BLASTX 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 20060611S-030165 (1194 letters) Database: RefSeqBP 33,508 sequences; 16,112,626 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Alignment gi|XP_608583.2| PREDICTED: similar to CG7568-PA [Bos taurus] 142 7e-34 Alignment gi|XP_603483.2| PREDICTED: similar to WD repeat domain 51B [Bos... 134 1e-31 Alignment gi|XP_594126.2| PREDICTED: similar to TBP-associated factor 5 [... 134 1e-31 Alignment gi|XP_587553.2| PREDICTED: similar to TAF5-like RNA polymerase ... 125 9e-29 Alignment gi|NP_777088.1| platelet-activating factor acetylhydrolase, iso... 125 9e-29 Alignment gi|XP_582098.2| PREDICTED: similar to TAF5-like RNA polymerase ... 124 2e-28 Alignment gi|XP_603152.1| PREDICTED: similar to TAF5-like RNA polymerase ... 119 4e-27 Alignment gi|NP_001029502.1| hypothetical protein LOC508735 [Bos taurus] 113 3e-25 Alignment gi|NP_001014887.1| Notchless gene homolog [Bos taurus] 113 3e-25 Alignment gi|XP_612428.2| PREDICTED: similar to F-box and WD-40 domain pr... 110 3e-24 >ref|XP_608583.2| PREDICTED: similar to CG7568-PA [Bos taurus] Length = 441 Score = 142 bits (357), Expect = 7e-34 Identities = 76/233 (32%), Positives = 121/233 (51%), Gaps = 1/233 (0%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 F+P L A+ S D T +LWD+ E + L GH + ++SF+ ++ +G +D V Sbjct: 211 FNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVT 270 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEG 534 +WE +G+ + L+GH I S+ F + TGS D T ++WD G L G Sbjct: 271 VWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVA---TLTG 327 Query: 535 HRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLA 711 H I CF G L+A+ S D T I+ +TR + +L+GH + I+F+P G +L Sbjct: 328 HDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLL 387 Query: 712 SAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQARCQV 870 + T ++WD TG+C L+G D SCAF G ++++G+ D C++ Sbjct: 388 TGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNT-CRI 439 Score = 130 bits (328), Expect = 2e-30 Identities = 76/234 (32%), Positives = 115/234 (49%), Gaps = 2/234 (0%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSF-SPDSKQLASG 333 P+ + G F + S D T +LWD A E L L+GH+ V ++F +P ++A+G Sbjct: 120 PLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATG 179 Query: 334 GWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAI 513 +DK LW V++G+ GH I F P S +ATGS D+T ++WD++ G Sbjct: 180 SFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVF 239 Query: 514 FHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFS 690 L GH I L F+ G + +GS+D T+ +W+ T + L GH + S F+ Sbjct: 240 ---TLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFN 296 Query: 691 PDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTAD 852 D + + T K+WD G+C TL G D F GKL+ + +AD Sbjct: 297 WDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASAD 350 Score = 111 bits (277), Expect = 1e-24 Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 2/206 (0%) Frame = +1 Query: 244 KVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSS 423 K +VL+ H + V+ + +G +D+ LW+ SG+ L L GHR+ + + Sbjct: 107 KFYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAI 166 Query: 424 DF-APSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSW 597 F P D +ATGS+D T ++W + TG +H GH I CL F+ L+A+GS Sbjct: 167 AFNNPYGDKIATGSFDKTCKLWSVE--TGKCYH-TFRGHTAEIVCLSFNPQSTLVATGSM 223 Query: 598 DKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTL 777 D T +W + + L GH + S++F+ G ++ + + HTV VW+ +TGR TL Sbjct: 224 DTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTL 283 Query: 778 KGVLDVAHSCAFTPDGKLLVSGTADQ 855 G S F D L+++G+ D+ Sbjct: 284 IGHCAEISSAVFNWDCSLILTGSMDK 309 Score = 86.7 bits (213), Expect = 3e-17 Identities = 41/104 (39%), Positives = 61/104 (58%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 F G+L A+ S+D T R++ A EC+ L+GH+ + +SF+P +L +G DK Sbjct: 337 FDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTAR 396 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMW 486 +W+ Q+GQ L+ L GH D I S F D + TGS D+T R+W Sbjct: 397 IWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 440 >ref|XP_603483.2| PREDICTED: similar to WD repeat domain 51B [Bos taurus] Length = 495 Score = 134 bits (338), Expect = 1e-31 Identities = 73/198 (36%), Positives = 105/198 (53%), Gaps = 3/198 (1%) Frame = +1 Query: 268 KGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDC 447 KGH+ ++ +V FSP+ KQLA+G WD +MLW ++ VGH+D I S F+P + Sbjct: 32 KGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNL 91 Query: 448 LATGSWDSTIRMW--DLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIW 618 LA+ S D TIR+W D RG + E + H + + FSA G LAS S DK+I +W Sbjct: 92 LASASRDRTIRLWIPDKRGKS-----SEFKAHTAPVRSVDFSADGQFLASASEDKSIKVW 146 Query: 619 KPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVA 798 + L L H WV+ FSPDG + S T+K+WD +C + + A Sbjct: 147 NMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFA 206 Query: 799 HSCAFTPDGKLLVSGTAD 852 + AF P+G + S +D Sbjct: 207 NFVAFNPNGTCIASAGSD 224 Score = 107 bits (268), Expect = 1e-23 Identities = 75/265 (28%), Positives = 115/265 (43%), Gaps = 13/265 (4%) Frame = +1 Query: 97 GPRDAGGGESEILLPAPRGGPV------------KFCRFSPDGRLFASTSSDCTIRLWDV 240 GP AGG + + P PV FSP+G+ A+ S D + LW + Sbjct: 5 GPAPAGGDRAPLRPPTFEEDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSL 64 Query: 241 AKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQS 420 GH+ + +V FSP LAS D+ + LW H ++S Sbjct: 65 RPQARAFRYVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRS 124 Query: 421 SDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSW 597 DF+ LA+ S D +I++W++ F L H + C FS G L+ S S Sbjct: 125 VDFSADGQFLASASEDKSIKVWNMYRQR---FLYSLYRHTHWVRCAKFSPDGRLIVSCSE 181 Query: 598 DKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTL 777 DKTI IW + + + V + +AF+P+G +ASAG HTVK+WD + Sbjct: 182 DKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHY 241 Query: 778 KGVLDVAHSCAFTPDGKLLVSGTAD 852 + + +F P G L++ ++D Sbjct: 242 QVHSGGVNCVSFHPSGNYLITASSD 266 Score = 106 bits (265), Expect = 3e-23 Identities = 73/228 (32%), Positives = 104/228 (45%), Gaps = 1/228 (0%) Frame = +1 Query: 172 RFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRV 351 +FSP G L AS S D TIRLW K K H V +V FS D + LAS DK + Sbjct: 84 QFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSI 143 Query: 352 MLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELE 531 +W + + L L H ++ + F+P + + S D TI++WD T Sbjct: 144 KVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT---TNKQCVNNFS 200 Query: 532 GHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQL 708 G + + F+ G +AS D T+ IW LL + H V ++F P G L Sbjct: 201 DFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYL 260 Query: 709 ASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTAD 852 +A T+K+ D GR TL+G + +F+ G+L SG AD Sbjct: 261 ITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGAD 308 Score = 103 bits (257), Expect = 3e-22 Identities = 61/158 (38%), Positives = 86/158 (54%), Gaps = 1/158 (0%) Frame = +1 Query: 385 RHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCF 564 R+ GH+ +I S DF+P+ LATGSWD+ + +W LR A GH+ I+ + F Sbjct: 29 RYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAF---RYVGHKDVITSVQF 85 Query: 565 SAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKV 741 S G LLAS S D+TI +W P R + K H V+S+ FS DG LASA ++KV Sbjct: 86 SPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKV 145 Query: 742 WDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQ 855 W+ R +L F+PDG+L+VS + D+ Sbjct: 146 WNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 183 Score = 95.1 bits (235), Expect = 9e-20 Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 1/200 (0%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGG 336 PV+ FS DG+ AS S D +I++W++ + L L H V FSPD + + S Sbjct: 121 PVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 180 Query: 337 WDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIF 516 DK + +W+ + Q + + F P+ C+A+ D T+++WD+R Sbjct: 181 EDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNK---L 237 Query: 517 HQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSP 693 Q + H G ++C+ F G L + S D T+ I L+ L+GH V +++FS Sbjct: 238 LQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSK 297 Query: 694 DGLQLASAGYSHTVKVWDCN 753 G S G V +W N Sbjct: 298 GGELFTSGGADAQVLLWRTN 317 Score = 62.8 bits (151), Expect = 5e-10 Identities = 30/111 (27%), Positives = 54/111 (48%) Frame = +1 Query: 154 GPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASG 333 G F F+P+G AS SD T+++WD+ + LQ + H V VSF P L + Sbjct: 204 GFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITA 263 Query: 334 GWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMW 486 D + + ++ G+++ L GH + + F+ + +G D+ + +W Sbjct: 264 SSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 314 >ref|XP_594126.2| PREDICTED: similar to TBP-associated factor 5 [Bos taurus] Length = 800 Score = 134 bits (337), Expect = 1e-31 Identities = 82/210 (39%), Positives = 107/210 (50%), Gaps = 2/210 (0%) Frame = +1 Query: 124 SEILLPAPRGGPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSF 303 SE+ + GPV FSPD S+S D T+RLW + CL KGH V F Sbjct: 534 SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQF 593 Query: 304 SPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRM 483 SP SGG D+ LW Q LR GH + + F P+S+ +ATGS D T+R+ Sbjct: 594 SPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 653 Query: 484 WD-LRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKG 657 WD L G IF GH+G I L FS G LA+G+ D + +W ++ +LKG Sbjct: 654 WDVLNGNCVRIF----TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKG 709 Query: 658 HVTWVKSIAFSPDGLQLASAGYSHTVKVWD 747 H V S+ FS DG LAS +TV++WD Sbjct: 710 HTDTVCSLRFSRDGEILASGSMDNTVRLWD 739 Score = 101 bits (252), Expect = 1e-21 Identities = 69/228 (30%), Positives = 99/228 (43%), Gaps = 5/228 (2%) Frame = +1 Query: 184 DGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWE 363 D L S D R+ D L++L GH V SFSPD L S D V LW Sbjct: 512 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS 571 Query: 364 VQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQE----LE 531 +Q+ L GH + + F+P +G D R+W A H + Sbjct: 572 LQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW-------ATDHYQPLRIFA 624 Query: 532 GHRGNISCLCFSA-FGLLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQL 708 GH +++C F +A+GS D+T+ +W + + GH + S+ FSP+G L Sbjct: 625 GHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFL 684 Query: 709 ASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTAD 852 A+ V +WD G LKG D S F+ DG++L SG+ D Sbjct: 685 ATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMD 732 Score = 52.8 bits (125), Expect = 5e-07 Identities = 57/243 (23%), Positives = 83/243 (34%), Gaps = 43/243 (17%) Frame = +1 Query: 253 CLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFA 432 C + + V + DS +A G D V +W V ++ R Q++D + Sbjct: 462 CFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKL-------RSVKQAADLS 514 Query: 433 PSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAF-GLLASGSWDKTI 609 + S D R+ D + + + L GH G + FS L S S D T+ Sbjct: 515 ----LIDKESDDVLERIMDEKTASEL---KILYGHSGPVYGASFSPDRNYLLSSSEDGTV 567 Query: 610 HIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGY---------------------- 723 +W T + LV KGH V FSP G S G+ Sbjct: 568 RLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHL 627 Query: 724 --------------------SHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSG 843 TV++WD G C G HS F+P+G+ L +G Sbjct: 628 ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATG 687 Query: 844 TAD 852 D Sbjct: 688 ATD 690 >ref|XP_587553.2| PREDICTED: similar to TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta) [Bos taurus] Length = 310 Score = 125 bits (313), Expect = 9e-29 Identities = 72/211 (34%), Positives = 102/211 (48%), Gaps = 1/211 (0%) Frame = +1 Query: 154 GPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASG 333 GPV RF D S S D +IR WD+ + +GH V + SP S AS Sbjct: 64 GPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASA 123 Query: 334 GWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAI 513 D+ LW LR GH + F P+S+ LATGS D T+R+W + G Sbjct: 124 SHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSV- 182 Query: 514 FHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFS 690 + GHRG + L FS G LAS D+ + +W ++ +L +L+GH + S+ FS Sbjct: 183 --RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFS 240 Query: 691 PDGLQLASAGYSHTVKVWDCNTGRCTDTLKG 783 PD +ASA ++V+VWD + C+ G Sbjct: 241 PDSSLVASASMDNSVRVWDIRSSHCSTPADG 271 Score = 98.2 bits (243), Expect = 1e-20 Identities = 67/216 (31%), Positives = 98/216 (45%), Gaps = 6/216 (2%) Frame = +1 Query: 256 LQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAP 435 ++VL+GH V + F DS L S D + W++ S GH + D +P Sbjct: 56 MKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISP 115 Query: 436 SSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSA-FGLLASGSWDKTIH 612 S A+ S D T R+W + GH ++ C+ F LA+GS DKT+ Sbjct: 116 HSLYFASASHDRTARLWSFDRTYPLRIYA---GHLADVDCVKFHPNSNYLATGSTDKTVR 172 Query: 613 IWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLD 792 +W + + GH V S+AFSP+G LASAG +K+WD +G L+G D Sbjct: 173 LWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTD 232 Query: 793 VAHSCAFTPDGKLLVSGTADQA-----RCQVHCKSP 885 S F+PD L+ S + D + HC +P Sbjct: 233 NITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTP 268 Score = 95.9 bits (237), Expect = 6e-20 Identities = 49/145 (33%), Positives = 82/145 (56%), Gaps = 8/145 (5%) Frame = +1 Query: 172 RFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRV 351 +F P+ A+ S+D T+RLW + +++ GH+ V +++FSP+ K LAS G D+R+ Sbjct: 154 KFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRL 213 Query: 352 MLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRG--------GTG 507 LW++ SG + + L GH D+I S F+P S +A+ S D+++R+WD+R G+ Sbjct: 214 KLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSS 273 Query: 508 AIFHQELEGHRGNISCLCFSAFGLL 582 + G N+ + F A LL Sbjct: 274 SELVGVYTGQMSNVLSVQFMACNLL 298 >ref|NP_777088.1| platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit (45kD) [Bos taurus] Length = 410 Score = 125 bits (313), Expect = 9e-29 Identities = 76/248 (30%), Positives = 114/248 (45%), Gaps = 21/248 (8%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 F G+L AS S+D TI+LWD EC++ + GH +V +V+ P+ + S DK + Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEG 534 +WEVQ+G ++ GHR+ ++ +A+ S D T+R+W + EL Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV---ATKECKAELRE 274 Query: 535 HRGNISCLCFS----------AFG-----------LLASGSWDKTIHIWKPSTRSLLVQL 651 H + C+ ++ A G L SGS DKTI +W ST L+ L Sbjct: 275 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334 Query: 652 KGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKL 831 GH WV+ + F G + S T++VWD RC TL S F Sbjct: 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 394 Query: 832 LVSGTADQ 855 +V+G+ DQ Sbjct: 395 VVTGSVDQ 402 Score = 114 bits (285), Expect = 2e-25 Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 21/254 (8%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGG 336 PV F P + S S D TI++WD + + LKGH SVE +SF K LAS Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCS 169 Query: 337 WDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIF 516 D + LW+ Q + +R + GH ++ S P+ D + + S D TI+MW+++ G Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV-- 227 Query: 517 HQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSP 693 + GHR + + + G L+AS S D+T+ +W +T+ +L+ H V+ I+++P Sbjct: 228 -KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286 Query: 694 D--------------------GLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAF 813 + G L S T+K+WD +TG C TL G + F Sbjct: 287 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF 346 Query: 814 TPDGKLLVSGTADQ 855 GK ++S D+ Sbjct: 347 HSGGKFILSCADDK 360 Score = 96.7 bits (239), Expect = 3e-20 Identities = 58/187 (31%), Positives = 88/187 (47%), Gaps = 1/187 (0%) Frame = +1 Query: 265 LKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSD 444 L GH+ V V F P + S D + +W+ ++G R L GH DS++ F S Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163 Query: 445 CLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWK 621 LA+ S D TI++WD +G + + GH N+S + G + S S DKTI +W+ Sbjct: 164 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220 Query: 622 PSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAH 801 T + GH WV+ + + DG +AS TV+VW T C L+ V Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280 Query: 802 SCAFTPD 822 ++ P+ Sbjct: 281 CISWAPE 287 Score = 67.4 bits (163), Expect = 2e-11 Identities = 34/103 (33%), Positives = 54/103 (52%) Frame = +1 Query: 187 GRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEV 366 G S S D TI++WDV+ CL L GH V V F K + S DK + +W+ Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 Query: 367 QSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLR 495 ++ + ++ L H + S DF ++ + TGS D T+++W+ R Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 >ref|XP_582098.2| PREDICTED: similar to TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta) [Bos taurus] Length = 577 Score = 124 bits (310), Expect = 2e-28 Identities = 78/235 (33%), Positives = 111/235 (47%), Gaps = 3/235 (1%) Frame = +1 Query: 88 EQRGPRDAGGGESEILLPAPRG--GPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQ 261 E+ D G E ++L RG GPV RF D S S D +IR WD+ Sbjct: 311 EEDDEDDNAGTEMKVL----RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTV 366 Query: 262 VLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSS 441 + +GH V + SP S ASG D+ LW LR GH + F P+S Sbjct: 367 LYQGHAYPVWDLDISPHSLYFASGSHDRTARLWSFDRTYPLRIFAGHLADVDCVKFHPNS 426 Query: 442 DCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIW 618 + LATGS D T+R+W + G + GHRG + L FS LAS D+ + +W Sbjct: 427 NYLATGSTDKTVRLWSTQQGNSV---RLFTGHRGPVLSLAFSPNSKYLASAGEDQRLKLW 483 Query: 619 KPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKG 783 ++ +L +L+GH + S+ FS D +ASA ++V+VWD + C+ G Sbjct: 484 DLASGTLYKELRGHTDSITSLTFSSDSSLIASASMDNSVRVWDIRSTHCSTPADG 538 Score = 97.8 bits (242), Expect = 1e-20 Identities = 69/217 (31%), Positives = 99/217 (45%), Gaps = 7/217 (3%) Frame = +1 Query: 256 LQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAP 435 ++VL+GH V + F DS L S D + W++ S GH + D +P Sbjct: 323 MKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISP 382 Query: 436 SSDCLATGSWDSTIRMWDL-RGGTGAIFHQELEGHRGNISCLCFSA-FGLLASGSWDKTI 609 S A+GS D T R+W R IF GH ++ C+ F LA+GS DKT+ Sbjct: 383 HSLYFASGSHDRTARLWSFDRTYPLRIF----AGHLADVDCVKFHPNSNYLATGSTDKTV 438 Query: 610 HIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVL 789 +W + + GH V S+AFSP+ LASAG +K+WD +G L+G Sbjct: 439 RLWSTQQGNSVRLFTGHRGPVLSLAFSPNSKYLASAGEDQRLKLWDLASGTLYKELRGHT 498 Query: 790 DVAHSCAFTPDGKLLVSGTADQA-----RCQVHCKSP 885 D S F+ D L+ S + D + HC +P Sbjct: 499 DSITSLTFSSDSSLIASASMDNSVRVWDIRSTHCSTP 535 >ref|XP_603152.1| PREDICTED: similar to TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta) [Bos taurus] Length = 600 Score = 119 bits (299), Expect = 4e-27 Identities = 76/246 (30%), Positives = 112/246 (45%), Gaps = 12/246 (4%) Frame = +1 Query: 154 GPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASG 333 GPV RF PD S S D +IR WD+ + +GH V + SP S AS Sbjct: 354 GPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSLFFASA 413 Query: 334 GWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAI 513 +D LW LR GH + F P+S+ LATGS D T+R+W + G Sbjct: 414 SYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSV- 472 Query: 514 FHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFS 690 + GH G + CL FS G L S D+ + +W ++ +L L GH + S+ FS Sbjct: 473 --RLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFS 530 Query: 691 PDGLQLASAGYSHTVKVWDCNT--------GRCTDTL---KGVLDVAHSCAFTPDGKLLV 837 D +ASA ++V++WD + G ++ L G + + F +LLV Sbjct: 531 LDSSVIASASMDNSVRIWDIKSKHNSTPADGSSSELLGVYTGQMSTVLNVQFMAGSRLLV 590 Query: 838 SGTADQ 855 +G ++ Sbjct: 591 TGIREE 596 Score = 98.6 bits (244), Expect = 9e-21 Identities = 71/257 (27%), Positives = 110/257 (42%), Gaps = 30/257 (11%) Frame = +1 Query: 178 SPDGRLFASTSSDCTIRLW-------------DVAKVECL----------------QVLK 270 SPD +L A+ ++ +I+LW DV+ + + +VL Sbjct: 291 SPDNKLLATGLNNSSIKLWSLTSKFKSKPHQIDVSHIHLINDTLEVDEEDRTATERKVLL 350 Query: 271 GHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCL 450 GH V + F PDS L S D + W+++S GH + D +P S Sbjct: 351 GHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHSLFF 410 Query: 451 ATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSA-FGLLASGSWDKTIHIWKPS 627 A+ S+D T R+W + GH + C+ F LA+GS DKT+ +W Sbjct: 411 ASASYDHTARLWSFDRTYPLRIYA---GHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQ 467 Query: 628 TRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSC 807 + + GH V+ +AFSP+G L SAG +K+WD +G L G D S Sbjct: 468 QGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSV 527 Query: 808 AFTPDGKLLVSGTADQA 858 F+ D ++ S + D + Sbjct: 528 TFSLDSSVIASASMDNS 544 >ref|NP_001029502.1| hypothetical protein LOC508735 [Bos taurus] Length = 521 Score = 113 bits (283), Expect = 3e-25 Identities = 73/242 (30%), Positives = 110/242 (45%), Gaps = 10/242 (4%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSK------ 318 P+ +C FSP+ ++ A+ +LW V L L+GH +V + F P S Sbjct: 232 PISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQK 291 Query: 319 --QLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDL 492 LAS D V LW + S + + + GH + + PS L T +D + R+WDL Sbjct: 292 DVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDL 351 Query: 493 RGGTGAIFHQELEGHRGNISCLCFSAFGLLA-SGSWDKTIHIWKPSTRSLLVQLKGHVTW 669 I HQ EGH + + F G LA +G D +W T ++ L+GH+ Sbjct: 352 E-AQEEILHQ--EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKE 408 Query: 670 VKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTP-DGKLLVSGT 846 + I FSP+G +A+ +T KVWD RC T+ ++ F P G L++G Sbjct: 409 IYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGA 468 Query: 847 AD 852 D Sbjct: 469 YD 470 Score = 99.0 bits (245), Expect = 7e-21 Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 2/190 (1%) Frame = +1 Query: 181 PDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLW 360 P GR +T D + RLWD+ E + +GH V ++F D +GG D +W Sbjct: 332 PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVW 391 Query: 361 EVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHR 540 ++++G+ + L GH I +F+P+ +ATGS D+T ++WDLR + H+ Sbjct: 392 DLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCV---YTIPAHQ 448 Query: 541 GNISCLCFSAF--GLLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLAS 714 ++ + F L +G++D T IW S L L GH V + S DG +A+ Sbjct: 449 NLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIAT 508 Query: 715 AGYSHTVKVW 744 Y T K+W Sbjct: 509 CSYDRTFKLW 518 Score = 92.0 bits (227), Expect = 8e-19 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 2/221 (0%) Frame = +1 Query: 199 ASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQ 378 AS ++D +++LW + E + ++GH V V++ P + L + +D+ LW++++ + Sbjct: 296 ASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQE 355 Query: 379 VLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCL 558 + H GH + F TG D+ R+WDLR G +F LEGH I + Sbjct: 356 EILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMF---LEGHLKEIYGI 412 Query: 559 CFSAFGL-LASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSP-DGLQLASAGYSHT 732 FS G +A+GS D T +W R + + H V + F P G L + Y +T Sbjct: 413 NFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNT 472 Query: 733 VKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQ 855 K+W TL G + DG+L+ + + D+ Sbjct: 473 AKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDR 513 Score = 91.3 bits (225), Expect = 1e-18 Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 9/215 (4%) Frame = +1 Query: 253 CLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFA 432 C Q+ G R + FSP+SK LA+ W LW V +L L GH ++ + F Sbjct: 224 CSQI--GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFH 281 Query: 433 PSSDC--------LATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLA 585 P S LA+ + D ++++W L ++EGH ++ + + G L Sbjct: 282 PKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPV---ADIEGHTVRVARVTWHPSGRFLG 338 Query: 586 SGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRC 765 + +D++ +W + ++ +GH V IAF DG + G +VWD TGRC Sbjct: 339 TTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRC 398 Query: 766 TDTLKGVLDVAHSCAFTPDGKLLVSGTADQARCQV 870 L+G L + F+P+G + +G+ D C+V Sbjct: 399 IMFLEGHLKEIYGINFSPNGYHIATGSGDNT-CKV 432 Score = 79.0 bits (193), Expect = 7e-15 Identities = 42/150 (28%), Positives = 79/150 (52%), Gaps = 2/150 (1%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 F DG L + D R+WD+ C+ L+GH + + ++FSP+ +A+G D Sbjct: 372 FHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCK 431 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAP-SSDCLATGSWDSTIRMWDLRGGTGAIFHQELE 531 +W+++ + + + H++ + F P + L TG++D+T ++W G + + L Sbjct: 432 VWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPL---KTLA 488 Query: 532 GHRGNISCLCFSAFG-LLASGSWDKTIHIW 618 GH G + L S+ G L+A+ S+D+T +W Sbjct: 489 GHEGKVMGLDISSDGQLIATCSYDRTFKLW 518 >ref|NP_001014887.1| Notchless gene homolog [Bos taurus] Length = 486 Score = 113 bits (283), Expect = 3e-25 Identities = 66/180 (36%), Positives = 102/180 (56%), Gaps = 6/180 (3%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 FSP G+ AS S D T+R WD++ +GH+ V ++S+SPD K+LASG + +++ Sbjct: 123 FSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQIL 182 Query: 355 LWEVQSG-QVLRHLVGHRDSIQSSDFAP---SSDC--LATGSWDSTIRMWDLRGGTGAIF 516 LW+ +G QV R L GH I + + P + +C +A+ S D ++R+WD G Sbjct: 183 LWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGR---C 239 Query: 517 HQELEGHRGNISCLCFSAFGLLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPD 696 + L GH +++CL + GLL S S D+TI +W+ L L+GH WV ++A S D Sbjct: 240 ERTLTGHAQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 299 Score = 100 bits (249), Expect = 2e-21 Identities = 75/269 (27%), Positives = 120/269 (44%), Gaps = 43/269 (15%) Frame = +1 Query: 178 SPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVML 357 +P+ R AS+S D ++R+WD C + L GH +SV + + D L S D+ + + Sbjct: 214 NPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGL-LYSASQDRTIKV 272 Query: 358 WEVQSGQVLRHLVGHRDSIQSSDFAPSSD-CLATGSWD---STIRMWDLRGGTGAIFHQE 525 W G + R L GH + + A S+D L TG+++ +++ DLRG + + Sbjct: 273 WRAHDGVLCRTLQGHGHWVNT--MALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERA 330 Query: 526 LE--------------------------------------GHRGNISCLCFSAFG-LLAS 588 L GH+ I+ + FS ++AS Sbjct: 331 LSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIAS 390 Query: 589 GSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCT 768 S+DK+I +W T L L+GHV V IA+S D L S T+KVWD + + Sbjct: 391 ASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLS 450 Query: 769 DTLKGVLDVAHSCAFTPDGKLLVSGTADQ 855 L G D ++ ++PDG+ + SG D+ Sbjct: 451 TDLPGHADEVYAVDWSPDGQRVASGGKDK 479 Score = 86.7 bits (213), Expect = 3e-17 Identities = 66/224 (29%), Positives = 100/224 (44%), Gaps = 6/224 (2%) Frame = +1 Query: 241 AKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQS 420 A C L+GH +V +V+FSP K LASG D V W++ + GHR + S Sbjct: 103 AVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLS 162 Query: 421 SDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAF------GLL 582 ++P LA+G + I +WD TG + L GH I+ L + + Sbjct: 163 ISWSPDGKKLASGCKNGQILLWD--PSTGKQVGRALTGHSKWITALSWEPLHANPECRYV 220 Query: 583 ASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGR 762 AS S D ++ +W + L GH V + + DGL L SA T+KVW + G Sbjct: 221 ASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGL-LYSASQDRTIKVWRAHDGV 279 Query: 763 CTDTLKGVLDVAHSCAFTPDGKLLVSGTADQARCQVHCKSPRAA 894 TL+G ++ A + D L +G + A V+ + R + Sbjct: 280 LCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEASVNAQDLRGS 322 Score = 86.3 bits (212), Expect = 4e-17 Identities = 64/235 (27%), Positives = 101/235 (42%), Gaps = 44/235 (18%) Frame = +1 Query: 172 RFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPD------------- 312 R+ DG L+ S S D TI++W + L+GH V T++ S D Sbjct: 254 RWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEA 312 Query: 313 -----------------------------SKQLASGGWDKRVMLWE-VQSGQVLRHLVGH 402 ++L SG D + LW + + L + GH Sbjct: 313 SVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGH 372 Query: 403 RDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-L 579 + I F+P S +A+ S+D +I++WD R G + L GH + + +SA L Sbjct: 373 QALINQVVFSPDSRVIASASFDKSIKLWDGRTGK---YLASLRGHVAAVYQIAWSADSRL 429 Query: 580 LASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVW 744 L SGS D T+ +W + L L GH V ++ +SPDG ++AS G +++W Sbjct: 430 LVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484 Score = 83.6 bits (205), Expect = 3e-16 Identities = 49/142 (34%), Positives = 79/142 (55%), Gaps = 2/142 (1%) Frame = +1 Query: 202 STSSDCTIRLWDVAK-VECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQ 378 S S D T+ LW A+ + L + GHQ + V FSPDS+ +AS +DK + LW+ ++G+ Sbjct: 347 SGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGK 406 Query: 379 VLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCL 558 L L GH ++ ++ S L +GS DST+++WD++ +L GH + + Sbjct: 407 YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK---LSTDLPGHADEVYAV 463 Query: 559 CFSAFGL-LASGSWDKTIHIWK 621 +S G +ASG DK + IW+ Sbjct: 464 DWSPDGQRVASGGKDKCLRIWR 485 Score = 63.5 bits (153), Expect = 3e-10 Identities = 47/150 (31%), Positives = 69/150 (46%), Gaps = 2/150 (1%) Frame = +1 Query: 526 LEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGL 702 LEGH + + FS G LASGS D T+ W ST + +GH WV SI++SPDG Sbjct: 111 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 170 Query: 703 QLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQARCQVHCK- 879 +LAS + + +WD +TG+ A T K + + + + C+ Sbjct: 171 KLASGCKNGQILLWDPSTGKQVGR-----------ALTGHSKWITALSWEPLHANPECRY 219 Query: 880 SPRAAQDNITRMGQIPVGRDCHSPLPGAAQ 969 +++D R+ GR C L G AQ Sbjct: 220 VASSSKDGSVRVWDTTAGR-CERTLTGHAQ 248 >ref|XP_612428.2| PREDICTED: similar to F-box and WD-40 domain protein 11 isoform 1 [Bos taurus] Length = 563 Score = 110 bits (274), Expect = 3e-24 Identities = 68/223 (30%), Positives = 111/223 (49%) Frame = +1 Query: 184 DGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWE 363 D S D +I++WD +ECL+VL GH SV + + D + + +G D V +W+ Sbjct: 270 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTVRVWD 327 Query: 364 VQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRG 543 V +G+VL L+ H +++ F S+ + T S D +I +WD+ T + L GHR Sbjct: 328 VNTGEVLNTLIHHNEAVLHLRF--SNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 385 Query: 544 NISCLCFSAFGLLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGY 723 ++ + F + S S D+TI +W ST + L GH + + + D L + S Sbjct: 386 AVNVVDFDD-KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR-DRL-VVSGSS 442 Query: 724 SHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTAD 852 +T+++WD G C L+G ++ F D K +VSG D Sbjct: 443 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYD 483 Score = 90.1 bits (222), Expect = 3e-18 Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 3/191 (1%) Frame = +1 Query: 184 DGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWE 363 D R+ + SSD T+R+WDV E L L H +V + FS + + + D+ + +W+ Sbjct: 310 DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWD 367 Query: 364 VQSG---QVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEG 534 + S + R LVGHR ++ DF + + S D TI++W + F + L G Sbjct: 368 MASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWST---STCEFVRTLNG 422 Query: 535 HRGNISCLCFSAFGLLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLAS 714 H+ I+CL + L+ SGS D TI +W + L L+GH V+ I F D ++ S Sbjct: 423 HKRGIACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVS 479 Query: 715 AGYSHTVKVWD 747 Y +KVWD Sbjct: 480 GAYDGKIKVWD 490 Score = 65.5 bits (158), Expect = 8e-11 Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 9/109 (8%) Frame = +1 Query: 190 RLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQ 369 RL S SSD TIRLWD+ CL+VL+GH+ V + F D+K++ SG +D ++ +W++Q Sbjct: 435 RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQ 492 Query: 370 ---------SGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWD 489 S LR LV H + F + + S D TI +WD Sbjct: 493 AALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ--IISSSHDDTILIWD 539 Database: RefSeqBP Posted date: Aug 1, 2006 7:14 PM Number of letters in database: 16,112,626 Number of sequences in database: 33,508 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,606,495 Number of Sequences: 33508 Number of extensions: 1498596 Number of successful extensions: 9176 Number of sequences better than 1.0e-05: 10 Number of HSP's better than 0.0 without gapping: 4912 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7302 length of database: 16,112,626 effective HSP length: 104 effective length of database: 12,627,794 effective search space used: 3699943642 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
