Animal-Genome cDNA 20060611C-000853


Search to RefSeqSP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611C-000853
         (995 letters)

Database: RefSeqSP 
           1040 sequences; 434,620 total letters

Searching...done

 ***** No hits found ******

  Database: RefSeqSP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 434,620
  Number of sequences in database:  1040
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 826,117
Number of Sequences: 1040
Number of extensions: 18905
Number of successful extensions: 81
Number of sequences better than 1.0e-05: 0
Number of HSP's better than  0.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 434,620
effective HSP length: 77
effective length of database: 354,540
effective search space used: 90053160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqBP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611C-000853
         (995 letters)

Database: RefSeqBP 
           33,508 sequences; 16,112,626 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_776711.1| cAMP responsive element binding protein 3 (luma...   348   3e-96
Alignment   gi|XP_885877.1| PREDICTED: similar to cAMP responsive element b...   100   2e-21
Alignment   gi|XP_608017.2| PREDICTED: similar to cAMP responsive element b...   100   2e-21
Alignment   gi|NP_001029604.1| cAMP responsive element binding protein 3-li...    88   9e-18
Alignment   gi|XP_590741.2| PREDICTED: similar to cAMP responsive element b...    69   7e-12

>ref|NP_776711.1| cAMP responsive element binding protein 3 (luman) [Bos taurus]
          Length = 365

 Score =  348 bits (894), Expect = 3e-96
 Identities = 190/273 (69%), Positives = 200/273 (73%)
 Frame = +2

Query: 176 AAPDEALEAPLDWELPLSEALSDWDVEDFLSCLSSPPASLTDFSHSDPYLVHHDHTYSLS 355
           AAPDEAL +P DWELPLSE+LSDWDVEDFLSCL SPPA L  FS+SDP LV HDHTYSLS
Sbjct: 25  AAPDEALTSPPDWELPLSESLSDWDVEDFLSCLPSPPAVLNVFSNSDPCLVQHDHTYSLS 84

Query: 356 QEYVSIDLDNEDYEKEGAQMTSLRVEAPAEQEIGXXXXXXXXXXXXXXXXXXXXXXXXXX 535
           QE+VSIDLDNE YEKE AQMT LRVE PA+QEI                           
Sbjct: 85  QEHVSIDLDNESYEKERAQMTPLRVEEPADQEIARLILTEEEKRLLEKEGLTLPGMLPLT 144

Query: 536 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 715
           KMEEQVL+RVRRKIRNKKSAQESRRKKKVYVG LESRVLKY+AQNLELQNKVQLLEEQN 
Sbjct: 145 KMEEQVLKRVRRKIRNKKSAQESRRKKKVYVGGLESRVLKYTAQNLELQNKVQLLEEQNL 204

Query: 716 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPAEHGVLSR 895
                      MVIQTANKASSSSTC+            PAMYSSDTRGS PAEH VLSR
Sbjct: 205 SLLDQLRRLQAMVIQTANKASSSSTCVLVLLFSFCLLLVPAMYSSDTRGSLPAEHRVLSR 264

Query: 896 QLRALPSEDVPQRDLPALQSEVPQGSSTHELQA 994
           QLRALPSED PQ + PALQSEVP+ S   ELQA
Sbjct: 265 QLRALPSEDPPQLEPPALQSEVPKDSLNPELQA 297


>ref|XP_885877.1| PREDICTED: similar to cAMP responsive element binding protein
           3-like 4 isoform 2 [Bos taurus]
          Length = 257

 Score =  100 bits (248), Expect = 2e-21
 Identities = 57/128 (44%), Positives = 76/128 (59%), Gaps = 6/128 (4%)
 Frame = +2

Query: 536 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 715
           K EE+VL++VRRKIRNK+SAQ+SRR+KK Y+  LESRV   +AQN ELQ KVQ LE  N 
Sbjct: 74  KAEERVLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACAAQNQELQRKVQELERHNI 133

