Animal-Genome cDNA 20060611C-000851


Search to RefSeqSP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611C-000851
         (1062 letters)

Database: RefSeqSP 
           1040 sequences; 434,620 total letters

Searching...done

 ***** No hits found ******

  Database: RefSeqSP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 434,620
  Number of sequences in database:  1040
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 936,907
Number of Sequences: 1040
Number of extensions: 22897
Number of successful extensions: 106
Number of sequences better than 1.0e-05: 0
Number of HSP's better than  0.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 434,620
effective HSP length: 78
effective length of database: 353,500
effective search space used: 97212500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqBP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611C-000851
         (1062 letters)

Database: RefSeqBP 
           33,508 sequences; 16,112,626 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_776711.1| cAMP responsive element binding protein 3 (luma...   382   e-106
Alignment   gi|XP_885877.1| PREDICTED: similar to cAMP responsive element b...   100   3e-21
Alignment   gi|XP_608017.2| PREDICTED: similar to cAMP responsive element b...   100   3e-21
Alignment   gi|NP_001029604.1| cAMP responsive element binding protein 3-li...    86   4e-17
Alignment   gi|XP_590741.2| PREDICTED: similar to cAMP responsive element b...    69   8e-12

>ref|NP_776711.1| cAMP responsive element binding protein 3 (luman) [Bos taurus]
          Length = 365

 Score =  382 bits (982), Expect = e-106
 Identities = 207/302 (68%), Positives = 220/302 (72%)
 Frame = +2

Query: 137  AARDEALEAPLDWELPLSEALSDWDVEDFLSCLSSPPASLTDFSHSDPYLVHHDHTYSLS 316
            AA DEAL +P DWELPLSE+LSDWDVEDFLSCL SPPA L  FS+SDP LV HDHTYSLS
Sbjct: 25   AAPDEALTSPPDWELPLSESLSDWDVEDFLSCLPSPPAVLNVFSNSDPCLVQHDHTYSLS 84

Query: 317  QEYVSIDLDNEDYEKEGAQMTSLRVEAPAEQEIGXXXXXXXXXXXXXXXXXXXXXXXXXX 496
            QE+VSIDLDNE YEKE AQMT LRVE PA+QEI                           
Sbjct: 85   QEHVSIDLDNESYEKERAQMTPLRVEEPADQEIARLILTEEEKRLLEKEGLTLPGMLPLT 144

Query: 497  KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676
            KMEEQVL+RVRRKIRNKKSAQESRRKKKVYVG LESRVLKY+AQNLELQNKVQLLEEQN 
Sbjct: 145  KMEEQVLKRVRRKIRNKKSAQESRRKKKVYVGGLESRVLKYTAQNLELQNKVQLLEEQNL 204

Query: 677  XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPAEHGVLSR 856
                       MVIQTANKASSSSTC+            PAMYSSDTRGS PAEH VLSR
Sbjct: 205  SLLDQLRRLQAMVIQTANKASSSSTCVLVLLFSFCLLLVPAMYSSDTRGSLPAEHRVLSR 264

Query: 857  QLRALPSEDVPQRDLPALQSEVPQDSSTHELQAPGHSCCLFHHMAWAPGAESPMKLPLPR 1036
            QLRALPSED PQ + PALQSEVP+DS   ELQA  +SCCLFH M  AP AE P++LPLP 
Sbjct: 265  QLRALPSEDPPQLEPPALQSEVPKDSLNPELQAASNSCCLFHLMPQAPRAEPPLQLPLPD 324

Query: 1037 RF 1042
             F
Sbjct: 325  GF 326


>ref|XP_885877.1| PREDICTED: similar to cAMP responsive element binding protein
           3-like 4 isoform 2 [Bos taurus]
          Length = 257

 Score =  100 bits (248), Expect = 3e-21
 Identities = 57/128 (44%), Positives = 76/128 (59%), Gaps = 6/128 (4%)
 Frame = +2

Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676
           K EE+VL++VRRKIRNK+SAQ+SRR+KK Y+  LESRV   +AQN ELQ KVQ LE  N 
Sbjct: 74  KAEERVLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACAAQNQELQRKVQELERHNI 133

