Animal-Genome cDNA 20060611S-020080


Search to RefSeqBP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-020080
         (1115 letters)

Database: RefSeqBP 
           33,508 sequences; 16,112,626 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_871162.1| PREDICTED: similar to WD repeat domain 5, parti...   138   7e-33
Alignment   gi|NP_777088.1| platelet-activating factor acetylhydrolase, iso...    80   4e-15
Alignment   gi|XP_608583.2| PREDICTED: similar to CG7568-PA [Bos taurus]          79   8e-15
Alignment   gi|XP_603152.1| PREDICTED: similar to TAF5-like RNA polymerase ...    78   1e-14
Alignment   gi|XP_582098.2| PREDICTED: similar to TAF5-like RNA polymerase ...    77   2e-14
Alignment   gi|NP_001033186.1| WD repeat domain 61 [Bos taurus]                   77   3e-14
Alignment   gi|XP_587553.2| PREDICTED: similar to TAF5-like RNA polymerase ...    75   7e-14
Alignment   gi|NP_001033649.1| WD repeat domain 51A [Bos taurus]                  75   9e-14
Alignment   gi|XP_603483.2| PREDICTED: similar to WD repeat domain 51B [Bos...    74   2e-13
Alignment   gi|XP_883815.1| PREDICTED: similar to F-box protein FBW7 isofor...    74   2e-13

>ref|XP_871162.1| PREDICTED: similar to WD repeat domain 5, partial [Bos taurus]
          Length = 440

 Score =  138 bits (348), Expect = 7e-33
 Identities = 70/82 (85%), Positives = 72/82 (87%)
 Frame = +3

Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488
           LKFTLAGHTKAVSS KF+PNGEWLASSSA KLI  WGAY  KFEKT+SG  LGISDVA S
Sbjct: 304 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 363

Query: 489 SDSNLLVSASDDKTLNIWDVSS 554
           SDSNLLVSASDDKTL IWDVSS
Sbjct: 364 SDSNLLVSASDDKTLKIWDVSS 385


>ref|NP_777088.1| platelet-activating factor acetylhydrolase, isoform Ib, alpha
           subunit (45kD) [Bos taurus]
          Length = 410

 Score = 79.7 bits (195), Expect = 4e-15
 Identities = 41/135 (30%), Positives = 66/135 (48%)
 Frame = +3

Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491
           K+ L+GH   V+   F P    + S+S    I  W      FE+TL G +  + D++   
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDH 160

Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671
              LL S S D T+ +WD    +C+ T++GH H V         + IVS S  +++ + +
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220

Query: 672 VKTGKCLTTLLAHSD 716
           V+TG C+ T   H +
Sbjct: 221 VQTGYCVKTFTGHRE 235



 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 45/131 (34%), Positives = 66/131 (50%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           TL GHT +V    F  +G+ LAS SA   I  W     +  +T+ G    +S VA   + 
Sbjct: 145 TLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
           + +VSAS DKT+ +W+V +G C+ T  GH  +V     +    LI S S  ++V +  V 
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264

Query: 678 TGKCLTTLLAH 710
           T +C   L  H
Sbjct: 265 TKECKAELREH 275



 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           T+ GH   VSS    PNG+ + S+S  K I  W        KT +G    +  V  + D 
Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSN----------------- 626
            L+ S S+D+T+ +W V++ +C   L  H H V C ++  +S+                 
Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGK 306

Query: 627 ---LIVSGSFHESVMILDVKTGKCLTTLLAHSD 716
               ++SGS  +++ + DV TG CL TL+ H +
Sbjct: 307 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339



 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 33/103 (32%), Positives = 52/103 (50%)
 Frame = +3

Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548
           G +L S S  K I  W         TL G    +  V   S    ++S +DDKTL +WD 
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367

Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
            + +C+ TLN H H+V   +FH  +  +V+GS  ++V + + +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410


>ref|XP_608583.2| PREDICTED: similar to CG7568-PA [Bos taurus]
          Length = 441

 Score = 78.6 bits (192), Expect = 8e-15
 Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 5/175 (2%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFT-PNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494
           TL GH   V +  F  P G+ +A+ S  K    W     K   T  G +  I  ++ +  
Sbjct: 155 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQ 214

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674
           S L+ + S D T  +WD+ SG+ + TL GHS  +   +F+   N I++GSF  +V + + 
Sbjct: 215 STLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEA 274

Query: 675 KTGKCLTTLLAHSDPRLSRSL*PGRFPDCFKRYHG----LCWIWDTPFGPCLKNL 827
            TG+ + TL+ H    +S ++      DC     G     C +WD   G C+  L
Sbjct: 275 DTGRKVYTLIGHC-AEISSAVFNW---DCSLILTGSMDKTCKLWDAVNGKCVATL 325



 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 50/171 (29%), Positives = 71/171 (41%)
 Frame = +3

Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494
           FTL GH+  + S  F  +G  + + S    +  W A   +   TL G    IS    + D
Sbjct: 239 FTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWD 298

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674
            +L+++ S DKT  +WD  +GKC+ TL GH   +    F     LI + S   +  I   
Sbjct: 299 CSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSA 358

Query: 675 KTGKCLTTLLAHSDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNL 827
            T +C+T L  H       S  P               IWD   G CL+ L
Sbjct: 359 ATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVL 409



 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 42/134 (31%), Positives = 67/134 (50%)
 Frame = +3

Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494
           +TL GH   +SSA F  +   + + S  K    W A + K   TL+G    I D      
Sbjct: 281 YTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYT 340

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674
             L+ +AS D T  I+  ++ +C+  L GH   +   +F+ Q N +++GS  ++  I D 
Sbjct: 341 GKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDA 400

Query: 675 KTGKCLTTLLAHSD 716
           +TG+CL  L  H+D
Sbjct: 401 QTGQCLQVLEGHTD 414



 Score = 73.2 bits (178), Expect = 4e-13
 Identities = 37/133 (27%), Positives = 64/133 (48%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           T  GHT  +    F P    +A+ S       W     +   TL+G S  I  ++ ++  
Sbjct: 198 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSG 257

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
           N +++ S D T+ +W+  +G+ + TL GH   +    F+   +LI++GS  ++  + D  
Sbjct: 258 NRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAV 317

Query: 678 TGKCLTTLLAHSD 716
            GKC+ TL  H D
Sbjct: 318 NGKCVATLTGHDD 330



 Score = 72.0 bits (175), Expect = 8e-13
 Identities = 36/109 (33%), Positives = 59/109 (54%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           TL GH   +  + F   G+ +A++SA      + A  R+    L G    IS ++ +   
Sbjct: 324 TLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQG 383

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGS 644
           N L++ S DKT  IWD  +G+CL  L GH+  +F C F+ + ++I++GS
Sbjct: 384 NRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGS 432



 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
 Frame = +3

Query: 441 KTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNF-HL 617
           K L    L +++VA +   +  ++ S D+T  +WD +SG+ L TL GH + V+   F + 
Sbjct: 112 KVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNP 171

Query: 618 QSNLIVSGSFHESVMILDVKTGKCLTTLLAHS 713
             + I +GSF ++  +  V+TGKC  T   H+
Sbjct: 172 YGDKIATGSFDKTCKLWSVETGKCYHTFRGHT 203


>ref|XP_603152.1| PREDICTED: similar to TAF5-like RNA polymerase II
           p300/CBP-associated factor-associated factor 65 kDa
           subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta)
           [Bos taurus]
          Length = 600

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 41/119 (34%), Positives = 61/119 (51%)
 Frame = +3

Query: 324 AGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNL 503
           AGH   V   KF PN  +LA+ S  K +  W A      +  +G    +  +A S +   
Sbjct: 434 AGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQY 493

Query: 504 LVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKT 680
           LVSA +D+ L +WD++SG     L+GH+  +    F L S++I S S   SV I D+K+
Sbjct: 494 LVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKS 552



 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 44/169 (26%), Positives = 60/169 (35%)
 Frame = +3

Query: 321 LAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSN 500
           L GH   V S +F P+   L S S    I  W            G +  + D+  S  S 
Sbjct: 349 LLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSL 408

Query: 501 LLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKT 680
              SAS D T  +W       L    GH   V C  FH  SN + +GS  ++V +   + 
Sbjct: 409 FFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 468

Query: 681 GKCLTTLLAHSDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNL 827
           G  +     H  P    +  P            L  +WD   G   K+L
Sbjct: 469 GNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDL 517



 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 32/130 (24%), Positives = 51/130 (39%)
 Frame = +3

Query: 327 GHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLL 506
           GH   V     +P+  + AS+S       W        +  +G   G+  V    +SN L
Sbjct: 393 GHAYPVWDLDISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYL 452

Query: 507 VSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGK 686
            + S DKT+ +W    G  +    GH   V C  F      +VS    + + + D+ +G 
Sbjct: 453 ATGSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGT 512

Query: 687 CLTTLLAHSD 716
               L  H+D
Sbjct: 513 LYKDLHGHTD 522


>ref|XP_582098.2| PREDICTED: similar to TAF5-like RNA polymerase II
           p300/CBP-associated factor-associated factor 65 kDa
           subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta)
           [Bos taurus]
          Length = 577

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 40/124 (32%), Positives = 60/124 (48%)
 Frame = +3

Query: 324 AGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNL 503
           AGH   V   KF PN  +LA+ S  K +  W        +  +G    +  +A S +S  
Sbjct: 411 AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNSKY 470

Query: 504 LVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTG 683
           L SA +D+ L +WD++SG     L GH+  +    F   S+LI S S   SV + D+++ 
Sbjct: 471 LASAGEDQRLKLWDLASGTLYKELRGHTDSITSLTFSSDSSLIASASMDNSVRVWDIRST 530

Query: 684 KCLT 695
            C T
Sbjct: 531 HCST 534



 Score = 58.5 bits (140), Expect = 9e-09
 Identities = 30/87 (34%), Positives = 46/87 (52%)
 Frame = +3

Query: 327 GHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLL 506
           GH   V S  F+PN ++LAS+   + +  W        K L G +  I+ +  SSDS+L+
Sbjct: 454 GHRGPVLSLAFSPNSKYLASAGEDQRLKLWDLASGTLYKELRGHTDSITSLTFSSDSSLI 513

Query: 507 VSASDDKTLNIWDVSSGKCLITLNGHS 587
            SAS D ++ +WD+ S  C    +G S
Sbjct: 514 ASASMDNSVRVWDIRSTHCSTPADGSS 540



 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 38/141 (26%), Positives = 53/141 (37%)
 Frame = +3

Query: 321 LAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSN 500
           L GH   V S +F  +   L S S    I  W            G +  + D+  S  S 
Sbjct: 326 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSL 385

Query: 501 LLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKT 680
              S S D+T  +W       L    GH   V C  FH  SN + +GS  ++V +   + 
Sbjct: 386 YFASGSHDRTARLWSFDRTYPLRIFAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQ 445

Query: 681 GKCLTTLLAHSDPRLSRSL*P 743
           G  +     H  P LS +  P
Sbjct: 446 GNSVRLFTGHRGPVLSLAFSP 466



 Score = 48.5 bits (114), Expect = 9e-06
 Identities = 30/130 (23%), Positives = 49/130 (37%)
 Frame = +3

Query: 327 GHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLL 506
           GH   V     +P+  + AS S  +    W        +  +G    +  V    +SN L
Sbjct: 370 GHAYPVWDLDISPHSLYFASGSHDRTARLWSFDRTYPLRIFAGHLADVDCVKFHPNSNYL 429

Query: 507 VSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGK 686
            + S DKT+ +W    G  +    GH   V    F   S  + S    + + + D+ +G 
Sbjct: 430 ATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNSKYLASAGEDQRLKLWDLASGT 489

Query: 687 CLTTLLAHSD 716
               L  H+D
Sbjct: 490 LYKELRGHTD 499


>ref|NP_001033186.1| WD repeat domain 61 [Bos taurus]
          Length = 305

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 46/135 (34%), Positives = 70/135 (51%)
 Frame = +3

Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491
           +++L    K + S  ++P+G++LAS +   +IN +     K   TL G ++ I  +  S 
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200

Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671
           DS LLV+ASDD  + I+DV       TL+GH+ +V    F       VS S  +SV + D
Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260

Query: 672 VKTGKCLTTLLAHSD 716
           V T  C+ T   H D
Sbjct: 261 VGTRTCVHTFFDHQD 275



 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 36/121 (29%), Positives = 58/121 (47%)
 Frame = +3

Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488
           L  TL GH   + S  F+P+ + L ++S    I  +   H     TLSG +  + +VA  
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241

Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668
            D    VS+S DK++ +WDV +  C+ T   H   V+   ++   + IVS    + + I 
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301

Query: 669 D 671
           D
Sbjct: 302 D 302



 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 43/159 (27%), Positives = 70/159 (44%)
 Frame = +3

Query: 357 FTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLN 536
           F+P+ ++LA+ +    +N +G    K E +L      I  +A S D   L S + D  +N
Sbjct: 114 FSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 173

Query: 537 IWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSD 716
           I+D+++GK L TL GH+  +    F   S L+V+ S    + I DV+      TL  H+ 
Sbjct: 174 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 233

Query: 717 PRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLID 833
             L+ +  P               +WD     C+    D
Sbjct: 234 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 272



 Score = 55.5 bits (132), Expect = 8e-08
 Identities = 40/145 (27%), Positives = 64/145 (44%)
 Frame = +3

Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488
           L+++L GH   V S   +      ASSS    I  W   + K  K++    +    +A S
Sbjct: 56  LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFS 115

Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668
            DS  L + +    +NI+ V SGK   +L+    ++    +      + SG+    + I 
Sbjct: 116 PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175

Query: 669 DVKTGKCLTTLLAHSDPRLSRSL*P 743
           D+ TGK L TL  H+ P  S +  P
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSP 200


>ref|XP_587553.2| PREDICTED: similar to TAF5-like RNA polymerase II
           p300/CBP-associated factor-associated factor 65 kDa
           subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta)
           [Bos taurus]
          Length = 310

 Score = 75.5 bits (184), Expect = 7e-14
 Identities = 38/124 (30%), Positives = 59/124 (47%)
 Frame = +3

Query: 324 AGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNL 503
           AGH   V   KF PN  +LA+ S  K +  W        +  +G    +  +A S +   
Sbjct: 144 AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKY 203

Query: 504 LVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTG 683
           L SA +D+ L +WD++SG     L GH+  +    F   S+L+ S S   SV + D+++ 
Sbjct: 204 LASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSS 263

Query: 684 KCLT 695
            C T
Sbjct: 264 HCST 267



 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 30/87 (34%), Positives = 46/87 (52%)
 Frame = +3

Query: 327 GHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLL 506
           GH   V S  F+PNG++LAS+   + +  W        K L G +  I+ +  S DS+L+
Sbjct: 187 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLV 246

Query: 507 VSASDDKTLNIWDVSSGKCLITLNGHS 587
            SAS D ++ +WD+ S  C    +G S
Sbjct: 247 ASASMDNSVRVWDIRSSHCSTPADGSS 273



 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 39/141 (27%), Positives = 54/141 (38%)
 Frame = +3

Query: 321 LAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSN 500
           L GH   V S +F  +   L S S    I  W            G +  + D+  S  S 
Sbjct: 59  LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSL 118

Query: 501 LLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKT 680
              SAS D+T  +W       L    GH   V C  FH  SN + +GS  ++V +   + 
Sbjct: 119 YFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQ 178

Query: 681 GKCLTTLLAHSDPRLSRSL*P 743
           G  +     H  P LS +  P
Sbjct: 179 GNSVRLFTGHRGPVLSLAFSP 199


>ref|NP_001033649.1| WD repeat domain 51A [Bos taurus]
          Length = 407

 Score = 75.1 bits (183), Expect = 9e-14
 Identities = 41/132 (31%), Positives = 63/132 (47%)
 Frame = +3

Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494
           +  AGH  AV+   F+P+G  LAS S  K +  W    +         +  +  V   SD
Sbjct: 55  YRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSD 114

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674
               V+ASDDKT+ +W     K L +L+ H ++V C  F     LIVS S  ++V + D 
Sbjct: 115 GQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 174

Query: 675 KTGKCLTTLLAH 710
            + +C+ +   H
Sbjct: 175 TSRECVHSYCEH 186



 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 40/128 (31%), Positives = 63/128 (49%)
 Frame = +3

Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509
           HT  V S  F  +G+   ++S  K +  W  + +KF  +LS     +     S D  L+V
Sbjct: 102 HTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIV 161

Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKC 689
           SASDDKT+ +WD +S +C+ +   H  +V   +FH     I +     +V + DV+T + 
Sbjct: 162 SASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRL 221

Query: 690 LTTLLAHS 713
           L     HS
Sbjct: 222 LQHYQLHS 229



 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 39/135 (28%), Positives = 63/135 (46%)
 Frame = +3

Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494
           F+L+ H   V  AKF+P+G  + S+S  K +  W    R+   +       ++ V     
Sbjct: 139 FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPS 198

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674
              + +A  D T+ +WDV + + L     HS  V   +FH   N +V+ S   ++ ILD+
Sbjct: 199 GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDL 258

Query: 675 KTGKCLTTLLAHSDP 719
             G+ L TL  H  P
Sbjct: 259 MEGRLLYTLHGHQGP 273



 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 30/112 (26%), Positives = 47/112 (41%)
 Frame = +3

Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509
           H   V+   F P+G  +A++     +  W     +  +     S  ++ ++     N LV
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 245

Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMI 665
           +AS D TL I D+  G+ L TL+GH        F        SG   E VM+
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297


>ref|XP_603483.2| PREDICTED: similar to WD repeat domain 51B [Bos taurus]
          Length = 495

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 39/126 (30%), Positives = 63/126 (50%)
 Frame = +3

Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494
           F   GH   ++S +F+P G  LAS+S  + I  W    R         +  +  V  S+D
Sbjct: 71  FRYVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSAD 130

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674
              L SAS+DK++ +W++   + L +L  H+H+V C  F     LIVS S  +++ I D 
Sbjct: 131 GQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 190

Query: 675 KTGKCL 692
              +C+
Sbjct: 191 TNKQCV 196



 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 42/135 (31%), Positives = 66/135 (48%)
 Frame = +3

Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494
           ++L  HT  V  AKF+P+G  + S S  K I  W   +++     S      + VA + +
Sbjct: 155 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPN 214

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674
              + SA  D T+ IWD+   K L     HS  V C +FH   N +++ S   ++ ILD+
Sbjct: 215 GTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDL 274

Query: 675 KTGKCLTTLLAHSDP 719
             G+ + TL  H+ P
Sbjct: 275 LEGRLIYTLQGHTGP 289



 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
 Frame = +3

Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509
           HT  V S  F+ +G++LAS+S  K I  W  Y ++F  +L   +  +     S D  L+V
Sbjct: 118 HTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 177

Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCN---FHLQSNLIVSGSFHESVMILDVKT 680
           S S+DKT+ IWD ++ +C   +N  S +V   N   F+     I S     +V I D++ 
Sbjct: 178 SCSEDKTIKIWDTTNKQC---VNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRV 234

Query: 681 GKCLTTLLAHS 713
            K L     HS
Sbjct: 235 NKLLQHYQVHS 245


>ref|XP_883815.1| PREDICTED: similar to F-box protein FBW7 isoform 1 isoform 6 [Bos
           taurus]
          Length = 706

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 38/114 (33%), Positives = 62/114 (54%)
 Frame = +3

Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548
           G  + S S    +  W A   K  +TL G + G+   +     N+++S S D+TL +W+ 
Sbjct: 390 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVW--SSQMRDNIIISGSTDRTLKVWNA 447

Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAH 710
            +G+C+ TL GH+  V C   HL    +VSGS   ++ + D++TG+CL  L+ H
Sbjct: 448 ETGECIHTLYGHTSTVRC--MHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGH 499



 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 45/134 (33%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS-D 494
           TL GHT  V S++   N   + S S  + +  W A   +   TL G +   S V C    
Sbjct: 415 TLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHT---STVRCMHLH 469

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674
              +VS S D TL +WD+ +G+CL  L GH   V C  +      +VSG++   V + D 
Sbjct: 470 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDP 527

Query: 675 KTGKCLTTLLAHSD 716
           +T  CL TL  H++
Sbjct: 528 ETETCLHTLQGHTN 541



 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 3/132 (2%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           TL GHT  V S +F  +G  + S S    I  W         TL+G     S +      
Sbjct: 535 TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-- 590

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNG---HSHYVFCCNFHLQSNLIVSGSFHESVMIL 668
           N+LVS + D T+ IWD+ +G+CL TL G   H   V C  F+   N +++ S   +V + 
Sbjct: 591 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLW 648

Query: 669 DVKTGKCLTTLL 704
           D+KTG+ +  L+
Sbjct: 649 DLKTGEFIRNLV 660



 Score = 58.9 bits (141), Expect = 7e-09
 Identities = 50/175 (28%), Positives = 74/175 (42%), Gaps = 5/175 (2%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS-D 494
           TL GHT  V       + + + S S    +  W     +    L G    ++ V C   D
Sbjct: 455 TLYGHTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGH---VAAVRCVQYD 509

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674
              +VS + D  + +WD  +  CL TL GH++ V+   F      +VSGS   S+ + DV
Sbjct: 510 GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDV 567

Query: 675 KTGKCLTTLLAH----SDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNL 827
           +TG C+ TL  H    S   L  ++      D   +      IWD   G CL+ L
Sbjct: 568 ETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVK------IWDIKTGQCLQTL 616


  Database: RefSeqBP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 16,112,626
  Number of sequences in database:  33,508
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,901,815
Number of Sequences: 33508
Number of extensions: 887809
Number of successful extensions: 4694
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 3243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4431
length of database: 16,112,626
effective HSP length: 103
effective length of database: 12,661,302
effective search space used: 3393228936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqSP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-020080
         (1115 letters)

Database: RefSeqSP 
           1040 sequences; 434,620 total letters

Searching...done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_999415.1| platelet-activating factor acetylhydrolase Ib-a...    79   3e-16
Alignment   gi|NP_999497.1| G-beta like protein [Sus scrofa]                      55   3e-09

>ref|NP_999415.1| platelet-activating factor acetylhydrolase Ib-alpha subunit [Sus
           scrofa]
          Length = 410

 Score = 78.6 bits (192), Expect = 3e-16
 Identities = 40/135 (29%), Positives = 66/135 (48%)
 Frame = +3

Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491
           K+ L+GH   V+   F P    + S+S    I  W      FE+TL G +  + D++   
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160

Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671
              LL S S D T+ +WD    +C+ T++GH H V         + IVS +  +++ + +
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWE 220

Query: 672 VKTGKCLTTLLAHSD 716
           V+TG C+ T   H +
Sbjct: 221 VQTGYCVKTFTGHRE 235



 Score = 76.3 bits (186), Expect = 1e-15
 Identities = 44/131 (33%), Positives = 66/131 (50%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           TL GHT +V    F  +G+ LAS SA   I  W     +  +T+ G    +S VA   + 
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
           + +VSA+ DKT+ +W+V +G C+ T  GH  +V     +    LI S S  ++V +  V 
Sbjct: 205 DHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264

Query: 678 TGKCLTTLLAH 710
           T +C   L  H
Sbjct: 265 TKECKAELREH 275



 Score = 75.9 bits (185), Expect = 2e-15
 Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           T+ GH   VSS    PNG+ + S++  K I  W        KT +G    +  V  + D 
Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSN----------------- 626
            L+ S S+D+T+ +W V++ +C   L  H H V C ++  +S+                 
Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGK 306

Query: 627 ---LIVSGSFHESVMILDVKTGKCLTTLLAHSD 716
               ++SGS  +++ + DV TG CL TL+ H +
Sbjct: 307 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339



 Score = 66.6 bits (161), Expect = 1e-12
 Identities = 33/103 (32%), Positives = 52/103 (50%)
 Frame = +3

Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548
           G +L S S  K I  W         TL G    +  V   S    ++S +DDKTL +WD 
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367

Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
            + +C+ TLN H H+V   +FH  +  +V+GS  ++V + + +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410



 Score = 64.7 bits (156), Expect = 4e-12
 Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 20/151 (13%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLS-----------GPSL 464
           T  GH + V   +   +G  +AS S  + +  W    ++ +  L             P  
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 288

Query: 465 GISDVACSSDSN---------LLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHL 617
             S ++ ++ S           L+S S DKT+ +WDVS+G CL+TL GH ++V    FH 
Sbjct: 289 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 348

Query: 618 QSNLIVSGSFHESVMILDVKTGKCLTTLLAH 710
               I+S +  +++ + D K  +C+ TL AH
Sbjct: 349 GGKFILSCADDKTLRVWDYKNKRCMKTLNAH 379


>ref|NP_999497.1| G-beta like protein [Sus scrofa]
          Length = 317

 Score = 55.1 bits (131), Expect = 3e-09
 Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
 Frame = +3

Query: 309 LKFTLAGHTKAVSSAKFTPN-GEWLASSSAHKLINTWGAYHRKF-----EKTLSGPSLGI 470
           L+ TL GH   V+    TP   + + S+S  K I  W     +      ++ L G S  +
Sbjct: 7   LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66

Query: 471 SDVACSSDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFH 650
           SDV  SSD    +S S D TL +WD+++G       GH+  V    F   +  IVSGS  
Sbjct: 67  SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126

Query: 651 ESVMILDVKTGKCLTTL 701
           +++ + +   G C  T+
Sbjct: 127 KTIKLWNT-LGVCKYTV 142



 Score = 49.3 bits (116), Expect = 2e-07
 Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 3/128 (2%)
 Frame = +3

Query: 327 GHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHR-KFEKTLSGPSLGISDVACSSDSN- 500
           GHTK V S  F+ +   + S S  K I  W      K+       S  +S V  S +S+ 
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 162

Query: 501 -LLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
            ++VS   DK + +W++++ K      GH+ Y+         +L  SG      M+ D+ 
Sbjct: 163 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 222

Query: 678 TGKCLTTL 701
            GK L TL
Sbjct: 223 EGKHLYTL 230


  Database: RefSeqSP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 434,620
  Number of sequences in database:  1040
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 924,191
Number of Sequences: 1040
Number of extensions: 22640
Number of successful extensions: 89
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 434,620
effective HSP length: 78
effective length of database: 353,500
effective search space used: 103575500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqCP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-020080
         (1115 letters)

Database: RefSeqCP 
           33,732 sequences; 19,266,565 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_850117.1| PREDICTED: similar to WD repeat domain 5 [Canis...   248   8e-66
Alignment   gi|XP_534593.2| PREDICTED: similar to CG7568-PA [Canis familiaris]    81   2e-15
Alignment   gi|XP_537775.2| PREDICTED: similar to platelet-activating facto...    80   5e-15
Alignment   gi|XP_868519.1| PREDICTED: similar to platelet-activating facto...    80   5e-15
Alignment   gi|XP_854482.1| PREDICTED: similar to platelet-activating facto...    80   5e-15
Alignment   gi|XP_868508.1| PREDICTED: similar to platelet-activating facto...    80   5e-15
Alignment   gi|XP_541857.2| PREDICTED: similar to WD repeat domain 51A isof...    77   2e-14
Alignment   gi|XP_536215.2| PREDICTED: similar to WD repeat domain 61 isofo...    77   4e-14
Alignment   gi|XP_859995.1| PREDICTED: similar to WD repeat domain 51A isof...    76   5e-14
Alignment   gi|XP_546100.2| PREDICTED: similar to TAF5-like RNA polymerase ...    76   7e-14

>ref|XP_850117.1| PREDICTED: similar to WD repeat domain 5 [Canis familiaris]
          Length = 334

 Score =  248 bits (633), Expect = 8e-66
 Identities = 154/294 (52%), Positives = 173/294 (58%)
 Frame = +3

Query: 201  MATAENKXXXXXXXXXXXXXXXXXXSKXXXXXXXXXLKFTLAGHTKAVSSAKFTPNGEWL 380
            MAT E K                  SK         LKFTLAGHTKAVSS KF+PNGEWL
Sbjct: 1    MATEEKKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWL 60

Query: 381  ASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDVSSGK 560
            ASSSA KLI  WGAY  KFEKT+SG  LGISDVA SSDSNLLVSASDDKTL IWDVSSGK
Sbjct: 61   ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120

Query: 561  CLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSDPRLSRSL* 740
            CL TL GHS+YVFCCNF+ QSNLIVSGSF ESV I DVKTGKCL TL AHSDP  +    
Sbjct: 121  CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180

Query: 741  PGRFPDCFKRYHGLCWIWDTPFGPCLKNLIDDYNSPLVLRKILSQRQVLFVPYP*KHP*T 920
                      Y GLC         C+K ++DD N P+   K  S      +     +   
Sbjct: 181  RDGSLIVSSSYDGLCGKTGNAASRCMKLILDDDNPPVSFVK-FSPNGKYILAATLDNTLK 239

Query: 921  SLNYPKENVLKKVTGPPKLKKNCEFSKFSFVPGRGK*MLFGLQKKLPFFYFLYT 1082
              +Y K   LK  TG  K +K C F+ FS V G GK ++ G +  L + + L T
Sbjct: 240  LWDYSKGKCLKTYTG-HKNEKYCIFANFS-VTG-GKWIVSGSEDNLVYIWNLQT 290



 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWG-AYHRKFEKTLSGPSLGISDVACSSD 494
           TL  H+  VS+  F  +G  + SSS   L    G A  R  +  L   +  +S V  S +
Sbjct: 166 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCGKTGNAASRCMKLILDDDNPPVSFVKFSPN 225

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFC--CNFHLQSNL-IVSGSFHESVMI 665
              +++A+ D TL +WD S GKCL T  GH +  +C   NF +     IVSGS    V I
Sbjct: 226 GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285

Query: 666 LDVKTGKCLTTLLAHSDPRLSRSL*P 743
            +++T + +  L  H+D  +S +  P
Sbjct: 286 WNLQTKEIVQKLQGHTDVVISTACHP 311


>ref|XP_534593.2| PREDICTED: similar to CG7568-PA [Canis familiaris]
          Length = 415

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 52/171 (30%), Positives = 73/171 (42%)
 Frame = +3

Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494
           FTL GH+  + S  F  +G+ + + S    +  W A   +   TL G    IS    + D
Sbjct: 213 FTLRGHSAEIISLSFNTSGDRIVTGSFDHTVAVWEADTGRKVYTLIGHCAEISSALFNWD 272

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674
            +L+++ S DKT  +WD S+GKC+ TL GH   +    F     LI + S   +  +   
Sbjct: 273 CSLILTGSMDKTCMLWDASNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVFSA 332

Query: 675 KTGKCLTTLLAHSDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNL 827
            T KCLT L  H       S  P               IWD   G CL+ L
Sbjct: 333 ATRKCLTKLEGHEGEISKISFNPQGNRLLTGSADETARIWDAQTGQCLQVL 383



 Score = 79.3 bits (194), Expect = 6e-15
 Identities = 53/175 (30%), Positives = 82/175 (46%), Gaps = 5/175 (2%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFT-PNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494
           TL GH   V +  F  P G+ +A+ S  K    W     K   T  G +  I  ++ +  
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQ 188

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674
           S L+ + S D T  +WD+ SG+ + TL GHS  +   +F+   + IV+GSF  +V + + 
Sbjct: 189 STLVATGSMDTTAKLWDIQSGEEVFTLRGHSAEIISLSFNTSGDRIVTGSFDHTVAVWEA 248

Query: 675 KTGKCLTTLLAHSDPRLSRSL*PGRFPDCFKRYHG----LCWIWDTPFGPCLKNL 827
            TG+ + TL+ H    +S +L      DC     G     C +WD   G C+  L
Sbjct: 249 DTGRKVYTLIGHC-AEISSALFNW---DCSLILTGSMDKTCMLWDASNGKCVATL 299



 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 44/134 (32%), Positives = 67/134 (50%)
 Frame = +3

Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494
           +TL GH   +SSA F  +   + + S  K    W A + K   TL+G    I D      
Sbjct: 255 YTLIGHCAEISSALFNWDCSLILTGSMDKTCMLWDASNGKCVATLTGHDDEILDSCFDYT 314

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674
             L+ +AS D T  ++  ++ KCL  L GH   +   +F+ Q N +++GS  E+  I D 
Sbjct: 315 GKLIATASADGTARVFSAATRKCLTKLEGHEGEISKISFNPQGNRLLTGSADETARIWDA 374

Query: 675 KTGKCLTTLLAHSD 716
           +TG+CL  L  H+D
Sbjct: 375 QTGQCLQVLEGHTD 388



 Score = 73.2 bits (178), Expect = 4e-13
 Identities = 38/133 (28%), Positives = 64/133 (48%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           T  GHT  +    F P    +A+ S       W     +   TL G S  I  ++ ++  
Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLRGHSAEIISLSFNTSG 231

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
           + +V+ S D T+ +W+  +G+ + TL GH   +    F+   +LI++GS  ++ M+ D  
Sbjct: 232 DRIVTGSFDHTVAVWEADTGRKVYTLIGHCAEISSALFNWDCSLILTGSMDKTCMLWDAS 291

Query: 678 TGKCLTTLLAHSD 716
            GKC+ TL  H D
Sbjct: 292 NGKCVATLTGHDD 304



 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 36/109 (33%), Positives = 59/109 (54%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           TL GH   +  + F   G+ +A++SA      + A  RK    L G    IS ++ +   
Sbjct: 298 TLTGHDDEILDSCFDYTGKLIATASADGTARVFSAATRKCLTKLEGHEGEISKISFNPQG 357

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGS 644
           N L++ S D+T  IWD  +G+CL  L GH+  +F C F+ + ++I++GS
Sbjct: 358 NRLLTGSADETARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGS 406



 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
 Frame = +3

Query: 441 KTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNF-HL 617
           K L    L +++VA +   +  ++ S D+T  +WD +SG+ L TL GH + V+   F + 
Sbjct: 86  KVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNP 145

Query: 618 QSNLIVSGSFHESVMILDVKTGKCLTTLLAHS 713
             + I +GSF ++  +  V+TGKC  T   H+
Sbjct: 146 YGDKIATGSFDKTCKLWSVETGKCYHTFRGHT 177


>ref|XP_537775.2| PREDICTED: similar to platelet-activating factor acetylhydrolase
           beta subunit isoform 1 [Canis familiaris]
          Length = 372

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 41/135 (30%), Positives = 66/135 (48%)
 Frame = +3

Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491
           K+ L+GH   V+   F P    + S+S    I  W      FE+TL G +  + D++   
Sbjct: 63  KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 122

Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671
              LL S S D T+ +WD    +C+ T++GH H V         + IVS S  +++ + +
Sbjct: 123 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 182

Query: 672 VKTGKCLTTLLAHSD 716
           V+TG C+ T   H +
Sbjct: 183 VQTGYCVKTFTGHRE 197



 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 45/131 (34%), Positives = 66/131 (50%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           TL GHT +V    F  +G+ LAS SA   I  W     +  +T+ G    +S VA   + 
Sbjct: 107 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 166

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
           + +VSAS DKT+ +W+V +G C+ T  GH  +V     +    LI S S  ++V +  V 
Sbjct: 167 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 226

Query: 678 TGKCLTTLLAH 710
           T +C   L  H
Sbjct: 227 TKECKAELREH 237



 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           T+ GH   VSS    PNG+ + S+S  K I  W        KT +G    +  V  + D 
Sbjct: 149 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 208

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSN----------------- 626
            L+ S S+D+T+ +W V++ +C   L  H H V C ++  +S+                 
Sbjct: 209 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGK 268

Query: 627 ---LIVSGSFHESVMILDVKTGKCLTTLLAHSD 716
               ++SGS  +++ + DV TG CL TL+ H +
Sbjct: 269 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 301