Query: 716 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPA------E 877
                      +++QT+NKA+ +STC+            P+   S  +G P A       
Sbjct: 134 SLVTQLRQLQMLIVQTSNKAAQTSTCVLILLFSLALIILPSF--SPFQGLPEAGPEDYQP 191

Query: 878 HGVLSRQL 901
           HGV+SR +
Sbjct: 192 HGVISRNI 199


>ref|XP_608017.2| PREDICTED: similar to cAMP responsive element binding protein
           3-like 4 isoform 1 [Bos taurus]
          Length = 257

 Score =  100 bits (248), Expect = 2e-21
 Identities = 57/128 (44%), Positives = 76/128 (59%), Gaps = 6/128 (4%)
 Frame = +2

Query: 536 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 715
           K EE+VL++VRRKIRNK+SAQ+SRR+KK Y+  LESRV   +AQN ELQ KVQ LE  N 
Sbjct: 74  KAEERVLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACAAQNQELQRKVQELERHNI 133

Query: 716 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPA------E 877
                      +++QT+NKA+ +STC+            P+   S  +G P A       
Sbjct: 134 SLVTQLRQLQMLIVQTSNKAAQTSTCVLILLFSLALIILPSF--SPFQGLPEAGPEDYQP 191

Query: 878 HGVLSRQL 901
           HGV+SR +
Sbjct: 192 HGVISRNI 199


>ref|NP_001029604.1| cAMP responsive element binding protein 3-like 3 [Bos taurus]
          Length = 456

 Score = 88.2 bits (217), Expect = 9e-18
 Identities = 58/156 (37%), Positives = 86/156 (55%), Gaps = 4/156 (2%)
 Frame = +2

Query: 536 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 715
           K EE++L+++RRKIRNK+SAQESR+KKK Y+  LE+R+   +AQN ELQ KV  LE+QN 
Sbjct: 233 KYEERMLKKIRRKIRNKQSAQESRKKKKEYIDGLETRMSACTAQNQELQRKVLHLEKQNL 292

Query: 716 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAM--YSSDTRGSPP--AEHG 883
                      +V+Q+ +K++ + TCI            P++  ++S+   SP   A   
Sbjct: 293 SLLEQLKKLQAIVVQSTSKSAQTGTCIAVLLFSFALIVLPSISPFASNRAESPGDFAPVR 352

Query: 884 VLSRQLRALPSEDVPQRDLPALQSEVPQGSSTHELQ 991
           V SR L    +  V     P  ++  P G +T  LQ
Sbjct: 353 VFSRTLHNDAASRVAPDTAPGSEAPGP-GPNTGALQ 387


>ref|XP_590741.2| PREDICTED: similar to cAMP responsive element binding protein
           3-like 1 [Bos taurus]
          Length = 520

 Score = 68.6 bits (166), Expect = 7e-12
 Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
 Frame = +2

Query: 536 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 715
           K EE+ L+RVRRKI+NK SAQESRRKKK YV  LE +V  ++++N EL  KV+ LE  N 
Sbjct: 285 KAEEKALKRVRRKIKNKISAQESRRKKKEYVECLEKKVETFTSENNELWKKVETLENANR 344

Query: 716 XXXXXXXXXXXMVIQTANK-----ASSSSTCI 796
                      +V    ++     A+ + TC+
Sbjct: 345 TLLQQLQKLQTLVTSKISRPYKMAATQTGTCL 376


  Database: RefSeqBP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 16,112,626
  Number of sequences in database:  33,508
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,474,826
Number of Sequences: 33508
Number of extensions: 755847
Number of successful extensions: 4696
Number of sequences better than 1.0e-05: 5
Number of HSP's better than  0.0 without gapping: 3707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4674
length of database: 16,112,626
effective HSP length: 102
effective length of database: 12,694,810
effective search space used: 2907111490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqHP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611C-000853
         (995 letters)

