Animal-Genome cDNA 20060611S-024864


Search to RefSeqSP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-024864
         (739 letters)

Database: RefSeqSP 
           1040 sequences; 434,620 total letters

Searching...done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_999078.1| hydroxysteroid 11-beta dehydrogenase 2 [Sus scr...    54   4e-09

>ref|NP_999078.1| hydroxysteroid 11-beta dehydrogenase 2 [Sus scrofa]
          Length = 400

 Score = 53.9 bits (128), Expect = 4e-09
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
 Frame = +2

Query: 218 VFITGCDSGFGNLLARQLDVRGLRVLAAC--LTEAGAQQLKKQTSDRLGDVLLDVTKTES 391
           V ITGCDSGFG   A++LD  G  VLA    L   GAQ+L+   S RL  + +D+TK   
Sbjct: 85  VLITGCDSGFGKATAKKLDAMGFTVLATVLELDSPGAQELRACCSPRLKLLQMDLTKPAD 144

Query: 392 NAAAHQWVEEPVREQRIWGPVHYA 463
            +   ++ +       +WG V+ A
Sbjct: 145 ISRVLEFTKVHTASTGLWGLVNNA 168


  Database: RefSeqSP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 434,620
  Number of sequences in database:  1040
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 792,489
Number of Sequences: 1040
Number of extensions: 21775
Number of successful extensions: 87
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 434,620
effective HSP length: 74
effective length of database: 357,660
effective search space used: 61159860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqBP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-024864
         (739 letters)

Database: RefSeqBP 
           33,508 sequences; 16,112,626 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001030472.1| hypothetical protein LOC533086 [Bos taurus]       169   2e-42
Alignment   gi|XP_597943.2| PREDICTED: similar to microsomal NAD+-dependent...   152   4e-42
Alignment   gi|XP_879080.1| PREDICTED: similar to microsomal NAD+-dependent...   160   7e-40
Alignment   gi|XP_878985.1| PREDICTED: similar to microsomal NAD+-dependent...   160   7e-40
Alignment   gi|XP_878888.1| PREDICTED: similar to microsomal NAD+-dependent...   160   7e-40
Alignment   gi|XP_878794.1| PREDICTED: similar to microsomal NAD+-dependent...   160   7e-40
Alignment   gi|XP_869667.1| PREDICTED: similar to microsomal NAD+-dependent...   160   7e-40
Alignment   gi|XP_601132.2| PREDICTED: similar to microsomal NAD+-dependent...   157   8e-39
Alignment   gi|XP_871276.1| PREDICTED: similar to retinol dehydrogenase 16 ...   150   1e-36
Alignment   gi|XP_583421.2| PREDICTED: similar to orphan short-chain dehydr...   134   5e-32

>ref|NP_001030472.1| hypothetical protein LOC533086 [Bos taurus]
          Length = 317

 Score =  169 bits (428), Expect = 2e-42
 Identities = 98/202 (48%), Positives = 125/202 (61%), Gaps = 1/202 (0%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW             RW+RERQ+VSHL DK+VFITGCDSGFGN LARQLD+RGLRVLA C
Sbjct: 1   MWLYLAVLLGLYYLLRWFRERQVVSHLQDKFVFITGCDSGFGNQLARQLDLRGLRVLAGC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GA+QL+ QTSDRL  V+LDVTKTES AAA +WV+E V ++ +WG V+ A  F    
Sbjct: 61  LTEQGAEQLRNQTSDRLQTVILDVTKTESIAAATEWVKECVGDRGLWGLVNNAGIFHSHG 120

Query: 485 IT*WLKNENRIHTLQMELHWCDRSDP*HASPGEKRTREKCPRLPP-LGRVAFFGEIYSYS 661
              W+K E    TL++ L            P  ++ + +   +   LGR+AFFG +YS S
Sbjct: 121 YAEWIKIETYRDTLRVNLIGVIEVTL-SMLPLVRKAQGRIVNVSSILGRIAFFGAVYSCS 179

Query: 662 PTGVESLFHIPEMSLINFGWEI 727
             GVE+   I    L +FG ++
Sbjct: 180 KYGVEAFSDILRRELQHFGVKV 201


>ref|XP_597943.2| PREDICTED: similar to microsomal NAD+-dependent retinol
           dehydrogenase 4 [Bos taurus]
          Length = 260

 Score =  152 bits (384), Expect(2) = 4e-42
 Identities = 77/138 (55%), Positives = 93/138 (67%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW             RWYRERQ+VSHL DK+VFITGCDSGFGN LARQLD RGLRVLAAC
Sbjct: 1   MWLYLVVLVVLYYLLRWYRERQVVSHLEDKFVFITGCDSGFGNRLARQLDQRGLRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GA+QL+ QTSDRL  V+LDVTKTE+  A   WV+E V ++ +WG V+ A    P+ 
Sbjct: 61  LTEQGAEQLRNQTSDRLQTVILDVTKTENVTATTNWVKEHVGDRGLWGLVNNAGICTPMA 120

Query: 485 IT*WLKNENRIHTLQMEL 538
              WL  ++ +  L + L
Sbjct: 121 PNEWLTKQDFVKVLDVNL 138



 Score = 37.4 bits (85), Expect(2) = 4e-42
 Identities = 18/48 (37%), Positives = 30/48 (62%)
 Frame = +3

Query: 534 NSIGVTEVTLNMLPLVKKEQGRNVQGSRLWGELLFLEKSTPTPQLGWK 677
           N +GV +VTL++L LV+K +GR V  S + G +  + ++T  P   W+
Sbjct: 137 NLLGVIDVTLSLLSLVRKARGRVVNVSSVLGRVSLVLQATAYPSTVWR 184


>ref|XP_879080.1| PREDICTED: similar to microsomal NAD+-dependent retinol
           dehydrogenase 4 isoform 5 [Bos taurus]
          Length = 317

 Score =  160 bits (406), Expect = 7e-40
 Identities = 95/202 (47%), Positives = 120/202 (59%), Gaps = 1/202 (0%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW             RWYRERQ+VSHL DK+VFITGCDSGFGNLLARQLD+RGLRVLAAC
Sbjct: 1   MWLYLVVLVGLYYLLRWYRERQVVSHLRDKFVFITGCDSGFGNLLARQLDLRGLRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GA+QL+ QTSDRL  V+LDVTKT+S AAA +WV+E V ++ +WG V+ A    P  
Sbjct: 61  LTEKGAEQLRNQTSDRLQTVILDVTKTDSVAAATEWVKERVGDRGLWGLVNNAGISTPTA 120

Query: 485 IT*WLKNENRIHTLQMELHWCDRSDP*HASPGEKRTREKCPRLPP-LGRVAFFGEIYSYS 661
              WL  ++ +  L + L            P  ++ R +   +   +GRVA  G  Y  S
Sbjct: 121 PNEWLTKQDFMKILDVNLLGV-IDVTLSVLPLVRKARGRVVNVSSIMGRVALLGGGYCMS 179

Query: 662 PTGVESLFHIPEMSLINFGWEI 727
             GVE+        L  FG ++
Sbjct: 180 KYGVEAFSDSLRRELSYFGVKV 201


>ref|XP_878985.1| PREDICTED: similar to microsomal NAD+-dependent retinol
           dehydrogenase 4 isoform 4 [Bos taurus]
          Length = 317

 Score =  160 bits (406), Expect = 7e-40
 Identities = 95/202 (47%), Positives = 120/202 (59%), Gaps = 1/202 (0%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW             RWYRERQ+VSHL DK+VFITGCDSGFGNLLARQLD+RGLRVLAAC
Sbjct: 1   MWLYLVVLVGLYYLLRWYRERQVVSHLRDKFVFITGCDSGFGNLLARQLDLRGLRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GA+QL+ QTSDRL  V+LDVTKT+S AAA +WV+E V ++ +WG V+ A    P  
Sbjct: 61  LTEKGAEQLRNQTSDRLQTVILDVTKTDSVAAATEWVKERVGDRGLWGLVNNAGISTPTA 120

