BLASTX 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 20060611C-000851 (1062 letters) Database: RefSeqSP 1040 sequences; 434,620 total letters Searching...done ***** No hits found ****** Database: RefSeqSP Posted date: Aug 1, 2006 7:14 PM Number of letters in database: 434,620 Number of sequences in database: 1040 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 936,907 Number of Sequences: 1040 Number of extensions: 22897 Number of successful extensions: 106 Number of sequences better than 1.0e-05: 0 Number of HSP's better than 0.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 106 length of database: 434,620 effective HSP length: 78 effective length of database: 353,500 effective search space used: 97212500 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
Search to RefSeqBP
BLASTX 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 20060611C-000851 (1062 letters) Database: RefSeqBP 33,508 sequences; 16,112,626 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Alignment gi|NP_776711.1| cAMP responsive element binding protein 3 (luma... 382 e-106 Alignment gi|XP_885877.1| PREDICTED: similar to cAMP responsive element b... 100 3e-21 Alignment gi|XP_608017.2| PREDICTED: similar to cAMP responsive element b... 100 3e-21 Alignment gi|NP_001029604.1| cAMP responsive element binding protein 3-li... 86 4e-17 Alignment gi|XP_590741.2| PREDICTED: similar to cAMP responsive element b... 69 8e-12 >ref|NP_776711.1| cAMP responsive element binding protein 3 (luman) [Bos taurus] Length = 365 Score = 382 bits (982), Expect = e-106 Identities = 207/302 (68%), Positives = 220/302 (72%) Frame = +2 Query: 137 AARDEALEAPLDWELPLSEALSDWDVEDFLSCLSSPPASLTDFSHSDPYLVHHDHTYSLS 316 AA DEAL +P DWELPLSE+LSDWDVEDFLSCL SPPA L FS+SDP LV HDHTYSLS Sbjct: 25 AAPDEALTSPPDWELPLSESLSDWDVEDFLSCLPSPPAVLNVFSNSDPCLVQHDHTYSLS 84 Query: 317 QEYVSIDLDNEDYEKEGAQMTSLRVEAPAEQEIGXXXXXXXXXXXXXXXXXXXXXXXXXX 496 QE+VSIDLDNE YEKE AQMT LRVE PA+QEI Sbjct: 85 QEHVSIDLDNESYEKERAQMTPLRVEEPADQEIARLILTEEEKRLLEKEGLTLPGMLPLT 144 Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676 KMEEQVL+RVRRKIRNKKSAQESRRKKKVYVG LESRVLKY+AQNLELQNKVQLLEEQN Sbjct: 145 KMEEQVLKRVRRKIRNKKSAQESRRKKKVYVGGLESRVLKYTAQNLELQNKVQLLEEQNL 204 Query: 677 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPAEHGVLSR 856 MVIQTANKASSSSTC+ PAMYSSDTRGS PAEH VLSR Sbjct: 205 SLLDQLRRLQAMVIQTANKASSSSTCVLVLLFSFCLLLVPAMYSSDTRGSLPAEHRVLSR 264 Query: 857 QLRALPSEDVPQRDLPALQSEVPQDSSTHELQAPGHSCCLFHHMAWAPGAESPMKLPLPR 1036 QLRALPSED PQ + PALQSEVP+DS ELQA +SCCLFH M AP AE P++LPLP Sbjct: 265 QLRALPSEDPPQLEPPALQSEVPKDSLNPELQAASNSCCLFHLMPQAPRAEPPLQLPLPD 324 Query: 1037 RF 1042 F Sbjct: 325 GF 326 >ref|XP_885877.1| PREDICTED: similar to cAMP responsive element binding protein 3-like 4 isoform 2 [Bos taurus] Length = 257 Score = 100 bits (248), Expect = 3e-21 Identities = 57/128 (44%), Positives = 76/128 (59%), Gaps = 6/128 (4%) Frame = +2 Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676 K EE+VL++VRRKIRNK+SAQ+SRR+KK Y+ LESRV +AQN ELQ KVQ LE N Sbjct: 74 KAEERVLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACAAQNQELQRKVQELERHNI 133 Query: 677 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPA------E 838 +++QT+NKA+ +STC+ P+ S +G P A Sbjct: 134 SLVTQLRQLQMLIVQTSNKAAQTSTCVLILLFSLALIILPSF--SPFQGLPEAGPEDYQP 191 Query: 839 HGVLSRQL 862 HGV+SR + Sbjct: 192 HGVISRNI 199 >ref|XP_608017.2| PREDICTED: similar to cAMP responsive element binding protein 3-like 4 isoform 1 [Bos taurus] Length = 257 Score = 100 bits (248), Expect = 3e-21 Identities = 57/128 (44%), Positives = 76/128 (59%), Gaps = 6/128 (4%) Frame = +2 Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676 K EE+VL++VRRKIRNK+SAQ+SRR+KK Y+ LESRV +AQN ELQ KVQ LE N Sbjct: 74 KAEERVLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACAAQNQELQRKVQELERHNI 133 Query: 677 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPA------E 838 +++QT+NKA+ +STC+ P+ S +G P A Sbjct: 134 SLVTQLRQLQMLIVQTSNKAAQTSTCVLILLFSLALIILPSF--SPFQGLPEAGPEDYQP 191 Query: 839 HGVLSRQL 862 HGV+SR + Sbjct: 192 HGVISRNI 199 >ref|NP_001029604.1| cAMP responsive element binding protein 3-like 3 [Bos taurus] Length = 456 Score = 86.3 bits (212), Expect = 4e-17 Identities = 46/113 (40%), Positives = 70/113 (61%), Gaps = 2/113 (1%) Frame = +2 Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676 K EE++L+++RRKIRNK+SAQESR+KKK Y+ LE+R+ +AQN ELQ KV LE+QN Sbjct: 233 KYEERMLKKIRRKIRNKQSAQESRKKKKEYIDGLETRMSACTAQNQELQRKVLHLEKQNL 292 Query: 677 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAM--YSSDTRGSP 829 +V+Q+ +K++ + TCI P++ ++S+ SP Sbjct: 293 SLLEQLKKLQAIVVQSTSKSAQTGTCIAVLLFSFALIVLPSISPFASNRAESP 345 >ref|XP_590741.2| PREDICTED: similar to cAMP responsive element binding protein 3-like 1 [Bos taurus] Length = 520 Score = 68.6 bits (166), Expect = 8e-12 Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 5/92 (5%) Frame = +2 Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676 K EE+ L+RVRRKI+NK SAQESRRKKK YV LE +V ++++N EL KV+ LE N Sbjct: 285 KAEEKALKRVRRKIKNKISAQESRRKKKEYVECLEKKVETFTSENNELWKKVETLENANR 344 Query: 677 XXXXXXXXXXXMVIQTANK-----ASSSSTCI 757 +V ++ A+ + TC+ Sbjct: 345 TLLQQLQKLQTLVTSKISRPYKMAATQTGTCL 376 Database: RefSeqBP Posted date: Aug 1, 2006 7:14 PM Number of letters in database: 16,112,626 Number of sequences in database: 33,508 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,823,296 Number of Sequences: 33508 Number of extensions: 914534 Number of successful extensions: 5717 Number of sequences better than 1.0e-05: 5 Number of HSP's better than 0.0 without gapping: 4425 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5698 length of database: 16,112,626 effective HSP length: 102 effective length of database: 12,694,810 effective search space used: 3186397310 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
Search to RefSeqHP
