BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-012172
(852 letters)
Database: RefSeqSP
1040 sequences; 434,620 total letters
Searching...done
***** No hits found ******
Database: RefSeqSP
Posted date: Aug 1, 2006 7:14 PM
Number of letters in database: 434,620
Number of sequences in database: 1040
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 857,653
Number of Sequences: 1040
Number of extensions: 23170
Number of successful extensions: 70
Number of sequences better than 1.0e-05: 0
Number of HSP's better than 0.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 434,620
effective HSP length: 76
effective length of database: 355,580
effective search space used: 73605060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqBP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-012172
(852 letters)
Database: RefSeqBP
33,508 sequences; 16,112,626 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001029873.1| DAZ associated protein 2 [Bos taurus] 121 6e-28
>ref|NP_001029873.1| DAZ associated protein 2 [Bos taurus]
Length = 168
Score = 121 bits (304), Expect = 6e-28
Identities = 71/162 (43%), Positives = 87/162 (53%)
Frame = +3
Query: 105 YPTQPTQRVHPGSKRAHPPSMHLPLAPTQMDALPVHTYLYRPICAHGLPATLPCMLPVLP 284
YPTQPT V P +P ++HLP AP DA P ++ LYRP H AT+P M P
Sbjct: 7 YPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFP 66
Query: 285 AP*MYLRMTQWVADVPVRPSLWMTNYLVGPIHLPEQRWRKEGRKHARDLYLARPTAGYIL 464
+YL M Q VA P+ ++ M Y VGPI+ P EG A + A TAG I
Sbjct: 67 GASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGATAGNIP 126
Query: 465 LPLDACPMNAARLACMQGTNVLLTGRKAYLCMAGTDATYSGW 590
P CP NAA+LA MQG NVL+T RK M G+D Y+ W
Sbjct: 127 PPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW 168
Score = 70.5 bits (171), Expect = 2e-12
Identities = 51/167 (30%), Positives = 69/167 (41%)
Frame = +2
Query: 83 LNEQRKYLSHPTYPARAPWKQACAPT*HAPSARSNTDGRSACSYLSLPTYLRARAACHTP 262
+N + +Y + PTYP + P T H P A TD A S L P+++ AA
Sbjct: 1 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT 60
Query: 263 MYAACLACSLNVPSHDPVGGGRTCTTLPLDD*LSGRTHPSA*TKMAEGRKETCA*LISSS 442
M AA SL +P V G +T+P+ G +P T + EG + A + +
Sbjct: 61 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA 120
Query: 443 TDGRIHPSSSGCMPNECCSAGMHAGNECPPHRTEGILMHGWHGCYLL 583
T G I P GC PN A M N R M G G Y +
Sbjct: 121 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTI 167
Database: RefSeqBP
Posted date: Aug 1, 2006 7:14 PM
Number of letters in database: 16,112,626
Number of sequences in database: 33,508
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,516,731
Number of Sequences: 33508
Number of extensions: 867845
Number of successful extensions: 2859
Number of sequences better than 1.0e-05: 1
Number of HSP's better than 0.0 without gapping: 2555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2856
length of database: 16,112,626
effective HSP length: 100
effective length of database: 12,761,826
effective search space used: 2335414158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqHP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-012172
(852 letters)
Database: RefSeqHP
39,411 sequences; 17,774,539 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_055579.1| DAZ associated protein 2 [Homo sapiens] 121 6e-28
>ref|NP_055579.1| DAZ associated protein 2 [Homo sapiens]
Length = 168
Score = 121 bits (304), Expect = 6e-28
Identities = 71/162 (43%), Positives = 87/162 (53%)
Frame = +3
Query: 105 YPTQPTQRVHPGSKRAHPPSMHLPLAPTQMDALPVHTYLYRPICAHGLPATLPCMLPVLP 284
YPTQPT V P +P ++HLP AP DA P ++ LYRP H AT+P M P
Sbjct: 7 YPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFP 66
Query: 285 AP*MYLRMTQWVADVPVRPSLWMTNYLVGPIHLPEQRWRKEGRKHARDLYLARPTAGYIL 464
+YL M Q VA P+ ++ M Y VGPI+ P EG A + A TAG I
Sbjct: 67 GASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGATAGNIP 126