Query: 485 IT*WLKNENRIHTLQMELHWCDRSDP*HASPGEKRTREKCPRLPP-LGRVAFFGEIYSYS 661
              WL  ++ +  L + L            P  ++ R +   +   +GRVA  G  Y  S
Sbjct: 121 PNEWLTKQDFMKILDVNLLGV-IDVTLSVLPLVRKARGRVVNVSSIMGRVALLGGGYCMS 179

Query: 662 PTGVESLFHIPEMSLINFGWEI 727
             GVE+        L  FG ++
Sbjct: 180 KYGVEAFSDSLRRELSYFGVKV 201


>ref|XP_878888.1| PREDICTED: similar to microsomal NAD+-dependent retinol
           dehydrogenase 4 isoform 3 [Bos taurus]
          Length = 317

 Score =  160 bits (406), Expect = 7e-40
 Identities = 95/202 (47%), Positives = 120/202 (59%), Gaps = 1/202 (0%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW             RWYRERQ+VSHL DK+VFITGCDSGFGNLLARQLD+RGLRVLAAC
Sbjct: 1   MWLYLVVLVGLYYLLRWYRERQVVSHLRDKFVFITGCDSGFGNLLARQLDLRGLRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GA+QL+ QTSDRL  V+LDVTKT+S AAA +WV+E V ++ +WG V+ A    P  
Sbjct: 61  LTEKGAEQLRNQTSDRLQTVILDVTKTDSVAAATEWVKERVGDRGLWGLVNNAGISTPTA 120

Query: 485 IT*WLKNENRIHTLQMELHWCDRSDP*HASPGEKRTREKCPRLPP-LGRVAFFGEIYSYS 661
              WL  ++ +  L + L            P  ++ R +   +   +GRVA  G  Y  S
Sbjct: 121 PNEWLTKQDFMKILDVNLLGV-IDVTLSVLPLVRKARGRVVNVSSIMGRVALLGGGYCMS 179

Query: 662 PTGVESLFHIPEMSLINFGWEI 727
             GVE+        L  FG ++
Sbjct: 180 KYGVEAFSDSLRRELSYFGVKV 201


>ref|XP_878794.1| PREDICTED: similar to microsomal NAD+-dependent retinol
           dehydrogenase 4 isoform 2 [Bos taurus]
          Length = 317

 Score =  160 bits (406), Expect = 7e-40
 Identities = 95/202 (47%), Positives = 120/202 (59%), Gaps = 1/202 (0%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW             RWYRERQ+VSHL DK+VFITGCDSGFGNLLARQLD+RGLRVLAAC
Sbjct: 1   MWLYLVVLVGLYYLLRWYRERQVVSHLRDKFVFITGCDSGFGNLLARQLDLRGLRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GA+QL+ QTSDRL  V+LDVTKT+S AAA +WV+E V ++ +WG V+ A    P  
Sbjct: 61  LTEKGAEQLRNQTSDRLQTVILDVTKTDSVAAATEWVKERVGDRGLWGLVNNAGISTPTA 120

Query: 485 IT*WLKNENRIHTLQMELHWCDRSDP*HASPGEKRTREKCPRLPP-LGRVAFFGEIYSYS 661
              WL  ++ +  L + L            P  ++ R +   +   +GRVA  G  Y  S
Sbjct: 121 PNEWLTKQDFMKILDVNLLGV-IDVTLSVLPLVRKARGRVVNVSSIMGRVALLGGGYCMS 179

Query: 662 PTGVESLFHIPEMSLINFGWEI 727
             GVE+        L  FG ++
Sbjct: 180 KYGVEAFSDSLRRELSYFGVKV 201


>ref|XP_869667.1| PREDICTED: similar to microsomal NAD+-dependent retinol
           dehydrogenase 4 isoform 1 [Bos taurus]
          Length = 317

 Score =  160 bits (406), Expect = 7e-40
 Identities = 95/202 (47%), Positives = 120/202 (59%), Gaps = 1/202 (0%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW             RWYRERQ+VSHL DK+VFITGCDSGFGNLLARQLD+RGLRVLAAC
Sbjct: 1   MWLYLVVLVGLYYLLRWYRERQVVSHLRDKFVFITGCDSGFGNLLARQLDLRGLRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GA+QL+ QTSDRL  V+LDVTKT+S AAA +WV+E V ++ +WG V+ A    P  
Sbjct: 61  LTEKGAEQLRNQTSDRLQTVILDVTKTDSVAAATEWVKERVGDRGLWGLVNNAGISTPTA 120

Query: 485 IT*WLKNENRIHTLQMELHWCDRSDP*HASPGEKRTREKCPRLPP-LGRVAFFGEIYSYS 661
              WL  ++ +  L + L            P  ++ R +   +   +GRVA  G  Y  S
Sbjct: 121 PNEWLTKQDFMKILDVNLLGV-IDVTLSVLPLVRKARGRVVNVSSIMGRVALLGGGYCMS 179

Query: 662 PTGVESLFHIPEMSLINFGWEI 727
             GVE+        L  FG ++
Sbjct: 180 KYGVEAFSDSLRRELSYFGVKV 201


>ref|XP_601132.2| PREDICTED: similar to microsomal NAD+-dependent retinol
           dehydrogenase 4 [Bos taurus]
          Length = 338

 Score =  157 bits (397), Expect = 8e-39
 Identities = 90/186 (48%), Positives = 116/186 (62%), Gaps = 1/186 (0%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW             RWYRERQ+VSHL DK+VFITGCDSGFGN LARQLD++GLRVLAAC
Sbjct: 1   MWLYLAVLLGLYYFLRWYRERQVVSHLRDKFVFITGCDSGFGNQLARQLDLKGLRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           L + GA+QL+ QTSDRL  V+LDVTKTES AAA +WV+E V ++ +WG V+ A    P+ 
Sbjct: 61  LMKQGAEQLRNQTSDRLQTVILDVTKTESVAAATEWVKERVGDRGLWGLVNNAGICTPMA 120

Query: 485 IT*WLKNENRIHTLQMELHWCDRSDP*HASPGEKRTREKCPRLPP-LGRVAFFGEIYSYS 661
              WL  ++ +  L++ L            P  ++ R     +   +GR+A FG  YS S
Sbjct: 121 PNQWLTKQDFVKILEVNLLGV-IDVTLSLLPLVRKARGHVVNVSSVMGRMAVFGGGYSMS 179

Query: 662 PTGVES 679
             GVE+
Sbjct: 180 KYGVEA 185


>ref|XP_871276.1| PREDICTED: similar to retinol dehydrogenase 16 [Bos taurus]
          Length = 180

 Score =  150 bits (378), Expect = 1e-36
 Identities = 89/188 (47%), Positives = 111/188 (59%), Gaps = 9/188 (4%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW             RWYRERQ+VSHL DK+VFITGCDSGFGNLLARQLD+RGL VLAAC
Sbjct: 1   MWLYLVVLMGLYYLLRWYRERQVVSHLRDKFVFITGCDSGFGNLLARQLDLRGLMVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GA+QL+ Q SDRL  V+LDVTKTES A A +WV+E V ++ +WG V+ A    P  
Sbjct: 61  LTEQGAEQLRNQMSDRLQTVILDVTKTESIAEATEWVKEDVGDRGLWGLVNNAGILLPAA 120

Query: 485 IT*W--------LKNENRIHTLQMELHWCDRSDP*HASPGEKRTREKCPRL-PPLGRVAF 637
              W        + N N I  +++ L +          P  ++TR +   +  P  RV+ 
Sbjct: 121 PNEWQTKDDFSKILNVNLIGLIEVTLSF---------PPLIRKTRGRVVNVSSPARRVSL 171

Query: 638 FGEIYSYS 661
           FG  Y  S
Sbjct: 172 FGGGYCIS 179


>ref|XP_583421.2| PREDICTED: similar to orphan short-chain dehydrogenase / reductase
           [Bos taurus]
          Length = 313

 Score =  134 bits (338), Expect = 5e-32
 Identities = 83/187 (44%), Positives = 107/187 (57%), Gaps = 1/187 (0%)
 Frame = +2