Database: RefSeqHP 
           39,411 sequences; 17,774,539 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_006359.3| cAMP responsive element binding protein 3 [Homo...   300   1e-81
Alignment   gi|NP_570968.1| cAMP responsive element binding protein 3-like ...   100   3e-21
Alignment   gi|NP_115996.1| cAMP responsive element binding protein 3-like ...    86   5e-17
Alignment   gi|NP_919047.2| cAMP responsive element binding protein 3-like ...    71   1e-12
Alignment   gi|NP_443086.1| cAMP responsive element binding protein 3-like ...    69   8e-12

>ref|NP_006359.3| cAMP responsive element binding protein 3 [Homo sapiens]
          Length = 371

 Score =  300 bits (769), Expect = 1e-81
 Identities = 165/269 (61%), Positives = 184/269 (68%)
 Frame = +2

Query: 179 APDEALEAPLDWELPLSEALSDWDVEDFLSCLSSPPASLTDFSHSDPYLVHHDHTYSLSQ 358
           APDEA+ APLDW LPLSE  SDW+V+D L  L SPPASL   S S+P LVHHDHTYSL +
Sbjct: 26  APDEAVRAPLDWALPLSEVPSDWEVDDLLCSLLSPPASLNILSSSNPCLVHHDHTYSLPR 85

Query: 359 EYVSIDLDNEDYEKEGAQMTSLRVEAPAEQEIGXXXXXXXXXXXXXXXXXXXXXXXXXXK 538
           E VS+DL++E   KEG QMT   +E  AEQEI                           K
Sbjct: 86  ETVSMDLESESCRKEGTQMTPQHMEELAEQEIARLVLTDEEKSLLEKEGLILPETLPLTK 145

Query: 539 MEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNXX 718
            EEQ+L+RVRRKIRNK+SAQESRRKKKVYVG LESRVLKY+AQN+ELQNKVQLLEEQN  
Sbjct: 146 TEEQILKRVRRKIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLS 205

Query: 719 XXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPAEHGVLSRQ 898
                     MVI+ +NK SSSSTCI            PAMYSSDTRGS PAEHGVLSRQ
Sbjct: 206 LLDQLRKLQAMVIEISNKTSSSSTCILVLLVSFCLLLVPAMYSSDTRGSLPAEHGVLSRQ 265

Query: 899 LRALPSEDVPQRDLPALQSEVPQGSSTHE 985
           LRALPSED  Q +LPALQSEVP+  STH+
Sbjct: 266 LRALPSEDPYQLELPALQSEVPK-DSTHQ 293


>ref|NP_570968.1| cAMP responsive element binding protein 3-like 4 [Homo sapiens]
          Length = 395

 Score =  100 bits (248), Expect = 3e-21
 Identities = 59/136 (43%), Positives = 78/136 (57%), Gaps = 4/136 (2%)
 Frame = +2

Query: 536 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 715
           K EE+VL++VRRKIRNK+SAQ+SRR+KK Y+  LESRV   SAQN ELQ KVQ LE  N 
Sbjct: 212 KAEERVLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNI 271

Query: 716 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPAE----HG 883
                      ++ QT+NKA+ +STC+            P+     +R    +E    HG
Sbjct: 272 SLVAQLRQLQTLIAQTSNKAAQTSTCVLILLFSLALIILPSFSPFQSRPEAGSEDYQPHG 331

Query: 884 VLSRQLRALPSEDVPQ 931
           V SR +  L  +DV +
Sbjct: 332 VTSRNI--LTHKDVTE 345


>ref|NP_115996.1| cAMP responsive element binding protein 3-like 3 [Homo sapiens]
          Length = 461

 Score = 85.9 bits (211), Expect = 5e-17
 Identities = 42/87 (48%), Positives = 61/87 (70%)
 Frame = +2

Query: 536 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 715
           K EE+VL+++RRKIRNK+SAQESR+KKK Y+  LE+R+   +AQN ELQ KV  LE+QN 
Sbjct: 238 KYEERVLKKIRRKIRNKQSAQESRKKKKEYIDGLETRMSACTAQNQELQRKVLHLEKQNL 297

Query: 716 XXXXXXXXXXXMVIQTANKASSSSTCI 796
                      +V+Q+ +K++ + TC+
Sbjct: 298 SLLEQLKKLQAIVVQSTSKSAQTGTCV 324