BLASTX 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 20060611C-000851 (1062 letters) Database: RefSeqHP 39,411 sequences; 17,774,539 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Alignment gi|NP_006359.3| cAMP responsive element binding protein 3 [Homo... 328 4e-90 Alignment gi|NP_570968.1| cAMP responsive element binding protein 3-like ... 100 3e-21 Alignment gi|NP_115996.1| cAMP responsive element binding protein 3-like ... 88 1e-17 Alignment gi|NP_919047.2| cAMP responsive element binding protein 3-like ... 71 1e-12 Alignment gi|NP_443086.1| cAMP responsive element binding protein 3-like ... 69 9e-12 >ref|NP_006359.3| cAMP responsive element binding protein 3 [Homo sapiens] Length = 371 Score = 328 bits (842), Expect = 4e-90 Identities = 182/309 (58%), Positives = 206/309 (66%), Gaps = 8/309 (2%) Frame = +2 Query: 140 ARDEALEAPLDWELPLSEALSDWDVEDFLSCLSSPPASLTDFSHSDPYLVHHDHTYSLSQ 319 A DEA+ APLDW LPLSE SDW+V+D L L SPPASL S S+P LVHHDHTYSL + Sbjct: 26 APDEAVRAPLDWALPLSEVPSDWEVDDLLCSLLSPPASLNILSSSNPCLVHHDHTYSLPR 85 Query: 320 EYVSIDLDNEDYEKEGAQMTSLRVEAPAEQEIGXXXXXXXXXXXXXXXXXXXXXXXXXXK 499 E VS+DL++E KEG QMT +E AEQEI K Sbjct: 86 ETVSMDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTK 145 Query: 500 MEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNXX 679 EEQ+L+RVRRKIRNK+SAQESRRKKKVYVG LESRVLKY+AQN+ELQNKVQLLEEQN Sbjct: 146 TEEQILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLS 205 Query: 680 XXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPAEHGVLSRQ 859 MVI+ +NK SSSSTCI PAMYSSDTRGS PAEHGVLSRQ Sbjct: 206 LLDQLRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYSSDTRGSLPAEHGVLSRQ 265 Query: 860 LRALPSEDVPQRDLPALQSEVPQDSSTHE--------LQAPGHSCCLFHHMAWAPGAESP 1015 LRALPSED Q +LPALQSEVP+D STH+ LQAPG++ CL H+M AP AE P Sbjct: 266 LRALPSEDPYQLELPALQSEVPKD-STHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAEPP 324 Query: 1016 MKLPLPRRF 1042 ++ P P F Sbjct: 325 LEWPFPDLF 333 >ref|NP_570968.1| cAMP responsive element binding protein 3-like 4 [Homo sapiens] Length = 395 Score = 100 bits (248), Expect = 3e-21 Identities = 59/136 (43%), Positives = 78/136 (57%), Gaps = 4/136 (2%) Frame = +2 Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676 K EE+VL++VRRKIRNK+SAQ+SRR+KK Y+ LESRV SAQN ELQ KVQ LE N Sbjct: 212 KAEERVLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNI 271 Query: 677 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPAE----HG 844 ++ QT+NKA+ +STC+ P+ +R +E HG Sbjct: 272 SLVAQLRQLQTLIAQTSNKAAQTSTCVLILLFSLALIILPSFSPFQSRPEAGSEDYQPHG 331 Query: 845 VLSRQLRALPSEDVPQ 892 V SR + L +DV + Sbjct: 332 VTSRNI--LTHKDVTE 345 >ref|NP_115996.1| cAMP responsive element binding protein 3-like 3 [Homo sapiens] Length = 461 Score = 88.2 bits (217), Expect = 1e-17 Identities = 56/160 (35%), Positives = 88/160 (55%), Gaps = 5/160 (3%) Frame = +2 Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676 K EE+VL+++RRKIRNK+SAQESR+KKK Y+ LE+R+ +AQN ELQ KV LE+QN Sbjct: 238 KYEERVLKKIRRKIRNKQSAQESRKKKKEYIDGLETRMSACTAQNQELQRKVLHLEKQNL 297 Query: 677 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAM--YSSDTRGSPP--AEHG 844 +V+Q+ +K++ + TC+ P++ + + SP A Sbjct: 298 SLLEQLKKLQAIVVQSTSKSAQTGTCVAVLLLSFALIILPSISPFGPNKTESPGDFAPVR 357 