Query: 170 RWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEAGAQQLKKQTSD 349
           RW++   +V +L DKYVFITGCDSGFGNLLARQL  RG+RVLAAC T+ GAQ+L++ TS 
Sbjct: 12  RWFKNCNLVRNLSDKYVFITGCDSGFGNLLARQLVDRGMRVLAACFTKEGAQKLQQDTSY 71

Query: 350 RLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLCIT*WLKNENRIHTLQ 529
           +L  +LLDVTKTES  AA QWV + V EQ +W  V+ A    P     WL  E+ +  + 
Sbjct: 72  QLQTILLDVTKTESIKAATQWVRDQVGEQGLWALVNNAGVGLPSGPNEWLTKEDFVKVIN 131

Query: 530 MELHWCDRSDP*HASPGEKRTREKCPRLPPL-GRVAFFGEIYSYSPTGVESLFHIPEMSL 706
           + L         H  P  K+ R +   +    GRVA  G  Y  S  GVE+        L
Sbjct: 132 VNLVGLIEVTL-HMLPMVKKARGRVVNMSSSGGRVAVIGGGYCISKFGVEAFSDSIRREL 190

Query: 707 INFGWEI 727
             FG ++
Sbjct: 191 HYFGVKV 197


  Database: RefSeqBP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 16,112,626
  Number of sequences in database:  33,508
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,426,529
Number of Sequences: 33508
Number of extensions: 815246
Number of successful extensions: 3442
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 2790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3415
length of database: 16,112,626
effective HSP length: 99
effective length of database: 12,795,334
effective search space used: 1868118764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqHP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-024864
         (739 letters)

Database: RefSeqHP 
           39,411 sequences; 17,774,539 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_003716.2| 3-hydroxysteroid epimerase [Homo sapiens]            172   3e-43
Alignment   gi|NP_003699.2| retinol dehydrogenase 16 [Homo sapiens]              156   1e-38
Alignment   gi|NP_683695.1| orphan short-chain dehydrogenase / reductase [H...   131   7e-31
Alignment   gi|NP_005762.2| NADP-dependent retinol dehydrogenase/reductase ...   107   2e-29
Alignment   gi|NP_954674.1| NADP-dependent retinol dehydrogenase/reductase ...   107   2e-29
Alignment   gi|NP_002896.2| retinol dehydrogenase 5 (11-cis and 9-cis) [Hom...    94   3e-21
Alignment   gi|NP_976059.1| 3-hydroxybutyrate dehydrogenase precursor [Homo...    56   1e-09
Alignment   gi|NP_976060.1| 3-hydroxybutyrate dehydrogenase precursor [Homo...    56   1e-09
Alignment   gi|NP_004042.1| 3-hydroxybutyrate dehydrogenase precursor [Homo...    56   1e-09
Alignment   gi|NP_002144.1| hydroxysteroid (17-beta) dehydrogenase 2 [Homo ...    50   2e-09

>ref|NP_003716.2| 3-hydroxysteroid epimerase [Homo sapiens]
          Length = 317

 Score =  172 bits (435), Expect = 3e-43
 Identities = 101/202 (50%), Positives = 124/202 (61%), Gaps = 1/202 (0%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW              WYRERQ+VSHL DKYVFITGCDSGFGNLLARQLD RGLRVLAAC
Sbjct: 1   MWLYLAAFVGLYYLLHWYRERQVVSHLQDKYVFITGCDSGFGNLLARQLDARGLRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GA+QL+ QTSDRL  V LDVTK ES AAA QWV+E V ++ +WG V+ A    P+ 
Sbjct: 61  LTEKGAEQLRGQTSDRLETVTLDVTKMESIAAATQWVKEHVGDRGLWGLVNNAGILTPIT 120

Query: 485 IT*WLKNENRIHTLQMELHWCDRSDP*HASPGEKRTREKCPRLPP-LGRVAFFGEIYSYS 661
           +  WL  E+ ++ L++ L    +       P  +R R +   +   LGRVAFF   Y  S
Sbjct: 121 LCEWLNTEDSMNMLKVNLIGVIQVTL-SMLPLVRRARGRIVNVSSILGRVAFFVGGYCVS 179

Query: 662 PTGVESLFHIPEMSLINFGWEI 727
             GVE+   I    + +FG +I
Sbjct: 180 KYGVEAFSDILRREIQHFGVKI 201


>ref|NP_003699.2| retinol dehydrogenase 16 [Homo sapiens]
          Length = 317

 Score =  156 bits (395), Expect = 1e-38
 Identities = 96/202 (47%), Positives = 118/202 (58%), Gaps = 1/202 (0%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW              WYRERQ++SHL DKYVFITGCDSGFG LLARQLD RGLRVLAAC
Sbjct: 1   MWLYLAVFVGLYYLLHWYRERQVLSHLRDKYVFITGCDSGFGKLLARQLDARGLRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GA+QL+ QTSDRL  V LDVTKTES AAA QWV+E VR++ +WG V+ A    P  
Sbjct: 61  LTEKGAEQLRGQTSDRLETVTLDVTKTESVAAAAQWVKECVRDKGLWGLVNNAGISLPTA 120

Query: 485 IT*WLKNENRIHTLQMELHWCDRSDP*HASPGEKRTREKCPRL-PPLGRVAFFGEIYSYS 661
               L  ++ +  L + L         +  P  +R R +   +   +GRV+ FG  Y  S
Sbjct: 121 PNELLTKQDLLTILDVNLLGV-IDVTLNLLPLVRRARGRVVNVFSVMGRVSLFGGGYCIS 179

Query: 662 PTGVESLFHIPEMSLINFGWEI 727
             GVE+        L  FG ++
Sbjct: 180 KYGVEAFSDSLRRELSYFGVKV 201


>ref|NP_683695.1| orphan short-chain dehydrogenase / reductase [Homo sapiens]
          Length = 313

 Score =  131 bits (329), Expect = 7e-31
 Identities = 80/187 (42%), Positives = 106/187 (56%), Gaps = 1/187 (0%)
 Frame = +2

Query: 170 RWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEAGAQQLKKQTSD 349
           RW++   +V +L +KYVFITGCDSGFGNLLA+QL  RG++VLAAC TE G+Q+L++ TS 
Sbjct: 12  RWFKNCNLVGNLSEKYVFITGCDSGFGNLLAKQLVDRGMQVLAACFTEEGSQKLQRDTSY 71

Query: 350 RLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLCIT*WLKNENRIHTLQ 529
           RL   LLDVTK+ES  AA QWV + V EQ +W  V+ A    P     WL  ++ +  + 
Sbjct: 72  RLQTTLLDVTKSESIKAAAQWVRDKVGEQGLWALVNNAGVGLPSGPNEWLTKDDFVKVIN 131

Query: 530 MELHWCDRSDP*HASPGEKRTREKCPRLPPL-GRVAFFGEIYSYSPTGVESLFHIPEMSL 706
           + L         H  P  KR R +   +    GRVA  G  Y  S  GVE+        L
Sbjct: 132 VNLVGLIEVTL-HMLPMVKRARGRVVNMSSSGGRVAVIGGGYCVSKFGVEAFSDSIRREL 190

Query: 707 INFGWEI 727
             FG ++
Sbjct: 191 YYFGVKV 197


>ref|NP_005762.2| NADP-dependent retinol dehydrogenase/reductase [Homo sapiens]
          Length = 319

 Score =  107 bits (268), Expect(2) = 2e-29
 Identities = 56/123 (45%), Positives = 78/123 (63%), Gaps = 1/123 (0%)
 Frame = +2

Query: 173 WYRERQM-VSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEAGAQQLKKQTSD 349
           W R+ ++ +  + DKY+FITGCDSGFGNL AR  D +G  V+AACLTE+G+  LK +TS+
Sbjct: 16  WTRKGKLKIEDITDKYIFITGCDSGFGNLAARTFDKKGFHVIAACLTESGSTALKAETSE 75

Query: 350 RLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLCIT*WLKNENRIHTLQ 529
           RL  VLLDVT  E+     QWV+  V E+ +WG ++ A     L  T WL  E+    ++
Sbjct: 76  RLRTVLLDVTDPENVKRTAQWVKNQVGEKGLWGLINNAGVPGVLAPTDWLTLEDYREPIE 135

