Search to RefSeqCP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611C-000542
(1230 letters)
Database: RefSeqCP
33,732 sequences; 19,266,565 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_866115.1| PREDICTED: similar to clathrin, light polypepti... 365 e-101
Alignment gi|XP_546220.2| PREDICTED: similar to Clathrin light chain B (L... 354 9e-98
Alignment gi|XP_866083.1| PREDICTED: similar to clathrin, light polypepti... 350 2e-96
Alignment gi|XP_866050.1| PREDICTED: similar to clathrin, light polypepti... 333 2e-91
Alignment gi|XP_866066.1| PREDICTED: similar to clathrin, light polypepti... 328 7e-90
Alignment gi|XP_866787.1| PREDICTED: similar to clathrin, light polypepti... 230 2e-60
Alignment gi|XP_866825.1| PREDICTED: similar to Clathrin light chain A (L... 219 3e-57
Alignment gi|XP_866761.1| PREDICTED: similar to Clathrin light chain A (L... 219 6e-57
Alignment gi|XP_531996.2| PREDICTED: similar to Clathrin light chain A (L... 214 1e-55
Alignment gi|XP_866835.1| PREDICTED: similar to clathrin, light polypepti... 192 6e-49
>ref|XP_866115.1| PREDICTED: similar to clathrin, light polypeptide isoform a isoform
5 [Canis familiaris]
Length = 211
Score = 365 bits (938), Expect = e-101
Identities = 184/211 (87%), Positives = 186/211 (88%)
Frame = +2
Query: 221 MADDXXXXXXXXXXXXXXXXXXXXXXFLAQQESEIAGIENDEGFGAPAGSQAALAQPGPA 400
MADD FLAQQESEIAGIENDEGFGAPAGS AALAQPGPA
Sbjct: 1 MADDFGFFSSSESGAPEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAALAQPGPA 60
Query: 401 SGAGPEDMGTTVNGDVFQDANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA 580
GAG EDMGTT+NGDVFQ+ANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA
Sbjct: 61 GGAGSEDMGTTINGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA 120
Query: 581 SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQL 760
SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQL
Sbjct: 121 SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQL 180
Query: 761 CDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 853
CDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR
Sbjct: 181 CDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 211
>ref|XP_546220.2| PREDICTED: similar to Clathrin light chain B (Lcb) isoform 1 [Canis
familiaris]
Length = 229
Score = 354 bits (909), Expect = 9e-98
Identities = 184/229 (80%), Positives = 186/229 (81%), Gaps = 18/229 (7%)
Frame = +2
Query: 221 MADDXXXXXXXXXXXXXXXXXXXXXXFLAQQESEIAGIENDEGFGAPAGSQAALAQPGPA 400
MADD FLAQQESEIAGIENDEGFGAPAGS AALAQPGPA
Sbjct: 1 MADDFGFFSSSESGAPEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAALAQPGPA 60
Query: 401 SGAGPEDMGTTVNGDVFQDANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA 580
GAG EDMGTT+NGDVFQ+ANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA
Sbjct: 61 GGAGSEDMGTTINGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA 120
Query: 581 SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNR------------------ASEEAFV 706
SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNR ASEEAFV
Sbjct: 121 SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFV 180
Query: 707 KESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 853
KESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR
Sbjct: 181 KESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 229
>ref|XP_866083.1| PREDICTED: similar to clathrin, light polypeptide isoform a isoform
4 [Canis familiaris]
Length = 213
Score = 350 bits (897), Expect = 2e-96
Identities = 180/213 (84%), Positives = 182/213 (85%), Gaps = 2/213 (0%)
Frame = +2
Query: 221 MADDXXXXXXXXXXXXXXXXXXXXXXFLAQQESEIAGIENDEGFGAPAGSQAALAQPG-- 394
MADD FLAQQESEIAGIENDEGFGAPAGS AALA