Query: 845 VLSRQLRALPSEDVPQRDLPALQSEVPQ-DSSTHELQAPG 961 V SR L + V +P ++ P+ ++ T ++PG Sbjct: 358 VFSRTLHNDAASRVAADAVPGSEAPGPRPEADTTREESPG 397 >ref|NP_919047.2| cAMP responsive element binding protein 3-like 2 [Homo sapiens] Length = 520 Score = 71.2 bits (173), Expect = 1e-12 Identities = 35/59 (59%), Positives = 46/59 (77%) Frame = +2 Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQN 673 K EE+ L+++RRKI+NK SAQESRRKKK Y+ SLE +V S +NLEL+ KV++LE N Sbjct: 289 KSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTN 347 >ref|NP_443086.1| cAMP responsive element binding protein 3-like 1 [Homo sapiens] Length = 519 Score = 68.6 bits (166), Expect = 9e-12 Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 5/92 (5%) Frame = +2 Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676 K EE+ L+RVRRKI+NK SAQESRRKKK YV LE +V ++++N EL KV+ LE N Sbjct: 285 KAEEKALKRVRRKIKNKISAQESRRKKKEYVECLEKKVETFTSENNELWKKVETLENANR 344 Query: 677 XXXXXXXXXXXMVIQTANK-----ASSSSTCI 757 +V ++ A+ + TC+ Sbjct: 345 TLLQQLQKLQTLVTNKISRPYKMAATQTGTCL 376 Database: RefSeqHP Posted date: Aug 2, 2006 12:57 AM Number of letters in database: 17,774,539 Number of sequences in database: 39,411 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,017,766 Number of Sequences: 39411 Number of extensions: 1089667 Number of successful extensions: 7444 Number of sequences better than 1.0e-05: 5 Number of HSP's better than 0.0 without gapping: 5510 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7404 length of database: 17,774,539 effective HSP length: 103 effective length of database: 13,715,206 effective search space used: 3428801500 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
Search to RefSeqCP
BLASTX 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 20060611C-000851 (1062 letters) Database: RefSeqCP 33,732 sequences; 19,266,565 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Alignment gi|XP_854750.1| PREDICTED: similar to cAMP responsive element b... 343 1e-94 Alignment gi|XP_855139.1| PREDICTED: similar to cAMP responsive element b... 97 3e-20 Alignment gi|XP_542164.2| PREDICTED: similar to cAMP responsive element b... 87 3e-17 Alignment gi|XP_548490.2| PREDICTED: similar to cAMP responsive element b... 72 1e-12 Alignment gi|XP_540756.2| PREDICTED: similar to cAMP responsive element b... 69 1e-11 >ref|XP_854750.1| PREDICTED: similar to cAMP responsive element binding protein 3 [Canis familiaris] Length = 411 Score = 343 bits (881), Expect = 1e-94 Identities = 184/284 (64%), Positives = 202/284 (71%) Frame = +2 Query: 182 PLSEALSDWDVEDFLSCLSSPPASLTDFSHSDPYLVHHDHTYSLSQEYVSIDLDNEDYEK 361 PLSEALS+W+ EDFLS + SPPASL S SD LVHHDHTYSLSQ++VSIDLD Y K Sbjct: 86 PLSEALSEWEAEDFLSSMLSPPASLNVLSSSDSCLVHHDHTYSLSQQHVSIDLDGGSYGK 145 Query: 362 EGAQMTSLRVEAPAEQEIGXXXXXXXXXXXXXXXXXXXXXXXXXXKMEEQVLRRVRRKIR 541 E AQ T L+VE PAEQEI KMEEQVL RVRRKIR Sbjct: 146 EEAQTTPLQVEEPAEQEIARLILTDEEKRLLEKEGLTLHGTLPLTKMEEQVLTRVRRKIR 205 Query: 542 NKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNXXXXXXXXXXXXMVIQ 721 NKKSAQESRRKKKVY+G LE+RVLKY+AQNLELQNKVQLLEEQN M+IQ Sbjct: 206 NKKSAQESRRKKKVYLGGLENRVLKYTAQNLELQNKVQLLEEQNLSLLDQLRRLQAMLIQ 265 Query: 722 TANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPAEHGVLSRQLRALPSEDVPQRDL 901 +NK SSSSTC+ PAMYSSDTRGS PAEHGVLSRQLRALPSED Q +L Sbjct: 266 ISNKTSSSSTCVLVLLFSFCLLIVPAMYSSDTRGSLPAEHGVLSRQLRALPSEDPHQLEL 325 Query: 902 PALQSEVPQDSSTHELQAPGHSCCLFHHMAWAPGAESPMKLPLP 1033 PALQSEVP+DSS ELQAPG+SCC +H+ APGAESP+KLPLP Sbjct: 326 PALQSEVPKDSSDQELQAPGNSCCPLYHLPQAPGAESPLKLPLP 369 >ref|XP_855139.1| PREDICTED: similar to cAMP responsive element binding protein 3-like 4 [Canis familiaris] Length = 384 Score = 97.1 bits (240), Expect = 3e-20 Identities = 56/128 (43%), Positives = 75/128 (58%), Gaps = 6/128 (4%) Frame = +2 Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676 K EE+VL+++RRKIRNK+SAQ+SRR+KK Y+ LESRV SAQN ELQ KVQ LE N Sbjct: 201 KAEERVLKKIRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNI 260 Query: 677 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPA------E 838 ++ QT+NKA+ +STC+ P++ S +G A Sbjct: 261 SLVTQLRQLQTLIAQTSNKAAQTSTCVLILLFSLALIVLPSV--SPLQGLREAGSEDYQP 318 Query: 839 HGVLSRQL 862 HGV+SR + Sbjct: 319 HGVISRNI 326 >ref|XP_542164.2| PREDICTED: similar to cAMP responsive element binding protein 3-like 3 [Canis familiaris] Length = 609 Score = 87.0 bits (214), Expect = 3e-17 Identities = 55/160 (34%), Positives = 84/160 (52%), Gaps = 5/160 (3%) Frame = +2 Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676 K EE+VL+++RRKIRNK+SAQESR+KKK Y+ LE+R+ +AQN ELQ KV LE+QN Sbjct: 358 KYEERVLKKIRRKIRNKQSAQESRKKKKEYIDGLETRMSACTAQNQELQRKVLHLEKQNL 417 Query: 677 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPA----MYSSDTRGSPPAEHG 844 +V+Q+ +K++ + TC+ P+ + + A Sbjct: 418 SLLEQLKKLQAIVVQSTSKSAQTGTCLAVLLFSFALIVLPSISPFVANKAKHAGDYAPVR 477 Query: 845 VLSRQLRALPSEDVPQRDLPALQSEVPQ-DSSTHELQAPG 961 V SR L P+ V +P ++ P+ T + +PG Sbjct: 478 VFSRTLHNDPASRVAPDAIPGSEAPGPRPKGGTPQEGSPG 517 >ref|XP_548490.2| PREDICTED: similar to cAMP responsive element binding protein 3-like 2 [Canis familiaris] Length = 393 Score = 71.6 bits (174), Expect = 1e-12 Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 10/127 (7%) Frame = +2 Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676 K EE+ L+++RRKI+NK SAQESRRKKK Y+ SLE +V S +NLEL+ KV++LE N Sbjct: 186 KSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTNR 245 Query: 677 XXXXXXXXXXXMVIQTANK-----ASSSSTCIX-----XXXXXXXXXXXPAMYSSDTRGS 826 +V+ ++ + + TC+ Y S T+ + Sbjct: 246 TLLQQLQKLQTLVMGKVSRTCKLAGTQTGTCLMVVVLCFAVAFGSFFQGYGPYPSATKMA 305 Query: 827 PPAEHGV 847 P++H V Sbjct: 306 LPSQHSV 312 >ref|XP_540756.2| PREDICTED: similar to cAMP responsive element binding protein 3-like 1 [Canis familiaris] Length = 725 Score = 68.6 bits (166), Expect = 1e-11 Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 5/92 (5%) Frame = +2 Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676 K EE+ L+RVRRKI+NK SAQESRRKKK YV LE +V ++++N EL KV+ LE N Sbjct: 490 KAEEKALKRVRRKIKNKISAQESRRKKKEYVECLEKKVETFTSENNELWKKVETLENANR 