Query: 530 MEL 538
           + L
Sbjct: 136 VNL 138



 Score = 39.3 bits (90), Expect(2) = 2e-29
 Identities = 20/37 (54%), Positives = 24/37 (64%)
 Frame = +3

Query: 522 PSKWNSIGVTEVTLNMLPLVKKEQGRNVQGSRLWGEL 632
           P + N  G+  VTLNMLPLVKK QGR +  S + G L
Sbjct: 133 PIEVNLFGLISVTLNMLPLVKKAQGRVINVSSVGGRL 169


>ref|NP_954674.1| NADP-dependent retinol dehydrogenase/reductase [Homo sapiens]
          Length = 319

 Score =  107 bits (268), Expect(2) = 2e-29
 Identities = 56/123 (45%), Positives = 78/123 (63%), Gaps = 1/123 (0%)
 Frame = +2

Query: 173 WYRERQM-VSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEAGAQQLKKQTSD 349
           W R+ ++ +  + DKY+FITGCDSGFGNL AR  D +G  V+AACLTE+G+  LK +TS+
Sbjct: 16  WTRKGKLKIEDITDKYIFITGCDSGFGNLAARTFDKKGFHVIAACLTESGSTALKAETSE 75

Query: 350 RLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLCIT*WLKNENRIHTLQ 529
           RL  VLLDVT  E+     QWV+  V E+ +WG ++ A     L  T WL  E+    ++
Sbjct: 76  RLRTVLLDVTDPENVKRTAQWVKNQVGEKGLWGLINNAGVPGVLAPTDWLTLEDYREPIE 135

Query: 530 MEL 538
           + L
Sbjct: 136 VNL 138



 Score = 39.3 bits (90), Expect(2) = 2e-29
 Identities = 20/37 (54%), Positives = 24/37 (64%)
 Frame = +3

Query: 522 PSKWNSIGVTEVTLNMLPLVKKEQGRNVQGSRLWGEL 632
           P + N  G+  VTLNMLPLVKK QGR +  S + G L
Sbjct: 133 PIEVNLFGLISVTLNMLPLVKKAQGRVINVSSVGGRL 169


>ref|NP_002896.2| retinol dehydrogenase 5 (11-cis and 9-cis) [Homo sapiens]
          Length = 318

 Score = 93.6 bits (231), Expect(2) = 3e-21
 Identities = 52/111 (46%), Positives = 71/111 (63%)
 Frame = +2

Query: 179 RERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEAGAQQLKKQTSDRLG 358
           R+RQ +    + +VFITGCDSGFG LLA QLD RG RVLA+CLT +GA+ L++  S RL 
Sbjct: 19  RDRQSLP-ASNAFVFITGCDSGFGRLLALQLDQRGFRVLASCLTPSGAEDLQRVASSRLH 77

Query: 359 DVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLCIT*WLKNEN 511
             LLD+T  +S   A +WVE  V+E  ++G V+ A     +  T WL  ++
Sbjct: 78  TTLLDITDPQSVQQAAKWVEMHVKEAGLFGLVNNAGVAGIIGPTPWLTRDD 128



 Score = 26.2 bits (56), Expect(2) = 3e-21
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +3

Query: 534 NSIGVTEVTLNMLPLVKKEQGRNVQGSRLWGEL 632
           N++G   VTL +LPL+++ +GR +  + + G L
Sbjct: 136 NTMGPIGVTLALLPLLQQARGRVINITSVLGRL 168


>ref|NP_976059.1| 3-hydroxybutyrate dehydrogenase precursor [Homo sapiens]
          Length = 343

 Score = 55.8 bits (133), Expect(2) = 1e-09
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
 Frame = +2

Query: 203 LGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTE----AGAQQLKKQTSDRLGDVLL 370
           +G K V +TGCDSGFG  LA+ L  +G  V A CL +     G ++L    SDRL  V L
Sbjct: 53  VGSKAVLVTGCDSGFGFSLAKHLHSKGFLVFAGCLMKDKGHDGVKELDSLNSDRLRTVQL 112

Query: 371 DVTKTESNAAAHQWVEEPVR--EQRIWGPVHYA 463
           +V  +E      + V   ++  E+ +WG V+ A
Sbjct: 113 NVCSSEEVEKVVEIVRSSLKDPEKGMWGLVNNA 145



 Score = 25.0 bits (53), Expect(2) = 1e-09
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 534 NSIGVTEVTLNMLPLVKKEQGRNVQGSRLWGEL 632
           N  G   +T + LPL+++ +GR V  S + G +
Sbjct: 168 NLWGTVRMTKSFLPLIRRAKGRVVNISSMLGRM 200


>ref|NP_976060.1| 3-hydroxybutyrate dehydrogenase precursor [Homo sapiens]
          Length = 343

 Score = 55.8 bits (133), Expect(2) = 1e-09
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
 Frame = +2

Query: 203 LGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTE----AGAQQLKKQTSDRLGDVLL 370
           +G K V +TGCDSGFG  LA+ L  +G  V A CL +     G ++L    SDRL  V L
Sbjct: 53  VGSKAVLVTGCDSGFGFSLAKHLHSKGFLVFAGCLMKDKGHDGVKELDSLNSDRLRTVQL 112

Query: 371 DVTKTESNAAAHQWVEEPVR--EQRIWGPVHYA 463
           +V  +E      + V   ++  E+ +WG V+ A
Sbjct: 113 NVCSSEEVEKVVEIVRSSLKDPEKGMWGLVNNA 145



 Score = 25.0 bits (53), Expect(2) = 1e-09
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 534 NSIGVTEVTLNMLPLVKKEQGRNVQGSRLWGEL 632
           N  G   +T + LPL+++ +GR V  S + G +
Sbjct: 168 NLWGTVRMTKSFLPLIRRAKGRVVNISSMLGRM 200


>ref|NP_004042.1| 3-hydroxybutyrate dehydrogenase precursor [Homo sapiens]
          Length = 343

 Score = 55.8 bits (133), Expect(2) = 1e-09
 Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
 Frame = +2

Query: 203 LGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTE----AGAQQLKKQTSDRLGDVLL 370
           +G K V +TGCDSGFG  LA+ L  +G  V A CL +     G ++L    SDRL  V L
Sbjct: 53  VGSKAVLVTGCDSGFGFSLAKHLHSKGFLVFAGCLMKDKGHDGVKELDSLNSDRLRTVQL 112

Query: 371 DVTKTESNAAAHQWVEEPVR--EQRIWGPVHYA 463
           +V  +E      + V   ++  E+ +WG V+ A
Sbjct: 113 NVCSSEEVEKVVEIVRSSLKDPEKGMWGLVNNA 145



 Score = 25.0 bits (53), Expect(2) = 1e-09
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 534 NSIGVTEVTLNMLPLVKKEQGRNVQGSRLWGEL 632
           N  G   +T + LPL+++ +GR V  S + G +
Sbjct: 168 NLWGTVRMTKSFLPLIRRAKGRVVNISSMLGRM 200


>ref|NP_002144.1| hydroxysteroid (17-beta) dehydrogenase 2 [Homo sapiens]
          Length = 387

 Score = 50.4 bits (119), Expect(2) = 2e-09
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
 Frame = +2

Query: 176 YRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTE--AGAQQLKKQTSD 349
           Y   Q +  +  K V +TG D G G+ L + LD  G  V A  L E   GA++L++  S 
Sbjct: 71  YLSGQELLPVDQKAVLVTGGDCGLGHALCKYLDELGFTVFAGVLNENGPGAEELRRTCSP 130

Query: 350 RLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYA 463
           RL  + +D+TK      A+  V   ++++ +W  ++ A
Sbjct: 131 RLSVLQMDITKPVQIKDAYSKVAAMLQDRGLWAVINNA 168



 Score = 29.3 bits (64), Expect(2) = 2e-09
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 534 NSIGVTEVTLNMLPLVKKEQGRNVQGSRLWG 626
           N  G  EVT   LPL++K +GR V  S + G
Sbjct: 192 NFFGTVEVTKTFLPLLRKSKGRLVNVSSMGG 222