>ref|NP_919047.2| cAMP responsive element binding protein 3-like 2 [Homo sapiens]
          Length = 520

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 35/59 (59%), Positives = 46/59 (77%)
 Frame = +2

Query: 536 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQN 712
           K EE+ L+++RRKI+NK SAQESRRKKK Y+ SLE +V   S +NLEL+ KV++LE  N
Sbjct: 289 KSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTN 347


>ref|NP_443086.1| cAMP responsive element binding protein 3-like 1 [Homo sapiens]
          Length = 519

 Score = 68.6 bits (166), Expect = 8e-12
 Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
 Frame = +2

Query: 536 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 715
           K EE+ L+RVRRKI+NK SAQESRRKKK YV  LE +V  ++++N EL  KV+ LE  N 
Sbjct: 285 KAEEKALKRVRRKIKNKISAQESRRKKKEYVECLEKKVETFTSENNELWKKVETLENANR 344

Query: 716 XXXXXXXXXXXMVIQTANK-----ASSSSTCI 796
                      +V    ++     A+ + TC+
Sbjct: 345 TLLQQLQKLQTLVTNKISRPYKMAATQTGTCL 376


  Database: RefSeqHP
    Posted date:  Aug 2, 2006 12:57 AM
  Number of letters in database: 17,774,539
  Number of sequences in database:  39,411
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,937,630
Number of Sequences: 39411
Number of extensions: 897899
Number of successful extensions: 6253
Number of sequences better than 1.0e-05: 5
Number of HSP's better than  0.0 without gapping: 4742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6211
length of database: 17,774,539
effective HSP length: 102
effective length of database: 13,754,617
effective search space used: 3149807293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqCP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611C-000853
         (995 letters)

Database: RefSeqCP 
           33,732 sequences; 19,266,565 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_854750.1| PREDICTED: similar to cAMP responsive element b...   299   2e-81
Alignment   gi|XP_855139.1| PREDICTED: similar to cAMP responsive element b...    97   2e-20
Alignment   gi|XP_542164.2| PREDICTED: similar to cAMP responsive element b...    87   3e-17
Alignment   gi|XP_548490.2| PREDICTED: similar to cAMP responsive element b...    72   1e-12
Alignment   gi|XP_540756.2| PREDICTED: similar to cAMP responsive element b...    69   9e-12

>ref|XP_854750.1| PREDICTED: similar to cAMP responsive element binding protein 3
           [Canis familiaris]
          Length = 411

 Score =  299 bits (766), Expect = 2e-81
 Identities = 165/258 (63%), Positives = 179/258 (69%)
 Frame = +2

Query: 221 PLSEALSDWDVEDFLSCLSSPPASLTDFSHSDPYLVHHDHTYSLSQEYVSIDLDNEDYEK 400
           PLSEALS+W+ EDFLS + SPPASL   S SD  LVHHDHTYSLSQ++VSIDLD   Y K
Sbjct: 86  PLSEALSEWEAEDFLSSMLSPPASLNVLSSSDSCLVHHDHTYSLSQQHVSIDLDGGSYGK 145

Query: 401 EGAQMTSLRVEAPAEQEIGXXXXXXXXXXXXXXXXXXXXXXXXXXKMEEQVLRRVRRKIR 580
           E AQ T L+VE PAEQEI                           KMEEQVL RVRRKIR
Sbjct: 146 EEAQTTPLQVEEPAEQEIARLILTDEEKRLLEKEGLTLHGTLPLTKMEEQVLTRVRRKIR 205

Query: 581 NKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNXXXXXXXXXXXXMVIQ 760
           NKKSAQESRRKKKVY+G LE+RVLKY+AQNLELQNKVQLLEEQN            M+IQ
Sbjct: 206 NKKSAQESRRKKKVYLGGLENRVLKYTAQNLELQNKVQLLEEQNLSLLDQLRRLQAMLIQ 265