549 Query: 677 XXXXXXXXXXXMVIQTANK-----ASSSSTCI 757 +V ++ A+ + TC+ Sbjct: 550 TLLQQLQKLQTLVTNKISRPYKMAATQTGTCL 581 Database: RefSeqCP Posted date: Aug 1, 2006 9:25 PM Number of letters in database: 19,266,565 Number of sequences in database: 33,732 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,013,153 Number of Sequences: 33732 Number of extensions: 1077684 Number of successful extensions: 6799 Number of sequences better than 1.0e-05: 5 Number of HSP's better than 0.0 without gapping: 5243 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6756 length of database: 19,266,565 effective HSP length: 104 effective length of database: 15,758,437 effective search space used: 3923850813 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
Search to RefSeqMP
BLASTX 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 20060611C-000851 (1062 letters) Database: RefSeqMP 45,328 sequences; 21,768,885 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Alignment gi|NP_038525.1| cAMP responsive element binding protein 3 [Mus ... 248 6e-66 Alignment gi|NP_084356.1| androgen-induced basic leucine zipper [Mus musc... 95 1e-19 Alignment gi|NP_663340.1| cAMP responsive element binding protein 3-like ... 86 5e-17 Alignment gi|NP_848776.1| cAMP responsive element binding protein 3-like ... 72 1e-12 Alignment gi|XP_919654.2| PREDICTED: similar to cAMP responsive element b... 71 2e-12 Alignment gi|NP_036087.1| cAMP responsive element binding protein 3-like ... 70 5e-12 >ref|NP_038525.1| cAMP responsive element binding protein 3 [Mus musculus] Length = 379 Score = 248 bits (634), Expect = 6e-66 Identities = 157/311 (50%), Positives = 181/311 (58%), Gaps = 13/311 (4%) Frame = +2 Query: 137 AARDEALEAPLDWELPLSE----ALSDWDVEDFLSCLSSPPASLTDFSHSDPYLVHHDHT 304 AA + ++APLD EL SE LSDW+VED LS L SP AS D S + HDH Sbjct: 31 AATEPDVKAPLDLELSPSENSVQELSDWEVEDLLSSLLSPSAS-RDVLGSSSSSILHDHN 89 Query: 305 YSLSQEYVSIDLDNEDYEKEGAQMTSLR-VEAPAEQEIGXXXXXXXXXXXXXXXXXXXXX 481 YSL QE+VSIDLD E +EKEG +T L E AEQE+ Sbjct: 90 YSLPQEHVSIDLDTESFEKEGFHVTPLPGEERAAEQEMSRLILTEEEKKLLEKEGLTLPS 149 Query: 482 XXXXXKMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLL 661 K+EEQVL+RVRRKIRNK++AQESR+KKKVYV LESRVLKY+AQN ELQNKVQ L Sbjct: 150 TLPLTKVEEQVLKRVRRKIRNKRAAQESRKKKKVYVVGLESRVLKYTAQNRELQNKVQRL 209 Query: 662 EEQNXXXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPAEH 841 EEQN MVI+ ANK SS STC+ PAMYSSD RGS PAE+ Sbjct: 210 EEQNLSLLDQLRKLQAMVIEIANKTSSGSTCVLVLVFSFCLLLVPAMYSSDARGSVPAEY 269 Query: 842 GVLSRQLRALPSEDVPQRDLPALQSEVPQDSSTHELQAPGH--------SCCLFHHMAWA 997 VL R+LRALPSED Q AL SE+P DS+ L + H SC L+H A Sbjct: 270 VVLHRKLRALPSEDDHQPKPSALSSELPMDSTHQSLDSSEHMFLVSSNFSCVLYH----A 325 Query: 998 PGAESPMKLPL 1030 P AE P+ PL Sbjct: 326 PQAEQPLHWPL 336 >ref|NP_084356.1| androgen-induced basic leucine zipper [Mus musculus] Length = 370 Score = 94.7 bits (234), Expect = 1e-19 Identities = 60/157 (38%), Positives = 89/157 (56%), Gaps = 8/157 (5%) Frame = +2 Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676 