BLASTX 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 20060611S-020080 (1115 letters) Database: RefSeqBP 33,508 sequences; 16,112,626 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Alignment gi|XP_871162.1| PREDICTED: similar to WD repeat domain 5, parti... 138 7e-33 Alignment gi|NP_777088.1| platelet-activating factor acetylhydrolase, iso... 80 4e-15 Alignment gi|XP_608583.2| PREDICTED: similar to CG7568-PA [Bos taurus] 79 8e-15 Alignment gi|XP_603152.1| PREDICTED: similar to TAF5-like RNA polymerase ... 78 1e-14 Alignment gi|XP_582098.2| PREDICTED: similar to TAF5-like RNA polymerase ... 77 2e-14 Alignment gi|NP_001033186.1| WD repeat domain 61 [Bos taurus] 77 3e-14 Alignment gi|XP_587553.2| PREDICTED: similar to TAF5-like RNA polymerase ... 75 7e-14 Alignment gi|NP_001033649.1| WD repeat domain 51A [Bos taurus] 75 9e-14 Alignment gi|XP_603483.2| PREDICTED: similar to WD repeat domain 51B [Bos... 74 2e-13 Alignment gi|XP_883815.1| PREDICTED: similar to F-box protein FBW7 isofor... 74 2e-13 >ref|XP_871162.1| PREDICTED: similar to WD repeat domain 5, partial [Bos taurus] Length = 440 Score = 138 bits (348), Expect = 7e-33 Identities = 70/82 (85%), Positives = 72/82 (87%) Frame = +3 Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488 LKFTLAGHTKAVSS KF+PNGEWLASSSA KLI WGAY KFEKT+SG LGISDVA S Sbjct: 304 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 363 Query: 489 SDSNLLVSASDDKTLNIWDVSS 554 SDSNLLVSASDDKTL IWDVSS Sbjct: 364 SDSNLLVSASDDKTLKIWDVSS 385 >ref|NP_777088.1| platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit (45kD) [Bos taurus] Length = 410 Score = 79.7 bits (195), Expect = 4e-15 Identities = 41/135 (30%), Positives = 66/135 (48%) Frame = +3 Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491 K+ L+GH V+ F P + S+S I W FE+TL G + + D++ Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDH 160 Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671 LL S S D T+ +WD +C+ T++GH H V + IVS S +++ + + Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220 Query: 672 VKTGKCLTTLLAHSD 716 V+TG C+ T H + Sbjct: 221 VQTGYCVKTFTGHRE 235 Score = 77.4 bits (189), Expect = 2e-14 Identities = 45/131 (34%), Positives = 66/131 (50%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 TL GHT +V F +G+ LAS SA I W + +T+ G +S VA + Sbjct: 145 TLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +VSAS DKT+ +W+V +G C+ T GH +V + LI S S ++V + V Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264 Query: 678 TGKCLTTLLAH 710 T +C L H Sbjct: 265 TKECKAELREH 275 Score = 77.0 bits (188), Expect = 2e-14 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 20/153 (13%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 T+ GH VSS PNG+ + S+S K I W KT +G + V + D Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSN----------------- 626 L+ S S+D+T+ +W V++ +C L H H V C ++ +S+ Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGK 306 Query: 627 ---LIVSGSFHESVMILDVKTGKCLTTLLAHSD 716 ++SGS +++ + DV TG CL TL+ H + Sbjct: 307 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339 Score = 66.6 bits (161), Expect = 3e-11 Identities = 33/103 (32%), Positives = 52/103 (50%) Frame = +3 Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548 G +L S S K I W TL G + V S ++S +DDKTL +WD Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +C+ TLN H H+V +FH + +V+GS ++V + + + Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 >ref|XP_608583.2| PREDICTED: similar to CG7568-PA [Bos taurus] Length = 441 Score = 78.6 bits (192), Expect = 8e-15 Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 5/175 (2%) Frame = +3 Query: 318 TLAGHTKAVSSAKFT-PNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494 TL GH V + F P G+ +A+ S K W K T G + I ++ + Sbjct: 155 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQ 214 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674 S L+ + S D T +WD+ SG+ + TL GHS + +F+ N I++GSF +V + + Sbjct: 215 STLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEA 274 Query: 675 KTGKCLTTLLAHSDPRLSRSL*PGRFPDCFKRYHG----LCWIWDTPFGPCLKNL 827 TG+ + TL+ H +S ++ DC G C +WD G C+ L Sbjct: 275 DTGRKVYTLIGHC-AEISSAVFNW---DCSLILTGSMDKTCKLWDAVNGKCVATL 325 Score = 77.4 bits (189), Expect = 2e-14 Identities = 50/171 (29%), Positives = 71/171 (41%) Frame = +3 Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494 FTL GH+ + S F +G + + S + W A + TL G IS + D Sbjct: 239 FTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWD 298 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674 +L+++ S DKT +WD +GKC+ TL GH + F LI + S + I Sbjct: 299 CSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSA 358 Query: 675 KTGKCLTTLLAHSDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNL 827 T +C+T L H S P IWD G CL+ L Sbjct: 359 ATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVL 409 Score = 74.3 bits (181), Expect = 2e-13 Identities = 42/134 (31%), Positives = 67/134 (50%) Frame = +3 Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494 +TL GH +SSA F + + + S K W A + K TL+G I D Sbjct: 281 YTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYT 340 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674 L+ +AS D T I+ ++ +C+ L GH + +F+ Q N +++GS ++ I D Sbjct: 341 GKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDA 400 Query: 675 KTGKCLTTLLAHSD 716 +TG+CL L H+D Sbjct: 401 QTGQCLQVLEGHTD 414 Score = 73.2 bits (178), Expect = 4e-13 Identities = 37/133 (27%), Positives = 64/133 (48%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 T GHT + F P +A+ S W + TL+G S I ++ ++ Sbjct: 198 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSG 257 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 N +++ S D T+ +W+ +G+ + TL GH + F+ +LI++GS ++ + D Sbjct: 258 NRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAV 317 Query: 678 TGKCLTTLLAHSD 716 GKC+ TL H D Sbjct: 318 NGKCVATLTGHDD 330 Score = 72.0 bits (175), Expect = 8e-13 Identities = 36/109 (33%), Positives = 59/109 (54%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 TL GH + + F G+ +A++SA + A R+ L G IS ++ + Sbjct: 324 TLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQG 383 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGS 644 N L++ S DKT IWD +G+CL L GH+ +F C F+ + ++I++GS Sbjct: 384 NRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGS 432 Score = 57.8 bits (138), Expect = 2e-08 Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 1/92 (1%) Frame = +3 Query: 441 KTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNF-HL 617 K L L +++VA + + ++ S D+T +WD +SG+ L TL GH + V+ F + Sbjct: 112 KVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNP 171 Query: 618 QSNLIVSGSFHESVMILDVKTGKCLTTLLAHS 713 + I +GSF ++ + V+TGKC T H+ Sbjct: 172 YGDKIATGSFDKTCKLWSVETGKCYHTFRGHT 203 >ref|XP_603152.1| PREDICTED: similar to TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta) [Bos taurus] Length = 600 Score = 77.8 bits (190), Expect = 1e-14 Identities = 41/119 (34%), Positives = 61/119 (51%) Frame = +3 Query: 324 AGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNL 503 AGH V KF PN +LA+ S K + W A + +G + +A S + Sbjct: 434 AGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQY 493 Query: 504 LVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKT 680 LVSA +D+ L +WD++SG L+GH+ + F L S++I S S SV I D+K+ Sbjct: 494 LVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKS 552 Score = 53.9 bits (128), Expect = 2e-07 Identities = 44/169 (26%), Positives = 60/169 (35%) Frame = +3 Query: 321 LAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSN 500 L GH V S +F P+ L S S I W G + + D+ S S Sbjct: 349 LLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSL 408 Query: 501 LLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKT 680 SAS D T +W L GH V C FH SN + +GS ++V + + Sbjct: 409 FFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 468 Query: 681 GKCLTTLLAHSDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNL 827 G + H P + P L +WD G K+L Sbjct: 469 GNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDL 517 Score = 51.6 bits (122), Expect = 1e-06 Identities = 32/130 (24%), Positives = 51/130 (39%) Frame = +3 Query: 327 GHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLL 506 GH V +P+ + AS+S W + +G G+ V +SN L Sbjct: 393 GHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYL 452 Query: 507 VSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGK 686 + S DKT+ +W G + GH V C F +VS + + + D+ +G Sbjct: 453 ATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGT 512 Query: 687 CLTTLLAHSD 716 L H+D Sbjct: 513 LYKDLHGHTD 522 >ref|XP_582098.2| PREDICTED: similar to TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta) [Bos taurus] Length = 577 Score = 77.0 bits (188), Expect = 2e-14 Identities = 40/124 (32%), Positives = 60/124 (48%) Frame = +3 Query: 324 AGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNL 503 AGH V KF PN +LA+ S K + W + +G + +A S +S Sbjct: 411 AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNSKY 470 Query: 504 LVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTG 683 L SA +D+ L +WD++SG L GH+ + F S+LI S S SV + D+++ Sbjct: 471 LASAGEDQRLKLWDLASGTLYKELRGHTDSITSLTFSSDSSLIASASMDNSVRVWDIRST 530 Query: 684 KCLT 695 C T Sbjct: 531 HCST 534 Score = 58.5 bits (140), Expect = 9e-09 Identities = 30/87 (34%), Positives = 46/87 (52%) Frame = +3 Query: 327 GHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLL 506 GH V S F+PN ++LAS+ + + W K L G + I+ + SSDS+L+ Sbjct: 454 GHRGPVLSLAFSPNSKYLASAGEDQRLKLWDLASGTLYKELRGHTDSITSLTFSSDSSLI 513 Query: 507 VSASDDKTLNIWDVSSGKCLITLNGHS 587 SAS D ++ +WD+ S C +G S Sbjct: 514 ASASMDNSVRVWDIRSTHCSTPADGSS 540 Score = 53.5 bits (127), Expect = 3e-07 Identities = 38/141 (26%), Positives = 53/141 (37%) Frame = +3 Query: 321 LAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSN 500 L GH V S +F + L S S I W G + + D+ S S Sbjct: 326 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSL 385 Query: 501 LLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKT 680 S S D+T +W L GH V C FH SN + +GS ++V + + Sbjct: 386 YFASGSHDRTARLWSFDRTYPLRIFAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQ 445 Query: 681 GKCLTTLLAHSDPRLSRSL*P 743 G + H P LS + P Sbjct: 446 GNSVRLFTGHRGPVLSLAFSP 466 Score = 48.5 bits (114), Expect = 9e-06 Identities = 30/130 (23%), Positives = 49/130 (37%) Frame = +3 Query: 327 GHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLL 506 GH V +P+ + AS S + W + +G + V +SN L Sbjct: 370 GHAYPVWDLDISPHSLYFASGSHDRTARLWSFDRTYPLRIFAGHLADVDCVKFHPNSNYL 429 Query: 507 VSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGK 686 + S DKT+ +W G + GH V F S + S + + + D+ +G Sbjct: 430 ATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNSKYLASAGEDQRLKLWDLASGT 489 Query: 687 CLTTLLAHSD 716 L H+D Sbjct: 490 LYKELRGHTD 499 >ref|NP_001033186.1| WD repeat domain 61 [Bos taurus] Length = 305 Score = 76.6 bits (187), Expect = 3e-14 Identities = 46/135 (34%), Positives = 70/135 (51%) Frame = +3 Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491 +++L K + S ++P+G++LAS + +IN + K TL G ++ I + S Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200 Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671 DS LLV+ASDD + I+DV TL+GH+ +V F VS S +SV + D Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260 Query: 672 VKTGKCLTTLLAHSD 716 V T C+ T H D Sbjct: 261 VGTRTCVHTFFDHQD 275 Score = 63.5 bits (153), Expect = 3e-10 Identities = 36/121 (29%), Positives = 58/121 (47%) Frame = +3 Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488 L TL GH + S F+P+ + L ++S I + H TLSG + + +VA Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241 Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668 D VS+S DK++ +WDV + C+ T H V+ ++ + IVS + + I Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301 Query: 669 D 671 D Sbjct: 302 D 302 Score = 61.6 bits (148), Expect = 1e-09 Identities = 43/159 (27%), Positives = 70/159 (44%) Frame = +3 Query: 357 FTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLN 536 F+P+ ++LA+ + +N +G K E +L I +A S D L S + D +N Sbjct: 114 FSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 173 Query: 537 IWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSD 716 I+D+++GK L TL GH+ + F S L+V+ S + I DV+ TL H+ Sbjct: 174 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 233 Query: 717 PRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLID 833 L+ + P +WD C+ D Sbjct: 234 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 272 Score = 55.5 bits (132), Expect = 8e-08 Identities = 40/145 (27%), Positives = 64/145 (44%) Frame = +3 Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488 L+++L GH V S + ASSS I W + K K++ + +A S Sbjct: 56 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFS 115 Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668 DS L + + +NI+ V SGK +L+ ++ + + SG+ + I Sbjct: 116 PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175 Query: 669 DVKTGKCLTTLLAHSDPRLSRSL*P 743 D+ TGK L TL H+ P S + P Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSP 200 >ref|XP_587553.2| PREDICTED: similar to TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta) [Bos taurus] Length = 310 Score = 75.5 bits (184), Expect = 7e-14 Identities = 38/124 (30%), Positives = 59/124 (47%) Frame = +3 Query: 324 AGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNL 503 AGH V KF PN +LA+ S K + W + +G + +A S + Sbjct: 144 AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKY 203 Query: 504 LVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTG 683 L SA +D+ L +WD++SG L GH+ + F S+L+ S S SV + D+++ Sbjct: 204 LASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSS 263 Query: 684 KCLT 695 C T Sbjct: 264 HCST 267 Score = 59.3 bits (142), Expect = 5e-09 Identities = 30/87 (34%), Positives = 46/87 (52%) Frame = +3 Query: 327 GHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLL 506 GH V S F+PNG++LAS+ + + W K L G + I+ + S DS+L+ Sbjct: 187 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLV 246 Query: 507 VSASDDKTLNIWDVSSGKCLITLNGHS 587 SAS D ++ +WD+ S C +G S Sbjct: 247 ASASMDNSVRVWDIRSSHCSTPADGSS 273 Score = 54.7 bits (130), Expect = 1e-07 Identities = 39/141 (27%), Positives = 54/141 (38%) Frame = +3 Query: 321 LAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSN 500 L GH V S +F + L S S I W G + + D+ S S Sbjct: 59 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSL 118 Query: 501 LLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKT 680 SAS D+T +W L GH V C FH SN + +GS ++V + + Sbjct: 119 YFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQ 178 Query: 681 GKCLTTLLAHSDPRLSRSL*P 743 G + H P LS + P Sbjct: 179 GNSVRLFTGHRGPVLSLAFSP 199 >ref|NP_001033649.1| WD repeat domain 51A [Bos taurus] Length = 407 Score = 75.1 bits (183), Expect = 9e-14 Identities = 41/132 (31%), Positives = 63/132 (47%) Frame = +3 Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494 + AGH AV+ F+P+G LAS S K + W + + + V SD Sbjct: 55 YRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSD 114 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674 V+ASDDKT+ +W K L +L+ H ++V C F LIVS S ++V + D Sbjct: 115 GQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 174 Query: 675 KTGKCLTTLLAH 710 + +C+ + H Sbjct: 175 TSRECVHSYCEH 186 Score = 74.3 bits (181), Expect = 2e-13 Identities = 40/128 (31%), Positives = 63/128 (49%) Frame = +3 Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509 HT V S F +G+ ++S K + W + +KF +LS + S D L+V Sbjct: 102 HTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIV 161 Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKC 689 SASDDKT+ +WD +S +C+ + H +V +FH I + +V + DV+T + Sbjct: 162 SASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRL 221 Query: 690 LTTLLAHS 713 L HS Sbjct: 222 LQHYQLHS 229 Score = 66.2 bits (160), Expect = 4e-11 Identities = 39/135 (28%), Positives = 63/135 (46%) Frame = +3 Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494 F+L+ H V AKF+P+G + S+S K + W R+ + ++ V Sbjct: 139 FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPS 198 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674 + +A D T+ +WDV + + L HS V +FH N +V+ S ++ ILD+ Sbjct: 199 GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDL 258 Query: 675 KTGKCLTTLLAHSDP 719 G+ L TL H P Sbjct: 259 MEGRLLYTLHGHQGP 273 Score = 50.8 bits (120), Expect = 2e-06 Identities = 30/112 (26%), Positives = 47/112 (41%) Frame = +3 Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509 H V+ F P+G +A++ + W + + S ++ ++ N LV Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 245 Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMI 665 +AS D TL I D+ G+ L TL+GH F SG E VM+ Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297 >ref|XP_603483.2| PREDICTED: similar to WD repeat domain 51B [Bos taurus] Length = 495 Score = 73.9 bits (180), Expect = 2e-13 Identities = 39/126 (30%), Positives = 63/126 (50%) Frame = +3 Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494 F GH ++S +F+P G LAS+S + I W R + + V S+D Sbjct: 71 FRYVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSAD 130 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674 L SAS+DK++ +W++ + L +L H+H+V C F LIVS S +++ I D Sbjct: 131 GQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 190 Query: 675 KTGKCL 692 +C+ Sbjct: 191 TNKQCV 196 Score = 73.6 bits (179), Expect = 3e-13 Identities = 42/135 (31%), Positives = 66/135 (48%) Frame = +3 Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494 ++L HT V AKF+P+G + S S K I W +++ S + VA + + Sbjct: 155 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPN 214 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674 + SA D T+ IWD+ K L HS V C +FH N +++ S ++ ILD+ Sbjct: 215 GTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDL 274 Query: 675 KTGKCLTTLLAHSDP 719 G+ + TL H+ P Sbjct: 275 LEGRLIYTLQGHTGP 289 Score = 71.2 bits (173), Expect = 1e-12 Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 3/131 (2%) Frame = +3 Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509 HT V S F+ +G++LAS+S K I W Y ++F +L + + S D L+V Sbjct: 118 HTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 177 Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCN---FHLQSNLIVSGSFHESVMILDVKT 680 S S+DKT+ IWD ++ +C +N S +V N F+ I S +V I D++ Sbjct: 178 SCSEDKTIKIWDTTNKQC---VNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRV 234 Query: 681 GKCLTTLLAHS 713 K L HS Sbjct: 235 NKLLQHYQVHS 245 >ref|XP_883815.1| PREDICTED: similar to F-box protein FBW7 isoform 1 isoform 6 [Bos taurus] Length = 706 Score = 73.9 bits (180), Expect = 2e-13 Identities = 38/114 (33%), Positives = 62/114 (54%) Frame = +3 Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548 G + S S + W A K +TL G + G+ + N+++S S D+TL +W+ Sbjct: 390 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVW--SSQMRDNIIISGSTDRTLKVWNA 447 Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAH 710 +G+C+ TL GH+ V C HL +VSGS ++ + D++TG+CL L+ H Sbjct: 448 ETGECIHTLYGHTSTVRC--MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGH 499 Score = 66.2 bits (160), Expect = 4e-11 Identities = 45/134 (33%), Positives = 65/134 (48%), Gaps = 1/134 (0%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS-D 494 TL GHT V S++ N + S S + + W A + TL G + S V C Sbjct: 415 TLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHT---STVRCMHLH 469 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674 +VS S D TL +WD+ +G+CL L GH V C + +VSG++ V + D Sbjct: 470 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDP 527 Query: 675 KTGKCLTTLLAHSD 716 +T CL TL H++ Sbjct: 528 ETETCLHTLQGHTN 541 Score = 64.3 bits (155), Expect = 2e-10 Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 3/132 (2%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 TL GHT V S +F +G + S S I W TL+G S + Sbjct: 535 TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-- 590 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNG---HSHYVFCCNFHLQSNLIVSGSFHESVMIL 668 N+LVS + D T+ IWD+ +G+CL TL G H V C F+ N +++ S +V + Sbjct: 591 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLW 648 Query: 669 DVKTGKCLTTLL 704 D+KTG+ + L+ Sbjct: 649 DLKTGEFIRNLV 660 Score = 58.9 bits (141), Expect = 7e-09 Identities = 50/175 (28%), Positives = 74/175 (42%), Gaps = 5/175 (2%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS-D 494 TL GHT V + + + S S + W + L G ++ V C D Sbjct: 455 TLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGH---VAAVRCVQYD 509 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674 +VS + D + +WD + CL TL GH++ V+ F +VSGS S+ + DV Sbjct: 510 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDV 567 Query: 675 KTGKCLTTLLAH----SDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNL 827 +TG C+ TL H S L ++ D + IWD G CL+ L Sbjct: 568 ETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVK------IWDIKTGQCLQTL 616 Database: RefSeqBP Posted date: Aug 1, 2006 7:14 PM Number of letters in database: 16,112,626 Number of sequences in database: 33,508 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,901,815 Number of Sequences: 33508 Number of extensions: 887809 Number of successful extensions: 4694 Number of sequences better than 1.0e-05: 10 Number of HSP's better than 0.0 without gapping: 3243 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4431 length of database: 16,112,626 effective HSP length: 103 effective length of database: 12,661,302 effective search space used: 3393228936 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
Search to RefSeqSP
