BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-022153
(779 letters)
Database: RefSeqSP
1040 sequences; 434,620 total letters
Searching...done
***** No hits found ******
Database: RefSeqSP
Posted date: Aug 1, 2006 7:14 PM
Number of letters in database: 434,620
Number of sequences in database: 1040
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 742,612
Number of Sequences: 1040
Number of extensions: 19207
Number of successful extensions: 66
Number of sequences better than 1.0e-05: 0
Number of HSP's better than 0.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 434,620
effective HSP length: 75
effective length of database: 356,620
effective search space used: 65618080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqBP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-022153
(779 letters)
Database: RefSeqBP
33,508 sequences; 16,112,626 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_879336.1| PREDICTED: similar to guanosine monophosphate r... 66 1e-20
Alignment gi|NP_001033208.1| hypothetical protein LOC515837 [Bos taurus] 84 1e-16
Alignment gi|XP_879420.1| PREDICTED: similar to guanosine monophosphate r... 65 6e-11
Alignment gi|XP_879245.1| PREDICTED: similar to guanosine monophosphate r... 65 6e-11
Alignment gi|XP_612247.2| PREDICTED: similar to guanosine monophosphate r... 65 6e-11
>ref|XP_879336.1| PREDICTED: similar to guanosine monophosphate reductase isoform 3
[Bos taurus]
Length = 350
Score = 66.2 bits (160), Expect(2) = 1e-20
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = +2
Query: 335 KCSVSCSYLQVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVL 478
K QVDL R+F+FRNSKQ Y+GIPII ANMDTVGTFEMA V+
Sbjct: 25 KSRAEAGVAQVDLERTFTFRNSKQTYSGIPIIVANMDTVGTFEMAVVM 72
Score = 51.6 bits (122), Expect(2) = 1e-20
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSE 218
MP ID D+KLDFKDVLLRPKRS+LKSR+E
Sbjct: 1 MPRIDADLKLDFKDVLLRPKRSSLKSRAE 29
>ref|NP_001033208.1| hypothetical protein LOC515837 [Bos taurus]
Length = 348
Score = 84.0 bits (206), Expect = 1e-16
Identities = 43/53 (81%), Positives = 45/53 (84%)
Frame = +2
Query: 335 KCSVSCSYLQVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVLCKVGL 493
K S S +VDLTRSF+FRNSKQMYTGIPIIAANMDTVGTFEMAKVLCK L
Sbjct: 20 KRSTLKSRSEVDLTRSFAFRNSKQMYTGIPIIAANMDTVGTFEMAKVLCKFSL 72
Score = 63.2 bits (152), Expect = 2e-10
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV
Sbjct: 1 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 30
>ref|XP_879420.1| PREDICTED: similar to guanosine monophosphate reductase isoform 4
[Bos taurus]
Length = 400
Score = 65.1 bits (157), Expect = 6e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +2
Query: 353 SYLQVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVL 478
S +VDL R+F+FRNSKQ Y+GIPII ANMDTVGTFEMA V+
Sbjct: 26 SRAEVDLERTFTFRNSKQTYSGIPIIVANMDTVGTFEMAVVM 67
Score = 53.1 bits (126), Expect = 2e-07
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
MP ID D+KLDFKDVLLRPKRS+LKSR+EV
Sbjct: 1 MPRIDADLKLDFKDVLLRPKRSSLKSRAEV 30
>ref|XP_879245.1| PREDICTED: similar to guanosine monophosphate reductase isoform 2
[Bos taurus]
Length = 349
Score = 65.1 bits (157), Expect = 6e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +2
Query: 353 SYLQVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVL 478
S +VDL R+F+FRNSKQ Y+GIPII ANMDTVGTFEMA V+
Sbjct: 26 SRAEVDLERTFTFRNSKQTYSGIPIIVANMDTVGTFEMAVVM 67
Score = 53.1 bits (126), Expect = 2e-07
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
MP ID D+KLDFKDVLLRPKRS+LKSR+EV
Sbjct: 1 MPRIDADLKLDFKDVLLRPKRSSLKSRAEV 30