 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 33/103 (32%), Positives = 52/103 (50%)
 Frame = +3

Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548
           G +L S S  K I  W         TL G    +  V   S    ++S +DDKTL +WD 
Sbjct: 270 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 329

Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
            + +C+ TLN H H+V   +FH  +  +V+GS  ++V + + +
Sbjct: 330 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 372


>ref|XP_868519.1| PREDICTED: similar to platelet-activating factor acetylhydrolase
           beta subunit isoform 5 [Canis familiaris]
          Length = 415

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 41/135 (30%), Positives = 66/135 (48%)
 Frame = +3

Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491
           K+ L+GH   V+   F P    + S+S    I  W      FE+TL G +  + D++   
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160

Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671
              LL S S D T+ +WD    +C+ T++GH H V         + IVS S  +++ + +
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220

Query: 672 VKTGKCLTTLLAHSD 716
           V+TG C+ T   H +
Sbjct: 221 VQTGYCVKTFTGHRE 235



 Score = 79.0 bits (193), Expect = 8e-15
 Identities = 59/201 (29%), Positives = 85/201 (42%), Gaps = 26/201 (12%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           TL GHT +V    F  +G+ LAS SA   I  W     +  +T+ G    +S VA   + 
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
           + +VSAS DKT+ +W+V +G C+ T  GH  +V     +    LI S S  ++V +  V 
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264

Query: 678 TGKCLTTLLAH--------------------------SDPRLSRSL*PGRFPDCFKRYHG 779
           T +C   L  H                           +PR  +S  PG F     R   
Sbjct: 265 TKECKAELREHEHVVECISWAPESSYSSISEATGSEEENPRTKKSGKPGPFLLSGSRDKT 324

Query: 780 LCWIWDTPFGPCLKNLIDDYN 842
           +  +WD   G CL  L+   N
Sbjct: 325 I-KMWDVSTGMCLMTLVGHDN 344



 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 33/103 (32%), Positives = 52/103 (50%)
 Frame = +3

Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548
           G +L S S  K I  W         TL G    +  V   S    ++S +DDKTL +WD 
Sbjct: 313 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 372

Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
            + +C+ TLN H H+V   +FH  +  +V+GS  ++V + + +
Sbjct: 373 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 415



 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTL--------------SG 455
           T  GH + V   +   +G  +AS S  + +  W    ++ +  L                
Sbjct: 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 288

Query: 456 PSLGISDVACSSDSN-----------LLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFC 602
               IS+   S + N            L+S S DKT+ +WDVS+G CL+TL GH ++V  
Sbjct: 289 SYSSISEATGSEEENPRTKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 348

Query: 603 CNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAH 710
             FH     I+S +  +++ + D K  +C+ TL AH
Sbjct: 349 VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 384


>ref|XP_854482.1| PREDICTED: similar to platelet-activating factor acetylhydrolase
           beta subunit isoform 2 [Canis familiaris]
          Length = 410

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 41/135 (30%), Positives = 66/135 (48%)
 Frame = +3

Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491
           K+ L+GH   V+   F P    + S+S    I  W      FE+TL G +  + D++   
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160

Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671
              LL S S D T+ +WD    +C+ T++GH H V         + IVS S  +++ + +
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220

Query: 672 VKTGKCLTTLLAHSD 716
           V+TG C+ T   H +
Sbjct: 221 VQTGYCVKTFTGHRE 235



 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 45/131 (34%), Positives = 66/131 (50%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           TL GHT +V    F  +G+ LAS SA   I  W     +  +T+ G    +S VA   + 
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
           + +VSAS DKT+ +W+V +G C+ T  GH  +V     +    LI S S  ++V +  V 
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264

Query: 678 TGKCLTTLLAH 710
           T +C   L  H
Sbjct: 265 TKECKAELREH 275



 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           T+ GH   VSS    PNG+ + S+S  K I  W        KT +G    +  V  + D 
Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSN----------------- 626
            L+ S S+D+T+ +W V++ +C   L  H H V C ++  +S+                 
Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGK 306

Query: 627 ---LIVSGSFHESVMILDVKTGKCLTTLLAHSD 716
               ++SGS  +++ + DV TG CL TL+ H +
Sbjct: 307 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339



 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 33/103 (32%), Positives = 52/103 (50%)
 Frame = +3

Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548
           G +L S S  K I  W         TL G    +  V   S    ++S +DDKTL +WD 
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367

Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
            + +C+ TLN H H+V   +FH  +  +V+GS  ++V + + +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410


>ref|XP_868508.1| PREDICTED: similar to platelet-activating factor acetylhydrolase
           beta subunit isoform 3 [Canis familiaris]
          Length = 345

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 41/135 (30%), Positives = 66/135 (48%)
 Frame = +3

Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491
           K+ L+GH   V+   F P    + S+S    I  W      FE+TL G +  + D++   
Sbjct: 36  KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 95

Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671
              LL S S D T+ +WD    +C+ T++GH H V         + IVS S  +++ + +
Sbjct: 96  SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 155

Query: 672 VKTGKCLTTLLAHSD 716
           V+TG C+ T   H +
Sbjct: 156 VQTGYCVKTFTGHRE 170



 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 45/131 (34%), Positives = 66/131 (50%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           TL GHT +V    F  +G+ LAS SA   I  W     +  +T+ G    +S VA   + 
Sbjct: 80  TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 139

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
           + +VSAS DKT+ +W+V +G C+ T  GH  +V     +    LI S S  ++V +  V 
Sbjct: 140 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 199

Query: 678 TGKCLTTLLAH 710
           T +C   L  H
Sbjct: 200 TKECKAELREH 210



 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           T+ GH   VSS    PNG+ + S+S  K I  W        KT +G    +  V  + D 
Sbjct: 122 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 181

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSN----------------- 626
            L+ S S+D+T+ +W V++ +C   L  H H V C ++  +S+                 
Sbjct: 182 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGK 241

Query: 627 ---LIVSGSFHESVMILDVKTGKCLTTLLAHSD 716
               ++SGS  +++ + DV TG CL TL+ H +
Sbjct: 242 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 274



 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 33/103 (32%), Positives = 52/103 (50%)
 Frame = +3

Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548
           G +L S S  K I  W         TL G    +  V   S    ++S +DDKTL +WD 
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302

Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
            + +C+ TLN H H+V   +FH  +  +V+GS  ++V + + +
Sbjct: 303 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345


>ref|XP_541857.2| PREDICTED: similar to WD repeat domain 51A isoform 1 [Canis
           familiaris]
          Length = 406

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 42/128 (32%), Positives = 65/128 (50%)
 Frame = +3

Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509
           HT  V S  F  +G+ L ++S  K +  W  + +KF  +LS     +     S D  L+V
Sbjct: 102 HTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIV 161

Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKC 689
           SASDDKT+ +WD +S +C+ +   H  +V   +FH     I + S   +V + DV+T + 
Sbjct: 162 SASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRL 221

Query: 690 LTTLLAHS 713
           L     HS
Sbjct: 222 LQHYQLHS 229



 Score = 76.3 bits (186), Expect = 5e-14
 Identities = 42/132 (31%), Positives = 64/132 (48%)
 Frame = +3

Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494
           +  AGH  AV+   F+P+G  LAS S  K +  W    +         +  +  V   SD
Sbjct: 55  YRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSD 114

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674
              LV+ASDDKT+ +W     K L +L+ H ++V C  F     LIVS S  ++V + D 
Sbjct: 115 GQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDK 174

Query: 675 KTGKCLTTLLAH 710
            + +C+ +   H
Sbjct: 175 TSRECVHSYCEH 186



 Score = 65.5 bits (158), Expect = 9e-11
 Identities = 38/135 (28%), Positives = 64/135 (47%)
 Frame = +3

Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494
           F+L+ H   V  A+F+P+G  + S+S  K +  W    R+   +       ++ V     
Sbjct: 139 FSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPS 198

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674
              + +AS D T+ +WDV + + L     HS  V   +FH   N +++ S   ++ ILD+
Sbjct: 199 GTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDL 258

Query: 675 KTGKCLTTLLAHSDP 719
             G+ L TL  H  P
Sbjct: 259 MEGRLLYTLHGHQGP 273



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 30/112 (26%), Positives = 48/112 (42%)
 Frame = +3

Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509
           H   V+   F P+G  +A++S    +  W     +  +     S  ++ ++     N L+
Sbjct: 186 HGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLL 245

Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMI 665
           +AS D TL I D+  G+ L TL+GH        F        SG   E VM+
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297


>ref|XP_536215.2| PREDICTED: similar to WD repeat domain 61 isoform 1 [Canis
           familiaris]
          Length = 305

 Score = 76.6 bits (187), Expect = 4e-14
 Identities = 46/135 (34%), Positives = 70/135 (51%)
 Frame = +3

Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491
           +++L    K + S  ++P+G++LAS +   +IN +     K   TL G ++ I  +  S 
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200

Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671
           DS LLV+ASDD  + I+DV       TL+GH+ +V    F       VS S  +SV + D
Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260

Query: 672 VKTGKCLTTLLAHSD 716
           V T  C+ T   H D
Sbjct: 261 VGTRTCVHTFFDHQD 275



 Score = 63.2 bits (152), Expect = 5e-10
 Identities = 35/121 (28%), Positives = 58/121 (47%)
 Frame = +3

Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488
           L  TL GH   + S  F+P+ + L ++S    I  +   H     TLSG +  + +VA  
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241

Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668
            D    VS+S DK++ +WDV +  C+ T   H   V+   ++   + IVS    + + + 
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301

Query: 669 D 671
           D
Sbjct: 302 D 302



 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 43/159 (27%), Positives = 70/159 (44%)
 Frame = +3

Query: 357 FTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLN 536
           F+P+ ++LA+ +    +N +G    K E +L      I  +A S D   L S + D  +N
Sbjct: 114 FSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 173

Query: 537 IWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSD 716
           I+D+++GK L TL GH+  +    F   S L+V+ S    + I DV+      TL  H+ 
Sbjct: 174 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 233

Query: 717 PRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLID 833
             L+ +  P               +WD     C+    D
Sbjct: 234 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 272



 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 40/145 (27%), Positives = 64/145 (44%)
 Frame = +3

Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488
           L+++L GH   V S   +      ASSS    I  W   + K  K++    +    +A S
Sbjct: 56  LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFS 115

Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668
            DS  L + +    +NI+ V SGK   +L+    ++    +      + SG+    + I 
Sbjct: 116 PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175

Query: 669 DVKTGKCLTTLLAHSDPRLSRSL*P 743
           D+ TGK L TL  H+ P  S +  P
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSP 200


>ref|XP_859995.1| PREDICTED: similar to WD repeat domain 51A isoform 2 [Canis
           familiaris]
          Length = 388

 Score = 76.3 bits (186), Expect = 5e-14
 Identities = 42/132 (31%), Positives = 64/132 (48%)
 Frame = +3

Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494
           +  AGH  AV+   F+P+G  LAS S  K +  W    +         +  +  V   SD
Sbjct: 55  YRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSD 114

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674
              LV+ASDDKT+ +W     K L +L+ H ++V C  F     LIVS S  ++V + D 
Sbjct: 115 GQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDK 174

Query: 675 KTGKCLTTLLAH 710
            + +C+ +   H
Sbjct: 175 TSRECVHSYCEH 186



 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 24/154 (15%)
 Frame = +3

Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509
           HT  V S  F  +G+ L ++S  K +  W  + +KF  +LS     +     S D  L+V
Sbjct: 102 HTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIV 161

Query: 510 SASDDKTLNIWDVSSGKCLIT------------------------LNGHSHYVFCCNFHL 617
           SASDDKT+ +WD +S +C+ +                        +N HS  V   +FH 
Sbjct: 162 SASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCISSSGVNVHSAAVNALSFHP 221

Query: 618 QSNLIVSGSFHESVMILDVKTGKCLTTLLAHSDP 719
             N +++ S   ++ ILD+  G+ L TL  H  P
Sbjct: 222 SGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGP 255