BLASTX 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 20060611S-020080 (1115 letters) Database: RefSeqSP 1040 sequences; 434,620 total letters Searching...done Score E Sequences producing significant alignments: (bits) Value Alignment gi|NP_999415.1| platelet-activating factor acetylhydrolase Ib-a... 79 3e-16 Alignment gi|NP_999497.1| G-beta like protein [Sus scrofa] 55 3e-09 >ref|NP_999415.1| platelet-activating factor acetylhydrolase Ib-alpha subunit [Sus scrofa] Length = 410 Score = 78.6 bits (192), Expect = 3e-16 Identities = 40/135 (29%), Positives = 66/135 (48%) Frame = +3 Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491 K+ L+GH V+ F P + S+S I W FE+TL G + + D++ Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160 Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671 LL S S D T+ +WD +C+ T++GH H V + IVS + +++ + + Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWE 220 Query: 672 VKTGKCLTTLLAHSD 716 V+TG C+ T H + Sbjct: 221 VQTGYCVKTFTGHRE 235 Score = 76.3 bits (186), Expect = 1e-15 Identities = 44/131 (33%), Positives = 66/131 (50%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 TL GHT +V F +G+ LAS SA I W + +T+ G +S VA + Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +VSA+ DKT+ +W+V +G C+ T GH +V + LI S S ++V + V Sbjct: 205 DHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264 Query: 678 TGKCLTTLLAH 710 T +C L H Sbjct: 265 TKECKAELREH 275 Score = 75.9 bits (185), Expect = 2e-15 Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 20/153 (13%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 T+ GH VSS PNG+ + S++ K I W KT +G + V + D Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSN----------------- 626 L+ S S+D+T+ +W V++ +C L H H V C ++ +S+ Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGK 306 Query: 627 ---LIVSGSFHESVMILDVKTGKCLTTLLAHSD 716 ++SGS +++ + DV TG CL TL+ H + Sbjct: 307 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339 Score = 66.6 bits (161), Expect = 1e-12 Identities = 33/103 (32%), Positives = 52/103 (50%) Frame = +3 Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548 G +L S S K I W TL G + V S ++S +DDKTL +WD Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +C+ TLN H H+V +FH + +V+GS ++V + + + Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 Score = 64.7 bits (156), Expect = 4e-12 Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 20/151 (13%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLS-----------GPSL 464 T GH + V + +G +AS S + + W ++ + L P Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 288 Query: 465 GISDVACSSDSN---------LLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHL 617 S ++ ++ S L+S S DKT+ +WDVS+G CL+TL GH ++V FH Sbjct: 289 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 348 Query: 618 QSNLIVSGSFHESVMILDVKTGKCLTTLLAH 710 I+S + +++ + D K +C+ TL AH Sbjct: 349 GGKFILSCADDKTLRVWDYKNKRCMKTLNAH 379 >ref|NP_999497.1| G-beta like protein [Sus scrofa] Length = 317 Score = 55.1 bits (131), Expect = 3e-09 Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 6/137 (4%) Frame = +3 Query: 309 LKFTLAGHTKAVSSAKFTPN-GEWLASSSAHKLINTWGAYHRKF-----EKTLSGPSLGI 470 L+ TL GH V+ TP + + S+S K I W + ++ L G S + Sbjct: 7 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66 Query: 471 SDVACSSDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFH 650 SDV SSD +S S D TL +WD+++G GH+ V F + IVSGS Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126 Query: 651 ESVMILDVKTGKCLTTL 701 +++ + + G C T+ Sbjct: 127 KTIKLWNT-LGVCKYTV 142 Score = 49.3 bits (116), Expect = 2e-07 Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 3/128 (2%) Frame = +3 Query: 327 GHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHR-KFEKTLSGPSLGISDVACSSDSN- 500 GHTK V S F+ + + S S K I W K+ S +S V S +S+ Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 162 Query: 501 -LLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 ++VS DK + +W++++ K GH+ Y+ +L SG M+ D+ Sbjct: 163 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222 Query: 678 TGKCLTTL 701 GK L TL Sbjct: 223 EGKHLYTL 230 Database: RefSeqSP Posted date: Aug 1, 2006 7:14 PM Number of letters in database: 434,620 Number of sequences in database: 1040 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 924,191 Number of Sequences: 1040 Number of extensions: 22640 Number of successful extensions: 89 Number of sequences better than 1.0e-05: 2 Number of HSP's better than 0.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 84 length of database: 434,620 effective HSP length: 78 effective length of database: 353,500 effective search space used: 103575500 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
Search to RefSeqCP
BLASTX 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 20060611S-020080 (1115 letters) Database: RefSeqCP 33,732 sequences; 19,266,565 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Alignment gi|XP_850117.1| PREDICTED: similar to WD repeat domain 5 [Canis... 248 8e-66 Alignment gi|XP_534593.2| PREDICTED: similar to CG7568-PA [Canis familiaris] 81 2e-15 Alignment gi|XP_537775.2| PREDICTED: similar to platelet-activating facto... 80 5e-15 Alignment gi|XP_868519.1| PREDICTED: similar to platelet-activating facto... 80 5e-15 Alignment gi|XP_854482.1| PREDICTED: similar to platelet-activating facto... 80 5e-15 Alignment gi|XP_868508.1| PREDICTED: similar to platelet-activating facto... 80 5e-15 Alignment gi|XP_541857.2| PREDICTED: similar to WD repeat domain 51A isof... 77 2e-14 Alignment gi|XP_536215.2| PREDICTED: similar to WD repeat domain 61 isofo... 77 4e-14 Alignment gi|XP_859995.1| PREDICTED: similar to WD repeat domain 51A isof... 76 5e-14 Alignment gi|XP_546100.2| PREDICTED: similar to TAF5-like RNA polymerase ... 76 7e-14 >ref|XP_850117.1| PREDICTED: similar to WD repeat domain 5 [Canis familiaris] Length = 334 Score = 248 bits (633), Expect = 8e-66 Identities = 154/294 (52%), Positives = 173/294 (58%) Frame = +3 Query: 201 MATAENKXXXXXXXXXXXXXXXXXXSKXXXXXXXXXLKFTLAGHTKAVSSAKFTPNGEWL 380 MAT E K SK LKFTLAGHTKAVSS KF+PNGEWL Sbjct: 1 MATEEKKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWL 60 Query: 381 ASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDVSSGK 560 ASSSA KLI WGAY KFEKT+SG LGISDVA SSDSNLLVSASDDKTL IWDVSSGK Sbjct: 61 ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120 Query: 561 CLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSDPRLSRSL* 740 CL TL GHS+YVFCCNF+ QSNLIVSGSF ESV I DVKTGKCL TL AHSDP + Sbjct: 121 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180 Query: 741 PGRFPDCFKRYHGLCWIWDTPFGPCLKNLIDDYNSPLVLRKILSQRQVLFVPYP*KHP*T 920 Y GLC C+K ++DD N P+ K S + + Sbjct: 181 RDGSLIVSSSYDGLCGKTGNAASRCMKLILDDDNPPVSFVK-FSPNGKYILAATLDNTLK 239 Query: 921 SLNYPKENVLKKVTGPPKLKKNCEFSKFSFVPGRGK*MLFGLQKKLPFFYFLYT 1082 +Y K LK TG K +K C F+ FS V G GK ++ G + L + + L T Sbjct: 240 LWDYSKGKCLKTYTG-HKNEKYCIFANFS-VTG-GKWIVSGSEDNLVYIWNLQT 290 Score = 67.0 bits (162), Expect = 3e-11 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 4/146 (2%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWG-AYHRKFEKTLSGPSLGISDVACSSD 494 TL H+ VS+ F +G + SSS L G A R + L + +S V S + Sbjct: 166 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCGKTGNAASRCMKLILDDDNPPVSFVKFSPN 225 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFC--CNFHLQSNL-IVSGSFHESVMI 665 +++A+ D TL +WD S GKCL T GH + +C NF + IVSGS V I Sbjct: 226 GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285 Query: 666 LDVKTGKCLTTLLAHSDPRLSRSL*P 743 +++T + + L H+D +S + P Sbjct: 286 WNLQTKEIVQKLQGHTDVVISTACHP 311 >ref|XP_534593.2| PREDICTED: similar to CG7568-PA [Canis familiaris] Length = 415 Score = 80.9 bits (198), Expect = 2e-15 Identities = 52/171 (30%), Positives = 73/171 (42%) Frame = +3 Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494 FTL GH+ + S F +G+ + + S + W A + TL G IS + D Sbjct: 213 FTLRGHSAEIISLSFNTSGDRIVTGSFDHTVAVWEADTGRKVYTLIGHCAEISSALFNWD 272 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674 +L+++ S DKT +WD S+GKC+ TL GH + F LI + S + + Sbjct: 273 CSLILTGSMDKTCMLWDASNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVFSA 332 Query: 675 KTGKCLTTLLAHSDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNL 827 T KCLT L H S P IWD G CL+ L Sbjct: 333 ATRKCLTKLEGHEGEISKISFNPQGNRLLTGSADETARIWDAQTGQCLQVL 383 Score = 79.3 bits (194), Expect = 6e-15 Identities = 53/175 (30%), Positives = 82/175 (46%), Gaps = 5/175 (2%) Frame = +3 Query: 318 TLAGHTKAVSSAKFT-PNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494 TL GH V + F P G+ +A+ S K W K T G + I ++ + Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQ 188 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674 S L+ + S D T +WD+ SG+ + TL GHS + +F+ + IV+GSF +V + + Sbjct: 189 STLVATGSMDTTAKLWDIQSGEEVFTLRGHSAEIISLSFNTSGDRIVTGSFDHTVAVWEA 248 Query: 675 KTGKCLTTLLAHSDPRLSRSL*PGRFPDCFKRYHG----LCWIWDTPFGPCLKNL 827 TG+ + TL+ H +S +L DC G C +WD G C+ L Sbjct: 249 DTGRKVYTLIGHC-AEISSALFNW---DCSLILTGSMDKTCMLWDASNGKCVATL 299 Score = 77.0 bits (188), Expect = 3e-14 Identities = 44/134 (32%), Positives = 67/134 (50%) Frame = +3 Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494 +TL GH +SSA F + + + S K W A + K TL+G I D Sbjct: 255 YTLIGHCAEISSALFNWDCSLILTGSMDKTCMLWDASNGKCVATLTGHDDEILDSCFDYT 314 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674 L+ +AS D T ++ ++ KCL L GH + +F+ Q N +++GS E+ I D Sbjct: 315 GKLIATASADGTARVFSAATRKCLTKLEGHEGEISKISFNPQGNRLLTGSADETARIWDA 374 Query: 675 KTGKCLTTLLAHSD 716 +TG+CL L H+D Sbjct: 375 QTGQCLQVLEGHTD 388 Score = 73.2 bits (178), Expect = 4e-13 Identities = 38/133 (28%), Positives = 64/133 (48%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 T GHT + F P +A+ S W + TL G S I ++ ++ Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLRGHSAEIISLSFNTSG 231 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +V+ S D T+ +W+ +G+ + TL GH + F+ +LI++GS ++ M+ D Sbjct: 232 DRIVTGSFDHTVAVWEADTGRKVYTLIGHCAEISSALFNWDCSLILTGSMDKTCMLWDAS 291 Query: 678 TGKCLTTLLAHSD 716 GKC+ TL H D Sbjct: 292 NGKCVATLTGHDD 304 Score = 71.2 bits (173), Expect = 2e-12 Identities = 36/109 (33%), Positives = 59/109 (54%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 TL GH + + F G+ +A++SA + A RK L G IS ++ + Sbjct: 298 TLTGHDDEILDSCFDYTGKLIATASADGTARVFSAATRKCLTKLEGHEGEISKISFNPQG 357 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGS 644 N L++ S D+T IWD +G+CL L GH+ +F C F+ + ++I++GS Sbjct: 358 NRLLTGSADETARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGS 406 Score = 57.8 bits (138), Expect = 2e-08 Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 1/92 (1%) Frame = +3 Query: 441 KTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNF-HL 617 K L L +++VA + + ++ S D+T +WD +SG+ L TL GH + V+ F + Sbjct: 86 KVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNP 145 Query: 618 QSNLIVSGSFHESVMILDVKTGKCLTTLLAHS 713 + I +GSF ++ + V+TGKC T H+ Sbjct: 146 YGDKIATGSFDKTCKLWSVETGKCYHTFRGHT 177 >ref|XP_537775.2| PREDICTED: similar to platelet-activating factor acetylhydrolase beta subunit isoform 1 [Canis familiaris] Length = 372 Score = 79.7 bits (195), Expect = 5e-15 Identities = 41/135 (30%), Positives = 66/135 (48%) Frame = +3 Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491 K+ L+GH V+ F P + S+S I W FE+TL G + + D++ Sbjct: 63 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 122 Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671 LL S S D T+ +WD +C+ T++GH H V + IVS S +++ + + Sbjct: 123 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 182 Query: 672 VKTGKCLTTLLAHSD 716 V+TG C+ T H + Sbjct: 183 VQTGYCVKTFTGHRE 197 Score = 77.4 bits (189), Expect = 2e-14 Identities = 45/131 (34%), Positives = 66/131 (50%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 TL GHT +V F +G+ LAS SA I W + +T+ G +S VA + Sbjct: 107 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 166 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +VSAS DKT+ +W+V +G C+ T GH +V + LI S S ++V + V Sbjct: 167 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 226 Query: 678 TGKCLTTLLAH 710 T +C L H Sbjct: 227 TKECKAELREH 237 Score = 77.0 bits (188), Expect = 3e-14 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 20/153 (13%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 T+ GH VSS PNG+ + S+S K I W KT +G + V + D Sbjct: 149 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 208 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSN----------------- 626 L+ S S+D+T+ +W V++ +C L H H V C ++ +S+ Sbjct: 209 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGK 268 Query: 627 ---LIVSGSFHESVMILDVKTGKCLTTLLAHSD 716 ++SGS +++ + DV TG CL TL+ H + Sbjct: 269 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 301 Score = 66.6 bits (161), Expect = 4e-11 Identities = 33/103 (32%), Positives = 52/103 (50%) Frame = +3 Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548 G +L S S K I W TL G + V S ++S +DDKTL +WD Sbjct: 270 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 329 Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +C+ TLN H H+V +FH + +V+GS ++V + + + Sbjct: 330 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 372 >ref|XP_868519.1| PREDICTED: similar to platelet-activating factor acetylhydrolase beta subunit