  Database: RefSeqHP
    Posted date:  Aug 2, 2006 12:57 AM
  Number of letters in database: 17,774,539
  Number of sequences in database:  39,411
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,371,413
Number of Sequences: 39411
Number of extensions: 950920
Number of successful extensions: 4499
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 3261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4478
length of database: 17,774,539
effective HSP length: 99
effective length of database: 13,872,850
effective search space used: 2025436100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqCP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-024864
         (739 letters)

Database: RefSeqCP 
           33,732 sequences; 19,266,565 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_538239.2| PREDICTED: similar to 3-hydroxysteroid epimeras...   182   4e-46
Alignment   gi|XP_858059.1| PREDICTED: similar to 3-hydroxysteroid epimeras...   182   4e-46
Alignment   gi|XP_858182.1| PREDICTED: similar to microsomal NAD+-dependent...   162   3e-40
Alignment   gi|XP_531641.2| PREDICTED: similar to microsomal NAD+-dependent...   162   3e-40
Alignment   gi|XP_538240.2| PREDICTED: similar to orphan short-chain dehydr...   134   9e-32
Alignment   gi|XP_545513.2| PREDICTED: similar to NADP-dependent retinol de...   107   9e-24
Alignment   gi|XP_538220.2| PREDICTED: similar to 11-cis retinol dehydrogen...    98   2e-23
Alignment   gi|XP_546810.2| PREDICTED: similar to hydroxysteroid (17-beta) ...    59   6e-11
Alignment   gi|XP_545160.2| PREDICTED: similar to 3-hydroxybutyrate dehydro...    55   2e-09
Alignment   gi|XP_853935.1| PREDICTED: similar to Corticosteroid 11-beta-de...    44   3e-06

>ref|XP_538239.2| PREDICTED: similar to 3-hydroxysteroid epimerase isoform 3 [Canis
           familiaris]
          Length = 317

 Score =  182 bits (461), Expect = 4e-46
 Identities = 106/202 (52%), Positives = 125/202 (61%), Gaps = 1/202 (0%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW             RWYRERQ+VSHL DKYVFITGCDSGFGNLLARQLD+RGLRVLAAC
Sbjct: 1   MWWSLAVLVGLYCLLRWYRERQVVSHLHDKYVFITGCDSGFGNLLARQLDLRGLRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GAQQL+ QTSDRL  V+LDVTKTES  AA QWVEE V ++ +WG V+ A  F P C
Sbjct: 61  LTEKGAQQLRSQTSDRLDTVILDVTKTESILAATQWVEERVGDRGLWGLVNNAGIFHPHC 120

Query: 485 IT*WLKNENRIHTLQMELHWCDRSDP*HASPGEKRTREKCPRLPP-LGRVAFFGEIYSYS 661
            + WLK E  +   ++ L            P  +R R +   +   LGR+AFFG  Y  S
Sbjct: 121 YSEWLKIEAYVDVFKVNLTGLIEVTL-SMLPLLRRARGRIVNVSSILGRLAFFGGAYCSS 179

Query: 662 PTGVESLFHIPEMSLINFGWEI 727
             GVE+        L +FG +I
Sbjct: 180 KYGVEAFSDTLRRELRHFGVKI 201


>ref|XP_858059.1| PREDICTED: similar to 3-hydroxysteroid epimerase isoform 4 [Canis
           familiaris]
          Length = 323

 Score =  182 bits (461), Expect = 4e-46
 Identities = 106/202 (52%), Positives = 125/202 (61%), Gaps = 1/202 (0%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW             RWYRERQ+VSHL DKYVFITGCDSGFGNLLARQLD+RGLRVLAAC
Sbjct: 1   MWWSLAVLVGLYCLLRWYRERQVVSHLHDKYVFITGCDSGFGNLLARQLDLRGLRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GAQQL+ QTSDRL  V+LDVTKTES  AA QWVEE V ++ +WG V+ A  F P C
Sbjct: 61  LTEKGAQQLRSQTSDRLDTVILDVTKTESILAATQWVEERVGDRGLWGLVNNAGIFHPHC 120

Query: 485 IT*WLKNENRIHTLQMELHWCDRSDP*HASPGEKRTREKCPRLPP-LGRVAFFGEIYSYS 661
            + WLK E  +   ++ L            P  +R R +   +   LGR+AFFG  Y  S
Sbjct: 121 YSEWLKIEAYVDVFKVNLTGLIEVTL-SMLPLLRRARGRIVNVSSILGRLAFFGGAYCSS 179

Query: 662 PTGVESLFHIPEMSLINFGWEI 727
             GVE+        L +FG +I
Sbjct: 180 KYGVEAFSDTLRRELRHFGVKI 201


>ref|XP_858182.1| PREDICTED: similar to microsomal NAD+-dependent retinol
           dehydrogenase 4 isoform 2 [Canis familiaris]
          Length = 319

 Score =  162 bits (410), Expect = 3e-40
 Identities = 97/201 (48%), Positives = 115/201 (57%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW             RWYRERQ+VSHL DKYVFITGCDSGFGNLLARQLD+RGLRVLAAC
Sbjct: 1   MWWSLAVLVGLYYLLRWYRERQVVSHLQDKYVFITGCDSGFGNLLARQLDLRGLRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GAQQL+ QTSDRL  V+LDVTKTES  AA QWVEE V ++ +WG V+ A    P  
Sbjct: 61  LTEKGAQQLRSQTSDRLDTVILDVTKTESILAATQWVEEHVGDRGLWGLVNNAGISWPTA 120

Query: 485 IT*WLKNENRIHTLQMELHWCDRSDP*HASPGEKRTREKCPRLPPLGRVAFFGEIYSYSP 664
              WL  ++ +  L + L           S   K           +GR++  G  Y  S 
Sbjct: 121 PNEWLTKDDFMKILDVNLLGLVEVTLSLLSLVRKARGRVVNVSSIMGRLSLCGGGYCISK 180

Query: 665 TGVESLFHIPEMSLINFGWEI 727
            GVE+        L  FG ++
Sbjct: 181 YGVEAFSDSLRRELTYFGVKV 201


>ref|XP_531641.2| PREDICTED: similar to microsomal NAD+-dependent retinol
           dehydrogenase 4 isoform 1 [Canis familiaris]
          Length = 317

 Score =  162 bits (410), Expect = 3e-40
 Identities = 97/201 (48%), Positives = 115/201 (57%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW             RWYRERQ+VSHL DKYVFITGCDSGFGNLLARQLD+RGLRVLAAC
Sbjct: 1   MWWSLAVLVGLYYLLRWYRERQVVSHLQDKYVFITGCDSGFGNLLARQLDLRGLRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GAQQL+ QTSDRL  V+LDVTKTES  AA QWVEE V ++ +WG V+ A    P  
Sbjct: 61  LTEKGAQQLRSQTSDRLDTVILDVTKTESILAATQWVEEHVGDRGLWGLVNNAGISWPTA 120

Query: 485 IT*WLKNENRIHTLQMELHWCDRSDP*HASPGEKRTREKCPRLPPLGRVAFFGEIYSYSP 664
              WL  ++ +  L + L           S   K           +GR++  G  Y  S 
Sbjct: 121 PNEWLTKDDFMKILDVNLLGLVEVTLSLLSLVRKARGRVVNVSSIMGRLSLCGGGYCISK 180

Query: 665 TGVESLFHIPEMSLINFGWEI 727
            GVE+        L  FG ++
Sbjct: 181 YGVEAFSDSLRRELTYFGVKV 201


>ref|XP_538240.2| PREDICTED: similar to orphan short-chain dehydrogenase / reductase
           [Canis familiaris]
          Length = 313

 Score =  134 bits (337), Expect = 9e-32
 Identities = 84/187 (44%), Positives = 105/187 (56%), Gaps = 1/187 (0%)
 Frame = +2

