           GV VS +EPG F+T + D  K++E    +WK +   IK  YG+ + +     +K   SS
Sbjct: 198 GVHVSCIEPGLFKTELADPIKTTEKKLAIWKHLSPDIKQQYGEGYIEKSLHRLKSNTSS 256



 Score = 52.0 bits (123), Expect(2) = 3e-74
 Identities = 23/37 (62%), Positives = 31/37 (83%)
 Frame = +3

Query: 1008 LNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            L+LV  CM+HALTS+ P+TRY AG DA+ F+IPLS++
Sbjct: 261  LSLVVGCMDHALTSLFPKTRYIAGKDAKTFWIPLSHM 297


>ref|NP_598767.1| retinol dehydrogenase 5 [Mus musculus]
          Length = 318

 Score =  224 bits (572), Expect(2) = 1e-69
 Identities = 112/234 (47%), Positives = 158/234 (67%)
 Frame = +2

Query: 281 RERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEQGAQQLRKQTSDRLE 460
           R+RQ +    D ++FITGCDSGFG LLA QLD +G +VLA CLT  GA+ L++  S RL 
Sbjct: 19  RDRQSLP-ASDAFIFITGCDSGFGRLLALQLDQKGFQVLAGCLTPSGAEDLQQMASSRLH 77

Query: 461 TVLLDVTKTESIAAATQWVKERVGDRGLWGLVNNAGTFHPLCITEWLKTETWIHTLKVNL 640
           T LLD+T  +++    +WVK RVG+ GL+GLVNNAG    +  T WL  + +   L VN 
Sbjct: 78  TTLLDITDPQNVQQVAKWVKTRVGETGLFGLVNNAGVAGIIGPTPWLTQDDFQRVLSVNT 137

Query: 641 IGVTEVTLSMLPLVKKAQGRIVNVSSILGRVAFFGAVYSSSKHGVEAFSDVLRCELQHFG 820
           +G   VTL++LPL+++A+GR+VN++S+LGR+A  G  Y  SK G+EAFSD LR ++  FG
Sbjct: 138 LGPIGVTLALLPLLQQARGRVVNITSVLGRIAANGGGYCVSKFGLEAFSDSLRRDMAPFG 197

Query: 821 VKVSIVEPGYFRTGMTDVQKSSEAMKQVWKEVPAHIKDTYGQKFFDAYHDVMKQ 982
           V+VSIVEPG+FRT +T+++     +K  W  +P  I+  YG+ F D Y  V ++
Sbjct: 198 VQVSIVEPGFFRTPVTNLESLESTLKACWARLPPAIQAHYGEAFLDTYLRVQRR 251



 Score = 58.5 bits (140), Expect(2) = 1e-69
 Identities = 25/43 (58%), Positives = 31/43 (72%)
 Frame = +3

Query: 990  LVVAQTLNLVTDCMEHALTSVHPRTRYSAGWDAQFFFIPLSYL 1118
            L+    L  VT C+EHALT+ HPRTRYS GWDA+  ++P SYL
Sbjct: 255  LICDPELTKVTSCLEHALTARHPRTRYSPGWDAKLLWLPASYL 297


  Database: RefSeqMP
    Posted date:  Aug 2, 2006 12:58 AM
  Number of letters in database: 21,768,885
  Number of sequences in database:  45,328
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,112,090
Number of Sequences: 45328
Number of extensions: 1275302
Number of successful extensions: 5159
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 4063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5107
length of database: 21,768,885
effective HSP length: 105
effective length of database: 17,009,445
effective search space used: 4541521815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)