>ref|XP_612247.2| PREDICTED: similar to guanosine monophosphate reductase isoform 1
[Bos taurus]
Length = 345
Score = 65.1 bits (157), Expect = 6e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +2
Query: 353 SYLQVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVL 478
S +VDL R+F+FRNSKQ Y+GIPII ANMDTVGTFEMA V+
Sbjct: 26 SRAEVDLERTFTFRNSKQTYSGIPIIVANMDTVGTFEMAVVM 67
Score = 53.1 bits (126), Expect = 2e-07
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
MP ID D+KLDFKDVLLRPKRS+LKSR+EV
Sbjct: 1 MPRIDADLKLDFKDVLLRPKRSSLKSRAEV 30
Database: RefSeqBP
Posted date: Aug 1, 2006 7:14 PM
Number of letters in database: 16,112,626
Number of sequences in database: 33,508
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,357,942
Number of Sequences: 33508
Number of extensions: 718709
Number of successful extensions: 2353
Number of sequences better than 1.0e-05: 5
Number of HSP's better than 0.0 without gapping: 2102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2352
length of database: 16,112,626
effective HSP length: 99
effective length of database: 12,795,334
effective search space used: 2047253440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqHP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-022153
(779 letters)
Database: RefSeqHP
39,411 sequences; 17,774,539 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001002001.1| guanosine monophosphate reductase 2 isoform ... 81 1e-15
Alignment gi|NP_001002000.1| guanosine monophosphate reductase 2 isoform ... 81 1e-15
Alignment gi|NP_057660.2| guanosine monophosphate reductase 2 isoform 1 [... 81 1e-15
Alignment gi|NP_001002002.1| guanosine monophosphate reductase 2 isoform ... 81 1e-15
Alignment gi|NP_006868.2| guanosine monophosphate reductase [Homo sapiens] 65 5e-11
>ref|NP_001002001.1| guanosine monophosphate reductase 2 isoform 2 [Homo sapiens]
Length = 348
Score = 80.9 bits (198), Expect = 1e-15
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = +2
Query: 335 KCSVSCSYLQVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVLCKVGL 493
K S S +VDLTRSFSFRNSKQ Y+G+PIIAANMDTVGTFEMAKVLCK L
Sbjct: 20 KRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSL 72
Score = 63.2 bits (152), Expect = 2e-10
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV
Sbjct: 1 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 30
>ref|NP_001002000.1| guanosine monophosphate reductase 2 isoform 2 [Homo sapiens]
Length = 348
Score = 80.9 bits (198), Expect = 1e-15
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = +2
Query: 335 KCSVSCSYLQVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVLCKVGL 493
K S S +VDLTRSFSFRNSKQ Y+G+PIIAANMDTVGTFEMAKVLCK L
Sbjct: 20 KRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSL 72
Score = 63.2 bits (152), Expect = 2e-10
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV
Sbjct: 1 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 30
>ref|NP_057660.2| guanosine monophosphate reductase 2 isoform 1 [Homo sapiens]
Length = 366
Score = 80.9 bits (198), Expect = 1e-15
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = +2
Query: 335 KCSVSCSYLQVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVLCKVGL 493
K S S +VDLTRSFSFRNSKQ Y+G+PIIAANMDTVGTFEMAKVLCK L
Sbjct: 38 KRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSL 90
Score = 67.4 bits (163), Expect = 1e-11
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = +3
Query: 117 PEVPAMPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
P + AMPHIDNDVKLDFKDVLLRPKRSTLKSRSEV
Sbjct: 14 PRLSAMPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 48
>ref|NP_001002002.1| guanosine monophosphate reductase 2 isoform 2 [Homo sapiens]