K EE++L+++RRKIRNK+SAQ+SRR+KK Y+ LESRV S QN +LQ KVQ LE QN Sbjct: 188 KAEERILKKIRRKIRNKQSAQDSRRRKKEYLDGLESRVAACSEQNQKLQRKVQELERQNI 247 Query: 677 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMY----SSDTRGSPPAEHG 844 + QT+++A+ +STC+ P+ S+ R HG Sbjct: 248 FLMEQVRQLQKLTAQTSSRAAQTSTCVLILLFSLALIILPSFSPFQGQSEARPEDYQLHG 307 Query: 845 VLSRQLRALPSEDVPQR-DLPALQS---EVPQDSSTH 943 V+SR + L E+V + + P L+S E+P+ +T+ Sbjct: 308 VISRNI--LTHENVTENLESPVLKSKLEELPEAPTTN 342 >ref|NP_663340.1| cAMP responsive element binding protein 3-like 3 [Mus musculus] Length = 479 Score = 86.3 bits (212), Expect = 5e-17 Identities = 47/113 (41%), Positives = 69/113 (61%), Gaps = 2/113 (1%) Frame = +2 Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676 K EE+VL+++RRKIRNK+SAQESR+KKK Y+ LE+R+ +AQN ELQ KV LE+QN Sbjct: 234 KYEERVLKKIRRKIRNKQSAQESRKKKKEYIDGLENRMSACTAQNQELQRKVLHLEKQNL 293 Query: 677 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAM--YSSDTRGSP 829 +V+Q+ +K + + TCI P++ ++S+ SP Sbjct: 294 SLLEQLKHLQALVVQSTSKPAHAGTCIAVLLLSFALIILPSISPFNSNKVDSP 346 >ref|NP_848776.1| cAMP responsive element binding protein 3-like 2 [Mus musculus] Length = 521 Score = 72.0 bits (175), Expect = 1e-12 Identities = 35/59 (59%), Positives = 47/59 (79%) Frame = +2 Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQN 673 K EE+ L+++RRKI+NK SAQESRRKKK Y+ SLE +V S +NLEL+ KV++LE+ N Sbjct: 289 KSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLEDTN 347 >ref|XP_919654.2| PREDICTED: similar to cAMP responsive element binding protein 3-like 2 [Mus musculus] Length = 477 Score = 71.2 bits (173), Expect = 2e-12 Identities = 35/59 (59%), Positives = 46/59 (77%) Frame = +2 Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQN 673 K EE+ L+++RRKI+NK SAQESRRKKK Y+ SLE +V S +NLEL+ KV++LE N Sbjct: 245 KSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTN 303 >ref|NP_036087.1| cAMP responsive element binding protein 3-like 1 [Mus musculus] Length = 507 Score = 69.7 bits (169), Expect = 5e-12 Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 5/92 (5%) Frame = +2 Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676 K EE+ L+RVRRKI+NK SAQESRRKKK YV LE +V Y+++N EL KV+ LE N Sbjct: 285 KAEEKALKRVRRKIKNKISAQESRRKKKEYVECLEKKVETYTSENNELWKKVETLETANR 344 Query: 677 XXXXXXXXXXXMVIQTANK-----ASSSSTCI 757 +V ++ A+ + TC+ Sbjct: 345 TLLQQLQKLQTLVTSKISRPYKMAATQTGTCL 376 Database: RefSeqMP Posted date: Aug 2, 2006 12:58 AM Number of letters in database: 21,768,885 Number of sequences in database: 45,328 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,912,229 Number of Sequences: 45328 Number of extensions: 1217880 Number of successful extensions: 7805 Number of sequences better than 1.0e-05: 6 Number of HSP's better than 0.0 without gapping: 5857 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7737 length of database: 21,768,885 effective HSP length: 104 effective length of database: 17,054,773 effective search space used: 4246638477 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)