Search to RefSeqSP
BLASTX 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 20060611S-030165 (1194 letters) Database: RefSeqSP 1040 sequences; 434,620 total letters Searching...done Score E Sequences producing significant alignments: (bits) Value Alignment gi|NP_999415.1| platelet-activating factor acetylhydrolase Ib-a... 125 3e-30 Alignment gi|NP_999497.1| G-beta like protein [Sus scrofa] 110 9e-26 Alignment gi|NP_001012296.1| fizzy/cell division cycle 20 related 1 [Sus ... 67 1e-12 >ref|NP_999415.1| platelet-activating factor acetylhydrolase Ib-alpha subunit [Sus scrofa] Length = 410 Score = 125 bits (313), Expect = 3e-30 Identities = 76/248 (30%), Positives = 114/248 (45%), Gaps = 21/248 (8%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 F G+L AS S+D TI+LWD EC++ + GH +V +V+ P+ + S DK + Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIK 217 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEG 534 +WEVQ+G ++ GHR+ ++ +A+ S D T+R+W + EL Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV---ATKECKAELRE 274 Query: 535 HRGNISCLCFS----------AFG-----------LLASGSWDKTIHIWKPSTRSLLVQL 651 H + C+ ++ A G L SGS DKTI +W ST L+ L Sbjct: 275 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334 Query: 652 KGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKL 831 GH WV+ + F G + S T++VWD RC TL S F Sbjct: 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 394 Query: 832 LVSGTADQ 855 +V+G+ DQ Sbjct: 395 VVTGSVDQ 402 Score = 112 bits (279), Expect = 2e-26 Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 21/254 (8%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGG 336 PV F P + S S D TI++WD + + LKGH SV+ +SF K LAS Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS 169 Query: 337 WDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIF 516 D + LW+ Q + +R + GH ++ S P+ D + + + D TI+MW+++ G Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCV-- 227 Query: 517 HQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSP 693 + GHR + + + G L+AS S D+T+ +W +T+ +L+ H V+ I+++P Sbjct: 228 -KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286 Query: 694 D--------------------GLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAF 813 + G L S T+K+WD +TG C TL G + F Sbjct: 287 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF 346 Query: 814 TPDGKLLVSGTADQ 855 GK ++S D+ Sbjct: 347 HSGGKFILSCADDK 360 Score = 96.7 bits (239), Expect = 1e-21 Identities = 58/187 (31%), Positives = 88/187 (47%), Gaps = 1/187 (0%) Frame = +1 Query: 265 LKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSD 444 L GH+ V V F P + S D + +W+ ++G R L GH DS+Q F S Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163 Query: 445 CLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWK 621 LA+ S D TI++WD +G + + GH N+S + G + S + DKTI +W+ Sbjct: 164 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWE 220 Query: 622 PSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAH 801 T + GH WV+ + + DG +AS TV+VW T C L+ V Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280 Query: 802 SCAFTPD 822 ++ P+ Sbjct: 281 CISWAPE 287 Score = 67.4 bits (163), Expect = 6e-13 Identities = 34/103 (33%), Positives = 54/103 (52%) Frame = +1 Query: 187 GRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEV 366 G S S D TI++WDV+ CL L GH V V F K + S DK + +W+ Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 Query: 367 QSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLR 495 ++ + ++ L H + S DF ++ + TGS D T+++W+ R Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 Score = 48.5 bits (114), Expect = 3e-07 Identities = 28/68 (41%), Positives = 34/68 (50%) Frame = +1 Query: 649 LKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGK 828 L GH + V + F P + SA T+KVWD TG TLKG D +F GK Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163 Query: 829 LLVSGTAD 852 LL S +AD Sbjct: 164 LLASCSAD 171 Score = 45.1 bits (105), Expect = 3e-06 Identities = 18/63 (28%), Positives = 32/63 (50%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 F G+ S + D T+R+WD C++ L H+ V ++ F + + +G D+ V Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405 Query: 355 LWE 363 +WE Sbjct: 406 VWE 408 >ref|NP_999497.1| G-beta like protein [Sus scrofa] Length = 317 Score = 110 bits (274), Expect = 9e-26 Identities = 67/226 (29%), Positives = 108/226 (47%), Gaps = 8/226 (3%) Frame = +1 Query: 193 LFASTSSDCTIRLWDVAKVEC-----LQVLKGHQRSVETVSFSPDSKQLASGGWDKRVML 357 + S S D TI +W + + E + L+GH V V S D + SG WD + L Sbjct: 30 MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 89 Query: 358 WEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGH 537 W++ +G R VGH + S F+ + + +GS D TI++W+ G + + E H Sbjct: 90 WDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG--VCKYTVQDESH 147 Query: 538 RGNISCLCF---SAFGLLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQL 708 +SC+ F S+ ++ S WDK + +W + L GH ++ ++ SPDG Sbjct: 148 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLC 207 Query: 709 ASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGT 846 AS G +WD N G+ TL G D+ ++ F+P+ L + T Sbjct: 208 ASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYWLCAAT 252 Score = 83.6 bits (205), Expect = 9e-18 Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 15/267 (5%) Frame = +1 Query: 178 SPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVML 357 S DG+ S S D T+RLWD+ + GH + V +V+FS D++Q+ SG DK + L Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 131 Query: 358 WEVQSGQVLRHLV---GHRDSIQSSDFAPSSD--CLATGSWDSTIRMWDLRGGTGAIFHQ 522 W V ++ V H + + F+P+S + + WD +++W+L H Sbjct: 132 WNTLG--VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH- 188 Query: 523 ELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDG 699 GH G ++ + S G L ASG D +W + L L G + ++ FSP+ Sbjct: 189 --IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNR 245 Query: 700 LQLASAGYSHTVKVWDCNTGRCTDTLK-GVLDVAH--------SCAFTPDGKLLVSGTAD 852 L +A ++K+WD D LK V+ + S A++ DG+ L +G Sbjct: 246 YWLCAA-TGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT- 303 Query: 853 QARCQVHCKSPRAAQDNITRMGQIPVG 933 DN+ R+ Q+ +G Sbjct: 304 ---------------DNLVRVWQVTIG 315 Score = 54.7 bits (130), Expect = 4e-09 Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 7/117 (5%) Frame = +1 Query: 526 LEGHRGNISCLCFSAF--GLLASGSWDKTIHIWK---PSTRSLLVQ--LKGHVTWVKSIA 684 L+GH G ++ + + ++ S S DKTI +WK T + Q L+GH +V + Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70 Query: 685 FSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQ 855 S DG S + T+++WD TG T G S AF+ D + +VSG+ D+ Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK 127 >ref|NP_001012296.1| fizzy/cell division cycle 20 related 1 [Sus scrofa] Length = 493 Score = 66.6 bits (161), Expect = 1e-12 Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 8/243 (3%) Frame = +1 Query: 151 GGPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLAS 330 G V +S G L A + +++WD A + L +L+GH V ++++ D QL+S Sbjct: 229 GDSVTSVGWSERGNLVAVGTHKGFVQIWDAAAGKKLSMLEGHTARVGALAWNAD--QLSS 286 Query: 331 GGWDKRVMLWEVQSG--QVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGT 504 G D+ ++ ++++ Q R L GHR + ++ LA+G D+ + +W+ + Sbjct: 287 GSRDRMILQRDIRTPPLQSERRLQGHRQEVCGLKWSTDHQLLASGGNDNKLLVWNHSSLS 346 Query: 505 GAIFHQELEGHRGNISCLCFS--AFGLLAS--GSWDKTIHIWKPSTRSLLVQLKGHVTWV 672 Q+ H + + +S GLLAS G+ D+ I W T L Q + V Sbjct: 347 PV---QQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPL-QCIDTGSQV 402 Query: 673 KSIAFSPDGLQLASA-GYS-HTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGT 846 ++A+S +L S GYS + + VW + L G A +PDG+ +V+G Sbjct: 403 CNLAWSKHANELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGA 462 Query: 847 ADQ 855 D+ Sbjct: 463 GDE 465 Score = 54.7 bits (130), Expect = 4e-09 Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 8/169 (4%) Frame = +1 Query: 265 LKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSD 444 L+GH++ V + +S D + LASGG D ++++W S ++ H ++++ ++P Sbjct: 309 LQGHRQEVCGLKWSTDHQLLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQH 368 Query: 445 CLAT---GSWDSTIRMWDLRGGTGAIFHQELEG-HRGNISC-LCFSAFG---LLASGSWD 600 L G+ D IR W+ G Q L+ G+ C L +S + G Sbjct: 369 GLLASGGGTADRCIRFWNTLTG------QPLQCIDTGSQVCNLAWSKHANELVSTHGYSQ 422 Query: 601 KTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWD 747 I +WK + + + +L GH V +A SPDG + + T++ W+ Sbjct: 423 NQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWN 471 Database: RefSeqSP Posted date: Aug 1, 2006 7:14 PM Number of letters in database: 434,620 Number of sequences in database: 1040 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,283,208 Number of Sequences: 1040 Number of extensions: 37688 Number of successful extensions: 166 Number of sequences better than 1.0e-05: 3 Number of HSP's better than 0.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 135 length of database: 434,620 effective HSP length: 79 effective length of database: 352,460 effective search space used: 112082280 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
Search to RefSeqHP
BLASTX 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 20060611S-030165 (1194 letters) Database: RefSeqHP 39,411 sequences; 17,774,539 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Alignment gi|XP_947007.1| PREDICTED: similar to CG7704-PA isoform 1 [Homo... 418 e-121 Alignment gi|XP_934992.1| PREDICTED: similar to CG7704-PA isoform 1 [Homo... 414 e-120 Alignment gi|XP_950627.1| PREDICTED: similar to WD repeat domain 51A isof... 278 7e-75 Alignment gi|XP_939160.1| PREDICTED: similar to WD repeat domain 51A isof... 274 1e-73 Alignment gi|NP_849143.1| hypothetical protein LOC164781 [Homo sapiens] 145 7e-35 Alignment gi|NP_005877.2| katanin p80 subunit B 1 [Homo sapiens] 138 1e-32 Alignment gi|NP_008882.2| TBP-associated factor 5 [Homo sapiens] 134 2e-31 Alignment gi|NP_055224.1| PCAF associated factor 65 beta isoform a [Homo ... 125 5e-29 Alignment gi|NP_061942.2| WD repeat domain 5B [Homo sapiens] 125 7e-29 Alignment gi|NP_000421.1| platelet-activating factor acetylhydrolase, iso... 125 9e-29 >ref|XP_947007.1| PREDICTED: similar to CG7704-PA isoform 1 [Homo sapiens] Length = 315 Score = 418 bits (1075), Expect(2) = e-121 Identities = 201/251 (80%), Positives = 222/251 (88%), Gaps = 3/251 (1%) Frame = +1 Query: 154 GPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASG 333 GPVKFCRFSPDG LFAS S DCT+RLWDVA+ +CL+VLKGHQRSVETVSFSPDS+QLASG Sbjct: 64 GPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASG 123 Query: 334 GWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAI 513 GWDKRVMLW+VQSGQ+LR LVGHRDSIQSSDF+P+ +CLATGSWDST+R+WDLR T A+ Sbjct: 124 GWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVRIWDLRMVTPAV 183 Query: 514 FHQELEGHRGNISCLCFSAFGLLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSP 693 HQ LEGH GNISCLC+SA GLLASGSWDKTIHIWKP+T SLL+QLKGHVTWVKSIAFSP Sbjct: 184 SHQALEGHSGNISCLCYSASGLLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSP 243 Query: 694 DGLQLASAGYSHTVKVWDCNTGRCTDTLK-GVLDVAHSCAFTPDGKLLVSGTADQARCQV 870 D L LASAGYS VKVWDCNTG+C +TLK GVLDVAH+CAFTPDGK+LVSG ADQ R Q+ Sbjct: 244 DELWLASAGYSRMVKVWDCNTGKCLETLKQGVLDVAHTCAFTPDGKILVSGAADQTRRQI 303 Query: 871 H--CKSPRAAQ 897 KSPR Q Sbjct: 304 SRTSKSPRDPQ 314 Score = 98.6 bits (244), Expect = 9e-21 Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 1/159 (0%) Frame = +1 Query: 274 HQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLA 453 H V + +FSPD + L +G D V WE +SGQ+L L GH ++ F+P A Sbjct: 20 HGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFA 79 Query: 454 TGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPST 630 + S D T+R+WD+ A + L+GH+ ++ + FS LASG WDK + +W + Sbjct: 80 SASCDCTVRLWDV---ARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQS 136 Query: 631 RSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWD 747 +L L GH ++S FSP LA+ + TV++WD Sbjct: 137 GQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVRIWD 175 Score = 68.9 bits (167), Expect = 8e-12 Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 1/108 (0%) Frame = +1 Query: 535 HRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLA 711 H G ++ FS G +L +GS D ++ W+ + LL +L GH VK FSPDG A Sbjct: 20 HGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFA 79 Query: 712 SAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQ 855 SA TV++WD +C LKG + +F+PD + L SG D+ Sbjct: 80 SASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDK 127 Score = 35.8 bits (81), Expect(2) = e-121 Identities = 16/23 (69%), Positives = 18/23 (78%) Frame = +2 Query: 86 MNSGAPGTLAVGRVKFYCRHRGE 154 MNSG P TLAV RVKF+ +H GE Sbjct: 1 MNSGVPATLAVRRVKFFGQHGGE 23 >ref|XP_934992.1| PREDICTED: similar to CG7704-PA isoform 1 [Homo sapiens] Length = 315 Score = 414 bits (1064), Expect(2) = e-120 Identities = 199/251 (79%), Positives = 220/251 (87%), Gaps = 3/251 (1%) Frame = +1 Query: 154 GPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASG 333 GPVKFCRFSPDG LFAS S DCT+RLWDVA+ +CL+VLKGHQRSVETVSFSPDS+QLASG Sbjct: 64 GPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASG 123 Query: 334 GWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAI 513 GWDKRVMLW+VQSGQ+LR LVGHRDSIQSSDF+P+ +CLATGSWDST+ +WDLR T A+ Sbjct: 124 GWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAV 183 Query: 514 FHQELEGHRGNISCLCFSAFGLLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSP 693 HQ LEGH NISCLC+SA GLLASGSWDKTIHIWKP+T SLL+QLKGHVTWVKSIAFSP Sbjct: 184 SHQALEGHSANISCLCYSASGLLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSP 243 Query: 694 DGLQLASAGYSHTVKVWDCNTGRCTDTLK-GVLDVAHSCAFTPDGKLLVSGTADQARCQV 870 D L LASAGYS VKVWDCNTG+C +TLK GVLDVAH+CAFTPDGK+LVSG ADQ R Q+ Sbjct: 244 DELWLASAGYSRMVKVWDCNTGKCLETLKQGVLDVAHTCAFTPDGKILVSGAADQTRRQI 303 Query: 871 H--CKSPRAAQ 897 KSPR Q Sbjct: 304 SRTSKSPRDPQ 314 Score = 97.4 bits (241), Expect = 2e-20 Identities = 56/159 (35%), Positives = 84/159 (52%), Gaps = 1/159 (0%) Frame = +1 Query: 274 HQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLA 453 H V + +FSPD + L +G D V WE +SGQ+L L GH ++ F+P A Sbjct: 20 HGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFA 79 Query: 454 TGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPST 630 + S D T+R+WD+ A + L+GH+ ++ + FS LASG WDK + +W + Sbjct: 80 SASCDCTVRLWDV---ARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQS 136 Query: 631 RSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWD 747 +L L GH ++S FSP LA+ + TV +WD Sbjct: 137 GQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWD 175 Score = 68.9 bits (167), Expect = 8e-12 Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 1/108 (0%) Frame = +1 Query: 535 HRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLA 711 H G ++ FS G +L +GS D ++ W+ + LL +L GH VK FSPDG A Sbjct: 20 HGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFA 79 Query: 712 SAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQ 855 SA TV++WD +C LKG + +F+PD + L SG D+ Sbjct: 80 SASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDK 127 Score = 35.8 bits (81), Expect(2) = e-120 Identities = 16/23 (69%), Positives = 18/23 (78%) Frame = +2 Query: 86 MNSGAPGTLAVGRVKFYCRHRGE 154 MNSG P TLAV RVKF+ +H GE Sbjct: 1 MNSGVPATLAVRRVKFFGQHGGE 23 >ref|XP_950627.1| PREDICTED: similar to WD repeat domain 51A isoform 2 [Homo sapiens] Length = 177 Score = 278 bits (711), Expect = 7e-75 Identities = 136/176 (77%), Positives = 151/176 (85%), Gaps = 3/176 (1%) Frame = +1 Query: 379 VLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCL 558 +LR LVGHRDSIQSSDF+P+ +CLATGSWDST+R+WDLR T A+ HQ LEGH GNISCL Sbjct: 1 MLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVRIWDLRMVTPAVSHQALEGHSGNISCL 60 Query: 559 CFSAFGLLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVK 738 C+SA GLLASGSWDKTIHIWKP+T SLL+QLKGHVTWVKSIAFSPD L LASAGYS VK Sbjct: 61 CYSASGLLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVK 120 Query: 739 VWDCNTGRCTDTLK-GVLDVAHSCAFTPDGKLLVSGTADQARCQVH--CKSPRAAQ 897 VWDCNTG+C +TLK GVLDVAH+CAFTPDGK+LVSG ADQ R Q+ KSPR Q Sbjct: 121 VWDCNTGKCLETLKQGVLDVAHTCAFTPDGKILVSGAADQTRRQISRTSKSPRDPQ 176 Score = 78.2 bits (191), Expect = 1e-14 Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 5/164 (3%) Frame = +1 Query: 256 LQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQS-GQVLRH--LVGHRDSIQSSD 426 L++L GH+ S+++ FSP LA+G WD V +W+++ + H L GH +I Sbjct: 2 LRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVRIWDLRMVTPAVSHQALEGHSGNISCLC 61 Query: 427 FAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFGL-LASGSWDK 603 ++ +S LA+GSWD TI +W + T ++ Q L+GH + + FS L LAS + + Sbjct: 62 YS-ASGLLASGSWDKTIHIW--KPTTSSLLIQ-LKGHVTWVKSIAFSPDELWLASAGYSR 117 Query: 604 TIHIWKPSTRSLLVQLK-GHVTWVKSIAFSPDGLQLASAGYSHT 732 + +W +T L LK G + + AF+PDG L S T Sbjct: 118 MVKVWDCNTGKCLETLKQGVLDVAHTCAFTPDGKILVSGAADQT 161 Score = 70.1 bits (170), Expect = 4e-12 Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 4/148 (2%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECL---QVLKGHQRSVETVSFSPDSKQLASGGWDK 345 FSP A+ S D T+R+WD+ V Q L+GH ++ + +S S LASG WDK Sbjct: 17 FSPTVNCLATGSWDSTVRIWDLRMVTPAVSHQALEGHSGNISCLCYSA-SGLLASGSWDK 75 Query: 346 RVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQE 525 + +W+ + +L L GH ++S F+P LA+ + +++WD TG Sbjct: 76 TIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWDC--NTGKCLETL 133 Query: 526 LEGHRGNISCLCFSAFG-LLASGSWDKT 606 +G F+ G +L SG+ D+T Sbjct: 134 KQGVLDVAHTCAFTPDGKILVSGAADQT 161 Score = 60.8 bits (146), Expect = 2e-09 Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 1/110 (0%) Frame = +1 Query: 154 GPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASG 333 G + +S G L AS S D TI +W L LKGH V++++FSPD LAS Sbjct: 55 GNISCLCYSASG-LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASA 113 Query: 334 GWDKRVMLWEVQSGQVLRHL-VGHRDSIQSSDFAPSSDCLATGSWDSTIR 480 G+ + V +W+ +G+ L L G D + F P L +G+ D T R Sbjct: 114 GYSRMVKVWDCNTGKCLETLKQGVLDVAHTCAFTPDGKILVSGAADQTRR 163 >ref|XP_939160.1| PREDICTED: similar to WD repeat domain 51A isoform 2 [Homo sapiens] Length = 177 Score = 274 bits (700), Expect = 1e-73 Identities = 134/176 (76%), Positives = 149/176 (84%), Gaps = 3/176 (1%) Frame = +1 Query: 379 VLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCL 558 +LR LVGHRDSIQSSDF+P+ +CLATGSWDST+ +WDLR T A+ HQ LEGH NISCL Sbjct: 1 MLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQALEGHSANISCL 60 Query: 559 CFSAFGLLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVK 738 C+SA GLLASGSWDKTIHIWKP+T SLL+QLKGHVTWVKSIAFSPD L LASAGYS VK Sbjct: 61 CYSASGLLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVK 120 Query: 739 VWDCNTGRCTDTLK-GVLDVAHSCAFTPDGKLLVSGTADQARCQVH--CKSPRAAQ 897 VWDCNTG+C +TLK GVLDVAH+CAFTPDGK+LVSG ADQ R Q+ KSPR Q Sbjct: 121 VWDCNTGKCLETLKQGVLDVAHTCAFTPDGKILVSGAADQTRRQISRTSKSPRDPQ 176 Score = 77.4 bits (189), Expect = 2e-14 Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 5/164 (3%) Frame = +1 Query: 256 LQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQS-GQVLRH--LVGHRDSIQSSD 426 L++L GH+ S+++ FSP LA+G WD V +W+++ + H L GH +I Sbjct: 2 LRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQALEGHSANISCLC 61 Query: 427 FAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFGL-LASGSWDK 603 ++ +S LA+GSWD TI +W + T ++ Q L+GH + + FS L LAS + + Sbjct: 62 YS-ASGLLASGSWDKTIHIW--KPTTSSLLIQ-LKGHVTWVKSIAFSPDELWLASAGYSR 117 Query: 604 TIHIWKPSTRSLLVQLK-GHVTWVKSIAFSPDGLQLASAGYSHT 732 + +W +T L LK G + + AF+PDG L S T Sbjct: 118 MVKVWDCNTGKCLETLKQGVLDVAHTCAFTPDGKILVSGAADQT 161 Score = 68.6 bits (166), Expect = 1e-11 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 4/148 (2%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECL---QVLKGHQRSVETVSFSPDSKQLASGGWDK 345 FSP A+ S D T+ +WD+ V Q L+GH ++ + +S S LASG WDK Sbjct: 17 FSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQALEGHSANISCLCYSA-SGLLASGSWDK 75 Query: 346 RVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQE 525 + +W+ + +L L GH ++S F+P LA+ + +++WD TG Sbjct: 76 TIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWDC--NTGKCLETL 133 Query: 526 LEGHRGNISCLCFSAFG-LLASGSWDKT 606 +G F+ G +L SG+ D+T Sbjct: 134 KQGVLDVAHTCAFTPDGKILVSGAADQT 161 Score = 60.5 bits (145), Expect = 3e-09 Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Frame = +1 Query: 193 LFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQS 372 L AS S D TI +W L LKGH V++++FSPD LAS G+ + V +W+ + Sbjct: 67 LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWDCNT 126 Query: 373 GQVLRHL-VGHRDSIQSSDFAPSSDCLATGSWDSTIR 480 G+ L L G D + F P L +G+ D T R Sbjct: 127 GKCLETLKQGVLDVAHTCAFTPDGKILVSGAADQTRR 163 >ref|NP_849143.1| hypothetical protein LOC164781 [Homo sapiens] Length = 415 Score = 145 bits (366), Expect = 7e-35 Identities = 75/233 (32%), Positives = 122/233 (52%), Gaps = 1/233 (0%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 F+P L A+ S D T +LWD+ E + L+GH + ++SF+ ++ +G +D V+ Sbjct: 185 FNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVV 244 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEG 534 +W+ +G+ + L+GH I S+ F + TGS D T ++WD G L G Sbjct: 245 VWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVA---TLTG 301 Query: 535 HRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLA 711 H I CF G L+A+ S D T I+ +TR + +L+GH + I+F+P G L Sbjct: 302 HDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLL 361 Query: 712 SAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQARCQV 870 + T ++WD TG+C L+G D SCAF G ++++G+ D C++ Sbjct: 362 TGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNT-CRI 413 Score = 129 bits (325), Expect = 4e-30 Identities = 76/234 (32%), Positives = 115/234 (49%), Gaps = 2/234 (0%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSF-SPDSKQLASG 333 P+ + G F + S D T +LWD A E L L+GH+ V ++F +P ++A+G Sbjct: 94 PLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATG 153 Query: 334 GWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAI 513 +DK LW V++G+ GH I F P S +ATGS D+T ++WD++ G Sbjct: 154 SFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEV- 212 Query: 514 FHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFS 690 L GH I L F+ G + +GS+D T+ +W T + L GH + S +F+ Sbjct: 213 --YTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFN 270 Query: 691 PDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTAD 852 D + + T K+WD G+C TL G D F GKL+ + +AD Sbjct: 271 WDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASAD 324 Score = 113 bits (282), Expect = 4e-25 Identities = 65/201 (32%), Positives = 105/201 (52%), Gaps = 2/201 (0%) Frame = +1 Query: 259 QVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDF-AP 435 +VLK H + V+ + +G +D+ LW+ SG+ L L GHR+ + + F P Sbjct: 86 KVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNP 145 Query: 436 SSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIH 612 D +ATGS+D T ++W + TG +H GH I CL F+ L+A+GS D T Sbjct: 146 YGDKIATGSFDKTCKLWSVE--TGKCYH-TFRGHTAEIVCLSFNPQSTLVATGSMDTTAK 202 Query: 613 IWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLD 792 +W + L+GH + S++F+ G ++ + + HTV VWD +TGR + L G Sbjct: 203 LWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCA 262 Query: 793 VAHSCAFTPDGKLLVSGTADQ 855 S +F D L+++G+ D+ Sbjct: 263 EISSASFNWDCSLILTGSMDK 283 Score = 82.8 bits (203), Expect = 5e-16 Identities = 39/104 (37%), Positives = 60/104 (57%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 F G+L A+ S+D T R++ A +C+ L+GH+ + +SF+P L +G DK Sbjct: 311 FDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTAR 370 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMW 486 +W+ Q+GQ L+ L GH D I S F + + TGS D+T R+W Sbjct: 371 IWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414 >ref|NP_005877.2| katanin p80 subunit B 1 [Homo sapiens] Length = 655 Score = 138 bits (347), Expect = 1e-32 Identities = 81/262 (30%), Positives = 129/262 (49%), Gaps = 2/262 (0%) Frame = +1 Query: 187 GRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEV 366 GRL A+ DC + LW + K C+ L GH VE+V + + + +G + +W++ Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92 Query: 367 QSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGN 546 ++ ++LR L+GH+ +I S DF P + +A+GS D+ I++WD+R G +F GH Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVF--RYRGHSQA 149 Query: 547 ISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGY 723 + CL FS G LAS + D T+ +W + ++ + GH V + F P+ LAS Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSS 209 Query: 724 SHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQARCQVHCKSPRAAQDN 903 T++ WD + ++G S F PDG L SG D R V+ P D Sbjct: 210 DRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLR--VYGWEPERCFDV 267 Query: 904 I-TRMGQIPVGRDCHSPLPGAA 966 + G++ C+ L G A Sbjct: 268 VLVNWGKVADLAICNDQLIGVA 289 Score = 105 bits (261), Expect = 1e-22 Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 1/208 (0%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGG 336 PV+ R + L + S +IR+WD+ + L+ L GH+ ++ ++ F P + +ASG Sbjct: 65 PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGS 124 Query: 337 WDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIF 516 D + LW+++ + GH +++ F+P LA+ + D T+++WDL G Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK---M 181 Query: 517 HQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSP 693 E GH G ++ + F LLASGS D+TI W ++ ++G V+S+ F+P Sbjct: 182 MSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241 Query: 694 DGLQLASAGYSHTVKVWDCNTGRCTDTL 777 DG L S G +++V+ RC D + Sbjct: 242 DGCCLYS-GCQDSLRVYGWEPERCFDVV 268 Score = 53.9 bits (128), Expect = 3e-07 Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Frame = +1 Query: 154 GPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASG 333 GPV F P+ L AS SSD TIR WD+ K + + ++G V +V F+PD L SG Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSG 249 Query: 334 GWDK-RVMLWE 363 D RV WE Sbjct: 250 CQDSLRVYGWE 260 >ref|NP_008882.2| TBP-associated factor 5 [Homo sapiens] Length = 800 Score = 134 bits (337), Expect = 2e-31 Identities = 82/210 (39%), Positives = 107/210 (50%), Gaps = 2/210 (0%) Frame = +1 Query: 124 SEILLPAPRGGPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSF 303 SE+ + GPV FSPD S+S D T+RLW + CL KGH V F Sbjct: 534 SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQF 593 Query: 304 SPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRM 483 SP SGG D+ LW Q LR GH + + F P+S+ +ATGS D T+R+ Sbjct: 594 SPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 653 Query: 484 WD-LRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKG 657 WD L G IF GH+G I L FS G LA+G+ D + +W ++ +LKG Sbjct: 654 WDVLNGNCVRIF----TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKG 709 Query: 658 HVTWVKSIAFSPDGLQLASAGYSHTVKVWD 747 H V S+ FS DG LAS +TV++WD Sbjct: 710 HTDTVCSLRFSRDGEILASGSMDNTVRLWD 739 Score = 101 bits (252), Expect = 1e-21 Identities = 69/228 (30%), Positives = 99/228 (43%), Gaps = 5/228 (2%) Frame = +1 Query: 184 DGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWE 363 D L S D R+ D L++L GH V SFSPD L S D V LW Sbjct: 512 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS 571 Query: 364 VQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQE----LE 531 +Q+ L GH + + F+P +G D R+W A H + Sbjct: 572 LQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW-------ATDHYQPLRIFA 624 Query: 532 GHRGNISCLCFSA-FGLLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQL 708 GH +++C F +A+GS D+T+ +W + + GH + S+ FSP+G L Sbjct: 625 GHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFL 684 Query: 709 ASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTAD 852 A+ V +WD G LKG D S F+ DG++L SG+ D Sbjct: 685 ATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMD 732 Score = 53.9 bits (128), Expect = 3e-07 Identities = 58/243 (23%), Positives = 83/243 (34%), Gaps = 43/243 (17%) Frame = +1 Query: 253 CLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFA 432 C + + V + DS +A G D V +W V ++ R Q+SD + Sbjct: 462 CFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKL-------RSVKQASDLS 514 Query: 433 PSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAF-GLLASGSWDKTI 609 + S D R+ D + + + L GH G + FS L S S D T+ Sbjct: 515 ----LIDKESDDVLERIMDEKTASEL---KILYGHSGPVYGASFSPDRNYLLSSSEDGTV 567 Query: 610 HIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGY---------------------- 723 +W T + LV KGH V FSP G S G+ Sbjct: 568 RLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHL 627 Query: 724 --------------------SHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSG 843 TV++WD G C G HS F+P+G+ L +G Sbjct: 628 ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATG 687 Query: 844 TAD 852 D Sbjct: 688 ATD 690 >ref|NP_055224.1| PCAF associated factor 65 beta isoform a [Homo sapiens] Length = 589 Score = 125 bits (315), Expect = 5e-29 Identities = 81/235 (34%), Positives = 112/235 (47%), Gaps = 3/235 (1%) Frame = +1 Query: 88 EQRGPRDAGGGESEILLPAPRG--GPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQ 261 E+ D G E +IL RG GPV RF D S S D +IR WD+ Sbjct: 323 EEDDEDDNAGTEMKIL----RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTV 378 Query: 262 VLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSS 441 + +GH V + SP S ASG D+ LW LR GH + F P+S Sbjct: 379 LYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNS 438 Query: 442 DCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIW 618 + LATGS D T+R+W + G + GHRG + L FS G LAS D+ + +W Sbjct: 439 NYLATGSTDKTVRLWSAQQGNSV---RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 495 Query: 619 KPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKG 783 ++ +L +L+GH + S+ FSPD +ASA ++V+VWD C+ G Sbjct: 496 DLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADG 550 Score = 100 bits (250), Expect = 2e-21 Identities = 74/260 (28%), Positives = 112/260 (43%), Gaps = 33/260 (12%) Frame = +1 Query: 178 SPDGRLFASTSSDCTIRLW--------------DVAKVEC------------------LQ 261 SPD +L A+ + I+LW DV+++ ++ Sbjct: 277 SPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDILEEEDDEDDNAGTEMK 336 Query: 262 VLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSS 441 +L+GH V + F DS L S D + W++ S GH + D +P S Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYS 396 Query: 442 DCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSA-FGLLASGSWDKTIHIW 618 A+GS D T R+W + GH ++ C+ F LA+GS DKT+ +W Sbjct: 397 LYFASGSHDRTARLWSFDRTYPLRIYA---GHLADVDCVKFHPNSNYLATGSTDKTVRLW 453 Query: 619 KPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVA 798 + + GH V S+AFSP+G LASAG +K+WD +G L+G D Sbjct: 454 SAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNI 513 Query: 799 HSCAFTPDGKLLVSGTADQA 858 S F+PD L+ S + D + Sbjct: 514 TSLTFSPDSGLIASASMDNS 533 Score = 95.9 bits (237), Expect = 6e-20 Identities = 49/145 (33%), Positives = 82/145 (56%), Gaps = 8/145 (5%) Frame = +1 Query: 172 RFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRV 351 +F P+ A+ S+D T+RLW + +++ GH+ V +++FSP+ K LAS G D+R+ Sbjct: 433 KFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRL 492 Query: 352 MLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRG--------GTG 507 LW++ SG + + L GH D+I S F+P S +A+ S D+++R+WD+R G+ Sbjct: 493 KLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSS 552 Query: 508 AIFHQELEGHRGNISCLCFSAFGLL 582 + G N+ + F A LL Sbjct: 553 SELVGVYTGQMSNVLSVQFMACNLL 577 >ref|NP_061942.2| WD repeat domain 5B [Homo sapiens] Length = 330 Score = 125 bits (314), Expect = 7e-29 Identities = 79/240 (32%), Positives = 129/240 (53%), Gaps = 9/240 (3%) Frame = +1 Query: 160 VKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGW 339 V +FSP+G AS+S+D I +W + + L GH + V++S DS +L S Sbjct: 44 VSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRLVSASD 103 Query: 340 DKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFH 519 DK + LW+V+SG+ L+ L GH + + +F P S+ + +GS+D T+++W+++ G Sbjct: 104 DKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCL--- 160 Query: 520 QELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQL----KGHVTWVKSIA 684 + L H +S + F+ G L+ SGS+D IW ++ L L V++VK Sbjct: 161 KTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVK--- 217 Query: 685 FSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAF----TPDGKLLVSGTAD 852 FSP+G + +A +T+K+WD + GRC T G + + C F GK +VSG+ D Sbjct: 218 FSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKY-CIFANFSVTGGKWIVSGSED 276 Score = 108 bits (271), Expect = 7e-24 Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 4/200 (2%) Frame = +1 Query: 265 LKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSD 444 L GH +V +V FSP+ + LAS D+ +++W G+ + L GH +++ SD A SSD Sbjct: 37 LVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGH--NLEISDVAWSSD 94 Query: 445 C--LATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFS-AFGLLASGSWDKTIHI 