Length = 348
Score = 80.9 bits (198), Expect = 1e-15
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = +2
Query: 335 KCSVSCSYLQVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVLCKVGL 493
K S S +VDLTRSFSFRNSKQ Y+G+PIIAANMDTVGTFEMAKVLCK L
Sbjct: 20 KRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSL 72
Score = 63.2 bits (152), Expect = 2e-10
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV
Sbjct: 1 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 30
>ref|NP_006868.2| guanosine monophosphate reductase [Homo sapiens]
Length = 345
Score = 65.5 bits (158), Expect = 5e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +2
Query: 353 SYLQVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVL 478
S +VDL R+F+FRNSKQ Y+GIPII ANMDTVGTFEMA V+
Sbjct: 26 SRAEVDLERTFTFRNSKQTYSGIPIIVANMDTVGTFEMAAVM 67
Score = 53.1 bits (126), Expect = 2e-07
Identities = 25/30 (83%), Positives = 28/30 (93%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
MP ID D+KLDFKDVLLRPKRS+LKSR+EV
Sbjct: 1 MPRIDADLKLDFKDVLLRPKRSSLKSRAEV 30
Database: RefSeqHP
Posted date: Aug 2, 2006 12:57 AM
Number of letters in database: 17,774,539
Number of sequences in database: 39,411
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,887,688
Number of Sequences: 39411
Number of extensions: 829276
Number of successful extensions: 2793
Number of sequences better than 1.0e-05: 5
Number of HSP's better than 0.0 without gapping: 2415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2792
length of database: 17,774,539
effective HSP length: 100
effective length of database: 13,833,439
effective search space used: 2199516801
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqCP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-022153
(779 letters)
Database: RefSeqCP
33,732 sequences; 19,266,565 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_860631.1| PREDICTED: similar to guanosine monophosphate r... 84 1e-16
Alignment gi|XP_850127.1| PREDICTED: similar to GMP reductase 2 (Guanosin... 84 2e-16
Alignment gi|XP_860663.1| PREDICTED: similar to GMP reductase 2 (Guanosin... 84 2e-16
Alignment gi|XP_537390.2| PREDICTED: similar to GMP reductase 2 (Guanosin... 84 2e-16
Alignment gi|XP_860697.1| PREDICTED: similar to GMP reductase 2 (Guanosin... 82 4e-16
Alignment gi|XP_545353.2| PREDICTED: similar to guanosine monophosphate r... 65 7e-11
Alignment gi|XP_858369.1| PREDICTED: similar to guanosine monophosphate r... 64 2e-10
>ref|XP_860631.1| PREDICTED: similar to guanosine monophosphate reductase 2 isoform 5
[Canis familiaris]
Length = 83
Score = 84.0 bits (206), Expect = 1e-16
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = +2
Query: 335 KCSVSCSYLQVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVLCKV 487
K S S +VDLTRSFSFRNSKQ+YTGIPIIAANMDTVGTFEMAKVLCKV
Sbjct: 20 KRSTLKSRSEVDLTRSFSFRNSKQVYTGIPIIAANMDTVGTFEMAKVLCKV 70
Score = 60.8 bits (146), Expect = 1e-09
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
MPHID+D+KLDFKDVLLRPKRSTLKSRSEV
Sbjct: 1 MPHIDSDIKLDFKDVLLRPKRSTLKSRSEV 30
>ref|XP_850127.1| PREDICTED: similar to GMP reductase 2 (Guanosine 5-monophosphate
oxidoreductase 2) (Guanosine monophosphate reductase 2)
isoform 3 [Canis familiaris]
Length = 348
Score = 83.6 bits (205), Expect = 2e-16
Identities = 43/53 (81%), Positives = 45/53 (84%)
Frame = +2
Query: 335 KCSVSCSYLQVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVLCKVGL 493
K S S +VDLTRSFSFRNSKQ+YTGIPIIAANMDTVGTFEMAKVLCK L
Sbjct: 20 KRSTLKSRSEVDLTRSFSFRNSKQVYTGIPIIAANMDTVGTFEMAKVLCKFSL 72
Score = 60.8 bits (146), Expect = 1e-09