Query: 677 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPA------E 838
                      +++QT+NKA+ +STC+            P+   S  +G P A       
Sbjct: 134 SLVTQLRQLQMLIVQTSNKAAQTSTCVLILLFSLALIILPSF--SPFQGLPEAGPEDYQP 191

Query: 839 HGVLSRQL 862
           HGV+SR +
Sbjct: 192 HGVISRNI 199


>ref|XP_608017.2| PREDICTED: similar to cAMP responsive element binding protein
           3-like 4 isoform 1 [Bos taurus]
          Length = 257

 Score =  100 bits (248), Expect = 3e-21
 Identities = 57/128 (44%), Positives = 76/128 (59%), Gaps = 6/128 (4%)
 Frame = +2

Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676
           K EE+VL++VRRKIRNK+SAQ+SRR+KK Y+  LESRV   +AQN ELQ KVQ LE  N 
Sbjct: 74  KAEERVLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACAAQNQELQRKVQELERHNI 133

Query: 677 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPA------E 838
                      +++QT+NKA+ +STC+            P+   S  +G P A       
Sbjct: 134 SLVTQLRQLQMLIVQTSNKAAQTSTCVLILLFSLALIILPSF--SPFQGLPEAGPEDYQP 191

Query: 839 HGVLSRQL 862
           HGV+SR +
Sbjct: 192 HGVISRNI 199


>ref|NP_001029604.1| cAMP responsive element binding protein 3-like 3 [Bos taurus]
          Length = 456

 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 46/113 (40%), Positives = 70/113 (61%), Gaps = 2/113 (1%)
 Frame = +2

Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676
           K EE++L+++RRKIRNK+SAQESR+KKK Y+  LE+R+   +AQN ELQ KV  LE+QN 
Sbjct: 233 KYEERMLKKIRRKIRNKQSAQESRKKKKEYIDGLETRMSACTAQNQELQRKVLHLEKQNL 292

Query: 677 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAM--YSSDTRGSP 829
                      +V+Q+ +K++ + TCI            P++  ++S+   SP
Sbjct: 293 SLLEQLKKLQAIVVQSTSKSAQTGTCIAVLLFSFALIVLPSISPFASNRAESP 345


>ref|XP_590741.2| PREDICTED: similar to cAMP responsive element binding protein
           3-like 1 [Bos taurus]
          Length = 520

 Score = 68.6 bits (166), Expect = 8e-12
 Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
 Frame = +2

Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676
           K EE+ L+RVRRKI+NK SAQESRRKKK YV  LE +V  ++++N EL  KV+ LE  N 
Sbjct: 285 KAEEKALKRVRRKIKNKISAQESRRKKKEYVECLEKKVETFTSENNELWKKVETLENANR 344

Query: 677 XXXXXXXXXXXMVIQTANK-----ASSSSTCI 757
                      +V    ++     A+ + TC+
Sbjct: 345 TLLQQLQKLQTLVTSKISRPYKMAATQTGTCL 376


  Database: RefSeqBP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 16,112,626
  Number of sequences in database:  33,508
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,823,296
Number of Sequences: 33508
Number of extensions: 914534
Number of successful extensions: 5717
Number of sequences better than 1.0e-05: 5
Number of HSP's better than  0.0 without gapping: 4425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5698
length of database: 16,112,626
effective HSP length: 102
effective length of database: 12,694,810
effective search space used: 3186397310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqHP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611C-000851
         (1062 letters)

Database: RefSeqHP 
           39,411 sequences; 17,774,539 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_006359.3| cAMP responsive element binding protein 3 [Homo...   328   4e-90
Alignment   gi|NP_570968.1| cAMP responsive element binding protein 3-like ...   100   3e-21
Alignment   gi|NP_115996.1| cAMP responsive element binding protein 3-like ...    88   1e-17
Alignment   gi|NP_919047.2| cAMP responsive element binding protein 3-like ...    71   1e-12
Alignment   gi|NP_443086.1| cAMP responsive element binding protein 3-like ...    69   9e-12