Query: 761 TANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPAEHGVLSRQLRALPSEDVPQRDL 940
            +NK SSSSTC+            PAMYSSDTRGS PAEHGVLSRQLRALPSED  Q +L
Sbjct: 266 ISNKTSSSSTCVLVLLFSFCLLIVPAMYSSDTRGSLPAEHGVLSRQLRALPSEDPHQLEL 325

Query: 941 PALQSEVPQGSSTHELQA 994
           PALQSEVP+ SS  ELQA
Sbjct: 326 PALQSEVPKDSSDQELQA 343


>ref|XP_855139.1| PREDICTED: similar to cAMP responsive element binding protein
           3-like 4 [Canis familiaris]
          Length = 384

 Score = 97.1 bits (240), Expect = 2e-20
 Identities = 56/128 (43%), Positives = 75/128 (58%), Gaps = 6/128 (4%)
 Frame = +2

Query: 536 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 715
           K EE+VL+++RRKIRNK+SAQ+SRR+KK Y+  LESRV   SAQN ELQ KVQ LE  N 
Sbjct: 201 KAEERVLKKIRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNI 260

Query: 716 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPA------E 877
                      ++ QT+NKA+ +STC+            P++  S  +G   A       
Sbjct: 261 SLVTQLRQLQTLIAQTSNKAAQTSTCVLILLFSLALIVLPSV--SPLQGLREAGSEDYQP 318

Query: 878 HGVLSRQL 901
           HGV+SR +
Sbjct: 319 HGVISRNI 326


>ref|XP_542164.2| PREDICTED: similar to cAMP responsive element binding protein
           3-like 3 [Canis familiaris]
          Length = 609

 Score = 86.7 bits (213), Expect = 3e-17
 Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
 Frame = +2

Query: 536 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 715
           K EE+VL+++RRKIRNK+SAQESR+KKK Y+  LE+R+   +AQN ELQ KV  LE+QN 
Sbjct: 358 KYEERVLKKIRRKIRNKQSAQESRKKKKEYIDGLETRMSACTAQNQELQRKVLHLEKQNL 417

Query: 716 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPA----MYSSDTRGSPPAEHG 883
                      +V+Q+ +K++ + TC+            P+    + +        A   
Sbjct: 418 SLLEQLKKLQAIVVQSTSKSAQTGTCLAVLLFSFALIVLPSISPFVANKAKHAGDYAPVR 477

Query: 884 VLSRQLRALPSEDVPQRDLPALQSEVPQ 967
           V SR L   P+  V    +P  ++  P+
Sbjct: 478 VFSRTLHNDPASRVAPDAIPGSEAPGPR 505


>ref|XP_548490.2| PREDICTED: similar to cAMP responsive element binding protein
           3-like 2 [Canis familiaris]
          Length = 393

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 10/127 (7%)
 Frame = +2

Query: 536 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 715
           K EE+ L+++RRKI+NK SAQESRRKKK Y+ SLE +V   S +NLEL+ KV++LE  N 
Sbjct: 186 KSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTNR 245

Query: 716 XXXXXXXXXXXMVIQTANK-----ASSSSTCIX-----XXXXXXXXXXXPAMYSSDTRGS 865
                      +V+   ++      + + TC+                    Y S T+ +
Sbjct: 246 TLLQQLQKLQTLVMGKVSRTCKLAGTQTGTCLMVVVLCFAVAFGSFFQGYGPYPSATKMA 305

Query: 866 PPAEHGV 886
            P++H V
Sbjct: 306 LPSQHSV 312


>ref|XP_540756.2| PREDICTED: similar to cAMP responsive element binding protein
           3-like 1 [Canis familiaris]
          Length = 725

 Score = 68.6 bits (166), Expect = 9e-12
 Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
 Frame = +2

Query: 536 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 715
           K EE+ L+RVRRKI+NK SAQESRRKKK YV  LE +V  ++++N EL  KV+ LE  N 
Sbjct: 490 KAEEKALKRVRRKIKNKISAQESRRKKKEYVECLEKKVETFTSENNELWKKVETLENANR 549