615 L + S D T+++WD+R G + L+GH + C F+ L+ SGS+D+T+ I Sbjct: 95 SSRLVSASDDKTLKLWDVRSGKCL---KTLKGHSNYVFCCNFNPPSNLIISGSFDETVKI 151 Query: 616 WKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDV 795 W+ T L L H V ++ F+ G + S Y ++WD +G+C TL + Sbjct: 152 WEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNP 211 Query: 796 AHS-CAFTPDGKLLVSGTAD 852 S F+P+GK +++ T D Sbjct: 212 PVSFVKFSPNGKYILTATLD 231 Score = 107 bits (266), Expect = 3e-23 Identities = 68/231 (29%), Positives = 107/231 (46%), Gaps = 5/231 (2%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 +S D S S D T++LWDV +CL+ LKGH V +F+P S + SG +D+ V Sbjct: 91 WSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVK 150 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEG 534 +WEV++G+ L+ L H D + + F S + +GS+D R+WD +G ++ Sbjct: 151 IWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWD--AASGQCLKTLVDD 208 Query: 535 HRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFS----PDG 699 +S + FS G + + + D T+ +W S L GH K F+ G Sbjct: 209 DNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKN-EKYCIFANFSVTGG 267 Query: 700 LQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTAD 852 + S + V +W+ T L+G DV S A P L+ S + Sbjct: 268 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHPTENLIASAALE 318 Score = 73.9 bits (180), Expect = 2e-13 Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 5/132 (3%) Frame = +1 Query: 106 DAGGGESEILLPAPRGGPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRS 285 DA G+ L PV F +FSP+G+ + + D T++LWD ++ CL+ GH+ Sbjct: 195 DAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNE 254 Query: 286 VETV--SFS-PDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLAT 456 + +FS K + SG D V +W +Q+ ++++ L GH D + S+ P+ + +A+ Sbjct: 255 KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISAACHPTENLIAS 314 Query: 457 GSW--DSTIRMW 486 + D TI++W Sbjct: 315 AALENDKTIKLW 326 Score = 71.2 bits (173), Expect = 2e-12 Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 7/161 (4%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQR-SVETVSFSPDSKQLASG 333 PV F+ G L S S D R+WD A +CL+ L V V FSP+ K + + Sbjct: 169 PVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYILTA 228 Query: 334 GWDKRVMLWEVQSGQVLRHLVGHRDS---IQSSDFAPSSDCLATGSWDSTIRMWDLRGGT 504 D + LW+ G+ L+ GH++ I ++ + +GS D+ + +W+L+ T Sbjct: 229 TLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ--T 286 Query: 505 GAIFHQELEGHRG-NISCLCFSAFGLLASGSW--DKTIHIW 618 I Q+L+GH IS C L+AS + DKTI +W Sbjct: 287 KEIV-QKLQGHTDVVISAACHPTENLIASAALENDKTIKLW 326 Score = 70.9 bits (172), Expect = 2e-12 Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 1/111 (0%) Frame = +1 Query: 526 LEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGL 702 L GH +S + FS G LAS S D+ I IW L GH + +A+S D Sbjct: 37 LVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSS 96 Query: 703 QLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQ 855 +L SA T+K+WD +G+C TLKG + C F P L++SG+ D+ Sbjct: 97 RLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDE 147 >ref|NP_000421.1| platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit (45kD) [Homo sapiens] Length = 410 Score = 125 bits (313), Expect = 9e-29 Identities = 76/248 (30%), Positives = 114/248 (45%), Gaps = 21/248 (8%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 F G+L AS S+D TI+LWD EC++ + GH +V +V+ P+ + S DK + Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEG 534 +WEVQ+G ++ GHR+ ++ +A+ S D T+R+W + EL Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV---ATKECKAELRE 274 Query: 535 HRGNISCLCFS----------AFG-----------LLASGSWDKTIHIWKPSTRSLLVQL 651 H + C+ ++ A G L SGS DKTI +W ST L+ L Sbjct: 275 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334 Query: 652 KGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKL 831 GH WV+ + F G + S T++VWD RC TL S F Sbjct: 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 394 Query: 832 LVSGTADQ 855 +V+G+ DQ Sbjct: 395 VVTGSVDQ 402 Score = 113 bits (282), Expect = 4e-25 Identities = 75/254 (29%), Positives = 120/254 (47%), Gaps = 21/254 (8%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGG 336 PV F P + S S D TI++WD + + LKGH SV+ +SF K LAS Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS 169 Query: 337 WDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIF 516 D + LW+ Q + +R + GH ++ S P+ D + + S D TI+MW+++ G Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV-- 227 Query: 517 HQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSP 693 + GHR + + + G L+AS S D+T+ +W +T+ +L+ H V+ I+++P Sbjct: 228 -KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286 Query: 694 D--------------------GLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAF 813 + G L S T+K+WD +TG C TL G + F Sbjct: 287 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF 346 Query: 814 TPDGKLLVSGTADQ 855 GK ++S D+ Sbjct: 347 HSGGKFILSCADDK 360 Score = 97.8 bits (242), Expect = 2e-20 Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 1/187 (0%) Frame = +1 Query: 265 LKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSD 444 L GH+ V V F P + S D + +W+ ++G R L GH DS+Q F S Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163 Query: 445 CLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWK 621 LA+ S D TI++WD +G + + GH N+S + G + S S DKTI +W+ Sbjct: 164 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220 Query: 622 PSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAH 801 T + GH WV+ + + DG +AS TV+VW T C L+ V Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280 Query: 802 SCAFTPD 822 ++ P+ Sbjct: 281 CISWAPE 287 Score = 67.4 bits (163), Expect = 2e-11 Identities = 34/103 (33%), Positives = 54/103 (52%) Frame = +1 Query: 187 GRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEV 366 G S S D TI++WDV+ CL L GH V V F K + S DK + +W+ Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 Query: 367 QSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLR 495 ++ + ++ L H + S DF ++ + TGS D T+++W+ R Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 Database: RefSeqHP Posted date: Aug 2, 2006 12:57 AM Number of letters in database: 17,774,539 Number of sequences in database: 39,411 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,743,995 Number of Sequences: 39411 Number of extensions: 1786868 Number of successful extensions: 9615 Number of sequences better than 1.0e-05: 10 Number of HSP's better than 0.0 without gapping: 5390 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8140 length of database: 17,774,539 effective HSP length: 104 effective length of database: 13,675,795 effective search space used: 4007007935 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
Search to RefSeqCP
BLASTX 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 20060611S-030165 (1194 letters) Database: RefSeqCP 33,732 sequences; 19,266,565 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Alignment gi|XP_534593.2| PREDICTED: similar to CG7568-PA [Canis familiaris] 143 3e-34 Alignment gi|XP_862542.1| PREDICTED: similar to Katanin p80 WD40-containi... 137 2e-32 Alignment gi|XP_850865.1| PREDICTED: similar to Katanin p80 WD40-containi... 137 2e-32 Alignment gi|XP_546100.2| PREDICTED: similar to TAF5-like RNA polymerase ... 127 3e-29 Alignment gi|XP_532646.2| PREDICTED: similar to WD repeat domain 51B [Can... 126 4e-29 Alignment gi|XP_537775.2| PREDICTED: similar to platelet-activating facto... 125 1e-28 Alignment gi|XP_854482.1| PREDICTED: similar to platelet-activating facto... 125 1e-28 Alignment gi|XP_868508.1| PREDICTED: similar to platelet-activating facto... 125 1e-28 Alignment gi|XP_868519.1| PREDICTED: similar to platelet-activating facto... 123 4e-28 Alignment gi|XP_850117.1| PREDICTED: similar to WD repeat domain 5 [Canis... 117 3e-26 >ref|XP_534593.2| PREDICTED: similar to CG7568-PA [Canis familiaris] Length = 415 Score = 143 bits (361), Expect = 3e-34 Identities = 76/233 (32%), Positives = 121/233 (51%), Gaps = 1/233 (0%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 F+P L A+ S D T +LWD+ E + L+GH + ++SF+ ++ +G +D V Sbjct: 185 FNPQSTLVATGSMDTTAKLWDIQSGEEVFTLRGHSAEIISLSFNTSGDRIVTGSFDHTVA 244 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEG 534 +WE +G+ + L+GH I S+ F + TGS D T +WD G L G Sbjct: 245 VWEADTGRKVYTLIGHCAEISSALFNWDCSLILTGSMDKTCMLWDASNGKCVA---TLTG 301 Query: 535 HRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLA 711 H I CF G L+A+ S D T ++ +TR L +L+GH + I+F+P G +L Sbjct: 302 HDDEILDSCFDYTGKLIATASADGTARVFSAATRKCLTKLEGHEGEISKISFNPQGNRLL 361 Query: 712 SAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQARCQV 870 + T ++WD TG+C L+G D SCAF G ++++G+ D C++ Sbjct: 362 TGSADETARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNT-CRI 413 Score = 130 bits (327), Expect = 3e-30 Identities = 75/234 (32%), Positives = 115/234 (49%), Gaps = 2/234 (0%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSF-SPDSKQLASG 333 P+ + G F + S D T +LWD A E L L+GH+ V ++F +P ++A+G Sbjct: 94 PLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATG 153 Query: 334 GWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAI 513 +DK LW V++G+ GH I F P S +ATGS D+T ++WD++ G Sbjct: 154 SFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVF 213 Query: 514 FHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFS 690 L GH I L F+ G + +GS+D T+ +W+ T + L GH + S F+ Sbjct: 214 ---TLRGHSAEIISLSFNTSGDRIVTGSFDHTVAVWEADTGRKVYTLIGHCAEISSALFN 270 Query: 691 PDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTAD 852 D + + T +WD + G+C TL G D F GKL+ + +AD Sbjct: 271 WDCSLILTGSMDKTCMLWDASNGKCVATLTGHDDEILDSCFDYTGKLIATASAD 324 Score = 111 bits (278), Expect = 1e-24 Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 2/201 (0%) Frame = +1 Query: 259 QVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDF-AP 435 +VL+ H + V+ + +G +D+ LW+ SG+ L L GHR+ + + F P Sbjct: 86 KVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNP 145 Query: 436 SSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIH 612 D +ATGS+D T ++W + TG +H GH I CL F+ L+A+GS D T Sbjct: 146 YGDKIATGSFDKTCKLWSVE--TGKCYH-TFRGHTAEIVCLSFNPQSTLVATGSMDTTAK 202 Query: 613 IWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLD 792 +W + + L+GH + S++F+ G ++ + + HTV VW+ +TGR TL G Sbjct: 203 LWDIQSGEEVFTLRGHSAEIISLSFNTSGDRIVTGSFDHTVAVWEADTGRKVYTLIGHCA 262 Query: 793 VAHSCAFTPDGKLLVSGTADQ 855 S F D L+++G+ D+ Sbjct: 263 EISSALFNWDCSLILTGSMDK 283 Score = 84.3 bits (207), Expect = 2e-16 Identities = 40/104 (38%), Positives = 61/104 (58%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 F G+L A+ S+D T R++ A +CL L+GH+ + +SF+P +L +G D+ Sbjct: 311 FDYTGKLIATASADGTARVFSAATRKCLTKLEGHEGEISKISFNPQGNRLLTGSADETAR 370 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMW 486 +W+ Q+GQ L+ L GH D I S F D + TGS D+T R+W Sbjct: 371 IWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414 >ref|XP_862542.1| PREDICTED: similar to Katanin p80 WD40-containing subunit B1 (Katanin p80 subunit B1) (p80 katanin) isoform 2 [Canis familiaris] Length = 655 Score = 137 bits (346), Expect = 2e-32 Identities = 73/226 (32%), Positives = 116/226 (51%), Gaps = 1/226 (0%) Frame = +1 Query: 187 GRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEV 366 GRL A+ DC + LW + K C+ L GH VE+V + + + +G + +W++ Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92 Query: 367 QSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGN 546 ++ ++LR L+GH+ +I S DF P + +A+GS D+ I++WD+R G +F GH Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVF--RYRGHSQA 149 Query: 547 ISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGY 723 + CL FS G LAS + D T+ +W + ++ + GH V + F P+ LAS Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSS 209 Query: 724 SHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQAR 861 T++ WD + ++G S F PDG L SG D R Sbjct: 210 DRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLR 255 Score = 105 bits (261), Expect = 1e-22 Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 1/208 (0%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGG 336 PV+ R + L + S +IR+WD+ + L+ L GH+ ++ ++ F P + +ASG Sbjct: 65 PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGS 124 Query: 337 WDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIF 516 D + LW+++ + GH +++ F+P LA+ + D T+++WDL G Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK---M 181 Query: 517 HQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSP 693 E GH G ++ + F LLASGS D+TI W ++ ++G V+S+ F+P Sbjct: 182 MSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241 Query: 694 DGLQLASAGYSHTVKVWDCNTGRCTDTL 777 DG L S G +++V+ RC D + Sbjct: 242 DGCCLYS-GCQDSLRVYGWEPERCFDVV 268 Score = 93.2 bits (230), Expect = 4e-19 Identities = 63/188 (33%), Positives = 92/188 (48%), Gaps = 2/188 (1%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 F P G AS S D I+LWD+ + C+ +GH ++V + FSPD K LAS D V Sbjct: 113 FHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVK 172 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEG 534 LW++ +G+++ GH + +F P+ LA+GS D TIR WDL +EG Sbjct: 173 LWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV---SCIEG 229 Query: 535 HRGNISCLCFSAFG-LLASGSWDK-TIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQL 708 G + + F+ G L SG D ++ W+P R V L V+W K + QL Sbjct: 230 EPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPE-RCFDVVL---VSWGKVADLAVCNDQL 285 Query: 709 ASAGYSHT 732 +S + Sbjct: 286 IGVAFSQS 293 Score = 53.9 bits (128), Expect = 3e-07 Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Frame = +1 Query: 154 GPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASG 333 GPV F P+ L AS SSD TIR WD+ K + + ++G V +V F+PD L SG Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSG 249 Query: 334 GWDK-RVMLWE 363 D RV WE Sbjct: 250 CQDSLRVYGWE 260 >ref|XP_850865.1| PREDICTED: similar to Katanin p80 WD40-containing subunit B1 (Katanin p80 subunit B1) (p80 katanin) isoform 1 [Canis familiaris] Length = 655 Score = 137 bits (346), Expect = 2e-32 Identities = 73/226 (32%), Positives = 116/226 (51%), Gaps = 1/226 (0%) Frame = +1 Query: 187 GRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEV 366 GRL A+ DC + LW + K C+ L GH VE+V + + + +G + +W++ Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92 Query: 367 QSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGN 546 ++ ++LR L+GH+ +I S DF P + +A+GS D+ I++WD+R G +F GH Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVF--RYRGHSQA 149 Query: 547 ISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGY 723 + CL FS G LAS + D T+ +W + ++ + GH V + F P+ LAS Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSS 209 Query: 724 SHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQAR 861 T++ WD + ++G S F PDG L SG D R Sbjct: 210 DRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLR 255 Score = 105 bits (261), Expect = 1e-22 Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 1/208 (0%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGG 336 PV+ R + L + S +IR+WD+ + L+ L GH+ ++ ++ F P + +ASG Sbjct: 65 PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGS 124 Query: 337 WDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIF 516 D + LW+++ + GH +++ F+P LA+ + D T+++WDL G Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK---M 181 Query: 517 HQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSP 693 E GH G ++ + F LLASGS D+TI W ++ ++G V+S+ F+P Sbjct: 182 MSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241 Query: 694 DGLQLASAGYSHTVKVWDCNTGRCTDTL 777 DG L S G +++V+ RC D + Sbjct: 242 DGCCLYS-GCQDSLRVYGWEPERCFDVV 268 Score = 93.2 bits (230), Expect = 4e-19 Identities = 63/188 (33%), Positives = 92/188 (48%), Gaps = 2/188 (1%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 F P G AS S D I+LWD+ + C+ +GH ++V + FSPD K LAS D V Sbjct: 113 FHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVK 172 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEG 534 LW++ +G+++ GH + +F P+ LA+GS D TIR WDL +EG Sbjct: 173 LWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVV---SCIEG 229 Query: 535 HRGNISCLCFSAFG-LLASGSWDK-TIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQL 708 G + + F+ G L SG D ++ W+P R V L V+W K + QL Sbjct: 230 EPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPE-RCFDVVL---VSWGKVADLAVCNDQL 285 Query: 709 ASAGYSHT 732 +S + Sbjct: 286 IGVAFSQS 293 Score = 53.9 bits (128), Expect = 3e-07 Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Frame = +1 Query: 154 GPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASG 333 GPV F P+ L AS SSD TIR WD+ K + + ++G V +V F+PD L SG Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSG 249 Query: 334 GWDK-RVMLWE 363 D RV WE Sbjct: 250 CQDSLRVYGWE 260 >ref|XP_546100.2| PREDICTED: similar to TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L (PCAF associated factor 65 beta) (PAF65-beta) [Canis familiaris] Length = 589 Score = 127 bits (318), Expect = 3e-29 Identities = 81/235 (34%), Positives = 112/235 (47%), Gaps = 3/235 (1%) Frame = +1 Query: 88 EQRGPRDAGGGESEILLPAPRG--GPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQ 261 E+ D G E +IL RG GPV RF D S S D +IR WD+ Sbjct: 323 EEDDEDDNAGTEMKIL----RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTV 378 Query: 262 VLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSS 441 + +GH V + SP S ASG D+ LW LR GH + F P+S Sbjct: 379 LYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNS 438 Query: 442 DCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIW 618 + LATGS D T+R+W + G + GHRG + L FS G LAS D+ + +W Sbjct: 439 NYLATGSTDKTVRLWSAQQGNSV---RLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLW 495 Query: 619 KPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKG 783 ++ +L +L+GH + S+ FSPD +ASA ++V+VWD C+ G Sbjct: 496 DLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADG 550 Score = 101 bits (252), Expect = 1e-21 Identities = 74/260 (28%), Positives = 112/260 (43%), Gaps = 33/260 (12%) Frame = +1 Query: 178 SPDGRLFASTSSDCTIRLW--------------DVAKVEC------------------LQ 261 SPD +L A+ + I+LW DV+++ ++ Sbjct: 277 SPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDILEEEDDEDDNAGTEMK 336 Query: 262 VLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSS 441 +L+GH V + F DS L S D + W++ S GH + D +P S Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYS 396 Query: 442 DCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSA-FGLLASGSWDKTIHIW 618 A+GS D T R+W + GH ++ C+ F LA+GS DKT+ +W Sbjct: 397 LYFASGSHDRTARLWSFDRTYPLRIYA---GHLADVDCVKFHPNSNYLATGSTDKTVRLW 453 Query: 619 KPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVA 798 + + GH V S+AFSP+G LASAG +K+WD +G L+G D Sbjct: 454 SAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNI 513 Query: 799 HSCAFTPDGKLLVSGTADQA 858 S F+PD L+ S + D + Sbjct: 514 TSLTFSPDSSLIASASMDNS 533 >ref|XP_532646.2| PREDICTED: similar to WD repeat domain 51B [Canis familiaris] Length = 833 Score = 126 bits (317), Expect = 4e-29 Identities = 68/198 (34%), Positives = 101/198 (51%), Gaps = 3/198 (1%) Frame = +1 Query: 268 KGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDC 447 KGH+ ++ +V FSP KQLA+ WD +MLW + VGH+D + S F+P + Sbjct: 370 KGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNL 429 Query: 448 LATGSWDSTIRMW--DLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIW 618 LA+ S D T+R+W D RG + E + H + + FSA G LA+ S DK+I +W Sbjct: 430 LASASRDRTVRLWIPDKRGKS-----SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 484 Query: 619 KPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVA 798 + L L H WV+ FSPDG + S T+K+WD +C + + A Sbjct: 485 NMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFA 544 Query: 799 HSCAFTPDGKLLVSGTAD 852 + F P+G + S +D Sbjct: 545 NFVDFNPNGTCIASAGSD 562 Score = 105 bits (261), Expect = 1e-22 Identities = 68/227 (29%), Positives = 103/227 (45%), Gaps = 1/227 (0%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 FSP G+ A+ S D + LW+ GH+ V +V FSP LAS D+ V Sbjct: 381 FSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVR 440 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEG 534 LW H ++S DF+ LAT S D +I++W++ F L Sbjct: 441 LWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQR---FLYSLYR 497 Query: 535 HRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLA 711 H + C FS G L+ S S DKTI IW + + + V + + F+P+G +A Sbjct: 498 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIA 557 Query: 712 SAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTAD 852 SAG HTVK+WD + + + +F P G +++ ++D Sbjct: 558 SAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSD 604 Score = 102 bits (254), Expect = 7e-22 Identities = 70/228 (30%), Positives = 104/228 (45%), Gaps = 1/228 (0%) Frame = +1 Query: 172 RFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRV 351 +FSP G L AS S D T+RLW K K H V +V FS D + LA+ DK + Sbjct: 422 QFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSI 481 Query: 352 MLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELE 531 +W + + L L H ++ + F+P + + S D TI++WD T Sbjct: 482 KVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT---TNKQCVNNFS 538 Query: 532 GHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQL 708 G + + F+ G +AS D T+ IW LL + H V ++F P G + Sbjct: 539 DSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYI 598 Query: 709 ASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTAD 852 +A T+K+ D GR TL+G + +F+ G+L SG AD Sbjct: 599 ITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGAD 646 Score = 99.0 bits (245), Expect = 8e-21 Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 3/218 (1%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGG 336 PV+ FS DG+ A+ S D +I++W++ + L L H V FSPD + + S Sbjct: 459 PVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 518 Query: 337 WDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIF 516 DK + +W+ + Q + + DF P+ C+A+ D T+++WD+R Sbjct: 519 EDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNK---L 575 Query: 517 HQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSP 693 Q + H G ++C+ F G + + S D T+ I L+ L+GH V +++FS Sbjct: 576 LQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSK 635 Query: 694 DGLQLASAGYSHTVKVWDCNTG--RCTDTLKGVLDVAH 801 G +S G V +W N C D +K L H Sbjct: 636 GGELFSSGGADTQVLLWRTNFDYLNCKDMIKRNLKRLH 673 Score = 97.8 bits (242), Expect = 2e-20 Identities = 56/158 (35%), Positives = 85/158 (53%), Gaps = 1/158 (0%) Frame = +1 Query: 385 RHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCF 564 R+ GH+ +I S DF+PS LAT SWD+ + +W+ + A GH+ ++ + F Sbjct: 367 RYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAF---RYVGHKDVVTSVQF 423 Query: 565 SAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKV 741 S G LLAS S D+T+ +W P R + K H V+S+ FS DG LA+A ++KV Sbjct: 424 SPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV 483 Query: 742 WDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQ 855 W+ R +L F+PDG+L+VS + D+ Sbjct: 484 WNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 521 Score = 62.0 bits (149), Expect = 1e-09 Identities = 29/111 (26%), Positives = 55/111 (49%) Frame = +1 Query: 154 GPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASG 333 G F F+P+G AS SD T+++WD+ + LQ + H V VSF P + + Sbjct: 542 GFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITA 601 Query: 334 GWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMW 486 D + + ++ G+++ L GH + + F+ + ++G D+ + +W Sbjct: 602 SSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLW 652 >ref|XP_537775.2| PREDICTED: similar to platelet-activating factor acetylhydrolase beta subunit isoform 1 [Canis familiaris] Length = 372 Score = 125 bits (313), Expect = 1e-28 Identities = 76/248 (30%), Positives = 114/248 (45%), Gaps = 21/248 (8%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 F G+L AS S+D TI+LWD EC++ + GH +V +V+ P+ + S DK + Sbjct: 120 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 179 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEG 534 +WEVQ+G ++ GHR+ ++ +A+ S D T+R+W + EL Sbjct: 180 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV---ATKECKAELRE 236 Query: 535 HRGNISCLCFS----------AFG-----------LLASGSWDKTIHIWKPSTRSLLVQL 651 H + C+ ++ A G L SGS DKTI +W ST L+ L Sbjct: 237 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 296 Query: 652 KGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKL 831 GH WV+ + F G + S T++VWD RC TL S F Sbjct: 297 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 356 Query: 832 LVSGTADQ 855 +V+G+ DQ Sbjct: 357 VVTGSVDQ 364 Score = 113 bits (282), Expect = 4e-25 Identities = 75/254 (29%), Positives = 120/254 (47%), Gaps = 21/254 (8%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGG 336 PV F P + S S D TI++WD + + LKGH SV+ +SF K LAS Sbjct: 72 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS 131 Query: 337 WDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIF 516 D + LW+ Q + +R + GH ++ S P+ D + + S D TI+MW+++ G Sbjct: 132 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV-- 189 Query: 517 HQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSP 693 + GHR + + + G L+AS S D+T+ +W +T+ +L+ H V+ I+++P Sbjct: 190 -KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 248 Query: 694 D--------------------GLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAF 813 + G L S T+K+WD +TG C TL G + F Sbjct: 249 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF 308 Query: 814 TPDGKLLVSGTADQ 855 GK ++S D+ Sbjct: 309 HSGGKFILSCADDK 322 Score = 97.8 bits (242), Expect = 2e-20 Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 1/187 (0%) Frame = +1 Query: 265 LKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSD 444 L GH+ V V F P + S D + +W+ ++G R L GH DS+Q F S Sbjct: 66 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 125 Query: 445 CLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWK 621 LA+ S D TI++WD +G + + GH N+S + G + S S DKTI +W+ Sbjct: 126 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 182 Query: 622 PSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAH 801 T + GH WV+ + + DG +AS TV+VW T C L+ V Sbjct: 183 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 242 Query: 802 SCAFTPD 822 ++ P+ Sbjct: 243 CISWAPE 249 Score = 67.4 bits (163), Expect = 3e-11 Identities = 34/103 (33%), Positives = 54/103 (52%) Frame = +1 Query: 187 GRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEV 366 G S S D TI++WDV+ CL L GH V V F K + S DK + +W+ Sbjct: 270 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 329 Query: 367 QSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLR 495 ++ + ++ L H + S DF ++ + TGS D T+++W+ R Sbjct: 330 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 372 >ref|XP_854482.1| PREDICTED: similar to platelet-activating factor acetylhydrolase beta subunit isoform 2 [Canis familiaris] Length = 410 Score = 125 bits (313), Expect = 1e-28 Identities = 76/248 (30%), Positives = 114/248 (45%), Gaps = 21/248 (8%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 F G+L AS S+D TI+LWD EC++ + GH +V +V+ P+ + S DK + Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEG 534 +WEVQ+G ++ GHR+ ++ +A+ S D T+R+W + EL Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV---ATKECKAELRE 274 Query: 535 HRGNISCLCFS----------AFG-----------LLASGSWDKTIHIWKPSTRSLLVQL 651 H + C+ ++ A G L SGS DKTI +W ST L+ L Sbjct: 275 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334 Query: 652 KGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKL 831 GH WV+ + F G + S T++VWD RC TL S F Sbjct: 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 394 Query: 832 LVSGTADQ 855 +V+G+ DQ Sbjct: 395 VVTGSVDQ 402 Score = 113 bits (282), Expect = 4e-25 Identities = 75/254 (29%), Positives = 120/254 (47%), Gaps = 21/254 (8%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGG 336 PV F P + S S D TI++WD + + LKGH SV+ +SF K LAS Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS 169 Query: 337 WDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIF 516 D + LW+ Q + +R + GH ++ S P+ D + + S D TI+MW+++ G Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV-- 227 Query: 517 HQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSP 693 + GHR + + + G L+AS S D+T+ +W +T+ +L+ H V+ I+++P Sbjct: 228 -KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286 Query: 694 D--------------------GLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAF 813 + G L S T+K+WD +TG C TL G + F Sbjct: 287 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF 346 Query: 814 TPDGKLLVSGTADQ 855 GK ++S D+ Sbjct: 347 HSGGKFILSCADDK 360 Score = 97.8 bits (242), Expect = 2e-20 Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 1/187 (0%) Frame = +1 Query: 265 LKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSD 444 L GH+ V V F P + S D + +W+ ++G R L GH DS+Q F S Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163 Query: 445 CLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWK 621 LA+ S D TI++WD +G + + GH N+S + G + S S DKTI +W+ Sbjct: 164 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220 Query: 622 PSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAH 801 T + GH WV+ + + DG +AS TV+VW T C L+ V Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280 Query: 802 SCAFTPD 822 ++ P+ Sbjct: 281 CISWAPE 287 Score = 67.4 bits (163), Expect = 3e-11 Identities = 34/103 (33%), Positives = 54/103 (52%) Frame = +1 Query: 187 GRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEV 366 G S S D TI++WDV+ CL L GH V V F K + S DK + +W+ Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 Query: 367 QSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLR 495 ++ + ++ L H + S DF ++ + TGS D T+++W+ R Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 >ref|XP_868508.1| PREDICTED: similar to platelet-activating factor acetylhydrolase beta subunit isoform 3 [Canis familiaris] Length = 345 Score = 125 bits (313), Expect = 1e-28 Identities = 76/248 (30%), Positives = 114/248 (45%), Gaps = 21/248 (8%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 F G+L AS S+D TI+LWD EC++ + GH +V +V+ P+ + S DK + Sbjct: 93 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 152 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEG 534 +WEVQ+G ++ GHR+ ++ +A+ S D T+R+W + EL Sbjct: 153 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV---ATKECKAELRE 209 Query: 535 HRGNISCLCFS----------AFG-----------LLASGSWDKTIHIWKPSTRSLLVQL 651 H + C+ ++ A G L SGS DKTI +W ST L+ L Sbjct: 210 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 269 Query: 652 KGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKL 831 GH WV+ + F G + S T++VWD RC TL S F Sbjct: 270 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 329 Query: 832 LVSGTADQ 855 +V+G+ DQ Sbjct: 330 VVTGSVDQ 337 Score = 113 bits (282), Expect = 4e-25 Identities = 75/254 (29%), Positives = 120/254 (47%), Gaps = 21/254 (8%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGG 336 PV F P + S S D TI++WD + + LKGH SV+ +SF K LAS Sbjct: 45 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS 104 Query: 337 WDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIF 516 D + LW+ Q + +R + GH ++ S P+ D + + S D TI+MW+++ G Sbjct: 105 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV-- 162 Query: 517 HQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSP 693 + GHR + + + G L+AS S D+T+ +W +T+ +L+ H V+ I+++P Sbjct: 163 -KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 221 Query: 694 D--------------------GLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAF 813 + G L S T+K+WD +TG C TL G + F Sbjct: 222 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF 281 Query: 814 TPDGKLLVSGTADQ 855 GK ++S D+ Sbjct: 282 HSGGKFILSCADDK 295 Score = 97.8 bits (242), Expect = 2e-20 Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 1/187 (0%) Frame = +1 Query: 265 LKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSD 444 L GH+ V V F P + S D + +W+ ++G R L GH DS+Q F S Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98 Query: 445 CLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWK 621 LA+ S D TI++WD +G + + GH N+S + G + S S DKTI +W+ Sbjct: 99 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 155 Query: 622 PSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAH 801 T + GH WV+ + + DG +AS TV+VW T C L+ V Sbjct: 156 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 215 Query: 802 SCAFTPD 822 ++ P+ Sbjct: 216 CISWAPE 222 Score = 67.4 bits (163), Expect = 3e-11 Identities = 34/103 (33%), Positives = 54/103 (52%) Frame = +1 Query: 187 GRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEV 366 G S S D TI++WDV+ CL L GH V V F K + S DK + +W+ Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302 Query: 367 QSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLR 495 ++ + ++ L H + S DF ++ + TGS D T+++W+ R Sbjct: 303 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345 >ref|XP_868519.1| PREDICTED: similar to platelet-activating factor acetylhydrolase