>ref|NP_006359.3| cAMP responsive element binding protein 3 [Homo sapiens]
          Length = 371

 Score =  328 bits (842), Expect = 4e-90
 Identities = 182/309 (58%), Positives = 206/309 (66%), Gaps = 8/309 (2%)
 Frame = +2

Query: 140  ARDEALEAPLDWELPLSEALSDWDVEDFLSCLSSPPASLTDFSHSDPYLVHHDHTYSLSQ 319
            A DEA+ APLDW LPLSE  SDW+V+D L  L SPPASL   S S+P LVHHDHTYSL +
Sbjct: 26   APDEAVRAPLDWALPLSEVPSDWEVDDLLCSLLSPPASLNILSSSNPCLVHHDHTYSLPR 85

Query: 320  EYVSIDLDNEDYEKEGAQMTSLRVEAPAEQEIGXXXXXXXXXXXXXXXXXXXXXXXXXXK 499
            E VS+DL++E   KEG QMT   +E  AEQEI                           K
Sbjct: 86   ETVSMDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTK 145

Query: 500  MEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNXX 679
             EEQ+L+RVRRKIRNK+SAQESRRKKKVYVG LESRVLKY+AQN+ELQNKVQLLEEQN  
Sbjct: 146  TEEQILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLS 205

Query: 680  XXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPAEHGVLSRQ 859
                      MVI+ +NK SSSSTCI            PAMYSSDTRGS PAEHGVLSRQ
Sbjct: 206  LLDQLRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYSSDTRGSLPAEHGVLSRQ 265

Query: 860  LRALPSEDVPQRDLPALQSEVPQDSSTHE--------LQAPGHSCCLFHHMAWAPGAESP 1015
            LRALPSED  Q +LPALQSEVP+D STH+        LQAPG++ CL H+M  AP AE P
Sbjct: 266  LRALPSEDPYQLELPALQSEVPKD-STHQWLDGSDCVLQAPGNTSCLLHYMPQAPSAEPP 324

Query: 1016 MKLPLPRRF 1042
            ++ P P  F
Sbjct: 325  LEWPFPDLF 333


>ref|NP_570968.1| cAMP responsive element binding protein 3-like 4 [Homo sapiens]
          Length = 395

 Score =  100 bits (248), Expect = 3e-21
 Identities = 59/136 (43%), Positives = 78/136 (57%), Gaps = 4/136 (2%)
 Frame = +2

Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676
           K EE+VL++VRRKIRNK+SAQ+SRR+KK Y+  LESRV   SAQN ELQ KVQ LE  N 
Sbjct: 212 KAEERVLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNI 271

Query: 677 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPAE----HG 844
                      ++ QT+NKA+ +STC+            P+     +R    +E    HG
Sbjct: 272 SLVAQLRQLQTLIAQTSNKAAQTSTCVLILLFSLALIILPSFSPFQSRPEAGSEDYQPHG 331

Query: 845 VLSRQLRALPSEDVPQ 892
           V SR +  L  +DV +
Sbjct: 332 VTSRNI--LTHKDVTE 345


>ref|NP_115996.1| cAMP responsive element binding protein 3-like 3 [Homo sapiens]
          Length = 461

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 56/160 (35%), Positives = 88/160 (55%), Gaps = 5/160 (3%)
 Frame = +2

Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676
           K EE+VL+++RRKIRNK+SAQESR+KKK Y+  LE+R+   +AQN ELQ KV  LE+QN 
Sbjct: 238 KYEERVLKKIRRKIRNKQSAQESRKKKKEYIDGLETRMSACTAQNQELQRKVLHLEKQNL 297

Query: 677 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAM--YSSDTRGSPP--AEHG 844
                      +V+Q+ +K++ + TC+            P++  +  +   SP   A   
Sbjct: 298 SLLEQLKKLQAIVVQSTSKSAQTGTCVAVLLLSFALIILPSISPFGPNKTESPGDFAPVR 357