isoform 5 [Canis familiaris] Length = 415 Score = 79.7 bits (195), Expect = 5e-15 Identities = 41/135 (30%), Positives = 66/135 (48%) Frame = +3 Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491 K+ L+GH V+ F P + S+S I W FE+TL G + + D++ Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160 Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671 LL S S D T+ +WD +C+ T++GH H V + IVS S +++ + + Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220 Query: 672 VKTGKCLTTLLAHSD 716 V+TG C+ T H + Sbjct: 221 VQTGYCVKTFTGHRE 235 Score = 79.0 bits (193), Expect = 8e-15 Identities = 59/201 (29%), Positives = 85/201 (42%), Gaps = 26/201 (12%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 TL GHT +V F +G+ LAS SA I W + +T+ G +S VA + Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +VSAS DKT+ +W+V +G C+ T GH +V + LI S S ++V + V Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264 Query: 678 TGKCLTTLLAH--------------------------SDPRLSRSL*PGRFPDCFKRYHG 779 T +C L H +PR +S PG F R Sbjct: 265 TKECKAELREHEHVVECISWAPESSYSSISEATGSEEENPRTKKSGKPGPFLLSGSRDKT 324 Query: 780 LCWIWDTPFGPCLKNLIDDYN 842 + +WD G CL L+ N Sbjct: 325 I-KMWDVSTGMCLMTLVGHDN 344 Score = 66.6 bits (161), Expect = 4e-11 Identities = 33/103 (32%), Positives = 52/103 (50%) Frame = +3 Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548 G +L S S K I W TL G + V S ++S +DDKTL +WD Sbjct: 313 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 372 Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +C+ TLN H H+V +FH + +V+GS ++V + + + Sbjct: 373 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 415 Score = 63.5 bits (153), Expect = 3e-10 Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 25/156 (16%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTL--------------SG 455 T GH + V + +G +AS S + + W ++ + L Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 288 Query: 456 PSLGISDVACSSDSN-----------LLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFC 602 IS+ S + N L+S S DKT+ +WDVS+G CL+TL GH ++V Sbjct: 289 SYSSISEATGSEEENPRTKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 348 Query: 603 CNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAH 710 FH I+S + +++ + D K +C+ TL AH Sbjct: 349 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 384 >ref|XP_854482.1| PREDICTED: similar to platelet-activating factor acetylhydrolase beta subunit isoform 2 [Canis familiaris] Length = 410 Score = 79.7 bits (195), Expect = 5e-15 Identities = 41/135 (30%), Positives = 66/135 (48%) Frame = +3 Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491 K+ L+GH V+ F P + S+S I W FE+TL G + + D++ Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160 Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671 LL S S D T+ +WD +C+ T++GH H V + IVS S +++ + + Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220 Query: 672 VKTGKCLTTLLAHSD 716 V+TG C+ T H + Sbjct: 221 VQTGYCVKTFTGHRE 235 Score = 77.4 bits (189), Expect = 2e-14 Identities = 45/131 (34%), Positives = 66/131 (50%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 TL GHT +V F +G+ LAS SA I W + +T+ G +S VA + Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +VSAS DKT+ +W+V +G C+ T GH +V + LI S S ++V + V Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264 Query: 678 TGKCLTTLLAH 710 T +C L H Sbjct: 265 TKECKAELREH 275 Score = 77.0 bits (188), Expect = 3e-14 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 20/153 (13%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 T+ GH VSS PNG+ + S+S K I W KT +G + V + D Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSN----------------- 626 L+ S S+D+T+ +W V++ +C L H H V C ++ +S+ Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGK 306 Query: 627 ---LIVSGSFHESVMILDVKTGKCLTTLLAHSD 716 ++SGS +++ + DV TG CL TL+ H + Sbjct: 307 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339 Score = 66.6 bits (161), Expect = 4e-11 Identities = 33/103 (32%), Positives = 52/103 (50%) Frame = +3 Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548 G +L S S K I W TL G + V S ++S +DDKTL +WD Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +C+ TLN H H+V +FH + +V+GS ++V + + + Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 >ref|XP_868508.1| PREDICTED: similar to platelet-activating factor acetylhydrolase beta subunit isoform 3 [Canis familiaris] Length = 345 Score = 79.7 bits (195), Expect = 5e-15 Identities = 41/135 (30%), Positives = 66/135 (48%) Frame = +3 Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491 K+ L+GH V+ F P + S+S I W FE+TL G + + D++ Sbjct: 36 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 95 Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671 LL S S D T+ +WD +C+ T++GH H V + IVS S +++ + + Sbjct: 96 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 155 Query: 672 VKTGKCLTTLLAHSD 716 V+TG C+ T H + Sbjct: 156 VQTGYCVKTFTGHRE 170 Score = 77.4 bits (189), Expect = 2e-14 Identities = 45/131 (34%), Positives = 66/131 (50%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 TL GHT +V F +G+ LAS SA I W + +T+ G +S VA + Sbjct: 80 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 139 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +VSAS DKT+ +W+V +G C+ T GH +V + LI S S ++V + V Sbjct: 140 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 199 Query: 678 TGKCLTTLLAH 710 T +C L H Sbjct: 200 TKECKAELREH 210 Score = 77.0 bits (188), Expect = 3e-14 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 20/153 (13%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 T+ GH VSS PNG+ + S+S K I W KT +G + V + D Sbjct: 122 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 181 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSN----------------- 626 L+ S S+D+T+ +W V++ +C L H H V C ++ +S+ Sbjct: 182 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGK 241 Query: 627 ---LIVSGSFHESVMILDVKTGKCLTTLLAHSD 716 ++SGS +++ + DV TG CL TL+ H + Sbjct: 242 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 274 Score = 66.6 bits (161), Expect = 4e-11 Identities = 33/103 (32%), Positives = 52/103 (50%) Frame = +3 Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548 G +L S S K I W TL G + V S ++S +DDKTL +WD Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302 Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +C+ TLN H H+V +FH + +V+GS ++V + + + Sbjct: 303 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345 >ref|XP_541857.2| PREDICTED: similar to WD repeat domain 51A isoform 1 [Canis familiaris] Length = 406 Score = 77.4 bits (189), Expect = 2e-14 Identities = 42/128 (32%), Positives = 65/128 (50%) Frame = +3 Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509 HT V S F +G+ L ++S K + W + +KF +LS + S D L+V Sbjct: 102 HTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIV 161 Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKC 689 SASDDKT+ +WD +S +C+ + H +V +FH I + S +V + DV+T + Sbjct: 162 SASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRL 221 Query: 690 LTTLLAHS 713 L HS Sbjct: 222 LQHYQLHS 229 Score = 76.3 bits (186), Expect = 5e-14 Identities = 42/132 (31%), Positives = 64/132 (48%) Frame = +3 Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494 + AGH AV+ F+P+G LAS S K + W + + + V SD Sbjct: 55 YRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSD 114 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674 LV+ASDDKT+ +W K L +L+ H ++V C F LIVS S ++V + D Sbjct: 115 GQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDK 174 Query: 675 KTGKCLTTLLAH 710 + +C+ + H Sbjct: 175 TSRECVHSYCEH 186 Score = 65.5 bits (158), Expect = 9e-11 Identities = 38/135 (28%), Positives = 64/135 (47%) Frame = +3 Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494 F+L+ H V A+F+P+G + S+S K + W R+ + ++ V Sbjct: 139 FSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPS 198 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674 + +AS D T+ +WDV + + L HS V +FH N +++ S ++ ILD+ Sbjct: 199 GTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDL 258 Query: 675 KTGKCLTTLLAHSDP 719 G+ L TL H P Sbjct: 259 MEGRLLYTLHGHQGP 273 Score = 51.2 bits (121), Expect = 2e-06 Identities = 30/112 (26%), Positives = 48/112 (42%) Frame = +3 Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509 H V+ F P+G +A++S + W + + S ++ ++ N L+ Sbjct: 186 HGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLL 245 Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMI 665 +AS D TL I D+ G+ L TL+GH F SG E VM+ Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297 >ref|XP_536215.2| PREDICTED: similar to WD repeat domain 61 isoform 1 [Canis familiaris] Length = 305 Score = 76.6 bits (187), Expect = 4e-14 Identities = 46/135 (34%), Positives = 70/135 (51%) Frame = +3 Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491 +++L K + S ++P+G++LAS + +IN + K TL G ++ I + S Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200 Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671 DS LLV+ASDD + I+DV TL+GH+ +V F VS S +SV + D Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260 Query: 672 VKTGKCLTTLLAHSD 716 V T C+ T H D Sbjct: 261 VGTRTCVHTFFDHQD 275 Score = 63.2 bits (152), Expect = 5e-10 Identities = 35/121 (28%), Positives = 58/121 (47%) Frame = +3 Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488 L TL GH + S F+P+ + L ++S I + H TLSG + + +VA Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241 Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668 D VS+S DK++ +WDV + C+ T H V+ ++ + IVS + + + Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301 Query: 669 D 671 D Sbjct: 302 D 302 Score = 61.6 bits (148), Expect = 1e-09 Identities = 43/159 (27%), Positives = 70/159 (44%) Frame = +3 Query: 357 FTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLN 536 F+P+ ++LA+ + +N +G K E +L I +A S D L S + D +N Sbjct: 114 FSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 173 Query: 537 IWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSD 716 I+D+++GK L TL GH+ + F S L+V+ S + I DV+ TL H+ Sbjct: 174 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 233 Query: 717 PRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLID 833 L+ + P +WD C+ D Sbjct: 234 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 272 Score = 55.1 bits (131), Expect = 1e-07 Identities = 40/145 (27%), Positives = 64/145 (44%) Frame = +3 Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488 L+++L GH V S + ASSS I W + K K++ + +A S Sbjct: 56 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFS 115 Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668 DS L + + +NI+ V SGK +L+ ++ + + SG+ + I Sbjct: 116 PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175 Query: 669 DVKTGKCLTTLLAHSDPRLSRSL*P 743 D+ TGK L TL H+ P S + P Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSP 200 >ref|XP_859995.1| PREDICTED: similar to WD repeat domain 51A isoform 2 [Canis familiaris] Length = 388 Score = 76.3 bits (186), Expect = 5e-14 Identities = 42/132 (31%), Positives = 64/132 (48%) Frame = +3 Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494 + AGH AV+ F+P+G LAS S K + W + + + V SD Sbjct: 55 YRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSD 114 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674 LV+ASDDKT+ +W K L +L+ H ++V C F LIVS S ++V + D Sbjct: 115 GQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDK 174 Query: 675 KTGKCLTTLLAH 710 + +C+ + H Sbjct: 175 TSRECVHSYCEH 186 Score = 73.9 bits (180), Expect = 3e-13 Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 24/154 (15%) Frame = +3 Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509 HT V S F +G+ L ++S K + W + +KF +LS + S D L+V Sbjct: 102 HTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIV 161 Query: 510 SASDDKTLNIWDVSSGKCLIT------------------------LNGHSHYVFCCNFHL 617 SASDDKT+ +WD +S +C+ + +N HS V +FH Sbjct: 162 SASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCISSSGVNVHSAAVNALSFHP 221 Query: 618 QSNLIVSGSFHESVMILDVKTGKCLTTLLAHSDP 719 N +++ S ++ ILD+ G+ L TL H P Sbjct: 222 SGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGP 255 Score = 51.2 bits (121), Expect = 2e-06 Identities = 39/141 (27%), Positives = 56/141 (39%), Gaps = 24/141 (17%) Frame = +3 Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTL--------------S 452 F+L+ H V A+F+P+G + S+S K + W R+ + S Sbjct: 139 FSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPS 198 Query: 453 GPSLGISDVACSS----------DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFC 602 G + S V S N L++AS D TL I D+ G+ L TL+GH Sbjct: 199 GTCISSSGVNVHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATT 258 Query: 603 CNFHLQSNLIVSGSFHESVMI 665 F SG E VM+ Sbjct: 259 VAFSRTGEYFASGGSDEQVMV 279 >ref|XP_546100.2| PREDICTED: similar to TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L (PCAF associated factor 65 beta) (PAF65-beta) [Canis familiaris] Length = 589 Score = 75.9 bits (185), Expect = 7e-14 Identities = 40/124 (32%), Positives = 59/124 (47%) Frame = +3 Query: 324 AGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNL 503 AGH V KF PN +LA+ S K + W A + +G + +A S + Sbjct: 423 AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKY 482 Query: 504 LVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTG 683 L SA +D+ L +WD++SG L GH+ + F S+LI S S SV + D++ Sbjct: 483 LASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNT 542 Query: 684 KCLT 695 C T Sbjct: 543 YCST 546 Score = 57.4 bits (137), Expect = 2e-08 Identities = 29/87 (33%), Positives = 46/87 (52%) Frame = +3 Query: 327 GHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLL 506 GH V S F+PNG++LAS+ + + W K L G + I+ + S DS+L+ Sbjct: 466 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLI 525 Query: 507 VSASDDKTLNIWDVSSGKCLITLNGHS 587 SAS D ++ +WD+ + C +G S Sbjct: 526 ASASMDNSVRVWDIRNTYCSTPADGSS 552 Score = 52.4 bits (124), Expect = 8e-07 Identities = 38/141 (26%), Positives = 53/141 (37%) Frame = +3 Query: 321 LAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSN 500 L GH V S +F + L S S I W G + + D+ S S Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSL 397 Query: 501 LLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKT 680 S S D+T +W L GH V C FH SN + +GS ++V + + Sbjct: 398 YFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 457 Query: 681 GKCLTTLLAHSDPRLSRSL*P 743 G + H P LS + P Sbjct: 458 GNSVRLFTGHRGPVLSLAFSP 478 Database: RefSeqCP Posted date: Aug 1, 2006 9:25 PM Number of letters in database: 19,266,565 Number of sequences in database: 33,732 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,105,551 Number of Sequences: 33732 Number of extensions: 1046356 Number of successful extensions: 5424 Number of sequences better than 1.0e-05: 10 Number of HSP's better than 0.0 without gapping: 3722 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5062 length of database: 19,266,565 effective HSP length: 104 effective length of database: 15,758,437 effective search space used: 4207502679 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
Search to RefSeqHP
BLASTX 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 20060611S-020080 (1115 letters) Database: RefSeqHP 39,411 sequences; 17,774,539 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Alignment gi|NP_438172.1| WD repeat domain 5 [Homo sapiens] 266 2e-71 Alignment gi|NP_060058.1| WD repeat domain 5 [Homo sapiens] 266 2e-71 Alignment gi|NP_061942.2| WD repeat domain 5B [Homo sapiens] 232 5e-61 Alignment gi|NP_000421.1| platelet-activating factor acetylhydrolase, iso... 80 4e-15 Alignment gi|NP_849143.1| hypothetical protein LOC164781 [Homo sapiens] 78 1e-14 Alignment gi|NP_079510.1| WD repeat domain 61 [Homo sapiens] 77 3e-14 Alignment gi|NP_078808.3| sperm associated antigen 16 isoform 1 [Homo sap... 75 8e-14 Alignment gi|NP_056241.2| WD repeat domain 51A [Homo sapiens] 75 1e-13 Alignment gi|XP_934992.1| PREDICTED: similar to CG7704-PA isoform 1 [Homo... 75 1e-13 Alignment gi|XP_947007.1| PREDICTED: similar to CG7704-PA isoform 1 [Homo... 75 1e-13 >ref|NP_438172.1| WD repeat domain 5 [Homo sapiens] Length = 334 Score = 266 bits (680), Expect = 2e-71 Identities = 162/294 (55%), Positives = 178/294 (60%) Frame = +3 Query: 201 MATAENKXXXXXXXXXXXXXXXXXXSKXXXXXXXXXLKFTLAGHTKAVSSAKFTPNGEWL 380 MAT E K SK LKFTLAGHTKAVSS KF+PNGEWL Sbjct: 1 MATEEKKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWL 60 Query: 381 ASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDVSSGK 560 ASSSA KLI WGAY KFEKT+SG LGISDVA SSDSNLLVSASDDKTL IWDVSSGK Sbjct: 61 ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120 Query: 561 CLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSDPRLSRSL* 740 CL TL GHS+YVFCCNF+ QSNLIVSGSF ESV I DVKTGKCL TL AHSDP + Sbjct: 121 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180 Query: 741 PGRFPDCFKRYHGLCWIWDTPFGPCLKNLIDDYNSPLVLRKILSQRQVLFVPYP*KHP*T 920 Y GLC IWDT G CLK LIDD N P+ K S + + Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK-FSPNGKYILAATLDNTLK 239 Query: 921 SLNYPKENVLKKVTGPPKLKKNCEFSKFSFVPGRGK*MLFGLQKKLPFFYFLYT 1082 +Y K LK TG K +K C F+ FS V G GK ++ G + L + + L T Sbjct: 240 LWDYSKGKCLKTYTG-HKNEKYCIFANFS-VTG-GKWIVSGSEDNLVYIWNLQT 290 Score = 69.3 bits (168), Expect = 6e-12 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 4/146 (2%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTL-SGPSLGISDVACSSD 494 TL H+ VS+ F +G + SSS L W + KTL + +S V S + Sbjct: 166 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 225 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFC--CNFHLQSNL-IVSGSFHESVMI 665 +++A+ D TL +WD S GKCL T GH + +C NF + IVSGS V I Sbjct: 226 GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285 Query: 666 LDVKTGKCLTTLLAHSDPRLSRSL*P 743 +++T + + L H+D +S + P Sbjct: 286 WNLQTKEIVQKLQGHTDVVISTACHP 311 >ref|NP_060058.1| WD repeat domain 5 [Homo sapiens] Length = 334 Score = 266 bits (680), Expect = 2e-71 Identities = 162/294 (55%), Positives = 178/294 (60%) Frame = +3 Query: 201 MATAENKXXXXXXXXXXXXXXXXXXSKXXXXXXXXXLKFTLAGHTKAVSSAKFTPNGEWL 380 MAT E K SK LKFTLAGHTKAVSS KF+PNGEWL Sbjct: 1 MATEEKKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWL 60 Query: 381 ASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDVSSGK 560 ASSSA KLI WGAY KFEKT+SG LGISDVA SSDSNLLVSASDDKTL IWDVSSGK Sbjct: 61 ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120 Query: 561 CLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSDPRLSRSL* 740 CL TL GHS+YVFCCNF+ QSNLIVSGSF ESV I DVKTGKCL TL AHSDP + Sbjct: 121 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180 Query: 741 PGRFPDCFKRYHGLCWIWDTPFGPCLKNLIDDYNSPLVLRKILSQRQVLFVPYP*KHP*T 920 Y GLC IWDT G CLK LIDD N P+ K S + + Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK-FSPNGKYILAATLDNTLK 239 Query: 921 SLNYPKENVLKKVTGPPKLKKNCEFSKFSFVPGRGK*MLFGLQKKLPFFYFLYT 1082 +Y K LK TG K +K C F+ FS V G GK ++ G + L + + L T Sbjct: 240 LWDYSKGKCLKTYTG-HKNEKYCIFANFS-VTG-GKWIVSGSEDNLVYIWNLQT 290 Score = 69.3 bits (168), Expect = 6e-12 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 4/146 (2%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTL-SGPSLGISDVACSSD 494 TL H+ VS+ F +G + SSS L W + KTL + +S V S + Sbjct: 166 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 225 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFC--CNFHLQSNL-IVSGSFHESVMI 665 +++A+ D TL +WD S GKCL T GH + +C NF + IVSGS V I Sbjct: 226 GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285 Query: 666 LDVKTGKCLTTLLAHSDPRLSRSL*P 743 +++T + + L H+D +S + P Sbjct: 286 WNLQTKEIVQKLQGHTDVVISTACHP 311 >ref|NP_061942.2| WD repeat domain 5B [Homo sapiens] Length = 330 Score = 232 bits (591), Expect = 5e-61 Identities = 138/258 (53%), Positives = 164/258 (63%) Frame = +3 Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488 LK TL GHT+AVSS KF+PNGEWLASSSA +LI WGAY K+EKTL G +L ISDVA S Sbjct: 33 LKCTLVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWS 92 Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668 SDS+ LVSASDDKTL +WDV SGKCL TL GHS+YVFCCNF+ SNLI+SGSF E+V I Sbjct: 93 SDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIW 152 Query: 669 DVKTGKCLTTLLAHSDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLIDDYNSP 848 +VKTGKCL TL AHSDP + Y GLC IWD G CLK L+DD N P Sbjct: 153 EVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPP 212 Query: 849 LVLRKILSQRQVLFVPYP*KHP*TSLNYPKENVLKKVTGPPKLKKNCEFSKFSFVPGRGK 1028 + K S + + +Y + LK TG K +K C F+ FS V G GK Sbjct: 213 VSFVK-FSPNGKYILTATLDNTLKLWDYSRGRCLKTYTG-HKNEKYCIFANFS-VTG-GK 268 Query: 1029 *MLFGLQKKLPFFYFLYT 1082 ++ G + L + + L T Sbjct: 269 WIVSGSEDNLVYIWNLQT 286 Score = 68.2 bits (165), Expect = 1e-11 Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 4/146 (2%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTL-SGPSLGISDVACSSD 494 TL+ H+ VS+ F +G + S S L W A + KTL + +S V S + Sbjct: 162 TLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPN 221 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFC--CNFHLQSNL-IVSGSFHESVMI 665 +++A+ D TL +WD S G+CL T GH + +C NF + IVSGS V I Sbjct: 222 GKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 281 Query: 666 LDVKTGKCLTTLLAHSDPRLSRSL*P 743 +++T + + L H+D +S + P Sbjct: 282 WNLQTKEIVQKLQGHTDVVISAACHP 307 >ref|NP_000421.1| platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit (45kD) [Homo sapiens] Length = 410 Score = 79.7 bits (195), Expect = 4e-15 Identities = 41/135 (30%), Positives = 66/135 (48%) Frame = +3 Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491 K+ L+GH V+ F P + S+S I W FE+TL G + + D++ Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160 Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671 LL S S D T+ +WD +C+ T++GH H V + IVS S +++ + + Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220 Query: 672 VKTGKCLTTLLAHSD 716 V+TG C+ T H + Sbjct: 221 VQTGYCVKTFTGHRE 235 Score = 77.4 bits (189), Expect = 2e-14 Identities = 45/131 (34%), Positives = 66/131 (50%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 TL GHT +V F +G+ LAS SA I W + +T+ G +S VA + Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +VSAS DKT+ +W+V +G C+ T GH +V + LI S S ++V + V Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264 Query: 678 TGKCLTTLLAH 710 T +C L H Sbjct: 265 TKECKAELREH 275 Score = 77.0 bits (188), Expect = 3e-14 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 20/153 (13%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 T+ GH VSS PNG+ + S+S K I W KT +G + V + D Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSN----------------- 626 L+ S S+D+T+ +W V++ +C L H H V C ++ +S+ Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGK 306 Query: 627 ---LIVSGSFHESVMILDVKTGKCLTTLLAHSD 716 ++SGS +++ + DV TG CL TL+ H + Sbjct: 307 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339 Score = 66.6 bits (161), Expect = 4e-11 Identities = 33/103 (32%), Positives = 52/103 (50%) Frame = +3 Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548 G +L S S K I W TL G + V S ++S +DDKTL +WD Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +C+ TLN H H+V +FH + +V+GS ++V + + + Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 >ref|NP_849143.1| hypothetical protein LOC164781 [Homo sapiens] Length = 415 Score = 78.2 bits (191), Expect = 1e-14 Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 5/175 (2%) Frame = +3 Query: 318 TLAGHTKAVSSAKFT-PNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494 TL GH V + F P G+ +A+ S K W K T G + I ++ + Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQ 188 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674 S L+ + S D T +WD+ +G+ + TL GHS + +F+ + I++GSF +V++ D Sbjct: 189 STLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDA 248 Query: 675 KTGKCLTTLLAHSDPRLSRSL*PGRFPDCFKRYHG----LCWIWDTPFGPCLKNL 827 TG+ + L+ H S S DC G C +WD G C+ L Sbjct: 249 DTGRKVNILIGHCAEISSASF----NWDCSLILTGSMDKTCKLWDATNGKCVATL 299 Score = 75.9 bits (185), Expect = 6e-14 Identities = 48/171 (28%), Positives = 72/171 (42%) Frame = +3 Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494 +TL GH+ + S F +G+ + + S + W A + L G IS + + D Sbjct: 213 YTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWD 272 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674 +L+++ S DKT +WD ++GKC+ TL GH + F LI + S + I Sbjct: 273 CSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSA 332 Query: 675 KTGKCLTTLLAHSDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNL 827 T KC+ L H S P IWD G CL+ L Sbjct: 333 ATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVL 383 Score = 74.3 bits (181), Expect = 2e-13 Identities = 37/109 (33%), Positives = 59/109 (54%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 TL GH + + F G+ +A++SA + A RK L G IS ++ + Sbjct: 298 TLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQG 357 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGS 644 N L++ S DKT IWD +G+CL L GH+ +F C F+ + N++++GS Sbjct: 358 NHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGS 406 Score = 73.2 bits (178), Expect = 4e-13 Identities = 42/132 (31%), Positives = 65/132 (49%) Frame = +3 Query: 321 LAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSN 500 L GH +SSA F + + + S K W A + K TL+G I D Sbjct: 257 LIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGK 316 Query: 501 LLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKT 680 L+ +AS D T I+ ++ KC+ L GH + +F+ Q N +++GS ++ I D +T Sbjct: 317 LIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQT 376 Query: 681 GKCLTTLLAHSD 716 G+CL L H+D Sbjct: 377 GQCLQVLEGHTD 388 Score = 70.9 bits (172), Expect = 2e-12 Identities = 36/133 (27%), Positives = 64/133 (48%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 T GHT + F P +A+ S W + + TL G S I ++ ++ Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSG 231 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +++ S D T+ +WD +G+ + L GH + +F+ +LI++GS ++ + D Sbjct: 232 DRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDAT 291 Query: 678 TGKCLTTLLAHSD 716 GKC+ TL H D Sbjct: 292 NGKCVATLTGHDD 304 Score = 58.2 bits (139), Expect = 1e-08 Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 1/92 (1%) Frame = +3 Query: 441 KTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNF-HL 617 K L L +++VA + + ++ S D+T +WD +SG+ L TL GH + V+ F + Sbjct: 86 KVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNP 145 Query: 618 QSNLIVSGSFHESVMILDVKTGKCLTTLLAHS 713 + I +GSF ++ + V+TGKC T H+ Sbjct: 146 YGDKIATGSFDKTCKLWSVETGKCYHTFRGHT 177 >ref|NP_079510.1| WD repeat domain 61 [Homo sapiens] Length = 305 Score = 76.6 bits (187), Expect = 3e-14 Identities = 46/135 (34%), Positives = 70/135 (51%) Frame = +3 Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491 +++L K + S ++P+G++LAS + +IN + K TL G ++ I + S Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200 Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671 DS LLV+ASDD + I+DV TL+GH+ +V F VS S +SV + D Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260 Query: 672 VKTGKCLTTLLAHSD 716 V T C+ T H D Sbjct: 261 VGTRTCVHTFFDHQD 275 Score = 63.5 bits (153), Expect = 3e-10 Identities = 36/121 (29%), Positives = 58/121 (47%) Frame = +3 Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488 L TL GH + S F+P+ + L ++S I + H TLSG + + +VA Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241 Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668 D VS+S DK++ +WDV + C+ T H V+ ++ + IVS + + I Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301 Query: 669 D 671 D Sbjct: 302 D 302 Score = 61.6 bits (148), Expect = 1e-09 Identities = 43/159 (27%), Positives = 70/159 (44%) Frame = +3 Query: 357 FTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLN 536 F+P+ ++LA+ + +N +G K E +L I +A S D L S + D +N Sbjct: 114 FSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 173 Query: 537 IWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSD 716 I+D+++GK L TL GH+ + F S L+V+ S + I DV+ TL H+ Sbjct: 174 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 233 Query: 717 PRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLID 833 L+ + P +WD C+ D Sbjct: 234 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 272 Score = 55.5 bits (132), Expect = 8e-08 Identities = 40/145 (27%), Positives = 64/145 (44%) Frame = +3 Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488 L+++L GH V S + ASSS I W + K K++ + +A S Sbjct: 56 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFS 115 Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668 DS L + + +NI+ V SGK +L+ ++ + + SG+ + I Sbjct: 116 PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175 Query: 669 DVKTGKCLTTLLAHSDPRLSRSL*P 743 D+ TGK L TL H+ P S + P Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSP 200 >ref|NP_078808.3| sperm associated antigen 16 isoform 1 [Homo sapiens] Length = 631 Score = 75.5 bits (184), Expect = 8e-14 Identities = 44/128 (34%), Positives = 63/128 (49%) Frame = +3 Query: 327 GHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLL 506 GHT +S F P+G+ LA+SS + W T G S + S N + Sbjct: 392 GHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFV 451 Query: 507 VSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGK 686 S+S DKT IWDV+S +C TL GH+ V F SN +++ S +++ I D +TG Sbjct: 452 ASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGI 511 Query: 687 CLTTLLAH 710 C +L H Sbjct: 512 CEQSLYGH 519 Score = 71.2 bits (173), Expect = 1e-12 Identities = 47/172 (27%), Positives = 71/172 (41%) Frame = +3 Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509 H VS P+ + L S +L G T G + +SD + L Sbjct: 351 HELPVSCVSMQPHKDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKLA 410 Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKC 689 ++S D T+ +WD+ G C++T GHS V+ C +H N + S S ++ I DV + +C Sbjct: 411 TSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERC 470 Query: 690 LTTLLAHSDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLIDDYNS 845 TL H+D S P IWD G C ++L +S Sbjct: 471 RCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSLYGHMHS 522 Score = 63.5 bits (153), Expect = 3e-10 Identities = 36/107 (33%), Positives = 56/107 (52%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 T GH++AV S + G ++ASSS K W + TL G + ++ + S Sbjct: 431 TFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFS 490 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVS 638 N L+++S DKTL+IWD +G C +L GH H + F + ++I S Sbjct: 491 NTLLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHMIAS 537 >ref|NP_056241.2| WD repeat domain 51A [Homo sapiens] Length = 407 Score = 75.1 bits (183), Expect = 1e-13 Identities = 41/128 (32%), Positives = 63/128 (49%) Frame = +3 Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509 HT V S F +G+ ++S K + W + +KF +LS + S D L+V Sbjct: 102 HTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIV 161 Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKC 689 SASDDKT+ +WD SS +C+ + H +V +FH I + +V + DV+T + Sbjct: 162 SASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTYRL 221 Query: 690 LTTLLAHS 713 L HS Sbjct: 222 LQHYQLHS 229 Score = 73.2 bits (178), Expect = 4e-13 Identities = 40/132 (30%), Positives = 62/132 (46%) Frame = +3 Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494 + GH AV+ F+P+G LAS S K + W + + + V SD Sbjct: 55 YRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSD 114 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674 V+ASDDKT+ +W K L +L+ H ++V C F LIVS S ++V + D Sbjct: 115 GQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 174 Query: 675 KTGKCLTTLLAH 710 + +C+ + H Sbjct: 175 SSRECVHSYCEH 186 Score = 64.3 bits (155), Expect = 2e-10 Identities = 38/135 (28%), Positives = 63/135 (46%) Frame = +3 Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494 F+L+ H V AKF+P+G + S+S K + W R+ + ++ V Sbjct: 139 FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPS 198 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674 + +A D T+ +WDV + + L HS V +FH N +++ S ++ ILD+ Sbjct: 199 GTCIAAAGMDNTVKVWDVRTYRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDL 258 Query: 675 KTGKCLTTLLAHSDP 719 G+ L TL H P Sbjct: 259 MEGRLLYTLHGHQGP 273 Score = 50.1 bits (118), Expect = 3e-06 Identities = 29/112 (25%), Positives = 47/112 (41%) Frame = +3 Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509 H V+ F P+G +A++ + W + + S ++ ++ N L+ Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTYRLLQHYQLHSAAVNGLSFHPSGNYLI 245 Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMI 665 +AS D TL I D+ G+ L TL+GH F SG E VM+ Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297 >ref|XP_934992.1| PREDICTED: similar to CG7704-PA isoform 1 [Homo sapiens] Length = 315 Score = 74.7 bits (182), Expect = 1e-13 Identities = 42/129 (32%), Positives = 65/129 (50%) Frame = +3 Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509 H V+S+ F+P+G+ L + S + W + L G + + S D +L Sbjct: 20 HGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFA 79 Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKC 689 SAS D T+ +WDV+ KCL L GH V +F S + SG + + VM+ DV++G+ Sbjct: 80 SASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQM 139 Query: 690 LTTLLAHSD 716 L L+ H D Sbjct: 140 LRLLVGHRD 148 Score = 71.2 bits (173), Expect = 1e-12 Identities = 40/123 (32%), Positives = 60/123 (48%) Frame = +3 Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488 L + L GHT V +F+P+G AS+S + W K + L G + V+ S Sbjct: 55 LLWRLGGHTGPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFS 114 Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668 DS L S DK + +WDV SG+ L L GH + +F N + +GS+ +V I Sbjct: 115 PDSRQLASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIW 174 Query: 669 DVK 677 D++ Sbjct: 175 DLR 177 Score = 67.8 bits (164), Expect = 2e-11 Identities = 44/130 (33%), Positives = 61/130 (46%), Gaps = 3/130 (2%) Frame = +3 Query: 321 LAGHTKAVSSAKFTPNGEWLASSSAHKLINTWG---AYHRKFEKTLSGPSLGISDVACSS 491 L GH ++ S+ F+P LA+ S ++ W + L G S IS + C S Sbjct: 143 LVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQALEGHSANISCL-CYS 201 Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671 S LL S S DKT++IW ++ LI L GH +V F + S + V + D Sbjct: 202 ASGLLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWD 261 Query: 672 VKTGKCLTTL 701 TGKCL TL Sbjct: 262 CNTGKCLETL 271 >ref|XP_947007.1| PREDICTED: similar to CG7704-PA isoform 1 [Homo sapiens] Length = 315 Score = 74.7 bits (182), Expect = 1e-13 Identities = 42/129 (32%), Positives = 65/129 (50%) Frame = +3 Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509 H V+S+ F+P+G+ L + S + W + L G + + S D +L Sbjct: 20 HGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFA 79 Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKC 689 SAS D T+ +WDV+ KCL L GH V +F S + SG + + VM+ DV++G+ Sbjct: 80 SASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQM 139 Query: 690 LTTLLAHSD 716 L L+ H D