Sbjct: 1 MADDFGFFSSSESGAPEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAALAHASAC 60
Query: 395 PASGAGPEDMGTTVNGDVFQDANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELD 574
P S AG EDMGTT+NGDVFQ+ANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELD
Sbjct: 61 PPSTAGSEDMGTTINGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELD 120
Query: 575 AASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKESKEETPGTEWEKVA 754
AASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKESKEETPGTEWEKVA
Sbjct: 121 AASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKESKEETPGTEWEKVA 180
Query: 755 QLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 853
QLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR
Sbjct: 181 QLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 213
>ref|XP_866050.1| PREDICTED: similar to clathrin, light polypeptide isoform a isoform
2 [Canis familiaris]
Length = 208
Score = 333 bits (855), Expect = 2e-91
Identities = 173/211 (81%), Positives = 177/211 (83%)
Frame = +2
Query: 221 MADDXXXXXXXXXXXXXXXXXXXXXXFLAQQESEIAGIENDEGFGAPAGSQAALAQPGPA 400
MADD FLAQQESEIAGIENDEGFGAPAG+ + GP
Sbjct: 1 MADDFGFFSSSESGAPEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGNSGE--EEGPR 58
Query: 401 SGAGPEDMGTTVNGDVFQDANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA 580
G DMGTT+NGDVFQ+ANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA
Sbjct: 59 YGP-LGDMGTTINGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA 117
Query: 581 SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQL 760
SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQL
Sbjct: 118 SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQL 177
Query: 761 CDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 853
CDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR
Sbjct: 178 CDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 208
>ref|XP_866066.1| PREDICTED: similar to clathrin, light polypeptide isoform a isoform
3 [Canis familiaris]
Length = 207
Score = 328 bits (841), Expect = 7e-90
Identities = 171/211 (81%), Positives = 173/211 (81%)
Frame = +2
Query: 221 MADDXXXXXXXXXXXXXXXXXXXXXXFLAQQESEIAGIENDEGFGAPAGSQAALAQPGPA 400
MADD FLAQQESEIAGIENDEGFG G
Sbjct: 1 MADDFGFFSSSESGAPEAAEEDPAAAFLAQQESEIAGIENDEGFGLSNGYCHVFV----L 56
Query: 401 SGAGPEDMGTTVNGDVFQDANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA 580
S AG EDMGTT+NGDVFQ+ANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA
Sbjct: 57 SLAGSEDMGTTINGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA 116
Query: 581 SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQL 760
SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQL
Sbjct: 117 SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQL 176
Query: 761 CDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 853
CDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR
Sbjct: 177 CDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 207
>ref|XP_866787.1| PREDICTED: similar to clathrin, light polypeptide A isoform a
isoform 3 [Canis familiaris]
Length = 218
Score = 230 bits (586), Expect = 2e-60
Identities = 115/183 (62%), Positives = 137/183 (74%)
Frame = +2
Query: 299 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 478
FLAQQESEIAGIENDE F G G G P+ + +NG+ +Q++NGP D
Sbjct: 35 FLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGV-PDAVDGVMNGEYYQESNGPTDS 93
Query: 479 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 658
YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 94 YAAISQVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 153
Query: 659 VEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQ 838
++K K NNRA+EEAFV + E +PGTEWE+VA+LCDFNPKSSKQ KDVSR+RSVL+SLKQ