Query: 845 VLSRQLRALPSEDVPQRDLPALQSEVPQ-DSSTHELQAPG 961
           V SR L    +  V    +P  ++  P+ ++ T   ++PG
Sbjct: 358 VFSRTLHNDAASRVAADAVPGSEAPGPRPEADTTREESPG 397


>ref|NP_919047.2| cAMP responsive element binding protein 3-like 2 [Homo sapiens]
          Length = 520

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 35/59 (59%), Positives = 46/59 (77%)
 Frame = +2

Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQN 673
           K EE+ L+++RRKI+NK SAQESRRKKK Y+ SLE +V   S +NLEL+ KV++LE  N
Sbjct: 289 KSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTN 347


>ref|NP_443086.1| cAMP responsive element binding protein 3-like 1 [Homo sapiens]
          Length = 519

 Score = 68.6 bits (166), Expect = 9e-12
 Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
 Frame = +2

Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676
           K EE+ L+RVRRKI+NK SAQESRRKKK YV  LE +V  ++++N EL  KV+ LE  N 
Sbjct: 285 KAEEKALKRVRRKIKNKISAQESRRKKKEYVECLEKKVETFTSENNELWKKVETLENANR 344

Query: 677 XXXXXXXXXXXMVIQTANK-----ASSSSTCI 757
                      +V    ++     A+ + TC+
Sbjct: 345 TLLQQLQKLQTLVTNKISRPYKMAATQTGTCL 376


  Database: RefSeqHP
    Posted date:  Aug 2, 2006 12:57 AM
  Number of letters in database: 17,774,539
  Number of sequences in database:  39,411
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,017,766
Number of Sequences: 39411
Number of extensions: 1089667
Number of successful extensions: 7444
Number of sequences better than 1.0e-05: 5
Number of HSP's better than  0.0 without gapping: 5510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7404
length of database: 17,774,539
effective HSP length: 103
effective length of database: 13,715,206
effective search space used: 3428801500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqCP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611C-000851
         (1062 letters)

Database: RefSeqCP 
           33,732 sequences; 19,266,565 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_854750.1| PREDICTED: similar to cAMP responsive element b...   343   1e-94
Alignment   gi|XP_855139.1| PREDICTED: similar to cAMP responsive element b...    97   3e-20
Alignment   gi|XP_542164.2| PREDICTED: similar to cAMP responsive element b...    87   3e-17
Alignment   gi|XP_548490.2| PREDICTED: similar to cAMP responsive element b...    72   1e-12
Alignment   gi|XP_540756.2| PREDICTED: similar to cAMP responsive element b...    69   1e-11

>ref|XP_854750.1| PREDICTED: similar to cAMP responsive element binding protein 3
            [Canis familiaris]
          Length = 411

 Score =  343 bits (881), Expect = 1e-94
 Identities = 184/284 (64%), Positives = 202/284 (71%)
 Frame = +2

Query: 182  PLSEALSDWDVEDFLSCLSSPPASLTDFSHSDPYLVHHDHTYSLSQEYVSIDLDNEDYEK 361
            PLSEALS+W+ EDFLS + SPPASL   S SD  LVHHDHTYSLSQ++VSIDLD   Y K
Sbjct: 86   PLSEALSEWEAEDFLSSMLSPPASLNVLSSSDSCLVHHDHTYSLSQQHVSIDLDGGSYGK 145

Query: 362  EGAQMTSLRVEAPAEQEIGXXXXXXXXXXXXXXXXXXXXXXXXXXKMEEQVLRRVRRKIR 541
            E AQ T L+VE PAEQEI                           KMEEQVL RVRRKIR
Sbjct: 146  EEAQTTPLQVEEPAEQEIARLILTDEEKRLLEKEGLTLHGTLPLTKMEEQVLTRVRRKIR 205

Query: 542  NKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNXXXXXXXXXXXXMVIQ 721
            NKKSAQESRRKKKVY+G LE+RVLKY+AQNLELQNKVQLLEEQN            M+IQ
Sbjct: 206  NKKSAQESRRKKKVYLGGLENRVLKYTAQNLELQNKVQLLEEQNLSLLDQLRRLQAMLIQ 265