Sbjct: 140 LRLLVGHRD 148 Score = 71.6 bits (174), Expect = 1e-12 Identities = 40/123 (32%), Positives = 60/123 (48%) Frame = +3 Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488 L + L GHT V +F+P+G AS+S + W K + L G + V+ S Sbjct: 55 LLWRLGGHTGPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFS 114 Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668 DS L S DK + +WDV SG+ L L GH + +F N + +GS+ +V I Sbjct: 115 PDSRQLASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVRIW 174 Query: 669 DVK 677 D++ Sbjct: 175 DLR 177 Score = 66.2 bits (160), Expect = 5e-11 Identities = 44/130 (33%), Positives = 60/130 (46%), Gaps = 3/130 (2%) Frame = +3 Query: 321 LAGHTKAVSSAKFTPNGEWLASSSAHKLINTWG---AYHRKFEKTLSGPSLGISDVACSS 491 L GH ++ S+ F+P LA+ S + W + L G S IS + C S Sbjct: 143 LVGHRDSIQSSDFSPTVNCLATGSWDSTVRIWDLRMVTPAVSHQALEGHSGNISCL-CYS 201 Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671 S LL S S DKT++IW ++ LI L GH +V F + S + V + D Sbjct: 202 ASGLLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWD 261 Query: 672 VKTGKCLTTL 701 TGKCL TL Sbjct: 262 CNTGKCLETL 271 Database: RefSeqHP Posted date: Aug 2, 2006 12:57 AM Number of letters in database: 17,774,539 Number of sequences in database: 39,411 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,530,800 Number of Sequences: 39411 Number of extensions: 1031113 Number of successful extensions: 5356 Number of sequences better than 1.0e-05: 10 Number of HSP's better than 0.0 without gapping: 3797 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5091 length of database: 17,774,539 effective HSP length: 103 effective length of database: 13,715,206 effective search space used: 3675675208 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
Search to RefSeqMP
BLASTX 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 20060611S-020080 (1115 letters) Database: RefSeqMP 45,328 sequences; 21,768,885 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Alignment gi|NP_543124.1| WD repeat domain 5 [Mus musculus] 266 3e-71 Alignment gi|NP_081389.1| WD repeat domain 5B [Mus musculus] 216 5e-56 Alignment gi|NP_038653.1| platelet-activating factor acetylhydrolase, iso... 80 5e-15 Alignment gi|NP_080004.1| sperm associated antigen 16 isoform 2 [Mus musc... 79 1e-14 Alignment gi|NP_083436.2| sperm associated antigen 16 isoform 1 [Mus musc... 79 1e-14 Alignment gi|NP_082001.1| hypothetical protein LOC71227 [Mus musculus] 78 1e-14 Alignment gi|XP_987745.1| PREDICTED: similar to platelet-activating facto... 77 3e-14 Alignment gi|NP_001020547.1| WD repeat domain 61 isoform b [Mus musculus] 77 3e-14 Alignment gi|NP_001020546.1| WD repeat domain 61 isoform a [Mus musculus] 77 3e-14 Alignment gi|NP_075680.1| WD repeat domain 61 isoform a [Mus musculus] 77 3e-14 >ref|NP_543124.1| WD repeat domain 5 [Mus musculus] Length = 334 Score = 266 bits (680), Expect = 3e-71 Identities = 162/294 (55%), Positives = 178/294 (60%) Frame = +3 Query: 201 MATAENKXXXXXXXXXXXXXXXXXXSKXXXXXXXXXLKFTLAGHTKAVSSAKFTPNGEWL 380 MAT E K SK LKFTLAGHTKAVSS KF+PNGEWL Sbjct: 1 MATEEKKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWL 60 Query: 381 ASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDVSSGK 560 ASSSA KLI WGAY KFEKT+SG LGISDVA SSDSNLLVSASDDKTL IWDVSSGK Sbjct: 61 ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120 Query: 561 CLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSDPRLSRSL* 740 CL TL GHS+YVFCCNF+ QSNLIVSGSF ESV I DVKTGKCL TL AHSDP + Sbjct: 121 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180 Query: 741 PGRFPDCFKRYHGLCWIWDTPFGPCLKNLIDDYNSPLVLRKILSQRQVLFVPYP*KHP*T 920 Y GLC IWDT G CLK LIDD N P+ K S + + Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK-FSPNGKYILAATLDNTLK 239 Query: 921 SLNYPKENVLKKVTGPPKLKKNCEFSKFSFVPGRGK*MLFGLQKKLPFFYFLYT 1082 +Y K LK TG K +K C F+ FS V G GK ++ G + L + + L T Sbjct: 240 LWDYSKGKCLKTYTG-HKNEKYCIFANFS-VTG-GKWIVSGSEDNLVYIWNLQT 290 Score = 69.3 bits (168), Expect = 7e-12 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 4/146 (2%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTL-SGPSLGISDVACSSD 494 TL H+ VS+ F +G + SSS L W + KTL + +S V S + Sbjct: 166 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 225 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFC--CNFHLQSNL-IVSGSFHESVMI 665 +++A+ D TL +WD S GKCL T GH + +C NF + IVSGS V I Sbjct: 226 GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285 Query: 666 LDVKTGKCLTTLLAHSDPRLSRSL*P 743 +++T + + L H+D +S + P Sbjct: 286 WNLQTKEIVQKLQGHTDVVISTACHP 311 >ref|NP_081389.1| WD repeat domain 5B [Mus musculus] Length = 328 Score = 216 bits (549), Expect = 5e-56 Identities = 130/258 (50%), Positives = 160/258 (62%) Frame = +3 Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488 L+ TLAGH+ A+SS KF+PNGEWLASS+A LI WGAY +KTL G SL ISDVA S Sbjct: 31 LRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWS 90 Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668 SDS+ LVSASDDKTL +WD+ SGKCL TL GHS +VFCC+F+ SNLIVSGSF ESV I Sbjct: 91 SDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIW 150 Query: 669 DVKTGKCLTTLLAHSDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLIDDYNSP 848 +VKTGKCL TL AHSDP + + Y GLC IWD G CL+ L D+ N P Sbjct: 151 EVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPP 210 Query: 849 LVLRKILSQRQVLFVPYP*KHP*TSLNYPKENVLKKVTGPPKLKKNCEFSKFSFVPGRGK 1028 + K S + + +Y + LK TG K +K C F+ FS V GR K Sbjct: 211 VSFVK-FSPNGKYILTATLDNTLKLWDYSRGRCLKTYTG-HKNEKYCLFASFS-VTGR-K 266 Query: 1029 *MLFGLQKKLPFFYFLYT 1082 ++ G + + + + L T Sbjct: 267 WVVSGSEDNMVYIWNLQT 284 Score = 67.4 bits (163), Expect = 3e-11 Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 4/146 (2%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGP-SLGISDVACSSD 494 TL+ H+ +S+ F NG + S S L W A + +TL+ + +S V S + Sbjct: 160 TLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPN 219 Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFC--CNFHLQSNL-IVSGSFHESVMI 665 +++A+ D TL +WD S G+CL T GH + +C +F + +VSGS V I Sbjct: 220 GKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYI 279 Query: 666 LDVKTGKCLTTLLAHSDPRLSRSL*P 743 +++T + + L H+D +S + P Sbjct: 280 WNLQTKEIVQRLQGHTDVVISAACHP 305 >ref|NP_038653.1| platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit [Mus musculus] Length = 410 Score = 79.7 bits (195), Expect = 5e-15 Identities = 41/135 (30%), Positives = 66/135 (48%) Frame = +3 Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491 K+ L+GH V+ F P + S+S I W FE+TL G + + D++ Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160 Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671 LL S S D T+ +WD +C+ T++GH H V + IVS S +++ + + Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220 Query: 672 VKTGKCLTTLLAHSD 716 V+TG C+ T H + Sbjct: 221 VQTGYCVKTFTGHRE 235 Score = 77.4 bits (189), Expect = 3e-14 Identities = 45/131 (34%), Positives = 66/131 (50%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 TL GHT +V F +G+ LAS SA I W + +T+ G +S VA + Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +VSAS DKT+ +W+V +G C+ T GH +V + LI S S ++V + V Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264 Query: 678 TGKCLTTLLAH 710 T +C L H Sbjct: 265 TKECKAELREH 275 Score = 77.0 bits (188), Expect = 3e-14 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 20/153 (13%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 T+ GH VSS PNG+ + S+S K I W KT +G + V + D Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSN----------------- 626 L+ S S+D+T+ +W V++ +C L H H V C ++ +S+ Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGK 306 Query: 627 ---LIVSGSFHESVMILDVKTGKCLTTLLAHSD 716 ++SGS +++ + DV TG CL TL+ H + Sbjct: 307 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339 Score = 66.6 bits (161), Expect = 4e-11 Identities = 33/103 (32%), Positives = 52/103 (50%) Frame = +3 Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548 G +L S S K I W TL G + V S ++S +DDKTL +WD Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +C+ TLN H H+V +FH + +V+GS ++V + + + Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 >ref|NP_080004.1| sperm associated antigen 16 isoform 2 [Mus musculus] Length = 310 Score = 78.6 bits (192), Expect = 1e-14 Identities = 45/131 (34%), Positives = 67/131 (51%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 T +GHT +S F P+G LA+SS I W + TL G + + S Sbjct: 68 TGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCG 127 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + + SAS D T IWDV+S +C TL GH+ V F SN++++ S +++ + D + Sbjct: 128 DFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDAR 187 Query: 678 TGKCLTTLLAH 710 TGKC +L H Sbjct: 188 TGKCEQSLYGH 198 Score = 71.2 bits (173), Expect = 2e-12 Identities = 47/172 (27%), Positives = 74/172 (43%) Frame = +3 Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509 H VS P ++L S S +L G T SG + +S + L Sbjct: 30 HELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLA 89 Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKC 689 ++S D T+ +WD++ G+C +TL GH+H V+ C +H + + S S + I DV + +C Sbjct: 90 TSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERC 149 Query: 690 LTTLLAHSDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLIDDYNS 845 TL H+D S P +WD G C ++L +S Sbjct: 150 RYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHS 201 Score = 67.4 bits (163), Expect = 3e-11 Identities = 37/107 (34%), Positives = 57/107 (53%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 TL GH AV S + G+++AS+S W + TL G + ++ + S Sbjct: 110 TLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFS 169 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVS 638 N+L++AS DKTL++WD +GKC +L GH H V F + ++I S Sbjct: 170 NILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHIIAS 216 Score = 53.1 bits (126), Expect = 5e-07 Identities = 30/125 (24%), Positives = 61/125 (48%) Frame = +3 Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491 ++TL GHT +V+S +F P L ++SA K ++ W A K E++L G ++D + Sbjct: 150 RYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTP 209 Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671 +++ S +WD +++++ NF ++ S + + +LD Sbjct: 210 RGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQSGRVLAQASANGIIHLLD 269 Query: 672 VKTGK 686 +K+G+ Sbjct: 270 LKSGQ 274 >ref|NP_083436.2| sperm associated antigen 16 isoform 1 [Mus musculus] Length = 639 Score = 78.6 bits (192), Expect = 1e-14 Identities = 45/131 (34%), Positives = 67/131 (51%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 T +GHT +S F P+G LA+SS I W + TL G + + S Sbjct: 397 TGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCG 456 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + + SAS D T IWDV+S +C TL GH+ V F SN++++ S +++ + D + Sbjct: 457 DFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDAR 516 Query: 678 TGKCLTTLLAH 710 TGKC +L H Sbjct: 517 TGKCEQSLYGH 527 Score = 71.2 bits (173), Expect = 2e-12 Identities = 47/172 (27%), Positives = 74/172 (43%) Frame = +3 Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509 H VS P ++L S S +L G T SG + +S + L Sbjct: 359 HELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLA 418 Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKC 689 ++S D T+ +WD++ G+C +TL GH+H V+ C +H + + S S + I DV + +C Sbjct: 419 TSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERC 478 Query: 690 LTTLLAHSDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLIDDYNS 845 TL H+D S P +WD G C ++L +S Sbjct: 479 RYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHS 530 Score = 67.4 bits (163), Expect = 3e-11 Identities = 37/107 (34%), Positives = 57/107 (53%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 TL GH AV S + G+++AS+S W + TL G + ++ + S Sbjct: 439 TLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFS 498 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVS 638 N+L++AS DKTL++WD +GKC +L GH H V F + ++I S Sbjct: 499 NILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHIIAS 545 Score = 53.1 bits (126), Expect = 5e-07 Identities = 30/125 (24%), Positives = 61/125 (48%) Frame = +3 Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491 ++TL GHT +V+S +F P L ++SA K ++ W A K E++L G ++D + Sbjct: 479 RYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTP 538 Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671 +++ S +WD +++++ NF ++ S + + +LD Sbjct: 539 RGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQSGRVLAQASANGIIHLLD 598 Query: 672 VKTGK 686 +K+G+ Sbjct: 599 LKSGQ 603 >ref|NP_082001.1| hypothetical protein LOC71227 [Mus musculus] Length = 310 Score = 78.2 bits (191), Expect = 1e-14 Identities = 40/116 (34%), Positives = 62/116 (53%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 TL GH + + F G+ +A++SA + A RK L G IS ++ + Sbjct: 193 TLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCVTKLEGHEGEISKISFNPQG 252 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMI 665 N L++ S DKT IWDV +G+CL L GH+ +F C F+ + N++++GS S I Sbjct: 253 NRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRI 308 Score = 76.6 bits (187), Expect = 4e-14 Identities = 43/133 (32%), Positives = 68/133 (51%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 TL GH +SSA F + + + S K W A K+ TL+G I D Sbjct: 151 TLIGHCAEISSALFNWDCSLILTGSMDKTCMLWDATSGKYVATLTGHDDEILDSCFDYTG 210 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 L+ +AS D T +++ ++ KC+ L GH + +F+ Q N +++GS ++ I DV+ Sbjct: 211 KLIATASADGTARVYNATTRKCVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQ 270 Query: 678 TGKCLTTLLAHSD 716 TG+CL L H+D Sbjct: 271 TGQCLQVLEGHTD 283 Score = 52.8 bits (125), Expect = 7e-07 Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 22/114 (19%) Frame = +3 Query: 441 KTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVF------- 599 K L L +++VA + + ++ S D+T +WD +SG+ L TL GH + V+ Sbjct: 86 KVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHKNVVYAIAFNNP 145 Query: 600 ----------CCN-----FHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSD 716 C F+ +LI++GS ++ M+ D +GK + TL H D Sbjct: 146 YGKVHTLIGHCAEISSALFNWDCSLILTGSMDKTCMLWDATSGKYVATLTGHDD 199 >ref|XP_987745.1| PREDICTED: similar to platelet-activating factor acetylhydrolase beta subunit [Mus musculus] Length = 312 Score = 77.4 bits (189), Expect = 3e-14 Identities = 45/131 (34%), Positives = 66/131 (50%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 TL GHT +V F +G+ LAS SA I W + +T+ G +S VA + Sbjct: 47 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 106 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +VSAS DKT+ +W+V +G C+ T GH +V + LI S S ++V + V Sbjct: 107 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 166 Query: 678 TGKCLTTLLAH 710 T +C L H Sbjct: 167 TKECKAELREH 177 Score = 77.0 bits (188), Expect = 3e-14 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 20/153 (13%) Frame = +3 Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497 T+ GH VSS PNG+ + S+S K I W KT +G + V + D Sbjct: 89 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 148 Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSN----------------- 626 L+ S S+D+T+ +W V++ +C L H H V C ++ +S+ Sbjct: 149 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGK 208 Query: 627 ---LIVSGSFHESVMILDVKTGKCLTTLLAHSD 716 ++SGS +++ + DV TG CL TL+ H + Sbjct: 209 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 241 Score = 66.6 bits (161), Expect = 4e-11 Identities = 33/103 (32%), Positives = 52/103 (50%) Frame = +3 Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548 G +L S S K I W TL G + V S ++S +DDKTL +WD Sbjct: 210 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 269 Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677 + +C+ TLN H H+V +FH + +V+GS ++V + + + Sbjct: 270 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 312 Score = 65.5 bits (158), Expect = 1e-10 Identities = 32/105 (30%), Positives = 53/105 (50%) Frame = +3 Query: 402 LINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDVSSGKCLITLNG 581 L + W FE+TL G + + D++ LL S S D T+ +WD +C+ T++G Sbjct: 33 LHSVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG 92 Query: 582 HSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSD 716 H H V + IVS S +++ + +V+TG C+ T H + Sbjct: 93 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 137 >ref|NP_001020547.1| WD repeat domain 61 isoform b [Mus musculus] Length = 207 Score = 77.0 bits (188), Expect = 3e-14 Identities = 46/135 (34%), Positives = 70/135 (51%) Frame = +3 Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491 +++L K + S ++P+G++LAS + +IN + K TL G ++ I + S Sbjct: 43 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 102 Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671 DS LLV+ASDD + I+DV TL+GH+ +V F VS S +SV + D Sbjct: 103 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 162 Query: 672 VKTGKCLTTLLAHSD 716 V T C+ T H D Sbjct: 163 VGTRTCIHTFFDHQD 177 Score = 63.5 bits (153), Expect = 4e-10 Identities = 35/121 (28%), Positives = 58/121 (47%) Frame = +3 Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488 L TL GH + S F+P+ + L ++S I + H TLSG + + +VA Sbjct: 84 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 143 Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668 D VS+S DK++ +WDV + C+ T H V+ ++ + IVS + + + Sbjct: 144 PDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 203 Query: 669 D 671 D Sbjct: 204 D 204 Score = 62.4 bits (150), Expect = 8e-10 Identities = 43/159 (27%), Positives = 70/159 (44%) Frame = +3 Query: 357 FTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLN 536 F+P+ ++LA+ + +N +G K E +L I +A S D L S + D +N Sbjct: 16 FSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 75 Query: 537 IWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSD 716 I+D+++GK L TL GH+ + F S L+V+ S + I DV+ TL H+ Sbjct: 76 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 135 Query: 717 PRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLID 833 L+ + P +WD C+ D Sbjct: 136 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFD 174 >ref|NP_001020546.1| WD repeat domain 61 isoform a [Mus musculus] Length = 305 Score = 77.0 bits (188), Expect = 3e-14 Identities = 46/135 (34%), Positives = 70/135 (51%) Frame = +3 Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491 +++L K + S ++P+G++LAS + +IN + K TL G ++ I + S Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200 Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671 DS LLV+ASDD + I+DV TL+GH+ +V F VS S +SV + D Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260 Query: 672 VKTGKCLTTLLAHSD 716 V T C+ T H D Sbjct: 261 VGTRTCIHTFFDHQD 275 Score = 63.5 bits (153), Expect = 4e-10 Identities = 35/121 (28%), Positives = 58/121 (47%) Frame = +3 Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488 L TL GH + S F+P+ + L ++S I + H TLSG + + +VA Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241 Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668 D VS+S DK++ +WDV + C+ T H V+ ++ + IVS + + + Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301 Query: 669 D 671 D Sbjct: 302 D 302 Score = 62.4 bits (150), Expect = 8e-10 Identities = 43/159 (27%), Positives = 70/159 (44%) Frame = +3 Query: 357 FTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLN 536 F+P+ ++LA+ + +N +G K E +L I +A S D L S + D +N Sbjct: 114 FSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 173 Query: 537 IWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSD 716 I+D+++GK L TL GH+ + F S L+V+ S + I DV+ TL H+ Sbjct: 174 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 233 Query: 717 PRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLID 833 L+ + P +WD C+ D Sbjct: 234 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFD 272 Score = 55.8 bits (133), Expect = 8e-08 Identities = 40/145 (27%), Positives = 64/145 (44%) Frame = +3 Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488 L+++L GH V S + ASSS I W + K K++ + +A S Sbjct: 56 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFS 115 Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668 DS L + + +NI+ V SGK +L+ ++ + + SG+ + I Sbjct: 116 PDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175 Query: 669 DVKTGKCLTTLLAHSDPRLSRSL*P 743 D+ TGK L TL H+ P S + P Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSP 200 >ref|NP_075680.1| WD repeat domain 61 isoform a [Mus musculus] Length = 305 Score = 77.0 bits (188), Expect = 3e-14 Identities = 46/135 (34%), Positives = 70/135 (51%) Frame = +3 Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491 +++L K + S ++P+G++LAS + +IN + K TL G ++ I + S Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200 Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671 DS LLV+ASDD + I+DV TL+GH+ +V F VS S +SV + D Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260 Query: 672 VKTGKCLTTLLAHSD 716 V T C+ T H D Sbjct: 261 VGTRTCIHTFFDHQD 275 Score = 63.5 bits (153), Expect = 4e-10 Identities = 35/121 (28%), Positives = 58/121 (47%) Frame = +3 Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488 L TL GH + S F+P+ + L ++S I + H TLSG + + +VA Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241 Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668 D VS+S DK++ +WDV + C+ T H V+ ++ + IVS + + + Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301 Query: 669 D 671 D Sbjct: 302 D 302 Score = 62.4 bits (150), Expect = 8e-10 Identities = 43/159 (27%), Positives = 70/159 (44%) Frame = +3 Query: 357 FTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLN 536 F+P+ ++LA+ + +N +G K E +L I +A S D L S + D +N Sbjct: 114 FSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 173 Query: 537 IWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSD 716 I+D+++GK L TL GH+ + F S L+V+ S + I DV+ TL H+ Sbjct: 174 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 233 Query: 717 PRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLID 833 L+ + P +WD C+ D Sbjct: 234 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFD 272 Score = 55.8 bits (133), Expect = 8e-08 Identities = 40/145 (27%), Positives = 64/145 (44%) Frame = +3 Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488 L+++L GH V S + ASSS I W + K K++ + +A S Sbjct: 56 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFS 115 Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668 DS L + + +NI+ V SGK +L+ ++ + + SG+ + I Sbjct: 116 PDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175 Query: 669 DVKTGKCLTTLLAHSDPRLSRSL*P 743 D+ TGK L TL H+ P S + P Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSP 200 Database: RefSeqMP Posted date: Aug 2, 2006 12:58 AM Number of letters in database: 21,768,885 Number of sequences in database: 45,328 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,695,901 Number of Sequences: 45328 Number of extensions: 1173012 Number of successful extensions: 5440 Number of sequences better than 1.0e-05: 10 Number of HSP's better than 0.0 without gapping: 4015 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5235 length of database: 21,768,885 effective HSP length: 105 effective length of database: 17,009,445 effective search space used: 4524512370 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)