Sbjct: 154 LQKTKANNRAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQ 213
Query: 839 TPL 847
PL
Sbjct: 214 APL 216
>ref|XP_866825.1| PREDICTED: similar to Clathrin light chain A (Lca) isoform 6 [Canis
familiaris]
Length = 230
Score = 219 bits (559), Expect = 3e-57
Identities = 114/195 (58%), Positives = 137/195 (70%), Gaps = 12/195 (6%)
Frame = +2
Query: 299 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 478
FLAQQESEIAGIENDE F G G G P+ + +NG+ +Q++NGP D
Sbjct: 35 FLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGV-PDAVDGVMNGEYYQESNGPTDS 93
Query: 479 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 658
YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 94 YAAISQVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 153
Query: 659 VEKNKINN------------RASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDV 802
++K K NN +A+EEAFV + E +PGTEWE+VA+LCDFNPKSSKQ KDV
Sbjct: 154 LQKTKANNSTNINHPCYSLEQAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDV 213
Query: 803 SRLRSVLMSLKQTPL 847
SR+RSVL+SLKQ PL
Sbjct: 214 SRMRSVLISLKQAPL 228
>ref|XP_866761.1| PREDICTED: similar to Clathrin light chain A (Lca) isoform 2 [Canis
familiaris]
Length = 236
Score = 219 bits (557), Expect = 6e-57
Identities = 115/201 (57%), Positives = 137/201 (68%), Gaps = 18/201 (8%)
Frame = +2
Query: 299 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 478
FLAQQESEIAGIENDE F G G G P+ + +NG+ +Q++NGP D
Sbjct: 35 FLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGV-PDAVDGVMNGEYYQESNGPTDS 93
Query: 479 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 658
YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 94 YAAISQVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 153
Query: 659 VEKNKINNR------------------ASEEAFVKESKEETPGTEWEKVAQLCDFNPKSS 784
++K K NNR A+EEAFV + E +PGTEWE+VA+LCDFNPKSS
Sbjct: 154 LQKTKANNRVADEAFYKQPFADVIGYVAAEEAFVNDIDESSPGTEWERVARLCDFNPKSS 213
Query: 785 KQCKDVSRLRSVLMSLKQTPL 847
KQ KDVSR+RSVL+SLKQ PL
Sbjct: 214 KQAKDVSRMRSVLISLKQAPL 234
>ref|XP_531996.2| PREDICTED: similar to Clathrin light chain A (Lca) isoform 1 [Canis
familiaris]
Length = 248
Score = 214 bits (545), Expect = 1e-55
Identities = 115/213 (53%), Positives = 137/213 (64%), Gaps = 30/213 (14%)
Frame = +2
Query: 299 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPASGAGPEDMGTTVNGDVFQDANGPADG 478
FLAQQESEIAGIENDE F G G G P+ + +NG+ +Q++NGP D
Sbjct: 35 FLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPGV-PDAVDGVMNGEYYQESNGPTDS 93
Query: 479 YAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 658
YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ EQ
Sbjct: 94 YAAISQVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQDEQ 153
Query: 659 VEKNKINNR------------------------------ASEEAFVKESKEETPGTEWEK 748
++K K NNR A+EEAFV + E +PGTEWE+
Sbjct: 154 LQKTKANNRVADEAFYKQPFADVIGYVTNINHPCYSLEQAAEEAFVNDIDESSPGTEWER 213
Query: 749 VAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPL 847
VA+LCDFNPKSSKQ KDVSR+RSVL+SLKQ PL
Sbjct: 214 VARLCDFNPKSSKQAKDVSRMRSVLISLKQAPL 246
>ref|XP_866835.1| PREDICTED: similar to clathrin, light polypeptide A isoform a
isoform 7 [Canis familiaris]
Length = 139
Score = 192 bits (488), Expect = 6e-49
Identities = 91/132 (68%), Positives = 109/132 (82%)
Frame = +2
Query: 452 QDANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLE 631
+++NGP D YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LE
Sbjct: 6 RESNGPTDSYAAISQVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELE 65
Query: 632 EWNQRQSEQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRL 811
EW RQ EQ++K K NNRA+EEAFV + E +PGTEWE+VA+LCDFNPKSSKQ KDVSR+
Sbjct: 66 EWYARQDEQLQKTKANNRAAEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRM 125