 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 39/141 (27%), Positives = 56/141 (39%), Gaps = 24/141 (17%)
 Frame = +3

Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTL--------------S 452
           F+L+ H   V  A+F+P+G  + S+S  K +  W    R+   +               S
Sbjct: 139 FSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPS 198

Query: 453 GPSLGISDVACSS----------DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFC 602
           G  +  S V   S            N L++AS D TL I D+  G+ L TL+GH      
Sbjct: 199 GTCISSSGVNVHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATT 258

Query: 603 CNFHLQSNLIVSGSFHESVMI 665
             F        SG   E VM+
Sbjct: 259 VAFSRTGEYFASGGSDEQVMV 279


>ref|XP_546100.2| PREDICTED: similar to TAF5-like RNA polymerase II
           p300/CBP-associated factor-associated factor 65 kDa
           subunit 5L (PCAF associated factor 65 beta) (PAF65-beta)
           [Canis familiaris]
          Length = 589

 Score = 75.9 bits (185), Expect = 7e-14
 Identities = 40/124 (32%), Positives = 59/124 (47%)
 Frame = +3

Query: 324 AGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNL 503
           AGH   V   KF PN  +LA+ S  K +  W A      +  +G    +  +A S +   
Sbjct: 423 AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKY 482

Query: 504 LVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTG 683
           L SA +D+ L +WD++SG     L GH+  +    F   S+LI S S   SV + D++  
Sbjct: 483 LASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNT 542

Query: 684 KCLT 695
            C T
Sbjct: 543 YCST 546



 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 29/87 (33%), Positives = 46/87 (52%)
 Frame = +3

Query: 327 GHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLL 506
           GH   V S  F+PNG++LAS+   + +  W        K L G +  I+ +  S DS+L+
Sbjct: 466 GHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLI 525

Query: 507 VSASDDKTLNIWDVSSGKCLITLNGHS 587
            SAS D ++ +WD+ +  C    +G S
Sbjct: 526 ASASMDNSVRVWDIRNTYCSTPADGSS 552



 Score = 52.4 bits (124), Expect = 8e-07
 Identities = 38/141 (26%), Positives = 53/141 (37%)
 Frame = +3

Query: 321 LAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSN 500
           L GH   V S +F  +   L S S    I  W            G +  + D+  S  S 
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSL 397

Query: 501 LLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKT 680
              S S D+T  +W       L    GH   V C  FH  SN + +GS  ++V +   + 
Sbjct: 398 YFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 457

Query: 681 GKCLTTLLAHSDPRLSRSL*P 743
           G  +     H  P LS +  P
Sbjct: 458 GNSVRLFTGHRGPVLSLAFSP 478


  Database: RefSeqCP
    Posted date:  Aug 1, 2006  9:25 PM
  Number of letters in database: 19,266,565
  Number of sequences in database:  33,732
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,105,551
Number of Sequences: 33732
Number of extensions: 1046356
Number of successful extensions: 5424
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 3722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5062
length of database: 19,266,565
effective HSP length: 104
effective length of database: 15,758,437
effective search space used: 4207502679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqHP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-020080
         (1115 letters)

Database: RefSeqHP 
           39,411 sequences; 17,774,539 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_438172.1| WD repeat domain 5 [Homo sapiens]                    266   2e-71
Alignment   gi|NP_060058.1| WD repeat domain 5 [Homo sapiens]                    266   2e-71
Alignment   gi|NP_061942.2| WD repeat domain 5B [Homo sapiens]                   232   5e-61
Alignment   gi|NP_000421.1| platelet-activating factor acetylhydrolase, iso...    80   4e-15
Alignment   gi|NP_849143.1| hypothetical protein LOC164781 [Homo sapiens]         78   1e-14
Alignment   gi|NP_079510.1| WD repeat domain 61 [Homo sapiens]                    77   3e-14
Alignment   gi|NP_078808.3| sperm associated antigen 16 isoform 1 [Homo sap...    75   8e-14
Alignment   gi|NP_056241.2| WD repeat domain 51A [Homo sapiens]                   75   1e-13
Alignment   gi|XP_934992.1| PREDICTED: similar to CG7704-PA isoform 1 [Homo...    75   1e-13
Alignment   gi|XP_947007.1| PREDICTED: similar to CG7704-PA isoform 1 [Homo...    75   1e-13

>ref|NP_438172.1| WD repeat domain 5 [Homo sapiens]
          Length = 334

 Score =  266 bits (680), Expect = 2e-71
 Identities = 162/294 (55%), Positives = 178/294 (60%)
 Frame = +3

Query: 201  MATAENKXXXXXXXXXXXXXXXXXXSKXXXXXXXXXLKFTLAGHTKAVSSAKFTPNGEWL 380
            MAT E K                  SK         LKFTLAGHTKAVSS KF+PNGEWL
Sbjct: 1    MATEEKKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWL 60

Query: 381  ASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDVSSGK 560
            ASSSA KLI  WGAY  KFEKT+SG  LGISDVA SSDSNLLVSASDDKTL IWDVSSGK
Sbjct: 61   ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120

Query: 561  CLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSDPRLSRSL* 740
            CL TL GHS+YVFCCNF+ QSNLIVSGSF ESV I DVKTGKCL TL AHSDP  +    
Sbjct: 121  CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180

Query: 741  PGRFPDCFKRYHGLCWIWDTPFGPCLKNLIDDYNSPLVLRKILSQRQVLFVPYP*KHP*T 920
                      Y GLC IWDT  G CLK LIDD N P+   K  S      +     +   
Sbjct: 181  RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK-FSPNGKYILAATLDNTLK 239

Query: 921  SLNYPKENVLKKVTGPPKLKKNCEFSKFSFVPGRGK*MLFGLQKKLPFFYFLYT 1082
              +Y K   LK  TG  K +K C F+ FS V G GK ++ G +  L + + L T
Sbjct: 240  LWDYSKGKCLKTYTG-HKNEKYCIFANFS-VTG-GKWIVSGSEDNLVYIWNLQT 290



 Score = 69.3 bits (168), Expect = 6e-12
 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTL-SGPSLGISDVACSSD 494
           TL  H+  VS+  F  +G  + SSS   L   W     +  KTL    +  +S V  S +
Sbjct: 166 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 225

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFC--CNFHLQSNL-IVSGSFHESVMI 665
              +++A+ D TL +WD S GKCL T  GH +  +C   NF +     IVSGS    V I
Sbjct: 226 GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285

Query: 666 LDVKTGKCLTTLLAHSDPRLSRSL*P 743
            +++T + +  L  H+D  +S +  P
Sbjct: 286 WNLQTKEIVQKLQGHTDVVISTACHP 311


>ref|NP_060058.1| WD repeat domain 5 [Homo sapiens]
          Length = 334

 Score =  266 bits (680), Expect = 2e-71
 Identities = 162/294 (55%), Positives = 178/294 (60%)
 Frame = +3

Query: 201  MATAENKXXXXXXXXXXXXXXXXXXSKXXXXXXXXXLKFTLAGHTKAVSSAKFTPNGEWL 380
            MAT E K                  SK         LKFTLAGHTKAVSS KF+PNGEWL
Sbjct: 1    MATEEKKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWL 60

Query: 381  ASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDVSSGK 560
            ASSSA KLI  WGAY  KFEKT+SG  LGISDVA SSDSNLLVSASDDKTL IWDVSSGK
Sbjct: 61   ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120

Query: 561  CLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSDPRLSRSL* 740
            CL TL GHS+YVFCCNF+ QSNLIVSGSF ESV I DVKTGKCL TL AHSDP  +    
Sbjct: 121  CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180

Query: 741  PGRFPDCFKRYHGLCWIWDTPFGPCLKNLIDDYNSPLVLRKILSQRQVLFVPYP*KHP*T 920
                      Y GLC IWDT  G CLK LIDD N P+   K  S      +     +   
Sbjct: 181  RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK-FSPNGKYILAATLDNTLK 239

Query: 921  SLNYPKENVLKKVTGPPKLKKNCEFSKFSFVPGRGK*MLFGLQKKLPFFYFLYT 1082
              +Y K   LK  TG  K +K C F+ FS V G GK ++ G +  L + + L T
Sbjct: 240  LWDYSKGKCLKTYTG-HKNEKYCIFANFS-VTG-GKWIVSGSEDNLVYIWNLQT 290



 Score = 69.3 bits (168), Expect = 6e-12
 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTL-SGPSLGISDVACSSD 494
           TL  H+  VS+  F  +G  + SSS   L   W     +  KTL    +  +S V  S +
Sbjct: 166 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 225

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFC--CNFHLQSNL-IVSGSFHESVMI 665
              +++A+ D TL +WD S GKCL T  GH +  +C   NF +     IVSGS    V I
Sbjct: 226 GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285

Query: 666 LDVKTGKCLTTLLAHSDPRLSRSL*P 743
            +++T + +  L  H+D  +S +  P
Sbjct: 286 WNLQTKEIVQKLQGHTDVVISTACHP 311


>ref|NP_061942.2| WD repeat domain 5B [Homo sapiens]
          Length = 330

 Score =  232 bits (591), Expect = 5e-61
 Identities = 138/258 (53%), Positives = 164/258 (63%)
 Frame = +3

Query: 309  LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488
            LK TL GHT+AVSS KF+PNGEWLASSSA +LI  WGAY  K+EKTL G +L ISDVA S
Sbjct: 33   LKCTLVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWS 92

Query: 489  SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668
            SDS+ LVSASDDKTL +WDV SGKCL TL GHS+YVFCCNF+  SNLI+SGSF E+V I 
Sbjct: 93   SDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIW 152

Query: 669  DVKTGKCLTTLLAHSDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLIDDYNSP 848
            +VKTGKCL TL AHSDP  +              Y GLC IWD   G CLK L+DD N P
Sbjct: 153  EVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPP 212

Query: 849  LVLRKILSQRQVLFVPYP*KHP*TSLNYPKENVLKKVTGPPKLKKNCEFSKFSFVPGRGK 1028
            +   K  S      +     +     +Y +   LK  TG  K +K C F+ FS V G GK
Sbjct: 213  VSFVK-FSPNGKYILTATLDNTLKLWDYSRGRCLKTYTG-HKNEKYCIFANFS-VTG-GK 268

Query: 1029 *MLFGLQKKLPFFYFLYT 1082
             ++ G +  L + + L T
Sbjct: 269  WIVSGSEDNLVYIWNLQT 286



 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTL-SGPSLGISDVACSSD 494
           TL+ H+  VS+  F  +G  + S S   L   W A   +  KTL    +  +S V  S +
Sbjct: 162 TLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPN 221

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFC--CNFHLQSNL-IVSGSFHESVMI 665
              +++A+ D TL +WD S G+CL T  GH +  +C   NF +     IVSGS    V I
Sbjct: 222 GKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 281

Query: 666 LDVKTGKCLTTLLAHSDPRLSRSL*P 743
            +++T + +  L  H+D  +S +  P
Sbjct: 282 WNLQTKEIVQKLQGHTDVVISAACHP 307


>ref|NP_000421.1| platelet-activating factor acetylhydrolase, isoform Ib, alpha
           subunit (45kD) [Homo sapiens]
          Length = 410

 Score = 79.7 bits (195), Expect = 4e-15
 Identities = 41/135 (30%), Positives = 66/135 (48%)
 Frame = +3

Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491
           K+ L+GH   V+   F P    + S+S    I  W      FE+TL G +  + D++   
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160

Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671
              LL S S D T+ +WD    +C+ T++GH H V         + IVS S  +++ + +
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220

Query: 672 VKTGKCLTTLLAHSD 716
           V+TG C+ T   H +
Sbjct: 221 VQTGYCVKTFTGHRE 235



 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 45/131 (34%), Positives = 66/131 (50%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           TL GHT +V    F  +G+ LAS SA   I  W     +  +T+ G    +S VA   + 
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
           + +VSAS DKT+ +W+V +G C+ T  GH  +V     +    LI S S  ++V +  V 
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264