beta subunit isoform 5 [Canis familiaris] Length = 415 Score = 123 bits (308), Expect = 4e-28 Identities = 76/253 (30%), Positives = 114/253 (45%), Gaps = 26/253 (10%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 F G+L AS S+D TI+LWD EC++ + GH +V +V+ P+ + S DK + Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEG 534 +WEVQ+G ++ GHR+ ++ +A+ S D T+R+W + EL Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV---ATKECKAELRE 274 Query: 535 HRGNISCLCFS----------AFG----------------LLASGSWDKTIHIWKPSTRS 636 H + C+ ++ A G L SGS DKTI +W ST Sbjct: 275 HEHVVECISWAPESSYSSISEATGSEEENPRTKKSGKPGPFLLSGSRDKTIKMWDVSTGM 334 Query: 637 LLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFT 816 L+ L GH WV+ + F G + S T++VWD RC TL S F Sbjct: 335 CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH 394 Query: 817 PDGKLLVSGTADQ 855 +V+G+ DQ Sbjct: 395 KTAPYVVTGSVDQ 407 Score = 111 bits (277), Expect = 2e-24 Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 26/259 (10%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGG 336 PV F P + S S D TI++WD + + LKGH SV+ +SF K LAS Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS 169 Query: 337 WDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIF 516 D + LW+ Q + +R + GH ++ S P+ D + + S D TI+MW+++ G Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV-- 227 Query: 517 HQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSP 693 + GHR + + + G L+AS S D+T+ +W +T+ +L+ H V+ I+++P Sbjct: 228 -KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286 Query: 694 D-------------------------GLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVA 798 + G L S T+K+WD +TG C TL G + Sbjct: 287 ESSYSSISEATGSEEENPRTKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 346 Query: 799 HSCAFTPDGKLLVSGTADQ 855 F GK ++S D+ Sbjct: 347 RGVLFHSGGKFILSCADDK 365 Score = 97.8 bits (242), Expect = 2e-20 Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 1/187 (0%) Frame = +1 Query: 265 LKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSD 444 L GH+ V V F P + S D + +W+ ++G R L GH DS+Q F S Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163 Query: 445 CLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWK 621 LA+ S D TI++WD +G + + GH N+S + G + S S DKTI +W+ Sbjct: 164 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220 Query: 622 PSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAH 801 T + GH WV+ + + DG +AS TV+VW T C L+ V Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280 Query: 802 SCAFTPD 822 ++ P+ Sbjct: 281 CISWAPE 287 Score = 80.9 bits (198), Expect = 2e-15 Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 26/216 (12%) Frame = +1 Query: 181 PDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLW 360 P+G S S D TI++W+V C++ GH+ V V + D +AS D+ V +W Sbjct: 202 PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261 Query: 361 EVQSGQVLRHLVGHRDSIQSSDFAPSSDC-------------------------LATGSW 465 V + + L H ++ +AP S L +GS Sbjct: 262 VVATKECKAELREHEHVVECISWAPESSYSSISEATGSEEENPRTKKSGKPGPFLLSGSR 321 Query: 466 DSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLL 642 D TI+MWD+ G + L GH + + F + G + S + DKT+ +W + + Sbjct: 322 DKTIKMWDVSTGMCLM---TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 378 Query: 643 VQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDC 750 L H +V S+ F + + TVKVW+C Sbjct: 379 KTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 414 Score = 67.4 bits (163), Expect = 3e-11 Identities = 34/103 (33%), Positives = 54/103 (52%) Frame = +1 Query: 187 GRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEV 366 G S S D TI++WDV+ CL L GH V V F K + S DK + +W+ Sbjct: 313 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 372 Query: 367 QSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLR 495 ++ + ++ L H + S DF ++ + TGS D T+++W+ R Sbjct: 373 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 415 >ref|XP_850117.1| PREDICTED: similar to WD repeat domain 5 [Canis familiaris] Length = 334 Score = 117 bits (292), Expect = 3e-26 Identities = 72/237 (30%), Positives = 125/237 (52%), Gaps = 6/237 (2%) Frame = +1 Query: 160 VKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGW 339 V +FSP+G AS+S+D I++W + + + GH+ + V++S DS L S Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107 Query: 340 DKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFH 519 DK + +W+V SG+ L+ L GH + + +F P S+ + +GS+D ++R+WD++ G Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL--- 164 Query: 520 QELEGHRGNISCLCFSAFG-LLASGSWDKTI-HIWKPSTRSLLVQLKGHVTWVKSIAFSP 693 + L H +S + F+ G L+ S S+D ++R + + L V + FSP Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCGKTGNAASRCMKLILDDDNPPVSFVKFSP 224 Query: 694 DGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAF----TPDGKLLVSGTAD 852 +G + +A +T+K+WD + G+C T G + + C F GK +VSG+ D Sbjct: 225 NGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY-CIFANFSVTGGKWIVSGSED 280 Score = 99.0 bits (245), Expect = 8e-21 Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 51/243 (20%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 +S D L S S D T+++WDV+ +CL+ LKGH V +F+P S + SG +D+ V Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDF----------------------------------- 429 +W+V++G+ L+ L H D + + F Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCGKTGNAASRCMKLILDDDN 214 Query: 430 --------APSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLC--FSAFG- 576 +P+ + + D+T+++WD G + GH+ C+ FS G Sbjct: 215 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL---KTYTGHKNEKYCIFANFSVTGG 271 Query: 577 -LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSH--TVKVW- 744 + SGS D ++IW T+ ++ +L+GH V S A P +ASA + T+K+W Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331 Query: 745 -DC 750 DC Sbjct: 332 SDC 334 Score = 95.1 bits (235), Expect = 1e-19 Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 5/201 (2%) Frame = +1 Query: 265 LKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSD 444 L GH ++V +V FSP+ + LAS DK + +W G+ + + GH+ I ++ S+ Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100 Query: 445 CLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFS-AFGLLASGSWDKTIHIWK 621 L + S D T+++WD+ G + L+GH + C F+ L+ SGS+D+++ IW Sbjct: 101 LLVSASDDKTLKIWDVSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157 Query: 622 PSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLD--- 792 T L L H V ++ F+ DG + S+ Y RC +K +LD Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCGKTGNAASRC---MKLILDDDN 214 Query: 793 -VAHSCAFTPDGKLLVSGTAD 852 F+P+GK +++ T D Sbjct: 215 PPVSFVKFSPNGKYILAATLD 235 Score = 75.1 bits (183), Expect = 1e-13 Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 1/112 (0%) Frame = +1 Query: 526 LEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGL 702 L GH +S + FS G LAS S DK I IW + GH + +A+S D Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100 Query: 703 QLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQA 858 L SA T+K+WD ++G+C TLKG + C F P L+VSG+ D++ Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152 Score = 73.6 bits (179), Expect = 4e-13 Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 5/115 (4%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETV--SFS-PDSKQLA 327 PV F +FSP+G+ + + D T++LWD +K +CL+ GH+ + +FS K + Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 275 Query: 328 SGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSW--DSTIRMW 486 SG D V +W +Q+ ++++ L GH D + S+ P+ + +A+ + D TI++W Sbjct: 276 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330 Database: RefSeqCP Posted date: Aug 1, 2006 9:25 PM Number of letters in database: 19,266,565 Number of sequences in database: 33,732 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,763,130 Number of Sequences: 33732 Number of extensions: 1739041 Number of successful extensions: 10581 Number of sequences better than 1.0e-05: 10 Number of HSP's better than 0.0 without gapping: 5454 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8525 length of database: 19,266,565 effective HSP length: 105 effective length of database: 15,724,705 effective search space used: 4591613860 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
Search to RefSeqMP
BLASTX 2.2.10 [Oct-19-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 20060611S-030165 (1194 letters) Database: RefSeqMP 45,328 sequences; 21,768,885 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Alignment gi|NP_083963.1| hypothetical protein LOC76646 [Mus musculus] 367 e-105 Alignment gi|NP_083081.2| katanin p80 (WD40-containing) subunit B 1 [Mus ... 138 1e-32 Alignment gi|NP_796316.1| TAF5 RNA polymerase II, TATA box binding protei... 134 2e-31 Alignment gi|NP_598727.1| TAF5-like RNA polymerase II, p300/CBP-associate... 131 1e-30 Alignment gi|NP_081389.1| WD repeat domain 5B [Mus musculus] 128 1e-29 Alignment gi|NP_082016.1| WD repeat domain 51B [Mus musculus] 127 3e-29 Alignment gi|NP_038653.1| platelet-activating factor acetylhydrolase, iso... 125 1e-28 Alignment gi|XP_987745.1| PREDICTED: similar to platelet-activating facto... 125 1e-28 Alignment gi|NP_543124.1| WD repeat domain 5 [Mus musculus] 122 6e-28 Alignment gi|NP_663406.1| Notchless gene homolog [Mus musculus] 114 3e-25 >ref|NP_083963.1| hypothetical protein LOC76646 [Mus musculus] Length = 303 Score = 367 bits (942), Expect(2) = e-105 Identities = 173/232 (74%), Positives = 198/232 (85%) Frame = +1 Query: 154 GPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASG 333 GPVK C FSPDGRL AS+SSD +IRLWDVA+ +CL VLKGHQRSVETVSFSPDSKQLASG Sbjct: 69 GPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASG 128 Query: 334 GWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAI 513 GWDKR ++WEVQSG+ + LVGH DSIQSSDF+P+SD LATGSWDST+ +WDLR T + Sbjct: 129 GWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVV 188 Query: 514 FHQELEGHRGNISCLCFSAFGLLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSP 693 + LEGH GNISCLC+SA GLLASGSWDKTI +WKP+T +L +QLKGH WV S+AFSP Sbjct: 189 SYHNLEGHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSP 248 Query: 694 DGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTA 849 D L+LASAGYS TVKVWDC TG+C +TLKG+LDVAH+C FTPDGKLLVSG A Sbjct: 249 DELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSGAA 300 Score = 97.1 bits (240), Expect = 3e-20 Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 4/201 (1%) Frame = +1 Query: 274 HQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLA 453 H V +FSPD + L + D V +W +SG++L L GHR ++S F+P +A Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84 Query: 454 TGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPST 630 + S D +IR+WD+ H L+GH+ ++ + FS LASG WDK +W+ + Sbjct: 85 SSSSDHSIRLWDV--ARSKCLH-VLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQS 141 Query: 631 RSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGR---CTDTLKGVLDVAH 801 + L GH ++S FSP LA+ + TV +WD L+G Sbjct: 142 GRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNIS 201 Query: 802 SCAFTPDGKLLVSGTADQARC 864 ++ G LL SG+ D+ C Sbjct: 202 CLCYSASG-LLASGSWDKTIC 221 Score = 92.0 bits (227), Expect = 1e-18 Identities = 58/166 (34%), Positives = 79/166 (47%), Gaps = 1/166 (0%) Frame = +1 Query: 400 HRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG- 576 H + S F+P L T S D + +W + G L GHRG + CFS G Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGR---LLWRLAGHRGPVKSCCFSPDGR 81 Query: 577 LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNT 756 L+AS S D +I +W + L LKGH V++++FSPD QLAS G+ VW+ + Sbjct: 82 LIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQS 141 Query: 757 GRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQARCQVHCKSPRAA 894 GR L G D S F+P L +G+ D VH RA+ Sbjct: 142 GRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDST---VHIWDLRAS 184 Score = 33.1 bits (74), Expect(2) = e-105 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = +2 Query: 86 MNSGAPGTLAVGRVKFYCRHRGE 154 MN AP LAVGRV+FY +H GE Sbjct: 6 MNIRAPTRLAVGRVRFYGQHHGE 28 >ref|NP_083081.2| katanin p80 (WD40-containing) subunit B 1 [Mus musculus] Length = 658 Score = 138 bits (347), Expect = 1e-32 Identities = 81/262 (30%), Positives = 129/262 (49%), Gaps = 2/262 (0%) Frame = +1 Query: 187 GRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEV 366 GRL A+ DC + LW + K C+ L GH VE+V + + + +G + +W++ Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDL 92 Query: 367 QSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGN 546 ++ ++LR L+GH+ +I S DF P + +A+GS D+ I++WD+R G +F GH Sbjct: 93 EAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVF--RYRGHSQA 149 Query: 547 ISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGY 723 + CL FS G LAS + D T+ +W + ++ + GH V + F P+ LAS Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSS 209 Query: 724 SHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQARCQVHCKSPRAAQDN 903 T++ WD + ++G S F PDG L SG D R V+ P D Sbjct: 210 DRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLR--VYGWEPERCFDV 267 Query: 904 I-TRMGQIPVGRDCHSPLPGAA 966 + G++ C+ L G A Sbjct: 268 VLVNWGKVADLAICNDQLIGVA 289 Score = 105 bits (261), Expect = 1e-22 Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 1/208 (0%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGG 336 PV+ R + L + S +IR+WD+ + L+ L GH+ ++ ++ F P + +ASG Sbjct: 65 PVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGS 124 Query: 337 WDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIF 516 D + LW+++ + GH +++ F+P LA+ + D T+++WDL G Sbjct: 125 QDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK---M 181 Query: 517 HQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSP 693 E GH G ++ + F LLASGS D+TI W ++ ++G V+S+ F+P Sbjct: 182 MSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP 241 Query: 694 DGLQLASAGYSHTVKVWDCNTGRCTDTL 777 DG L S G +++V+ RC D + Sbjct: 242 DGCCLYS-GCQDSLRVYGWEPERCFDVV 268 Score = 53.9 bits (128), Expect = 3e-07 Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Frame = +1 Query: 154 GPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASG 333 GPV F P+ L AS SSD TIR WD+ K + + ++G V +V F+PD L SG Sbjct: 190 GPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSG 249 Query: 334 GWDK-RVMLWE 363 D RV WE Sbjct: 250 CQDSLRVYGWE 260 >ref|NP_796316.1| TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa [Mus musculus] Length = 801 Score = 134 bits (337), Expect = 2e-31 Identities = 82/210 (39%), Positives = 107/210 (50%), Gaps = 2/210 (0%) Frame = +1 Query: 124 SEILLPAPRGGPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSF 303 SE+ + GPV FSPD S+S D T+RLW + CL KGH V F Sbjct: 535 SELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQF 594 Query: 304 SPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRM 483 SP SGG D+ LW Q LR GH + + F P+S+ +ATGS D T+R+ Sbjct: 595 SPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 654 Query: 484 WD-LRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKG 657 WD L G IF GH+G I L FS G LA+G+ D + +W ++ +LKG Sbjct: 655 WDVLNGNCVRIF----TGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKG 710 Query: 658 HVTWVKSIAFSPDGLQLASAGYSHTVKVWD 747 H V S+ FS DG LAS +TV++WD Sbjct: 711 HTDTVCSLRFSRDGEILASGSMDNTVRLWD 740 Score = 101 bits (252), Expect = 1e-21 Identities = 69/228 (30%), Positives = 99/228 (43%), Gaps = 5/228 (2%) Frame = +1 Query: 184 DGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWE 363 D L S D R+ D L++L GH V SFSPD L S D V LW Sbjct: 513 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS 572 Query: 364 VQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQE----LE 531 +Q+ L GH + + F+P +G D R+W A H + Sbjct: 573 LQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLW-------ATDHYQPLRIFA 625 Query: 532 GHRGNISCLCFSA-FGLLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQL 708 GH +++C F +A+GS D+T+ +W + + GH + S+ FSP+G L Sbjct: 626 GHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFL 685 Query: 709 ASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTAD 852 A+ V +WD G LKG D S F+ DG++L SG+ D Sbjct: 686 ATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMD 733 Score = 53.9 bits (128), Expect = 3e-07 Identities = 58/243 (23%), Positives = 83/243 (34%), Gaps = 43/243 (17%) Frame = +1 Query: 253 CLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFA 432 C + + V + DS +A G D V +W V ++ R Q+SD + Sbjct: 463 CFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKL-------RSVKQASDLS 515 Query: 433 PSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAF-GLLASGSWDKTI 