Query: 170 RWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEAGAQQLKKQTSD 349
           RW +   +V +L DKYVFITGCDSGFGNLLARQL  RG+RVLAAC TE GAQ+L++ TS 
Sbjct: 12  RWLKNCNLVRNLSDKYVFITGCDSGFGNLLARQLVNRGMRVLAACFTEEGAQKLQRDTSY 71

Query: 350 RLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLCIT*WLKNENRIHTLQ 529
           RL   LLDVT+TES  AA QWV + V EQ +W  V+ A    P     WL  E+ +  + 
Sbjct: 72  RLQTTLLDVTRTESIQAATQWVRDQVGEQGLWALVNNAGIGLPSGPNEWLTKEDFVKVIN 131

Query: 530 MELHWCDRSDP*HASPGEKRTREKCPRLPPL-GRVAFFGEIYSYSPTGVESLFHIPEMSL 706
           + L         H  P  K+ R +   +    GRVA  G  Y  S  GVE+        L
Sbjct: 132 VNLVGLIEVTL-HMLPMVKKARGRVVNMSSSGGRVALIGGGYCVSKFGVEAFSDSIRREL 190

Query: 707 INFGWEI 727
             FG ++
Sbjct: 191 HYFGVKV 197


>ref|XP_545513.2| PREDICTED: similar to NADP-dependent retinol
           dehydrogenase/reductase [Canis familiaris]
          Length = 753

 Score =  107 bits (268), Expect = 9e-24
 Identities = 67/170 (39%), Positives = 97/170 (57%), Gaps = 2/170 (1%)
 Frame = +2

Query: 173 WYRERQM-VSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEAGAQQLKKQTSD 349
           W  +RQ+ ++ + DKY+FITGCD+GFGNL AR  D +G  V+AACLTE+ +  LK +TS+
Sbjct: 450 WNYKRQLKIADITDKYIFITGCDTGFGNLAARTFDKKGFHVIAACLTESESTALKAETSE 509

Query: 350 RLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLCIT*WLKNENRIHTLQ 529
           RL  VLLDVT  E+     QWV+  V E+ +WG ++ A     L  T WL  E+    ++
Sbjct: 510 RLHTVLLDVTDPENVKRTAQWVKNQVGEKGLWGLINNAGVLGVLAPTDWLTVEDYREPIE 569

Query: 530 MELHWCDRSDP*HASPGEKRTREKCPRLPPL-GRVAFFGEIYSYSPTGVE 676
           + L     S   +  P  K+ R +   +  + GR+A  G  Y+ S   VE
Sbjct: 570 VNLFGL-ISVTLNLLPLVKKARGRIINVSSIGGRLAISGGGYTPSKYAVE 618


>ref|XP_538220.2| PREDICTED: similar to 11-cis retinol dehydrogenase (11-cis RDH)
           [Canis familiaris]
          Length = 339

 Score = 97.8 bits (242), Expect(2) = 2e-23
 Identities = 60/141 (42%), Positives = 78/141 (55%)
 Frame = +2

Query: 89  LPNKHFSGGPHTMWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQ 268
           LP    SG    MW              W R++Q +    D +VFITGCDSGFG LLA +
Sbjct: 12  LPPAGHSGS--AMWLPLLLGVLLWAVLWWLRDQQSLP-ASDAFVFITGCDSGFGRLLALR 68

Query: 269 LDVRGLRVLAACLTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWG 448
           LD RG RVLA+CLT AGA+ L++  S RL   LLDVT+ +S   A +WVE  V E  ++G
Sbjct: 69  LDQRGFRVLASCLTPAGAEDLQRVASSRLHTTLLDVTEPQSVQRAAKWVETHVGEAGLFG 128

Query: 449 PVHYARTFPPLCIT*WLKNEN 511
            V+ A     +  T WL  ++
Sbjct: 129 LVNNAGVAGIIGPTPWLTQDD 149



 Score = 29.3 bits (64), Expect(2) = 2e-23
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = +3

Query: 534 NSIGVTEVTLNMLPLVKKEQGRNVQGSRLWGEL 632
           N++G   VTL +LPL+++ +GR V  S + G L
Sbjct: 157 NTLGPIRVTLALLPLLQQSRGRVVNISSVLGRL 189


>ref|XP_546810.2| PREDICTED: similar to hydroxysteroid (17-beta) dehydrogenase 2
           [Canis familiaris]
          Length = 382

 Score = 58.5 bits (140), Expect(2) = 6e-11
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
 Frame = +2

Query: 176 YRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTE--AGAQQLKKQTSD 349
           Y   Q +  +  K V ITG DSGFG+ L++ LD  G  V    L E  +GA++L++  S 
Sbjct: 72  YLSGQELLPVDQKAVLITGGDSGFGHALSKYLDELGFTVFVGVLDEKGSGAEELRRTCSK 131

Query: 350 RLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYA 463
           RL  + +D+T  +    AH  V E ++++ +W  V+ A
Sbjct: 132 RLSVLQMDITDQQQIKDAHSKVVEKLQDRGLWAVVNNA 169



 Score = 26.6 bits (57), Expect(2) = 6e-11
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +3

Query: 534 NSIGVTEVTLNMLPLVKKEQGRNVQGSRL 620
           N  G  EVT   LPL++K +GR V  S +
Sbjct: 193 NFFGAVEVTKAFLPLLRKSKGRLVNISSM 221


>ref|XP_545160.2| PREDICTED: similar to 3-hydroxybutyrate dehydrogenase precursor
           [Canis familiaris]
          Length = 299

 Score = 55.5 bits (132), Expect(2) = 2e-09
 Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
 Frame = +2

Query: 191 MVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTE----AGAQQLKKQTSDRLG 358
           ++  +G K V +TGCDSGFG  LA+ L  +G  V A CL +     G ++L    SDRL 
Sbjct: 5   LLKQVGSKAVLVTGCDSGFGFSLAKHLHSKGFLVFAGCLMKDQGGDGVKELDGLKSDRLR 64

Query: 359 DVLLDVTKTESNAAAHQWVEEPVR--EQRIWGPVHYA 463
            + L+V K E      + V   +   E+ +WG V+ A
Sbjct: 65  TIQLNVCKGEEVERVVEVVRSSLEDPEKGMWGLVNNA 101



 Score = 24.6 bits (52), Expect(2) = 2e-09
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 534 NSIGVTEVTLNMLPLVKKEQGRNVQGSRLWGEL 632
           N  G  ++T   LPL+++ +GR V  S + G +
Sbjct: 124 NLWGTVQMTKAFLPLIRRARGRIVNISSMLGRM 156


>ref|XP_853935.1| PREDICTED: similar to Corticosteroid 11-beta-dehydrogenase, isozyme
           2 (11-DH2) (11-beta-hydroxysteroid dehydrogenase type 2)
           (11-beta-HSD2) (NAD-dependent 11-beta-hydroxysteroid
           dehydrogenase) [Canis familiaris]
          Length = 323

 Score = 44.3 bits (103), Expect(2) = 3e-06
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
 Frame = +2

Query: 233 CDSGFGNLLARQLDVRGLRVLAAC--LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAH 406
           CDSGFG   A++LD  G  VLA    L   GA +L+   S RL  + +D+TK    + A 
Sbjct: 8   CDSGFGKETAKKLDAMGFTVLATVLELDGPGALELRACCSPRLRLLQMDLTKPADISRAL 67

Query: 407 QWVEEPVREQRIWGPVHYA 463
           ++ +       +WG V+ A
Sbjct: 68  EFTKAHTSSTGLWGLVNNA 86



 Score = 25.0 bits (53), Expect(2) = 3e-06
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +3

Query: 534 NSIGVTEVTLNMLPLVKKEQGRNV 605
           N  G  E+T  +LPL+++ +GR V
Sbjct: 110 NFFGALELTKGLLPLLRRSRGRIV 133


  Database: RefSeqCP
    Posted date:  Aug 1, 2006  9:25 PM
  Number of letters in database: 19,266,565
  Number of sequences in database:  33,732
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,505,257
Number of Sequences: 33732
Number of extensions: 952733
Number of successful extensions: 4051
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 3248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4042
length of database: 19,266,565
effective HSP length: 100
effective length of database: 15,893,365
effective search space used: 2304537925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqMP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-024864
         (739 letters)