Query: 678 TGKCLTTLLAH 710
           T +C   L  H
Sbjct: 265 TKECKAELREH 275



 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           T+ GH   VSS    PNG+ + S+S  K I  W        KT +G    +  V  + D 
Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSN----------------- 626
            L+ S S+D+T+ +W V++ +C   L  H H V C ++  +S+                 
Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGK 306

Query: 627 ---LIVSGSFHESVMILDVKTGKCLTTLLAHSD 716
               ++SGS  +++ + DV TG CL TL+ H +
Sbjct: 307 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339



 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 33/103 (32%), Positives = 52/103 (50%)
 Frame = +3

Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548
           G +L S S  K I  W         TL G    +  V   S    ++S +DDKTL +WD 
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367

Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
            + +C+ TLN H H+V   +FH  +  +V+GS  ++V + + +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410


>ref|NP_849143.1| hypothetical protein LOC164781 [Homo sapiens]
          Length = 415

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 5/175 (2%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFT-PNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494
           TL GH   V +  F  P G+ +A+ S  K    W     K   T  G +  I  ++ +  
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQ 188

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674
           S L+ + S D T  +WD+ +G+ + TL GHS  +   +F+   + I++GSF  +V++ D 
Sbjct: 189 STLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDA 248

Query: 675 KTGKCLTTLLAHSDPRLSRSL*PGRFPDCFKRYHG----LCWIWDTPFGPCLKNL 827
            TG+ +  L+ H     S S       DC     G     C +WD   G C+  L
Sbjct: 249 DTGRKVNILIGHCAEISSASF----NWDCSLILTGSMDKTCKLWDATNGKCVATL 299



 Score = 75.9 bits (185), Expect = 6e-14
 Identities = 48/171 (28%), Positives = 72/171 (42%)
 Frame = +3

Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494
           +TL GH+  + S  F  +G+ + + S    +  W A   +    L G    IS  + + D
Sbjct: 213 YTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWD 272

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674
            +L+++ S DKT  +WD ++GKC+ TL GH   +    F     LI + S   +  I   
Sbjct: 273 CSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSA 332

Query: 675 KTGKCLTTLLAHSDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNL 827
            T KC+  L  H       S  P               IWD   G CL+ L
Sbjct: 333 ATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVL 383



 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 37/109 (33%), Positives = 59/109 (54%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           TL GH   +  + F   G+ +A++SA      + A  RK    L G    IS ++ +   
Sbjct: 298 TLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQG 357

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGS 644
           N L++ S DKT  IWD  +G+CL  L GH+  +F C F+ + N++++GS
Sbjct: 358 NHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGS 406



 Score = 73.2 bits (178), Expect = 4e-13
 Identities = 42/132 (31%), Positives = 65/132 (49%)
 Frame = +3

Query: 321 LAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSN 500
           L GH   +SSA F  +   + + S  K    W A + K   TL+G    I D        
Sbjct: 257 LIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGK 316

Query: 501 LLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKT 680
           L+ +AS D T  I+  ++ KC+  L GH   +   +F+ Q N +++GS  ++  I D +T
Sbjct: 317 LIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQT 376

Query: 681 GKCLTTLLAHSD 716
           G+CL  L  H+D
Sbjct: 377 GQCLQVLEGHTD 388



 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 36/133 (27%), Positives = 64/133 (48%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           T  GHT  +    F P    +A+ S       W   + +   TL G S  I  ++ ++  
Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSG 231

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
           + +++ S D T+ +WD  +G+ +  L GH   +   +F+   +LI++GS  ++  + D  
Sbjct: 232 DRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDAT 291

Query: 678 TGKCLTTLLAHSD 716
            GKC+ TL  H D
Sbjct: 292 NGKCVATLTGHDD 304



 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
 Frame = +3

Query: 441 KTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNF-HL 617
           K L    L +++VA +   +  ++ S D+T  +WD +SG+ L TL GH + V+   F + 
Sbjct: 86  KVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNP 145

Query: 618 QSNLIVSGSFHESVMILDVKTGKCLTTLLAHS 713
             + I +GSF ++  +  V+TGKC  T   H+
Sbjct: 146 YGDKIATGSFDKTCKLWSVETGKCYHTFRGHT 177


>ref|NP_079510.1| WD repeat domain 61 [Homo sapiens]
          Length = 305

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 46/135 (34%), Positives = 70/135 (51%)
 Frame = +3

Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491
           +++L    K + S  ++P+G++LAS +   +IN +     K   TL G ++ I  +  S 
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200

Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671
           DS LLV+ASDD  + I+DV       TL+GH+ +V    F       VS S  +SV + D
Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260

Query: 672 VKTGKCLTTLLAHSD 716
           V T  C+ T   H D
Sbjct: 261 VGTRTCVHTFFDHQD 275



 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 36/121 (29%), Positives = 58/121 (47%)
 Frame = +3

Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488
           L  TL GH   + S  F+P+ + L ++S    I  +   H     TLSG +  + +VA  
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241

Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668
            D    VS+S DK++ +WDV +  C+ T   H   V+   ++   + IVS    + + I 
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301

Query: 669 D 671
           D
Sbjct: 302 D 302



 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 43/159 (27%), Positives = 70/159 (44%)
 Frame = +3

Query: 357 FTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLN 536
           F+P+ ++LA+ +    +N +G    K E +L      I  +A S D   L S + D  +N
Sbjct: 114 FSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 173

Query: 537 IWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSD 716
           I+D+++GK L TL GH+  +    F   S L+V+ S    + I DV+      TL  H+ 
Sbjct: 174 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 233

Query: 717 PRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLID 833
             L+ +  P               +WD     C+    D
Sbjct: 234 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD 272



 Score = 55.5 bits (132), Expect = 8e-08
 Identities = 40/145 (27%), Positives = 64/145 (44%)
 Frame = +3

Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488
           L+++L GH   V S   +      ASSS    I  W   + K  K++    +    +A S
Sbjct: 56  LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFS 115

Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668
            DS  L + +    +NI+ V SGK   +L+    ++    +      + SG+    + I 
Sbjct: 116 PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175

Query: 669 DVKTGKCLTTLLAHSDPRLSRSL*P 743
           D+ TGK L TL  H+ P  S +  P
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSP 200


>ref|NP_078808.3| sperm associated antigen 16 isoform 1 [Homo sapiens]
          Length = 631

 Score = 75.5 bits (184), Expect = 8e-14
 Identities = 44/128 (34%), Positives = 63/128 (49%)
 Frame = +3

Query: 327 GHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLL 506
           GHT  +S   F P+G+ LA+SS    +  W         T  G S  +      S  N +
Sbjct: 392 GHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFV 451

Query: 507 VSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGK 686
            S+S DKT  IWDV+S +C  TL GH+  V    F   SN +++ S  +++ I D +TG 
Sbjct: 452 ASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGI 511

Query: 687 CLTTLLAH 710
           C  +L  H
Sbjct: 512 CEQSLYGH 519



 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 47/172 (27%), Positives = 71/172 (41%)
 Frame = +3

Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509
           H   VS     P+ + L S    +L    G        T  G +  +SD       + L 
Sbjct: 351 HELPVSCVSMQPHKDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKLA 410

Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKC 689
           ++S D T+ +WD+  G C++T  GHS  V+ C +H   N + S S  ++  I DV + +C
Sbjct: 411 TSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERC 470

Query: 690 LTTLLAHSDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLIDDYNS 845
             TL  H+D   S    P               IWD   G C ++L    +S
Sbjct: 471 RCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSLYGHMHS 522



 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 36/107 (33%), Positives = 56/107 (52%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           T  GH++AV S  +   G ++ASSS  K    W     +   TL G +  ++ +     S
Sbjct: 431 TFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFS 490

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVS 638
           N L+++S DKTL+IWD  +G C  +L GH H +    F  + ++I S
Sbjct: 491 NTLLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHMIAS 537


>ref|NP_056241.2| WD repeat domain 51A [Homo sapiens]
          Length = 407

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 41/128 (32%), Positives = 63/128 (49%)
 Frame = +3

Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509
           HT  V S  F  +G+   ++S  K +  W  + +KF  +LS     +     S D  L+V
Sbjct: 102 HTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIV 161

Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKC 689
           SASDDKT+ +WD SS +C+ +   H  +V   +FH     I +     +V + DV+T + 
Sbjct: 162 SASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTYRL 221

Query: 690 LTTLLAHS 713
           L     HS
Sbjct: 222 LQHYQLHS 229



 Score = 73.2 bits (178), Expect = 4e-13
 Identities = 40/132 (30%), Positives = 62/132 (46%)
 Frame = +3

Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494
           +   GH  AV+   F+P+G  LAS S  K +  W    +         +  +  V   SD
Sbjct: 55  YRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSD 114

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674
               V+ASDDKT+ +W     K L +L+ H ++V C  F     LIVS S  ++V + D 
Sbjct: 115 GQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 174

Query: 675 KTGKCLTTLLAH 710
            + +C+ +   H
Sbjct: 175 SSRECVHSYCEH 186



 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 38/135 (28%), Positives = 63/135 (46%)
 Frame = +3

Query: 315 FTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSD 494
           F+L+ H   V  AKF+P+G  + S+S  K +  W    R+   +       ++ V     
Sbjct: 139 FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPS 198

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDV 674
              + +A  D T+ +WDV + + L     HS  V   +FH   N +++ S   ++ ILD+
Sbjct: 199 GTCIAAAGMDNTVKVWDVRTYRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDL 258

Query: 675 KTGKCLTTLLAHSDP 719
             G+ L TL  H  P
Sbjct: 259 MEGRLLYTLHGHQGP 273



 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 29/112 (25%), Positives = 47/112 (41%)
 Frame = +3

Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509
           H   V+   F P+G  +A++     +  W     +  +     S  ++ ++     N L+
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTYRLLQHYQLHSAAVNGLSFHPSGNYLI 245

Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMI 665
           +AS D TL I D+  G+ L TL+GH        F        SG   E VM+
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297


>ref|XP_934992.1| PREDICTED: similar to CG7704-PA isoform 1 [Homo sapiens]
          Length = 315

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 42/129 (32%), Positives = 65/129 (50%)
 Frame = +3

Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509
           H   V+S+ F+P+G+ L + S    +  W     +    L G +  +     S D +L  
Sbjct: 20  HGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFA 79

Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKC 689
           SAS D T+ +WDV+  KCL  L GH   V   +F   S  + SG + + VM+ DV++G+ 
Sbjct: 80  SASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQM 139

Query: 690 LTTLLAHSD 716
           L  L+ H D
Sbjct: 140 LRLLVGHRD 148



 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 40/123 (32%), Positives = 60/123 (48%)
 Frame = +3

Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488
           L + L GHT  V   +F+P+G   AS+S    +  W     K  + L G    +  V+ S
Sbjct: 55  LLWRLGGHTGPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFS 114

Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668
            DS  L S   DK + +WDV SG+ L  L GH   +   +F    N + +GS+  +V I 
Sbjct: 115 PDSRQLASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIW 174

Query: 669 DVK 677
           D++
Sbjct: 175 DLR 177



 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 44/130 (33%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
 Frame = +3

Query: 321 LAGHTKAVSSAKFTPNGEWLASSSAHKLINTWG---AYHRKFEKTLSGPSLGISDVACSS 491
           L GH  ++ S+ F+P    LA+ S    ++ W           + L G S  IS + C S
Sbjct: 143 LVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQALEGHSANISCL-CYS 201

Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671
            S LL S S DKT++IW  ++   LI L GH  +V    F      + S  +   V + D
Sbjct: 202 ASGLLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWD 261

Query: 672 VKTGKCLTTL 701
             TGKCL TL
Sbjct: 262 CNTGKCLETL 271


>ref|XP_947007.1| PREDICTED: similar to CG7704-PA isoform 1 [Homo sapiens]
          Length = 315

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 42/129 (32%), Positives = 65/129 (50%)
 Frame = +3

Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509
           H   V+S+ F+P+G+ L + S    +  W     +    L G +  +     S D +L  
Sbjct: 20  HGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFA 79

Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKC 689
           SAS D T+ +WDV+  KCL  L GH   V   +F   S  + SG + + VM+ DV++G+ 
Sbjct: 80  SASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQM 139

Query: 690 LTTLLAHSD 716
           L  L+ H D
Sbjct: 140 LRLLVGHRD 148



 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 40/123 (32%), Positives = 60/123 (48%)
 Frame = +3

Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488
           L + L GHT  V   +F+P+G   AS+S    +  W     K  + L G    +  V+ S
Sbjct: 55  LLWRLGGHTGPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFS 114

Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668
            DS  L S   DK + +WDV SG+ L  L GH   +   +F    N + +GS+  +V I 
Sbjct: 115 PDSRQLASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVRIW 174

Query: 669 DVK 677
           D++
Sbjct: 175 DLR 177



 Score = 66.2 bits (160), Expect = 5e-11
 Identities = 44/130 (33%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
 Frame = +3

Query: 321 LAGHTKAVSSAKFTPNGEWLASSSAHKLINTWG---AYHRKFEKTLSGPSLGISDVACSS 491
           L GH  ++ S+ F+P    LA+ S    +  W           + L G S  IS + C S
Sbjct: 143 LVGHRDSIQSSDFSPTVNCLATGSWDSTVRIWDLRMVTPAVSHQALEGHSGNISCL-CYS 201

Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671
            S LL S S DKT++IW  ++   LI L GH  +V    F      + S  +   V + D
Sbjct: 202 ASGLLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWD 261

Query: 672 VKTGKCLTTL 701
             TGKCL TL
Sbjct: 262 CNTGKCLETL 271


  Database: RefSeqHP
    Posted date:  Aug 2, 2006 12:57 AM
  Number of letters in database: 17,774,539
  Number of sequences in database:  39,411
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,530,800
Number of Sequences: 39411
Number of extensions: 1031113
Number of successful extensions: 5356
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 3797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5091
length of database: 17,774,539
effective HSP length: 103
effective length of database: 13,715,206
effective search space used: 3675675208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqMP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-020080
         (1115 letters)

Database: RefSeqMP 
           45,328 sequences; 21,768,885 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_543124.1| WD repeat domain 5 [Mus musculus]                    266   3e-71
Alignment   gi|NP_081389.1| WD repeat domain 5B [Mus musculus]                   216   5e-56
Alignment   gi|NP_038653.1| platelet-activating factor acetylhydrolase, iso...    80   5e-15
Alignment   gi|NP_080004.1| sperm associated antigen 16 isoform 2 [Mus musc...    79   1e-14
Alignment   gi|NP_083436.2| sperm associated antigen 16 isoform 1 [Mus musc...    79   1e-14
Alignment   gi|NP_082001.1| hypothetical protein LOC71227 [Mus musculus]          78   1e-14
Alignment   gi|XP_987745.1| PREDICTED: similar to platelet-activating facto...    77   3e-14
Alignment   gi|NP_001020547.1| WD repeat domain 61 isoform b [Mus musculus]       77   3e-14
Alignment   gi|NP_001020546.1| WD repeat domain 61 isoform a [Mus musculus]       77   3e-14
Alignment   gi|NP_075680.1| WD repeat domain 61 isoform a [Mus musculus]          77   3e-14

>ref|NP_543124.1| WD repeat domain 5 [Mus musculus]
          Length = 334

 Score =  266 bits (680), Expect = 3e-71
 Identities = 162/294 (55%), Positives = 178/294 (60%)
 Frame = +3

Query: 201  MATAENKXXXXXXXXXXXXXXXXXXSKXXXXXXXXXLKFTLAGHTKAVSSAKFTPNGEWL 380
            MAT E K                  SK         LKFTLAGHTKAVSS KF+PNGEWL
Sbjct: 1    MATEEKKPETEAARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWL 60

Query: 381  ASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDVSSGK 560
            ASSSA KLI  WGAY  KFEKT+SG  LGISDVA SSDSNLLVSASDDKTL IWDVSSGK
Sbjct: 61   ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 120

Query: 561  CLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSDPRLSRSL* 740
            CL TL GHS+YVFCCNF+ QSNLIVSGSF ESV I DVKTGKCL TL AHSDP  +    
Sbjct: 121  CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180

Query: 741  PGRFPDCFKRYHGLCWIWDTPFGPCLKNLIDDYNSPLVLRKILSQRQVLFVPYP*KHP*T 920
                      Y GLC IWDT  G CLK LIDD N P+   K  S      +     +   
Sbjct: 181  RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK-FSPNGKYILAATLDNTLK 239

Query: 921  SLNYPKENVLKKVTGPPKLKKNCEFSKFSFVPGRGK*MLFGLQKKLPFFYFLYT 1082
              +Y K   LK  TG  K +K C F+ FS V G GK ++ G +  L + + L T
Sbjct: 240  LWDYSKGKCLKTYTG-HKNEKYCIFANFS-VTG-GKWIVSGSEDNLVYIWNLQT 290



 Score = 69.3 bits (168), Expect = 7e-12
 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTL-SGPSLGISDVACSSD 494
           TL  H+  VS+  F  +G  + SSS   L   W     +  KTL    +  +S V  S +
Sbjct: 166 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPN 225

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFC--CNFHLQSNL-IVSGSFHESVMI 665
              +++A+ D TL +WD S GKCL T  GH +  +C   NF +     IVSGS    V I
Sbjct: 226 GKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285

Query: 666 LDVKTGKCLTTLLAHSDPRLSRSL*P 743
            +++T + +  L  H+D  +S +  P
Sbjct: 286 WNLQTKEIVQKLQGHTDVVISTACHP 311


>ref|NP_081389.1| WD repeat domain 5B [Mus musculus]
          Length = 328

 Score =  216 bits (549), Expect = 5e-56
 Identities = 130/258 (50%), Positives = 160/258 (62%)
 Frame = +3

Query: 309  LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488
            L+ TLAGH+ A+SS KF+PNGEWLASS+A  LI  WGAY    +KTL G SL ISDVA S
Sbjct: 31   LRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWS 90

Query: 489  SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668
            SDS+ LVSASDDKTL +WD+ SGKCL TL GHS +VFCC+F+  SNLIVSGSF ESV I 
Sbjct: 91   SDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIW 150

Query: 669  DVKTGKCLTTLLAHSDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLIDDYNSP 848
            +VKTGKCL TL AHSDP  + +            Y GLC IWD   G CL+ L D+ N P
Sbjct: 151  EVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPP 210

Query: 849  LVLRKILSQRQVLFVPYP*KHP*TSLNYPKENVLKKVTGPPKLKKNCEFSKFSFVPGRGK 1028
            +   K  S      +     +     +Y +   LK  TG  K +K C F+ FS V GR K
Sbjct: 211  VSFVK-FSPNGKYILTATLDNTLKLWDYSRGRCLKTYTG-HKNEKYCLFASFS-VTGR-K 266

Query: 1029 *MLFGLQKKLPFFYFLYT 1082
             ++ G +  + + + L T
Sbjct: 267  WVVSGSEDNMVYIWNLQT 284



 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGP-SLGISDVACSSD 494
           TL+ H+  +S+  F  NG  + S S   L   W A   +  +TL+   +  +S V  S +
Sbjct: 160 TLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPN 219

Query: 495 SNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFC--CNFHLQSNL-IVSGSFHESVMI 665
              +++A+ D TL +WD S G+CL T  GH +  +C   +F +     +VSGS    V I
Sbjct: 220 GKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYI 279

Query: 666 LDVKTGKCLTTLLAHSDPRLSRSL*P 743
            +++T + +  L  H+D  +S +  P
Sbjct: 280 WNLQTKEIVQRLQGHTDVVISAACHP 305


>ref|NP_038653.1| platelet-activating factor acetylhydrolase, isoform 1b, beta1
           subunit [Mus musculus]
          Length = 410

 Score = 79.7 bits (195), Expect = 5e-15
 Identities = 41/135 (30%), Positives = 66/135 (48%)
 Frame = +3

Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491
           K+ L+GH   V+   F P    + S+S    I  W      FE+TL G +  + D++   
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160

Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671
              LL S S D T+ +WD    +C+ T++GH H V         + IVS S  +++ + +
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220

Query: 672 VKTGKCLTTLLAHSD 716
           V+TG C+ T   H +
Sbjct: 221 VQTGYCVKTFTGHRE 235



 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 45/131 (34%), Positives = 66/131 (50%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           TL GHT +V    F  +G+ LAS SA   I  W     +  +T+ G    +S VA   + 
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
           + +VSAS DKT+ +W+V +G C+ T  GH  +V     +    LI S S  ++V +  V 
Sbjct: 205 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264

Query: 678 TGKCLTTLLAH 710
           T +C   L  H
Sbjct: 265 TKECKAELREH 275



 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           T+ GH   VSS    PNG+ + S+S  K I  W        KT +G    +  V  + D 
Sbjct: 187 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 246

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSN----------------- 626
            L+ S S+D+T+ +W V++ +C   L  H H V C ++  +S+                 
Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGK 306

Query: 627 ---LIVSGSFHESVMILDVKTGKCLTTLLAHSD 716
               ++SGS  +++ + DV TG CL TL+ H +
Sbjct: 307 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339



 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 33/103 (32%), Positives = 52/103 (50%)
 Frame = +3

Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548
           G +L S S  K I  W         TL G    +  V   S    ++S +DDKTL +WD 
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367

Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
            + +C+ TLN H H+V   +FH  +  +V+GS  ++V + + +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410


>ref|NP_080004.1| sperm associated antigen 16 isoform 2 [Mus musculus]
          Length = 310

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 45/131 (34%), Positives = 67/131 (51%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           T +GHT  +S   F P+G  LA+SS    I  W     +   TL G +  +      S  
Sbjct: 68  TGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCG 127

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
           + + SAS D T  IWDV+S +C  TL GH+  V    F   SN++++ S  +++ + D +
Sbjct: 128 DFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDAR 187

Query: 678 TGKCLTTLLAH 710
           TGKC  +L  H
Sbjct: 188 TGKCEQSLYGH 198



 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 47/172 (27%), Positives = 74/172 (43%)
 Frame = +3

Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509
           H   VS     P  ++L S S  +L    G        T SG +  +S        + L 
Sbjct: 30  HELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLA 89

Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKC 689
           ++S D T+ +WD++ G+C +TL GH+H V+ C +H   + + S S   +  I DV + +C
Sbjct: 90  TSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERC 149

Query: 690 LTTLLAHSDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLIDDYNS 845
             TL  H+D   S    P               +WD   G C ++L    +S
Sbjct: 150 RYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHS 201



 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 37/107 (34%), Positives = 57/107 (53%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           TL GH  AV S  +   G+++AS+S       W     +   TL G +  ++ +     S
Sbjct: 110 TLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFS 169

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVS 638
           N+L++AS DKTL++WD  +GKC  +L GH H V    F  + ++I S
Sbjct: 170 NILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHIIAS 216



 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 30/125 (24%), Positives = 61/125 (48%)
 Frame = +3

Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491
           ++TL GHT +V+S +F P    L ++SA K ++ W A   K E++L G    ++D   + 
Sbjct: 150 RYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTP 209

Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671
             +++ S        +WD      +++++         NF     ++   S +  + +LD
Sbjct: 210 RGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQSGRVLAQASANGIIHLLD 269

Query: 672 VKTGK 686
           +K+G+
Sbjct: 270 LKSGQ 274


>ref|NP_083436.2| sperm associated antigen 16 isoform 1 [Mus musculus]
          Length = 639

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 45/131 (34%), Positives = 67/131 (51%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           T +GHT  +S   F P+G  LA+SS    I  W     +   TL G +  +      S  
Sbjct: 397 TGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCG 456

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
           + + SAS D T  IWDV+S +C  TL GH+  V    F   SN++++ S  +++ + D +
Sbjct: 457 DFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDAR 516

Query: 678 TGKCLTTLLAH 710
           TGKC  +L  H
Sbjct: 517 TGKCEQSLYGH 527



 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 47/172 (27%), Positives = 74/172 (43%)
 Frame = +3