Query: 722  TANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPAEHGVLSRQLRALPSEDVPQRDL 901
             +NK SSSSTC+            PAMYSSDTRGS PAEHGVLSRQLRALPSED  Q +L
Sbjct: 266  ISNKTSSSSTCVLVLLFSFCLLIVPAMYSSDTRGSLPAEHGVLSRQLRALPSEDPHQLEL 325

Query: 902  PALQSEVPQDSSTHELQAPGHSCCLFHHMAWAPGAESPMKLPLP 1033
            PALQSEVP+DSS  ELQAPG+SCC  +H+  APGAESP+KLPLP
Sbjct: 326  PALQSEVPKDSSDQELQAPGNSCCPLYHLPQAPGAESPLKLPLP 369


>ref|XP_855139.1| PREDICTED: similar to cAMP responsive element binding protein
           3-like 4 [Canis familiaris]
          Length = 384

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 56/128 (43%), Positives = 75/128 (58%), Gaps = 6/128 (4%)
 Frame = +2

Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676
           K EE+VL+++RRKIRNK+SAQ+SRR+KK Y+  LESRV   SAQN ELQ KVQ LE  N 
Sbjct: 201 KAEERVLKKIRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNI 260

Query: 677 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPA------E 838
                      ++ QT+NKA+ +STC+            P++  S  +G   A       
Sbjct: 261 SLVTQLRQLQTLIAQTSNKAAQTSTCVLILLFSLALIVLPSV--SPLQGLREAGSEDYQP 318

Query: 839 HGVLSRQL 862
           HGV+SR +
Sbjct: 319 HGVISRNI 326


>ref|XP_542164.2| PREDICTED: similar to cAMP responsive element binding protein
           3-like 3 [Canis familiaris]
          Length = 609

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 55/160 (34%), Positives = 84/160 (52%), Gaps = 5/160 (3%)
 Frame = +2

Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676
           K EE+VL+++RRKIRNK+SAQESR+KKK Y+  LE+R+   +AQN ELQ KV  LE+QN 
Sbjct: 358 KYEERVLKKIRRKIRNKQSAQESRKKKKEYIDGLETRMSACTAQNQELQRKVLHLEKQNL 417

Query: 677 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPA----MYSSDTRGSPPAEHG 844
                      +V+Q+ +K++ + TC+            P+    + +        A   
Sbjct: 418 SLLEQLKKLQAIVVQSTSKSAQTGTCLAVLLFSFALIVLPSISPFVANKAKHAGDYAPVR 477

Query: 845 VLSRQLRALPSEDVPQRDLPALQSEVPQ-DSSTHELQAPG 961
           V SR L   P+  V    +P  ++  P+    T +  +PG
Sbjct: 478 VFSRTLHNDPASRVAPDAIPGSEAPGPRPKGGTPQEGSPG 517


>ref|XP_548490.2| PREDICTED: similar to cAMP responsive element binding protein
           3-like 2 [Canis familiaris]
          Length = 393

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 10/127 (7%)
 Frame = +2

Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676
           K EE+ L+++RRKI+NK SAQESRRKKK Y+ SLE +V   S +NLEL+ KV++LE  N 
Sbjct: 186 KSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTNR 245

Query: 677 XXXXXXXXXXXMVIQTANK-----ASSSSTCIX-----XXXXXXXXXXXPAMYSSDTRGS 826
                      +V+   ++      + + TC+                    Y S T+ +
Sbjct: 246 TLLQQLQKLQTLVMGKVSRTCKLAGTQTGTCLMVVVLCFAVAFGSFFQGYGPYPSATKMA 305

Query: 827 PPAEHGV 847
            P++H V
Sbjct: 306 LPSQHSV 312


>ref|XP_540756.2| PREDICTED: similar to cAMP responsive element binding protein
           3-like 1 [Canis familiaris]
          Length = 725

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
 Frame = +2

Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676
           K EE+ L+RVRRKI+NK SAQESRRKKK YV  LE +V  ++++N EL  KV+ LE  N 
Sbjct: 490 KAEEKALKRVRRKIKNKISAQESRRKKKEYVECLEKKVETFTSENNELWKKVETLENANR 549