Query: 465 LPLDACPMNAARLACMQGTNVLLTGRKAYLCMAGTDATYSGW 590
P CP NAA+LA MQG NVL+T RK M G+D Y+ W
Sbjct: 127 PPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW 168
Score = 70.5 bits (171), Expect = 2e-12
Identities = 51/167 (30%), Positives = 69/167 (41%)
Frame = +2
Query: 83 LNEQRKYLSHPTYPARAPWKQACAPT*HAPSARSNTDGRSACSYLSLPTYLRARAACHTP 262
+N + +Y + PTYP + P T H P A TD A S L P+++ AA
Sbjct: 1 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT 60
Query: 263 MYAACLACSLNVPSHDPVGGGRTCTTLPLDD*LSGRTHPSA*TKMAEGRKETCA*LISSS 442
M AA SL +P V G +T+P+ G +P T + EG + A + +
Sbjct: 61 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSTVLVEGGYDAGARFGAGA 120
Query: 443 TDGRIHPSSSGCMPNECCSAGMHAGNECPPHRTEGILMHGWHGCYLL 583
T G I P GC PN A M N R M G G Y +
Sbjct: 121 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTI 167
Database: RefSeqHP
Posted date: Aug 2, 2006 12:57 AM
Number of letters in database: 17,774,539
Number of sequences in database: 39,411
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,588,548
Number of Sequences: 39411
Number of extensions: 1004770
Number of successful extensions: 3177
Number of sequences better than 1.0e-05: 1
Number of HSP's better than 0.0 without gapping: 2828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3169
length of database: 17,774,539
effective HSP length: 101
effective length of database: 13,794,028
effective search space used: 2510513096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqCP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-012172
(852 letters)
Database: RefSeqCP
33,732 sequences; 19,266,565 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_860910.1| PREDICTED: similar to DAZ associated protein 2 ... 121 7e-28
Alignment gi|XP_534799.1| PREDICTED: similar to DAZ associated protein 2 ... 121 7e-28
>ref|XP_860910.1| PREDICTED: similar to DAZ associated protein 2 isoform 2 [Canis
familiaris]
Length = 168
Score = 121 bits (304), Expect = 7e-28
Identities = 71/162 (43%), Positives = 87/162 (53%)
Frame = +3
Query: 105 YPTQPTQRVHPGSKRAHPPSMHLPLAPTQMDALPVHTYLYRPICAHGLPATLPCMLPVLP 284
YPTQPT V P +P ++HLP AP DA P ++ LYRP H AT+P M P
Sbjct: 7 YPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFP 66
Query: 285 AP*MYLRMTQWVADVPVRPSLWMTNYLVGPIHLPEQRWRKEGRKHARDLYLARPTAGYIL 464
+YL M Q VA P+ ++ M Y VGPI+ P EG A + A TAG I
Sbjct: 67 GASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSAVLVEGGYDAGARFGAGATAGNIP 126
Query: 465 LPLDACPMNAARLACMQGTNVLLTGRKAYLCMAGTDATYSGW 590
P CP NAA+LA MQG NVL+T RK M G+D Y+ W
Sbjct: 127 PPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW 168
Score = 68.6 bits (166), Expect = 7e-12
Identities = 50/167 (29%), Positives = 68/167 (40%)
Frame = +2
Query: 83 LNEQRKYLSHPTYPARAPWKQACAPT*HAPSARSNTDGRSACSYLSLPTYLRARAACHTP 262
+N + +Y + PTYP + P T H P A TD A S L P+++ AA
Sbjct: 1 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT 60
Query: 263 MYAACLACSLNVPSHDPVGGGRTCTTLPLDD*LSGRTHPSA*TKMAEGRKETCA*LISSS 442
M AA SL +P V G +T+P+ G +P + EG + A + +
Sbjct: 61 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSAVLVEGGYDAGARFGAGA 120
Query: 443 TDGRIHPSSSGCMPNECCSAGMHAGNECPPHRTEGILMHGWHGCYLL 583
T G I P GC PN A M N R M G G Y +
Sbjct: 121 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTI 167
>ref|XP_534799.1| PREDICTED: similar to DAZ associated protein 2 isoform 1 [Canis
familiaris]
Length = 168
Score = 121 bits (304), Expect = 7e-28
Identities = 71/162 (43%), Positives = 87/162 (53%)
Frame = +3
Query: 105 YPTQPTQRVHPGSKRAHPPSMHLPLAPTQMDALPVHTYLYRPICAHGLPATLPCMLPVLP 284
YPTQPT V P +P ++HLP AP DA P ++ LYRP H AT+P M P
Sbjct: 7 YPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFP 66
Query: 285 AP*MYLRMTQWVADVPVRPSLWMTNYLVGPIHLPEQRWRKEGRKHARDLYLARPTAGYIL 464
+YL M Q VA P+ ++ M Y VGPI+ P EG A + A TAG I
Sbjct: 67 GASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSAVLVEGGYDAGARFGAGATAGNIP 126