Query: 330 HTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLV 509
           H   VS     P  ++L S S  +L    G        T SG +  +S        + L 
Sbjct: 359 HELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLA 418

Query: 510 SASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKC 689
           ++S D T+ +WD++ G+C +TL GH+H V+ C +H   + + S S   +  I DV + +C
Sbjct: 419 TSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERC 478

Query: 690 LTTLLAHSDPRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLIDDYNS 845
             TL  H+D   S    P               +WD   G C ++L    +S
Sbjct: 479 RYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHS 530



 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 37/107 (34%), Positives = 57/107 (53%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           TL GH  AV S  +   G+++AS+S       W     +   TL G +  ++ +     S
Sbjct: 439 TLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFS 498

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVS 638
           N+L++AS DKTL++WD  +GKC  +L GH H V    F  + ++I S
Sbjct: 499 NILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHIIAS 545



 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 30/125 (24%), Positives = 61/125 (48%)
 Frame = +3

Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491
           ++TL GHT +V+S +F P    L ++SA K ++ W A   K E++L G    ++D   + 
Sbjct: 479 RYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTP 538

Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671
             +++ S        +WD      +++++         NF     ++   S +  + +LD
Sbjct: 539 RGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQSGRVLAQASANGIIHLLD 598

Query: 672 VKTGK 686
           +K+G+
Sbjct: 599 LKSGQ 603


>ref|NP_082001.1| hypothetical protein LOC71227 [Mus musculus]
          Length = 310

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 40/116 (34%), Positives = 62/116 (53%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           TL GH   +  + F   G+ +A++SA      + A  RK    L G    IS ++ +   
Sbjct: 193 TLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCVTKLEGHEGEISKISFNPQG 252

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMI 665
           N L++ S DKT  IWDV +G+CL  L GH+  +F C F+ + N++++GS   S  I
Sbjct: 253 NRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRI 308



 Score = 76.6 bits (187), Expect = 4e-14
 Identities = 43/133 (32%), Positives = 68/133 (51%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           TL GH   +SSA F  +   + + S  K    W A   K+  TL+G    I D       
Sbjct: 151 TLIGHCAEISSALFNWDCSLILTGSMDKTCMLWDATSGKYVATLTGHDDEILDSCFDYTG 210

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
            L+ +AS D T  +++ ++ KC+  L GH   +   +F+ Q N +++GS  ++  I DV+
Sbjct: 211 KLIATASADGTARVYNATTRKCVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQ 270

Query: 678 TGKCLTTLLAHSD 716
           TG+CL  L  H+D
Sbjct: 271 TGQCLQVLEGHTD 283



 Score = 52.8 bits (125), Expect = 7e-07
 Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 22/114 (19%)
 Frame = +3

Query: 441 KTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVF------- 599
           K L    L +++VA +   +  ++ S D+T  +WD +SG+ L TL GH + V+       
Sbjct: 86  KVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHKNVVYAIAFNNP 145

Query: 600 ----------CCN-----FHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSD 716
                     C       F+   +LI++GS  ++ M+ D  +GK + TL  H D
Sbjct: 146 YGKVHTLIGHCAEISSALFNWDCSLILTGSMDKTCMLWDATSGKYVATLTGHDD 199


>ref|XP_987745.1| PREDICTED: similar to platelet-activating factor acetylhydrolase
           beta subunit [Mus musculus]
          Length = 312

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 45/131 (34%), Positives = 66/131 (50%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           TL GHT +V    F  +G+ LAS SA   I  W     +  +T+ G    +S VA   + 
Sbjct: 47  TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 106

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
           + +VSAS DKT+ +W+V +G C+ T  GH  +V     +    LI S S  ++V +  V 
Sbjct: 107 DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 166

Query: 678 TGKCLTTLLAH 710
           T +C   L  H
Sbjct: 167 TKECKAELREH 177



 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 20/153 (13%)
 Frame = +3

Query: 318 TLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDS 497
           T+ GH   VSS    PNG+ + S+S  K I  W        KT +G    +  V  + D 
Sbjct: 89  TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG 148

Query: 498 NLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSN----------------- 626
            L+ S S+D+T+ +W V++ +C   L  H H V C ++  +S+                 
Sbjct: 149 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGK 208

Query: 627 ---LIVSGSFHESVMILDVKTGKCLTTLLAHSD 716
               ++SGS  +++ + DV TG CL TL+ H +
Sbjct: 209 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 241



 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 33/103 (32%), Positives = 52/103 (50%)
 Frame = +3

Query: 369 GEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDV 548
           G +L S S  K I  W         TL G    +  V   S    ++S +DDKTL +WD 
Sbjct: 210 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 269

Query: 549 SSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVK 677
            + +C+ TLN H H+V   +FH  +  +V+GS  ++V + + +
Sbjct: 270 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 312



 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 32/105 (30%), Positives = 53/105 (50%)
 Frame = +3

Query: 402 LINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLNIWDVSSGKCLITLNG 581
           L + W      FE+TL G +  + D++      LL S S D T+ +WD    +C+ T++G
Sbjct: 33  LHSVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG 92

Query: 582 HSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSD 716
           H H V         + IVS S  +++ + +V+TG C+ T   H +
Sbjct: 93  HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 137


>ref|NP_001020547.1| WD repeat domain 61 isoform b [Mus musculus]
          Length = 207

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 46/135 (34%), Positives = 70/135 (51%)
 Frame = +3

Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491
           +++L    K + S  ++P+G++LAS +   +IN +     K   TL G ++ I  +  S 
Sbjct: 43  EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 102

Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671
           DS LLV+ASDD  + I+DV       TL+GH+ +V    F       VS S  +SV + D
Sbjct: 103 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 162

Query: 672 VKTGKCLTTLLAHSD 716
           V T  C+ T   H D
Sbjct: 163 VGTRTCIHTFFDHQD 177



 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 35/121 (28%), Positives = 58/121 (47%)
 Frame = +3

Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488
           L  TL GH   + S  F+P+ + L ++S    I  +   H     TLSG +  + +VA  
Sbjct: 84  LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 143

Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668
            D    VS+S DK++ +WDV +  C+ T   H   V+   ++   + IVS    + + + 
Sbjct: 144 PDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 203

Query: 669 D 671
           D
Sbjct: 204 D 204



 Score = 62.4 bits (150), Expect = 8e-10
 Identities = 43/159 (27%), Positives = 70/159 (44%)
 Frame = +3

Query: 357 FTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLN 536
           F+P+ ++LA+ +    +N +G    K E +L      I  +A S D   L S + D  +N
Sbjct: 16  FSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 75

Query: 537 IWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSD 716
           I+D+++GK L TL GH+  +    F   S L+V+ S    + I DV+      TL  H+ 
Sbjct: 76  IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 135

Query: 717 PRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLID 833
             L+ +  P               +WD     C+    D
Sbjct: 136 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFD 174


>ref|NP_001020546.1| WD repeat domain 61 isoform a [Mus musculus]
          Length = 305

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 46/135 (34%), Positives = 70/135 (51%)
 Frame = +3

Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491
           +++L    K + S  ++P+G++LAS +   +IN +     K   TL G ++ I  +  S 
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200

Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671
           DS LLV+ASDD  + I+DV       TL+GH+ +V    F       VS S  +SV + D
Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260

Query: 672 VKTGKCLTTLLAHSD 716
           V T  C+ T   H D
Sbjct: 261 VGTRTCIHTFFDHQD 275



 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 35/121 (28%), Positives = 58/121 (47%)
 Frame = +3

Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488
           L  TL GH   + S  F+P+ + L ++S    I  +   H     TLSG +  + +VA  
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241

Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668
            D    VS+S DK++ +WDV +  C+ T   H   V+   ++   + IVS    + + + 
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301

Query: 669 D 671
           D
Sbjct: 302 D 302



 Score = 62.4 bits (150), Expect = 8e-10
 Identities = 43/159 (27%), Positives = 70/159 (44%)
 Frame = +3

Query: 357 FTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLN 536
           F+P+ ++LA+ +    +N +G    K E +L      I  +A S D   L S + D  +N
Sbjct: 114 FSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 173

Query: 537 IWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSD 716
           I+D+++GK L TL GH+  +    F   S L+V+ S    + I DV+      TL  H+ 
Sbjct: 174 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 233

Query: 717 PRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLID 833
             L+ +  P               +WD     C+    D
Sbjct: 234 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFD 272



 Score = 55.8 bits (133), Expect = 8e-08
 Identities = 40/145 (27%), Positives = 64/145 (44%)
 Frame = +3

Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488
           L+++L GH   V S   +      ASSS    I  W   + K  K++    +    +A S
Sbjct: 56  LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFS 115

Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668
            DS  L + +    +NI+ V SGK   +L+    ++    +      + SG+    + I 
Sbjct: 116 PDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175

Query: 669 DVKTGKCLTTLLAHSDPRLSRSL*P 743
           D+ TGK L TL  H+ P  S +  P
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSP 200


>ref|NP_075680.1| WD repeat domain 61 isoform a [Mus musculus]
          Length = 305

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 46/135 (34%), Positives = 70/135 (51%)
 Frame = +3

Query: 312 KFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSS 491
           +++L    K + S  ++P+G++LAS +   +IN +     K   TL G ++ I  +  S 
Sbjct: 141 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200

Query: 492 DSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILD 671
           DS LLV+ASDD  + I+DV       TL+GH+ +V    F       VS S  +SV + D
Sbjct: 201 DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260

Query: 672 VKTGKCLTTLLAHSD 716
           V T  C+ T   H D
Sbjct: 261 VGTRTCIHTFFDHQD 275



 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 35/121 (28%), Positives = 58/121 (47%)
 Frame = +3

Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488
           L  TL GH   + S  F+P+ + L ++S    I  +   H     TLSG +  + +VA  
Sbjct: 182 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 241

Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668
            D    VS+S DK++ +WDV +  C+ T   H   V+   ++   + IVS    + + + 
Sbjct: 242 PDDTHFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301

Query: 669 D 671
           D
Sbjct: 302 D 302



 Score = 62.4 bits (150), Expect = 8e-10
 Identities = 43/159 (27%), Positives = 70/159 (44%)
 Frame = +3

Query: 357 FTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACSSDSNLLVSASDDKTLN 536
           F+P+ ++LA+ +    +N +G    K E +L      I  +A S D   L S + D  +N
Sbjct: 114 FSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 173

Query: 537 IWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMILDVKTGKCLTTLLAHSD 716
           I+D+++GK L TL GH+  +    F   S L+V+ S    + I DV+      TL  H+ 
Sbjct: 174 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 233

Query: 717 PRLSRSL*PGRFPDCFKRYHGLCWIWDTPFGPCLKNLID 833
             L+ +  P               +WD     C+    D
Sbjct: 234 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCIHTFFD 272



 Score = 55.8 bits (133), Expect = 8e-08
 Identities = 40/145 (27%), Positives = 64/145 (44%)
 Frame = +3

Query: 309 LKFTLAGHTKAVSSAKFTPNGEWLASSSAHKLINTWGAYHRKFEKTLSGPSLGISDVACS 488
           L+++L GH   V S   +      ASSS    I  W   + K  K++    +    +A S
Sbjct: 56  LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFS 115

Query: 489 SDSNLLVSASDDKTLNIWDVSSGKCLITLNGHSHYVFCCNFHLQSNLIVSGSFHESVMIL 668
            DS  L + +    +NI+ V SGK   +L+    ++    +      + SG+    + I 
Sbjct: 116 PDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175

Query: 669 DVKTGKCLTTLLAHSDPRLSRSL*P 743
           D+ TGK L TL  H+ P  S +  P
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSP 200


  Database: RefSeqMP
    Posted date:  Aug 2, 2006 12:58 AM
  Number of letters in database: 21,768,885
  Number of sequences in database:  45,328
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,695,901
Number of Sequences: 45328
Number of extensions: 1173012
Number of successful extensions: 5440
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 4015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5235
length of database: 21,768,885
effective HSP length: 105
effective length of database: 17,009,445
effective search space used: 4524512370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)