Database: RefSeqMP 
           45,328 sequences; 21,768,885 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_038814.1| hydroxysteroid (17-beta) dehydrogenase 9 [Mus m...   167   8e-42
Alignment   gi|NP_671755.1| retinol dehydrogenase similar protein 2 [Mus mu...   152   9e-42
Alignment   gi|NP_955017.1| truncated cis-retinol/3alpha-hydroxysterol shor...   144   7e-39
Alignment   gi|NP_663399.1| cis-retinol/3alpha hydroxysterol short-chain de...   138   3e-37
Alignment   gi|NP_536684.1| retinol dehydrogenase 1 (all trans) [Mus musculus]   151   6e-37
Alignment   gi|NP_033066.1| retinol dehydrogenase 16 [Mus musculus]              150   1e-36
Alignment   gi|NP_059501.1| retinol dehydrogenase 7 [Mus musculus]               150   1e-36
Alignment   gi|NP_694773.1| retinol dehydrogenase 9 [Mus musculus]               147   8e-36
Alignment   gi|NP_081577.1| retinol dehydrogenase similar protein [Mus musc...   123   2e-28
Alignment   gi|NP_780721.1| NADP-dependent retinol dehydrogenase/reductase ...   112   5e-25

>ref|NP_038814.1| hydroxysteroid (17-beta) dehydrogenase 9 [Mus musculus]
          Length = 317

 Score =  167 bits (424), Expect = 8e-42
 Identities = 95/201 (47%), Positives = 119/201 (59%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW             RWYRERQ+VSHL DKYVFITGCDSGFGNLLARQLD RG+RVLAAC
Sbjct: 1   MWFYLVTLVGLYHLLRWYRERQVVSHLQDKYVFITGCDSGFGNLLARQLDRRGMRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GA++L+ +TSDRL  V+LDVTKTES  AA QWV+E V ++ +WG V+ A    P  
Sbjct: 61  LTEKGAEELRNKTSDRLETVILDVTKTESIVAATQWVKERVGDRGLWGLVNNAGVLQPFA 120

Query: 485 IT*WLKNENRIHTLQMELHWCDRSDP*HASPGEKRTREKCPRLPPLGRVAFFGEIYSYSP 664
              W + E+ +   Q+ L    +         +K           LGRVA FG  YS S 
Sbjct: 121 YIEWYRPEDYMPIFQVNLIGLTQVTISMLFLVKKARGRIVNVSSALGRVALFGGFYSCSK 180

Query: 665 TGVESLFHIPEMSLINFGWEI 727
            GVE+   +    + +FG ++
Sbjct: 181 YGVEAFSDVLRHEVQDFGVKV 201


>ref|NP_671755.1| retinol dehydrogenase similar protein 2 [Mus musculus]
          Length = 318

 Score =  152 bits (383), Expect(2) = 9e-42
 Identities = 78/138 (56%), Positives = 96/138 (69%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW             R++RERQ+VSHL DKYVFITGCDSGFGNLLARQLD RG+RVLAAC
Sbjct: 1   MWLYLVPLVGLWTLLRFFRERQVVSHLQDKYVFITGCDSGFGNLLARQLDRRGMRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GA++L+ +TSDRL  V+LDVTKTES  AA QWV+E V  + +WG V+ A    PL 
Sbjct: 61  LTEKGAEELRNKTSDRLETVILDVTKTESIVAATQWVKERVGNRGLWGLVNNAGISVPLG 120

Query: 485 IT*WLKNENRIHTLQMEL 538
           ++ W+  +N    L + L
Sbjct: 121 LSQWMNKQNFASVLDVNL 138



 Score = 37.0 bits (84), Expect(2) = 9e-42
 Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
 Frame = +3

Query: 534 NSIGVTEVTLNMLPLVKKEQGRNVQGSRLWGEL-LFLEKSTPTPQLGWKAFFISRK*ALS 710
           N +G+ EVTL MLPLV+K +GR V  S + G + L         + G +AF  S +  LS
Sbjct: 137 NLLGMIEVTLTMLPLVRKARGRVVNVSSIMGRVSLHGNGGYCISKYGVEAFSDSLRRELS 196

Query: 711 ILGGKSHIL 737
             G K  I+
Sbjct: 197 YFGVKVAII 205


>ref|NP_955017.1| truncated cis-retinol/3alpha-hydroxysterol short-chain
           dehydrogenase [Mus musculus]
          Length = 167

 Score =  144 bits (363), Expect(2) = 7e-39
 Identities = 76/138 (55%), Positives = 92/138 (66%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW              ++RERQ+VSHL DKYVFITGCDSGFGNLLARQLD RG+RVLAAC
Sbjct: 1   MWLYLVALVGLWTLLCFFRERQVVSHLQDKYVFITGCDSGFGNLLARQLDRRGMRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GA+QL+ +TSDRL  V+LDVTKTES  AA QWV+E V  + +WG V+      P  
Sbjct: 61  LTEKGAEQLRNKTSDRLETVILDVTKTESIVAATQWVKERVGNRGLWGLVNNTGISVPSG 120

Query: 485 IT*WLKNENRIHTLQMEL 538
            + W+  +N    L + L
Sbjct: 121 PSQWMDKQNFASILDVNL 138



 Score = 35.0 bits (79), Expect(2) = 7e-39
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 534 NSIGVTEVTLNMLPLVKKEQGRNVQGSRLWG 626
           N +G+ EVTL+MLPLV+K +GR V  S + G
Sbjct: 137 NLLGMIEVTLSMLPLVRKARGRVVNVSSIVG 167


>ref|NP_663399.1| cis-retinol/3alpha hydroxysterol short-chain dehydrogenase-like
           [Mus musculus]
          Length = 318

 Score =  138 bits (347), Expect(2) = 3e-37
 Identities = 72/138 (52%), Positives = 91/138 (65%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW             R++RERQ+V HL DKYVFITGC SGFGNLLARQLD RG+RVLAAC
Sbjct: 1   MWLYMVALLGLWMLLRFFRERQVVDHLQDKYVFITGCGSGFGNLLARQLDRRGMRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
             E GA++L+++TS+RL  V+LDVTKTES  AA QWV+E V  + +WG V+ A    P  
Sbjct: 61  RKEEGAEELRRKTSERLETVILDVTKTESIVAATQWVKERVGNRGLWGLVNNAGISVPSG 120

Query: 485 IT*WLKNENRIHTLQMEL 538
              W+K ++    L + L
Sbjct: 121 PNEWMKKQDFASVLDVNL 138



 Score = 35.8 bits (81), Expect(2) = 3e-37
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = +3

Query: 534 NSIGVTEVTLNMLPLVKKEQGRNVQGSRLWGEL 632
           N +G+ EVTL+MLPLV+K +GR V  S + G +
Sbjct: 137 NLLGLIEVTLSMLPLVRKARGRVVNVSSILGRV 169


>ref|NP_536684.1| retinol dehydrogenase 1 (all trans) [Mus musculus]
          Length = 317

 Score =  151 bits (382), Expect = 6e-37
 Identities = 91/202 (45%), Positives = 118/202 (58%), Gaps = 1/202 (0%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW             R++RERQ+VSHL  KYVFITGCDSGFGNLLARQLD RG+RVLAAC
Sbjct: 1   MWLYLVALVGLWTLLRFFRERQVVSHLQVKYVFITGCDSGFGNLLARQLDRRGMRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GA++L+ +TSDRL  V+LDVTKTES  AA QWV+E V  + +WG V+ A    P  
Sbjct: 61  LTEKGAEELRNKTSDRLETVILDVTKTESIVAATQWVKERVGNRGLWGLVNNAGISTPSG 120

Query: 485 IT*WLKNENRIHTLQMELHWCDRSDP*HASPGEKRTREKCPRLPP-LGRVAFFGEIYSYS 661
              W+K ++    L + L            P  ++ R +   +   +GR++FFG  Y  S
Sbjct: 121 PNEWMKKQDFARVLDVNLLGMIEVTL-SMLPLVRKARGRVVNVSSVMGRMSFFGGGYCIS 179