Query: 677 XXXXXXXXXXXMVIQTANK-----ASSSSTCI 757
                      +V    ++     A+ + TC+
Sbjct: 550 TLLQQLQKLQTLVTNKISRPYKMAATQTGTCL 581


  Database: RefSeqCP
    Posted date:  Aug 1, 2006  9:25 PM
  Number of letters in database: 19,266,565
  Number of sequences in database:  33,732
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,013,153
Number of Sequences: 33732
Number of extensions: 1077684
Number of successful extensions: 6799
Number of sequences better than 1.0e-05: 5
Number of HSP's better than  0.0 without gapping: 5243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6756
length of database: 19,266,565
effective HSP length: 104
effective length of database: 15,758,437
effective search space used: 3923850813
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqMP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611C-000851
         (1062 letters)

Database: RefSeqMP 
           45,328 sequences; 21,768,885 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_038525.1| cAMP responsive element binding protein 3 [Mus ...   248   6e-66
Alignment   gi|NP_084356.1| androgen-induced basic leucine zipper [Mus musc...    95   1e-19
Alignment   gi|NP_663340.1| cAMP responsive element binding protein 3-like ...    86   5e-17
Alignment   gi|NP_848776.1| cAMP responsive element binding protein 3-like ...    72   1e-12
Alignment   gi|XP_919654.2| PREDICTED: similar to cAMP responsive element b...    71   2e-12
Alignment   gi|NP_036087.1| cAMP responsive element binding protein 3-like ...    70   5e-12

>ref|NP_038525.1| cAMP responsive element binding protein 3 [Mus musculus]
          Length = 379

 Score =  248 bits (634), Expect = 6e-66
 Identities = 157/311 (50%), Positives = 181/311 (58%), Gaps = 13/311 (4%)
 Frame = +2

Query: 137  AARDEALEAPLDWELPLSE----ALSDWDVEDFLSCLSSPPASLTDFSHSDPYLVHHDHT 304
            AA +  ++APLD EL  SE     LSDW+VED LS L SP AS  D   S    + HDH 
Sbjct: 31   AATEPDVKAPLDLELSPSENSVQELSDWEVEDLLSSLLSPSAS-RDVLGSSSSSILHDHN 89

Query: 305  YSLSQEYVSIDLDNEDYEKEGAQMTSLR-VEAPAEQEIGXXXXXXXXXXXXXXXXXXXXX 481
            YSL QE+VSIDLD E +EKEG  +T L   E  AEQE+                      
Sbjct: 90   YSLPQEHVSIDLDTESFEKEGFHVTPLPGEERAAEQEMSRLILTEEEKKLLEKEGLTLPS 149

Query: 482  XXXXXKMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLL 661
                 K+EEQVL+RVRRKIRNK++AQESR+KKKVYV  LESRVLKY+AQN ELQNKVQ L
Sbjct: 150  TLPLTKVEEQVLKRVRRKIRNKRAAQESRKKKKVYVVGLESRVLKYTAQNRELQNKVQRL 209

Query: 662  EEQNXXXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPAEH 841
            EEQN            MVI+ ANK SS STC+            PAMYSSD RGS PAE+
Sbjct: 210  EEQNLSLLDQLRKLQAMVIEIANKTSSGSTCVLVLVFSFCLLLVPAMYSSDARGSVPAEY 269

Query: 842  GVLSRQLRALPSEDVPQRDLPALQSEVPQDSSTHELQAPGH--------SCCLFHHMAWA 997
             VL R+LRALPSED  Q    AL SE+P DS+   L +  H        SC L+H    A
Sbjct: 270  VVLHRKLRALPSEDDHQPKPSALSSELPMDSTHQSLDSSEHMFLVSSNFSCVLYH----A 325

Query: 998  PGAESPMKLPL 1030
            P AE P+  PL
Sbjct: 326  PQAEQPLHWPL 336


>ref|NP_084356.1| androgen-induced basic leucine zipper [Mus musculus]
          Length = 370