Query: 716 XXXXXXXXXXXMVIQTANK-----ASSSSTCI 796
                      +V    ++     A+ + TC+
Sbjct: 550 TLLQQLQKLQTLVTNKISRPYKMAATQTGTCL 581


  Database: RefSeqCP
    Posted date:  Aug 1, 2006  9:25 PM
  Number of letters in database: 19,266,565
  Number of sequences in database:  33,732
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,915,312
Number of Sequences: 33732
Number of extensions: 891159
Number of successful extensions: 5768
Number of sequences better than 1.0e-05: 5
Number of HSP's better than  0.0 without gapping: 4556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5740
length of database: 19,266,565
effective HSP length: 103
effective length of database: 15,792,169
effective search space used: 3600614532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqMP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611C-000853
         (995 letters)

Database: RefSeqMP 
           45,328 sequences; 21,768,885 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_038525.1| cAMP responsive element binding protein 3 [Mus ...   233   2e-61
Alignment   gi|NP_084356.1| androgen-induced basic leucine zipper [Mus musc...    96   8e-20
Alignment   gi|NP_663340.1| cAMP responsive element binding protein 3-like ...    86   5e-17
Alignment   gi|NP_848776.1| cAMP responsive element binding protein 3-like ...    72   9e-13
Alignment   gi|XP_919654.2| PREDICTED: similar to cAMP responsive element b...    71   2e-12
Alignment   gi|NP_036087.1| cAMP responsive element binding protein 3-like ...    70   4e-12

>ref|NP_038525.1| cAMP responsive element binding protein 3 [Mus musculus]
          Length = 379

 Score =  233 bits (594), Expect = 2e-61
 Identities = 145/275 (52%), Positives = 166/275 (60%), Gaps = 5/275 (1%)
 Frame = +2

Query: 176 AAPDEALEAPLDWELPLSE----ALSDWDVEDFLSCLSSPPASLTDFSHSDPYLVHHDHT 343
           AA +  ++APLD EL  SE     LSDW+VED LS L SP AS  D   S    + HDH 
Sbjct: 31  AATEPDVKAPLDLELSPSENSVQELSDWEVEDLLSSLLSPSAS-RDVLGSSSSSILHDHN 89

Query: 344 YSLSQEYVSIDLDNEDYEKEGAQMTSLR-VEAPAEQEIGXXXXXXXXXXXXXXXXXXXXX 520
           YSL QE+VSIDLD E +EKEG  +T L   E  AEQE+                      
Sbjct: 90  YSLPQEHVSIDLDTESFEKEGFHVTPLPGEERAAEQEMSRLILTEEEKKLLEKEGLTLPS 149

Query: 521 XXXXXKMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLL 700
                K+EEQVL+RVRRKIRNK++AQESR+KKKVYV  LESRVLKY+AQN ELQNKVQ L
Sbjct: 150 TLPLTKVEEQVLKRVRRKIRNKRAAQESRKKKKVYVVGLESRVLKYTAQNRELQNKVQRL 209

Query: 701 EEQNXXXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMYSSDTRGSPPAEH 880
           EEQN            MVI+ ANK SS STC+            PAMYSSD RGS PAE+
Sbjct: 210 EEQNLSLLDQLRKLQAMVIEIANKTSSGSTCVLVLVFSFCLLLVPAMYSSDARGSVPAEY 269

Query: 881 GVLSRQLRALPSEDVPQRDLPALQSEVPQGSSTHE 985
            VL R+LRALPSED  Q    AL SE+P   STH+
Sbjct: 270 VVLHRKLRALPSEDDHQPKPSALSSELPM-DSTHQ 303


>ref|NP_084356.1| androgen-induced basic leucine zipper [Mus musculus]
          Length = 370

 Score = 95.5 bits (236), Expect = 8e-20
 Identities = 60/157 (38%), Positives = 89/157 (56%), Gaps = 8/157 (5%)
 Frame = +2

Query: 536 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 715
           K EE++L+++RRKIRNK+SAQ+SRR+KK Y+  LESRV   S QN +LQ KVQ LE QN 
Sbjct: 188 KAEERILKKIRRKIRNKQSAQDSRRRKKEYLDGLESRVAACSEQNQKLQRKVQELERQNI 247