Query: 662 PTGVESLFHIPEMSLINFGWEI 727
             GVE+        L  FG ++
Sbjct: 180 KYGVEAFSDSLRRELSYFGVKV 201


>ref|NP_033066.1| retinol dehydrogenase 16 [Mus musculus]
          Length = 317

 Score =  150 bits (379), Expect = 1e-36
 Identities = 90/202 (44%), Positives = 116/202 (57%), Gaps = 1/202 (0%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW             R++R RQ+VSHL DKYVFITGCDSGFG LLARQLD RG+RVLAAC
Sbjct: 1   MWLYLVALVGLWTLLRFFRVRQVVSHLQDKYVFITGCDSGFGTLLARQLDRRGMRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GA++L+ +TSDRL  V+LDVTKTES   A QWV+E V  + +WG V+ A    P  
Sbjct: 61  LTEKGAEELRNKTSDRLETVILDVTKTESIVTATQWVKEHVGNRGLWGLVNNAGISTPSG 120

Query: 485 IT*WLKNENRIHTLQMELHWCDRSDP*HASPGEKRTREKCPRLPP-LGRVAFFGEIYSYS 661
              W+K ++  H L + L            P  ++ R +   +   +GRV+ FG  Y  S
Sbjct: 121 PNEWMKKQDFAHVLDVNLLGMIEVTL-SMLPLVRKARGRVVNVSSVMGRVSLFGGGYCIS 179

Query: 662 PTGVESLFHIPEMSLINFGWEI 727
             GVE+        L  FG ++
Sbjct: 180 KYGVEAFSDSLRRELSYFGVKV 201


>ref|NP_059501.1| retinol dehydrogenase 7 [Mus musculus]
          Length = 316

 Score =  150 bits (379), Expect = 1e-36
 Identities = 93/202 (46%), Positives = 118/202 (58%), Gaps = 1/202 (0%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW             R++RERQ+VSHL DKYVFITGCDSGFGNLLARQLD RG+RVLAAC
Sbjct: 1   MWLYLVALVGLWTLLRFFRERQVVSHLQDKYVFITGCDSGFGNLLARQLDRRGMRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GA+QL+ +TSDRL  V+LDVTKTES  AA QWV+E V  + +WG V+ A       
Sbjct: 61  LTEKGAEQLRNKTSDRLETVILDVTKTESIVAATQWVKERVGNRGLWGLVNNA-GICVFA 119

Query: 485 IT*WLKNENRIHTLQMELHWCDRSDP*HASPGEKRTREKCPRL-PPLGRVAFFGEIYSYS 661
           I  WLK E+  + L + L            P  ++ R +   +   +GRV+  G  Y  S
Sbjct: 120 INEWLKKEDFANILDVNLLGMIEVTL-SMLPLVRKARGRVVNISSSMGRVSLCGGGYCIS 178

Query: 662 PTGVESLFHIPEMSLINFGWEI 727
             GVE+        +  FG ++
Sbjct: 179 KYGVEAFSDSLRREISYFGVKV 200


>ref|NP_694773.1| retinol dehydrogenase 9 [Mus musculus]
          Length = 317

 Score =  147 bits (372), Expect = 8e-36
 Identities = 90/202 (44%), Positives = 116/202 (57%), Gaps = 1/202 (0%)
 Frame = +2

Query: 125 MWXXXXXXXXXXXXXRWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAAC 304
           MW              ++RERQ+VS+L DKYVFITGCDSGFGNLLARQLD RG+RVLAAC
Sbjct: 1   MWLFLVALVGLWTLLCFFRERQVVSYLQDKYVFITGCDSGFGNLLARQLDRRGMRVLAAC 60

Query: 305 LTEAGAQQLKKQTSDRLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLC 484
           LTE GA++L+ +TSDRL  V+LDVTKTES   A QWV+E V  + +WG V+ A    P  
Sbjct: 61  LTEKGAEELRNKTSDRLETVILDVTKTESIVTATQWVKERVGNRGLWGLVNNAGISIPSG 120

Query: 485 IT*WLKNENRIHTLQMELHWCDRSDP*HASPGEKRTREKCPRLPP-LGRVAFFGEIYSYS 661
              W+K ++  H L + L            P  ++ R +   +   LGRV+  G  Y  S
Sbjct: 121 PNEWMKKQDFAHVLDVNLLGLIEVTL-SMLPLVRKARGRVINVASVLGRVSLCGGAYCIS 179

Query: 662 PTGVESLFHIPEMSLINFGWEI 727
             GVE+        L  FG ++
Sbjct: 180 KYGVEAFSDSLRRELSYFGVKV 201


>ref|NP_081577.1| retinol dehydrogenase similar protein [Mus musculus]
          Length = 313

 Score =  123 bits (309), Expect = 2e-28
 Identities = 78/187 (41%), Positives = 106/187 (56%), Gaps = 1/187 (0%)
 Frame = +2

Query: 170 RWYRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEAGAQQLKKQTSD 349
           RW++   +V +L +KYVFITGCDSGFGNLLA+QL  RG++VLAACLTE GAQ+L + TS 
Sbjct: 12  RWFKNCNLVKNLSEKYVFITGCDSGFGNLLAKQLVDRGMKVLAACLTEEGAQKLLQDTSH 71

Query: 350 RLGDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLCIT*WLKNENRIHTLQ 529
           +L   LLDVTK+E+   A QWV + V EQ +W  V+ A    P     WL  ++ +  + 
Sbjct: 72  QLQTFLLDVTKSENVKEAAQWVRDQVGEQGLWALVNNAGVGLPSGPNEWLTIKDFVKVIN 131

Query: 530 MELHWCDRSDP*HASPGEKRTREKCPRLPPL-GRVAFFGEIYSYSPTGVESLFHIPEMSL 706
           + L         +  P  K+ R +   +    GRVA FG  Y  S  GVE+        L
Sbjct: 132 INLVGL-IDVTLNMLPMIKKARGRVVNMSSSGGRVAIFGGGYCVSKFGVEAFSDSIRREL 190

Query: 707 INFGWEI 727
             FG ++
Sbjct: 191 HFFGVKV 197


>ref|NP_780721.1| NADP-dependent retinol dehydrogenase/reductase [Mus musculus]
          Length = 319

 Score =  112 bits (279), Expect = 5e-25
 Identities = 67/168 (39%), Positives = 97/168 (57%), Gaps = 1/168 (0%)
 Frame = +2

Query: 176 YRERQMVSHLGDKYVFITGCDSGFGNLLARQLDVRGLRVLAACLTEAGAQQLKKQTSDRL 355
           Y+ +  ++ + DKYVFITGCD+GFGNL AR  D +G RV+AACLTE+G+  LK +TS+RL
Sbjct: 18  YKGQLKIADIADKYVFITGCDTGFGNLAARTFDKKGFRVIAACLTESGSAALKAKTSERL 77

Query: 356 GDVLLDVTKTESNAAAHQWVEEPVREQRIWGPVHYARTFPPLCIT*WLKNENRIHTLQME 535
             VLLDVT  E+     QWV+  V E+ +WG ++ A     L  T WL  ++    +++ 
Sbjct: 78  HTVLLDVTDPENVKKTAQWVKSHVGEKGLWGLINNAGVLGVLAPTDWLTVDDYREPIEVN 137

Query: 536 LHWCDRSDP*HASPGEKRTREKCPRLPPL-GRVAFFGEIYSYSPTGVE 676
           L         +  P  K+ R +   +  + GR+AF G  Y+ S   VE
Sbjct: 138 LFGLINVTL-NMLPLVKKARGRVINVSSIGGRLAFGGGGYTPSKYAVE 184


  Database: RefSeqMP
    Posted date:  Aug 2, 2006 12:58 AM
  Number of letters in database: 21,768,885
  Number of sequences in database:  45,328
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,294,558
Number of Sequences: 45328
Number of extensions: 1071530
Number of successful extensions: 4172
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 3402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4154
length of database: 21,768,885
effective HSP length: 101
effective length of database: 17,190,757
effective search space used: 2475469008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)