Query: 465 LPLDACPMNAARLACMQGTNVLLTGRKAYLCMAGTDATYSGW 590
P CP NAA+LA MQG NVL+T RK M G+D Y+ W
Sbjct: 127 PPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW 168
Score = 68.6 bits (166), Expect = 7e-12
Identities = 50/167 (29%), Positives = 68/167 (40%)
Frame = +2
Query: 83 LNEQRKYLSHPTYPARAPWKQACAPT*HAPSARSNTDGRSACSYLSLPTYLRARAACHTP 262
+N + +Y + PTYP + P T H P A TD A S L P+++ AA
Sbjct: 1 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT 60
Query: 263 MYAACLACSLNVPSHDPVGGGRTCTTLPLDD*LSGRTHPSA*TKMAEGRKETCA*LISSS 442
M AA SL +P V G +T+P+ G +P + EG + A + +
Sbjct: 61 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSAVLVEGGYDAGARFGAGA 120
Query: 443 TDGRIHPSSSGCMPNECCSAGMHAGNECPPHRTEGILMHGWHGCYLL 583
T G I P GC PN A M N R M G G Y +
Sbjct: 121 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTI 167
Database: RefSeqCP
Posted date: Aug 1, 2006 9:25 PM
Number of letters in database: 19,266,565
Number of sequences in database: 33,732
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,886,552
Number of Sequences: 33732
Number of extensions: 1007948
Number of successful extensions: 3079
Number of sequences better than 1.0e-05: 2
Number of HSP's better than 0.0 without gapping: 2742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3072
length of database: 19,266,565
effective HSP length: 102
effective length of database: 15,825,901
effective search space used: 2864488081
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqMP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-012172
(852 letters)
Database: RefSeqMP
45,328 sequences; 21,768,885 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_036003.2| DAZ associated protein 2 [Mus musculus] 121 8e-28
>ref|NP_036003.2| DAZ associated protein 2 [Mus musculus]
Length = 168
Score = 121 bits (304), Expect = 8e-28
Identities = 71/162 (43%), Positives = 87/162 (53%)
Frame = +3
Query: 105 YPTQPTQRVHPGSKRAHPPSMHLPLAPTQMDALPVHTYLYRPICAHGLPATLPCMLPVLP 284
YPTQPT V P +P ++HLP AP DA P ++ LYRP H AT+P M P
Sbjct: 7 YPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPTMSAAFP 66
Query: 285 AP*MYLRMTQWVADVPVRPSLWMTNYLVGPIHLPEQRWRKEGRKHARDLYLARPTAGYIL 464
+YL M Q VA P+ ++ M Y VGPI+ P EG A + A TAG I
Sbjct: 67 GASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSAVLVEGGYDAGARFGAGATAGNIP 126
Query: 465 LPLDACPMNAARLACMQGTNVLLTGRKAYLCMAGTDATYSGW 590
P CP NAA+LA MQG NVL+T RK M G+D Y+ W
Sbjct: 127 PPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW 168
Score = 68.6 bits (166), Expect = 8e-12
Identities = 50/167 (29%), Positives = 68/167 (40%)
Frame = +2
Query: 83 LNEQRKYLSHPTYPARAPWKQACAPT*HAPSARSNTDGRSACSYLSLPTYLRARAACHTP 262
+N + +Y + PTYP + P T H P A TD A S L P+++ AA
Sbjct: 1 MNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPAYSELYRPSFVHPGAATVPT 60
Query: 263 MYAACLACSLNVPSHDPVGGGRTCTTLPLDD*LSGRTHPSA*TKMAEGRKETCA*LISSS 442
M AA SL +P V G +T+P+ G +P + EG + A + +
Sbjct: 61 MSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPGSAVLVEGGYDAGARFGAGA 120
Query: 443 TDGRIHPSSSGCMPNECCSAGMHAGNECPPHRTEGILMHGWHGCYLL 583
T G I P GC PN A M N R M G G Y +
Sbjct: 121 TAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTI 167
Database: RefSeqMP
Posted date: Aug 2, 2006 12:58 AM
Number of letters in database: 21,768,885
Number of sequences in database: 45,328
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,790,118
Number of Sequences: 45328
Number of extensions: 1187451
Number of successful extensions: 3882
Number of sequences better than 1.0e-05: 1
Number of HSP's better than 0.0 without gapping: 3361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3865
length of database: 21,768,885
effective HSP length: 102
effective length of database: 17,145,429
effective search space used: 3103322649
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)