Query: 716 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAMY----SSDTRGSPPAEHG 883
                      +  QT+++A+ +STC+            P+       S+ R      HG
Sbjct: 248 FLMEQVRQLQKLTAQTSSRAAQTSTCVLILLFSLALIILPSFSPFQGQSEARPEDYQLHG 307

Query: 884 VLSRQLRALPSEDVPQR-DLPALQS---EVPQGSSTH 982
           V+SR +  L  E+V +  + P L+S   E+P+  +T+
Sbjct: 308 VISRNI--LTHENVTENLESPVLKSKLEELPEAPTTN 342


>ref|NP_663340.1| cAMP responsive element binding protein 3-like 3 [Mus musculus]
          Length = 479

 Score = 86.3 bits (212), Expect = 5e-17
 Identities = 47/113 (41%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
 Frame = +2

Query: 536 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 715
           K EE+VL+++RRKIRNK+SAQESR+KKK Y+  LE+R+   +AQN ELQ KV  LE+QN 
Sbjct: 234 KYEERVLKKIRRKIRNKQSAQESRKKKKEYIDGLENRMSACTAQNQELQRKVLHLEKQNL 293

Query: 716 XXXXXXXXXXXMVIQTANKASSSSTCIXXXXXXXXXXXXPAM--YSSDTRGSP 868
                      +V+Q+ +K + + TCI            P++  ++S+   SP
Sbjct: 294 SLLEQLKHLQALVVQSTSKPAHAGTCIAVLLLSFALIILPSISPFNSNKVDSP 346


>ref|NP_848776.1| cAMP responsive element binding protein 3-like 2 [Mus musculus]
          Length = 521

 Score = 72.0 bits (175), Expect = 9e-13
 Identities = 35/59 (59%), Positives = 47/59 (79%)
 Frame = +2

Query: 536 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQN 712
           K EE+ L+++RRKI+NK SAQESRRKKK Y+ SLE +V   S +NLEL+ KV++LE+ N
Sbjct: 289 KSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLEDTN 347


>ref|XP_919654.2| PREDICTED: similar to cAMP responsive element binding protein
           3-like 2 [Mus musculus]
          Length = 477

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 35/59 (59%), Positives = 46/59 (77%)
 Frame = +2

Query: 536 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQN 712
           K EE+ L+++RRKI+NK SAQESRRKKK Y+ SLE +V   S +NLEL+ KV++LE  N
Sbjct: 245 KSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKKVEVLENTN 303


>ref|NP_036087.1| cAMP responsive element binding protein 3-like 1 [Mus musculus]
          Length = 507

 Score = 69.7 bits (169), Expect = 4e-12
 Identities = 40/92 (43%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
 Frame = +2

Query: 536 KMEEQVLRRVRRKIRNKKSAQESRRKKKVYVGSLESRVLKYSAQNLELQNKVQLLEEQNX 715
           K EE+ L+RVRRKI+NK SAQESRRKKK YV  LE +V  Y+++N EL  KV+ LE  N 
Sbjct: 285 KAEEKALKRVRRKIKNKISAQESRRKKKEYVECLEKKVETYTSENNELWKKVETLETANR 344

Query: 716 XXXXXXXXXXXMVIQTANK-----ASSSSTCI 796
                      +V    ++     A+ + TC+
Sbjct: 345 TLLQQLQKLQTLVTSKISRPYKMAATQTGTCL 376


  Database: RefSeqMP
    Posted date:  Aug 2, 2006 12:58 AM
  Number of letters in database: 21,768,885
  Number of sequences in database:  45,328
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,229,010
Number of Sequences: 45328
Number of extensions: 1009965
Number of successful extensions: 6916
Number of sequences better than 1.0e-05: 6
Number of HSP's better than  0.0 without gapping: 5124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6820
length of database: 21,768,885
effective HSP length: 104
effective length of database: 17,054,773
effective search space used: 3871433471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)