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
MPHID+D+KLDFKDVLLRPKRSTLKSRSEV
Sbjct: 1 MPHIDSDIKLDFKDVLLRPKRSTLKSRSEV 30
>ref|XP_860663.1| PREDICTED: similar to GMP reductase 2 (Guanosine 5-monophosphate
oxidoreductase 2) (Guanosine monophosphate reductase 2)
isoform 6 [Canis familiaris]
Length = 315
Score = 83.6 bits (205), Expect = 2e-16
Identities = 43/53 (81%), Positives = 45/53 (84%)
Frame = +2
Query: 335 KCSVSCSYLQVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVLCKVGL 493
K S S +VDLTRSFSFRNSKQ+YTGIPIIAANMDTVGTFEMAKVLCK L
Sbjct: 20 KRSTLKSRSEVDLTRSFSFRNSKQVYTGIPIIAANMDTVGTFEMAKVLCKFSL 72
Score = 60.8 bits (146), Expect = 1e-09
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
MPHID+D+KLDFKDVLLRPKRSTLKSRSEV
Sbjct: 1 MPHIDSDIKLDFKDVLLRPKRSTLKSRSEV 30
>ref|XP_537390.2| PREDICTED: similar to GMP reductase 2 (Guanosine 5-monophosphate
oxidoreductase 2) (Guanosine monophosphate reductase 2)
isoform 1 [Canis familiaris]
Length = 242
Score = 83.6 bits (205), Expect = 2e-16
Identities = 43/53 (81%), Positives = 45/53 (84%)
Frame = +2
Query: 335 KCSVSCSYLQVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVLCKVGL 493
K S S +VDLTRSFSFRNSKQ+YTGIPIIAANMDTVGTFEMAKVLCK L
Sbjct: 20 KRSTLKSRSEVDLTRSFSFRNSKQVYTGIPIIAANMDTVGTFEMAKVLCKFSL 72
Score = 60.8 bits (146), Expect = 1e-09
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
MPHID+D+KLDFKDVLLRPKRSTLKSRSEV
Sbjct: 1 MPHIDSDIKLDFKDVLLRPKRSTLKSRSEV 30
>ref|XP_860697.1| PREDICTED: similar to GMP reductase 2 (Guanosine 5-monophosphate
oxidoreductase 2) (Guanosine monophosphate reductase 2)
isoform 7 [Canis familiaris]
Length = 320
Score = 82.4 bits (202), Expect = 4e-16
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = +2
Query: 335 KCSVSCSYLQVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVLCK 484
K S S +VDLTRSFSFRNSKQ+YTGIPIIAANMDTVGTFEMAKVLCK
Sbjct: 20 KRSTLKSRSEVDLTRSFSFRNSKQVYTGIPIIAANMDTVGTFEMAKVLCK 69
Score = 60.8 bits (146), Expect = 1e-09
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
MPHID+D+KLDFKDVLLRPKRSTLKSRSEV
Sbjct: 1 MPHIDSDIKLDFKDVLLRPKRSTLKSRSEV 30
>ref|XP_545353.2| PREDICTED: similar to guanosine monophosphate reductase isoform 1
[Canis familiaris]
Length = 345
Score = 65.1 bits (157), Expect = 7e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +2
Query: 353 SYLQVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVL 478
S +VDL R+F+FRNSKQ Y+GIPII ANMDTVGTFEMA V+
Sbjct: 26 SRAEVDLERTFTFRNSKQTYSGIPIIVANMDTVGTFEMAVVM 67
Score = 52.0 bits (123), Expect = 6e-07
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
MP ID D+KLDFKDVLLRPKRS+L+SR+EV
Sbjct: 1 MPRIDADLKLDFKDVLLRPKRSSLRSRAEV 30
>ref|XP_858369.1| PREDICTED: similar to guanosine monophosphate reductase isoform 2
[Canis familiaris]
Length = 355
Score = 63.9 bits (154), Expect = 2e-10
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +2
Query: 365 VDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVL 478
VDL R+F+FRNSKQ Y+GIPII ANMDTVGTFEMA V+
Sbjct: 40 VDLERTFTFRNSKQTYSGIPIIVANMDTVGTFEMAVVM 77
Score = 52.0 bits (123), Expect = 6e-07
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
MP ID D+KLDFKDVLLRPKRS+L+SR+EV
Sbjct: 1 MPRIDADLKLDFKDVLLRPKRSSLRSRAEV 30
Database: RefSeqCP
Posted date: Aug 1, 2006 9:25 PM
Number of letters in database: 19,266,565
Number of sequences in database: 33,732
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,137,514
Number of Sequences: 33732
Number of extensions: 838053
Number of successful extensions: 2753
Number of sequences better than 1.0e-05: 7
Number of HSP's better than 0.0 without gapping: 2418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2752