Query: 812 RSVLMSLKQTPL 847
RSVL+SLKQ PL
Sbjct: 126 RSVLISLKQAPL 137
Database: RefSeqCP
Posted date: Aug 1, 2006 9:25 PM
Number of letters in database: 19,266,565
Number of sequences in database: 33,732
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,116,680
Number of Sequences: 33732
Number of extensions: 1172079
Number of successful extensions: 9800
Number of sequences better than 1.0e-05: 10
Number of HSP's better than 0.0 without gapping: 6117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9521
length of database: 19,266,565
effective HSP length: 105
effective length of database: 15,724,705
effective search space used: 4780310320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqMP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611C-000542
(1230 letters)
Database: RefSeqMP
45,328 sequences; 21,768,885 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_083146.1| clathrin, light polypeptide (Lcb) [Mus musculus] 352 5e-97
Alignment gi|NP_058040.1| clathrin, light polypeptide (Lca) [Mus musculus] 218 1e-56
>ref|NP_083146.1| clathrin, light polypeptide (Lcb) [Mus musculus]
Length = 211
Score = 352 bits (903), Expect = 5e-97
Identities = 179/211 (84%), Positives = 182/211 (86%)
Frame = +2
Query: 221 MADDXXXXXXXXXXXXXXXXXXXXXXFLAQQESEIAGIENDEGFGAPAGSQAALAQPGPA 400
MA+D FLAQQESEIAGIEND GFGAPA SQ A AQPG A
Sbjct: 1 MAEDFGFFSSSESGAPEAAEEDPAAAFLAQQESEIAGIENDPGFGAPAASQVASAQPGLA 60
Query: 401 SGAGPEDMGTTVNGDVFQDANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA 580
SGAG EDM TTVNGDVFQ+ANGPADGYAAIAQADRLTQEPESIRKWREEQ+KRLQELDAA
Sbjct: 61 SGAGSEDMSTTVNGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQKKRLQELDAA 120
Query: 581 SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQL 760
SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQL
Sbjct: 121 SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRASEEAFVKESKEETPGTEWEKVAQL 180
Query: 761 CDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 853
CDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR
Sbjct: 181 CDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 211
>ref|NP_058040.1| clathrin, light polypeptide (Lca) [Mus musculus]
Length = 235
Score = 218 bits (554), Expect = 1e-56
Identities = 115/204 (56%), Positives = 139/204 (68%), Gaps = 21/204 (10%)
Frame = +2
Query: 299 FLAQQESEIAGIENDEGFGAPAGSQAALAQPGPAS---GAGPEDMGTTVNGDVFQDANGP 469
FLA +ESEIAGIENDE F G PG A+ G GP+ + +NG+ +Q++NGP
Sbjct: 35 FLAHEESEIAGIENDEAFAILDGGA-----PGRATRRAGGGPDAVDGVMNGEYYQESNGP 89
Query: 470 ADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQ 649
D YAAI++ DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA K+LEEW RQ
Sbjct: 90 TDSYAAISEVDRLQSEPESIRKWREEQTERLEALDANSRKQEAEWKEKAIKELEEWYARQ 149
Query: 650 SEQVEKNKINNRASEEAFVKES------------------KEETPGTEWEKVAQLCDFNP 775
EQ++K K NNRA+EEAF K+ E +PGTEWE+VA LCDFNP
Sbjct: 150 DEQLQKTKANNRAAEEAFYKQPFADVIGYVAAEEAFVNDIDESSPGTEWERVAPLCDFNP 209
Query: 776 KSSKQCKDVSRLRSVLMSLKQTPL 847
KSSKQ KDVSR+RSVL+SLKQ PL
Sbjct: 210 KSSKQAKDVSRMRSVLISLKQAPL 233
Database: RefSeqMP
Posted date: Aug 2, 2006 12:58 AM
Number of letters in database: 21,768,885
Number of sequences in database: 45,328
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,550,714
Number of Sequences: 45328
Number of extensions: 1296540
Number of successful extensions: 11622
Number of sequences better than 1.0e-05: 2
Number of HSP's better than 0.0 without gapping: 6466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10373
length of database: 21,768,885
effective HSP length: 106
effective length of database: 16,964,117
effective search space used: 5140127451
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)