 Score = 94.7 bits (234), Expect = 1e-19
 Identities = 60/157 (38%), Positives = 89/157 (56%), Gaps = 8/157 (5%)
 Frame = +2

Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676
           K EE++L+++RRKIRNK+SAQ+SRR+KK Y+  LESRV   S QN +LQ KVQ LE QN 
Sbjct: 188 KAEERILKKIRRKIRNKQSAQDSRRRKKEYLDGLESRVAACSEQNQKLQRKVQELERQNI 247

Query: 677 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMY----SSDTRGSPPAEHG 844
                      +  QT+++A+ +STC+            P+       S+ R      HG
Sbjct: 248 FLMEQVRQLQKLTAQTSSRAAQTSTCVLILLFSLALIILPSFSPFQGQSEARPEDYQLHG 307

Query: 845 VLSRQLRALPSEDVPQR-DLPALQS---EVPQDSSTH 943
           V+SR +  L  E+V +  + P L+S   E+P+  +T+
Sbjct: 308 VISRNI--LTHENVTENLESPVLKSKLEELPEAPTTN 342


>ref|NP_663340.1| cAMP responsive element binding protein 3-like 3 [Mus musculus]
          Length = 479

 Score = 86.3 bits (212), Expect = 5e-17
 Identities = 47/113 (41%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
 Frame = +2

Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676
           K EE+VL+++RRKIRNK+SAQESR+KKK Y+  LE+R+   +AQN ELQ KV  LE+QN 
Sbjct: 234 KYEERVLKKIRRKIRNKQSAQESRKKKKEYIDGLENRMSACTAQNQELQRKVLHLEKQNL 293

Query: 677 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAM--YSSDTRGSP 829
                      +V+Q+ +K + + TCI            P++  ++S+   SP
Sbjct: 294 SLLEQLKHLQALVVQSTSKPAHAGTCIAVLLLSFALIILPSISPFNSNKVDSP 346


>ref|NP_848776.1| cAMP responsive element binding protein 3-like 2 [Mus musculus]
          Length = 521

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 35/59 (59%), Positives = 47/59 (79%)
 Frame = +2

Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQN 673
           K EE+ L+++RRKI+NK SAQESRRKKK Y+ SLE +V   S +NLEL+ KV++LE+ N
Sbjct: 289 KSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLEDTN 347


>ref|XP_919654.2| PREDICTED: similar to cAMP responsive element binding protein
           3-like 2 [Mus musculus]
          Length = 477

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 35/59 (59%), Positives = 46/59 (77%)
 Frame = +2

Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQN 673
           K EE+ L+++RRKI+NK SAQESRRKKK Y+ SLE +V   S +NLEL+ KV++LE  N
Sbjct: 245 KSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTN 303


>ref|NP_036087.1| cAMP responsive element binding protein 3-like 1 [Mus musculus]
          Length = 507

 Score = 69.7 bits (169), Expect = 5e-12
 Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
 Frame = +2

Query: 497 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 676
           K EE+ L+RVRRKI+NK SAQESRRKKK YV  LE +V  Y+++N EL  KV+ LE  N 
Sbjct: 285 KAEEKALKRVRRKIKNKISAQESRRKKKEYVECLEKKVETYTSENNELWKKVETLETANR 344

Query: 677 XXXXXXXXXXXMVIQTANK-----ASSSSTCI 757
                      +V    ++     A+ + TC+
Sbjct: 345 TLLQQLQKLQTLVTSKISRPYKMAATQTGTCL 376


  Database: RefSeqMP
    Posted date:  Aug 2, 2006 12:58 AM
  Number of letters in database: 21,768,885
  Number of sequences in database:  45,328
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,912,229
Number of Sequences: 45328
Number of extensions: 1217880
Number of successful extensions: 7805
Number of sequences better than 1.0e-05: 6
Number of HSP's better than  0.0 without gapping: 5857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7737
length of database: 21,768,885
effective HSP length: 104
effective length of database: 17,054,773
effective search space used: 4246638477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)