length of database: 19,266,565
effective HSP length: 101
effective length of database: 15,859,633
effective search space used: 2505822014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
Search to RefSeqMP
BLASTX 2.2.10 [Oct-19-2004]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20060611S-022153
(779 letters)
Database: RefSeqMP
45,328 sequences; 21,768,885 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_598836.1| guanosine monophosphate reductase 2 [Mus musculus] 80 2e-15
Alignment gi|NP_818773.1| guanosine monophosphate reductase 2 [Mus musculus] 80 2e-15
Alignment gi|NP_079784.1| guanosine monophosphate reductase [Mus musculus] 65 1e-10
Alignment gi|XP_997433.1| PREDICTED: similar to guanosine monophosphate r... 65 1e-10
>ref|NP_598836.1| guanosine monophosphate reductase 2 [Mus musculus]
Length = 348
Score = 80.5 bits (197), Expect = 2e-15
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = +2
Query: 335 KCSVSCSYLQVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVLCKVGL 493
K S S +V+LTRSFSFRNSKQMY+GIP+IAANMDTVGTFEMA+VLCK L
Sbjct: 20 KRSTLKSRSEVELTRSFSFRNSKQMYSGIPVIAANMDTVGTFEMARVLCKFSL 72
Score = 63.2 bits (152), Expect = 3e-10
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV
Sbjct: 1 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 30
>ref|NP_818773.1| guanosine monophosphate reductase 2 [Mus musculus]
Length = 348
Score = 80.5 bits (197), Expect = 2e-15
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = +2
Query: 335 KCSVSCSYLQVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVLCKVGL 493
K S S +V+LTRSFSFRNSKQMY+GIP+IAANMDTVGTFEMA+VLCK L
Sbjct: 20 KRSTLKSRSEVELTRSFSFRNSKQMYSGIPVIAANMDTVGTFEMARVLCKFSL 72
Score = 63.2 bits (152), Expect = 3e-10
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV
Sbjct: 1 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 30
>ref|NP_079784.1| guanosine monophosphate reductase [Mus musculus]
Length = 345
Score = 64.7 bits (156), Expect = 1e-10
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = +2
Query: 362 QVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVL 478
+VDL R+F+FRNSKQ Y+GIPII ANMDTVGTFEMA V+
Sbjct: 29 EVDLERTFTFRNSKQTYSGIPIIVANMDTVGTFEMAVVM 67
Score = 54.3 bits (129), Expect = 1e-07
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
MP ID D+KLDFKDVLLRPKRS+LKSRSEV
Sbjct: 1 MPRIDADLKLDFKDVLLRPKRSSLKSRSEV 30
>ref|XP_997433.1| PREDICTED: similar to guanosine monophosphate reductase isoform 2
[Mus musculus]
Length = 346
Score = 64.7 bits (156), Expect = 1e-10
Identities = 30/39 (76%), Positives = 35/39 (89%)
Frame = +2
Query: 362 QVDLTRSFSFRNSKQMYTGIPIIAANMDTVGTFEMAKVL 478
+VDL R+F+FRNSKQ Y+GIPII ANMDTVGTFEMA V+
Sbjct: 29 EVDLERTFTFRNSKQTYSGIPIIVANMDTVGTFEMAVVM 67
Score = 54.3 bits (129), Expect = 1e-07
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +3
Query: 132 MPHIDNDVKLDFKDVLLRPKRSTLKSRSEV 221
MP ID D+KLDFKDVLLRPKRS+LKSRSEV
Sbjct: 1 MPRIDADLKLDFKDVLLRPKRSSLKSRSEV 30
Database: RefSeqMP
Posted date: Aug 2, 2006 12:58 AM
Number of letters in database: 21,768,885
Number of sequences in database: 45,328
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,776,262
Number of Sequences: 45328
Number of extensions: 954474
Number of successful extensions: 3114
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 2796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3113
length of database: 21,768,885
effective HSP length: 101
effective length of database: 17,190,757
effective search space used: 2716139606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)