609 + S D R+ D + + + L GH G + FS L S S D T+ Sbjct: 516 ----LIDKESDDVLERIMDEKTASEL---KILYGHSGPVYGASFSPDRNYLLSSSEDGTV 568 Query: 610 HIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGY---------------------- 723 +W T + LV KGH V FSP G S G+ Sbjct: 569 RLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHL 628 Query: 724 --------------------SHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSG 843 TV++WD G C G HS F+P+G+ L +G Sbjct: 629 ADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATG 688 Query: 844 TAD 852 D Sbjct: 689 ATD 691 >ref|NP_598727.1| TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Mus musculus] Length = 589 Score = 131 bits (330), Expect = 1e-30 Identities = 92/270 (34%), Positives = 124/270 (45%), Gaps = 14/270 (5%) Frame = +1 Query: 88 EQRGPRDAGGGESEILLPAPRG--GPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQ 261 E+ D G E +IL RG GPV RF D S S D +IR WD+ Sbjct: 323 EEENEEDNTGTEMKIL----RGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTV 378 Query: 262 VLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSS 441 + +GH V V SP S ASG D+ LW LR GH + F P+S Sbjct: 379 LYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNS 438 Query: 442 DCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIW 618 + LATGS D T+R+W + G + GHRG + L FS G LAS D+ + +W Sbjct: 439 NYLATGSTDKTVRLWSAQQGNSV---RLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLW 495 Query: 619 KPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWD-----CNT------GRC 765 ++ +L +L+GH + S+AFSPD +ASA ++V+VWD CNT G Sbjct: 496 DLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGEL 555 Query: 766 TDTLKGVLDVAHSCAFTPDGKLLVSGTADQ 855 G + S F LLV+G + Sbjct: 556 VGVYTGQMSNVLSVQFMACNLLLVTGITQE 585 Score = 99.8 bits (247), Expect = 5e-21 Identities = 64/202 (31%), Positives = 96/202 (47%), Gaps = 1/202 (0%) Frame = +1 Query: 256 LQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAP 435 +++L+GH V + F DS L S D + W++ S GH + D +P Sbjct: 335 MKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISP 394 Query: 436 SSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSA-FGLLASGSWDKTIH 612 S A+GS D T R+W + GH ++ C+ F LA+GS DKT+ Sbjct: 395 FSLYFASGSHDRTARLWSFDRTYPLRIYA---GHLADVDCVKFHPNSNYLATGSTDKTVR 451 Query: 613 IWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLD 792 +W + + GH V S++FSP+G LASAG +K+WD +G L+G D Sbjct: 452 LWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTD 511 Query: 793 VAHSCAFTPDGKLLVSGTADQA 858 S AF+PD L+ S + D + Sbjct: 512 SITSLAFSPDSGLIASASMDNS 533 >ref|NP_081389.1| WD repeat domain 5B [Mus musculus] Length = 328 Score = 128 bits (321), Expect = 1e-29 Identities = 78/245 (31%), Positives = 133/245 (54%), Gaps = 8/245 (3%) Frame = +1 Query: 142 APRGGPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQ 321 A + +FSP+G AS+++D I +W C + L GH + V++S DS + Sbjct: 36 AGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSR 95 Query: 322 LASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGG 501 L S DK + +W+++SG+ L+ L GH D + DF P S+ + +GS+D ++++W+++ G Sbjct: 96 LVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTG 155 Query: 502 TGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPST----RSLLVQLKGHVT 666 + L H IS + F+ G L+ SGS+D IW ++ R+L + V+ Sbjct: 156 KCL---KTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVS 212 Query: 667 WVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHS--CAFTPDG-KLLV 837 +VK FSP+G + +A +T+K+WD + GRC T G + + +F+ G K +V Sbjct: 213 FVK---FSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVV 269 Query: 838 SGTAD 852 SG+ D Sbjct: 270 SGSED 274 Score = 107 bits (267), Expect = 2e-23 Identities = 65/201 (32%), Positives = 108/201 (53%), Gaps = 5/201 (2%) Frame = +1 Query: 265 LKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSD 444 L GH ++ +V FSP+ + LAS D +++W G + L GH S++ SD A SSD Sbjct: 35 LAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGH--SLEISDVAWSSD 92 Query: 445 C--LATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFS-AFGLLASGSWDKTIHI 615 L + S D T+++WD+R G + L+GH + C F+ L+ SGS+D+++ I Sbjct: 93 SSRLVSASDDKTLKVWDMRSGKCL---KTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKI 149 Query: 616 WKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTL--KGVL 789 W+ T L L H + ++ F+ +G + S Y ++WD +G+C TL +G Sbjct: 150 WEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNP 209 Query: 790 DVAHSCAFTPDGKLLVSGTAD 852 V+ F+P+GK +++ T D Sbjct: 210 PVSF-VKFSPNGKYILTATLD 229 Score = 103 bits (257), Expect = 4e-22 Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 10/204 (4%) Frame = +1 Query: 169 CRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKR 348 C F+P L S S D ++++W+V +CL+ L H + V+F+ + + SG +D Sbjct: 129 CDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGL 188 Query: 349 VMLWEVQSGQVLRHLVGHRDS-IQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQE 525 +W+ SGQ LR L + + F+P+ + T + D+T+++WD G + Sbjct: 189 CRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCL---KT 245 Query: 526 LEGHRGNISCLCFSAFGL-----LASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFS 690 GH+ CL F++F + + SGS D ++IW T+ ++ +L+GH V S A Sbjct: 246 YTGHKNEKYCL-FASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACH 304 Query: 691 PDGLQLASAGYSH--TVKVW--DC 750 P +ASA + T+KVW DC Sbjct: 305 PTKNIIASAALENDKTIKVWSSDC 328 Score = 75.1 bits (183), Expect = 1e-13 Identities = 44/112 (39%), Positives = 58/112 (51%), Gaps = 1/112 (0%) Frame = +1 Query: 526 LEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGL 702 L GH IS + FS G LAS + D I IW + L GH + +A+S D Sbjct: 35 LAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSS 94 Query: 703 QLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQA 858 +L SA T+KVWD +G+C TLKG D C F P L+VSG+ D++ Sbjct: 95 RLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDES 146 Score = 74.3 bits (181), Expect = 2e-13 Identities = 41/132 (31%), Positives = 71/132 (53%), Gaps = 5/132 (3%) Frame = +1 Query: 106 DAGGGESEILLPAPRGGPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRS 285 DA G+ L PV F +FSP+G+ + + D T++LWD ++ CL+ GH+ Sbjct: 193 DAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNE 252 Query: 286 VETV--SFS-PDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLAT 456 + SFS K + SG D V +W +Q+ ++++ L GH D + S+ P+ + +A+ Sbjct: 253 KYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIAS 312 Query: 457 GSW--DSTIRMW 486 + D TI++W Sbjct: 313 AALENDKTIKVW 324 >ref|NP_082016.1| WD repeat domain 51B [Mus musculus] Length = 476 Score = 127 bits (318), Expect = 3e-29 Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 2/199 (1%) Frame = +1 Query: 268 KGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDC 447 KGH+ ++ + FSP+ KQ+A+ WD +MLW ++ VGH+D + S F+P + Sbjct: 15 KGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNL 74 Query: 448 LATGSWDSTIRMWDL-RGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWK 621 LA+ S D T+R+W L R G + E + H + + FSA G LL + S DK+I +W Sbjct: 75 LASASRDRTVRLWVLDRKGKSS----EFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWS 130 Query: 622 PSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAH 801 + L L H WV+ FSPDG + S T+K+WD +C + + A+ Sbjct: 131 MFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFAN 190 Query: 802 SCAFTPDGKLLVSGTADQA 858 F P+G + S +D A Sbjct: 191 FVDFNPNGTCIASAGSDHA 209 Score = 108 bits (270), Expect = 1e-23 Identities = 75/247 (30%), Positives = 111/247 (44%), Gaps = 8/247 (3%) Frame = +1 Query: 172 RFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRV 351 +FSP G L AS S D T+RLW + + K H V +V FS D + L + DK + Sbjct: 67 QFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSI 126 Query: 352 MLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELE 531 +W + + L L H ++ + F+P + + S D TI++WD T Sbjct: 127 KVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT---TNKQCVNNFS 183 Query: 532 GHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQL 708 G + + F+ G +AS D + IW LL + H V ++F P G L Sbjct: 184 DSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSL 243 Query: 709 ASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQA-------RCQ 867 +A TVK+ D GR TL+G + +F+ DG+LL SG AD Sbjct: 244 VTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWRTNFIH 303 Query: 868 VHCKSPR 888 +HCK P+ Sbjct: 304 LHCKDPK 310 Score = 100 bits (250), Expect = 2e-21 Identities = 75/256 (29%), Positives = 112/256 (43%), Gaps = 8/256 (3%) Frame = +1 Query: 109 AGGGESEILLPAPRG--GPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQR 282 A G E IL + +G + FSP+ + A+ S D + LW + GH+ Sbjct: 2 ASGLEDPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKD 61 Query: 283 SVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGS 462 V ++ FSP LAS D+ V LW + H ++S DF+ L T S Sbjct: 62 VVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTAS 121 Query: 463 WDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSL 639 D +I++W + F L H + C FS G L+ S S DKTI IW + + Sbjct: 122 EDKSIKVWSM---FRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178 Query: 640 LVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSC---- 807 + V + + F+P+G +ASAG H VK+WD + + HSC Sbjct: 179 VNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQ-----VHSCGVNC 233 Query: 808 -AFTPDGKLLVSGTAD 852 +F P G LV+ ++D Sbjct: 234 LSFHPLGNSLVTASSD 249 Score = 97.4 bits (241), Expect = 3e-20 Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 1/200 (0%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGG 336 PV+ FS DG+L + S D +I++W + + L L H V FSPD + + S Sbjct: 104 PVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 163 Query: 337 WDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIF 516 DK + +W+ + Q + + DF P+ C+A+ D +++WD+R Sbjct: 164 EDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNK---L 220 Query: 517 HQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSP 693 Q + H ++CL F G L + S D T+ + L+ L+GH V +++FS Sbjct: 221 LQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSK 280 Query: 694 DGLQLASAGYSHTVKVWDCN 753 DG L S G V +W N Sbjct: 281 DGELLTSGGADAQVLIWRTN 300 Score = 90.1 bits (222), Expect = 4e-18 Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 1/158 (0%) Frame = +1 Query: 385 RHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCF 564 R GH+ +I S+DF+P+ +AT SWD+ + +W L+ A GH+ ++ L F Sbjct: 12 RSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARA---YRYVGHKDVVTSLQF 68 Query: 565 SAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKV 741 S G LLAS S D+T+ +W + + K H V+S+ FS DG L +A ++KV Sbjct: 69 SPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKV 128 Query: 742 WDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQ 855 W R +L F+PDG+L+VS + D+ Sbjct: 129 WSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166 Score = 60.5 bits (145), Expect = 3e-09 Identities = 30/111 (27%), Positives = 54/111 (48%) Frame = +1 Query: 154 GPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASG 333 G F F+P+G AS SD +++WD+ + LQ + H V +SF P L + Sbjct: 187 GFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTA 246 Query: 334 GWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMW 486 D V + ++ G+++ L GH + + F+ + L +G D+ + +W Sbjct: 247 SSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297 >ref|NP_038653.1| platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit [Mus musculus] Length = 410 Score = 125 bits (313), Expect = 1e-28 Identities = 76/248 (30%), Positives = 114/248 (45%), Gaps = 21/248 (8%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 F G+L AS S+D TI+LWD EC++ + GH +V +V+ P+ + S DK + Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 217 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEG 534 +WEVQ+G ++ GHR+ ++ +A+ S D T+R+W + EL Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV---ATKECKAELRE 274 Query: 535 HRGNISCLCFS----------AFG-----------LLASGSWDKTIHIWKPSTRSLLVQL 651 H + C+ ++ A G L SGS DKTI +W ST L+ L Sbjct: 275 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334 Query: 652 KGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKL 831 GH WV+ + F G + S T++VWD RC TL S F Sbjct: 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 394 Query: 832 LVSGTADQ 855 +V+G+ DQ Sbjct: 395 VVTGSVDQ 402 Score = 113 bits (282), Expect = 4e-25 Identities = 75/254 (29%), Positives = 120/254 (47%), Gaps = 21/254 (8%) Frame = +1 Query: 157 PVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGG 336 PV F P + S S D TI++WD + + LKGH SV+ +SF K LAS Sbjct: 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS 169 Query: 337 WDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIF 516 D + LW+ Q + +R + GH ++ S P+ D + + S D TI+MW+++ G Sbjct: 170 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV-- 227 Query: 517 HQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSP 693 + GHR + + + G L+AS S D+T+ +W +T+ +L+ H V+ I+++P Sbjct: 228 -KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286 Query: 694 D--------------------GLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAF 813 + G L S T+K+WD +TG C TL G + F Sbjct: 287 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF 346 Query: 814 TPDGKLLVSGTADQ 855 GK ++S D+ Sbjct: 347 HSGGKFILSCADDK 360 Score = 97.8 bits (242), Expect = 2e-20 Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 1/187 (0%) Frame = +1 Query: 265 LKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSD 444 L GH+ V V F P + S D + +W+ ++G R L GH DS+Q F S Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163 Query: 445 CLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWK 621 LA+ S D TI++WD +G + + GH N+S + G + S S DKTI +W+ Sbjct: 164 LLASCSADMTIKLWDFQGFECI---RTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220 Query: 622 PSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAH 801 T + GH WV+ + + DG +AS TV+VW T C L+ V Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280 Query: 802 SCAFTPD 822 ++ P+ Sbjct: 281 CISWAPE 287 Score = 67.4 bits (163), Expect = 3e-11 Identities = 34/103 (33%), Positives = 54/103 (52%) Frame = +1 Query: 187 GRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEV 366 G S S D TI++WDV+ CL L GH V V F K + S DK + +W+ Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367 Query: 367 QSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLR 495 ++ + ++ L H + S DF ++ + TGS D T+++W+ R Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 >ref|XP_987745.1| PREDICTED: similar to platelet-activating factor acetylhydrolase beta subunit [Mus musculus] Length = 312 Score = 125 bits (313), Expect = 1e-28 Identities = 76/248 (30%), Positives = 114/248 (45%), Gaps = 21/248 (8%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 F G+L AS S+D TI+LWD EC++ + GH +V +V+ P+ + S DK + Sbjct: 60 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIK 119 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEG 534 +WEVQ+G ++ GHR+ ++ +A+ S D T+R+W + EL Sbjct: 120 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV---ATKECKAELRE 176 Query: 535 HRGNISCLCFS----------AFG-----------LLASGSWDKTIHIWKPSTRSLLVQL 651 H + C+ ++ A G L SGS DKTI +W ST L+ L Sbjct: 177 HEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 236 Query: 652 KGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKL 831 GH WV+ + F G + S T++VWD RC TL S F Sbjct: 237 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 296 Query: 832 LVSGTADQ 855 +V+G+ DQ Sbjct: 297 VVTGSVDQ 304 Score = 100 bits (248), Expect = 4e-21 Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 21/230 (9%) Frame = +1 Query: 229 LWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRD 408 +WD + + LKGH SV+ +SF K LAS D + LW+ Q + +R + GH Sbjct: 36 VWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDH 95 Query: 409 SIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLA 585 ++ S P+ D + + S D TI+MW+++ G + GHR + + + G L+A Sbjct: 96 NVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCV---KTFTGHREWVRMVRPNQDGTLIA 152 Query: 586 SGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPD--------------------GLQ 705 S S D+T+ +W +T+ +L+ H V+ I+++P+ G Sbjct: 153 SCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPF 212 Query: 706 LASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQ 855 L S T+K+WD +TG C TL G + F GK ++S D+ Sbjct: 213 LLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK 262 Score = 80.1 bits (196), Expect = 4e-15 Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 21/175 (12%) Frame = +1 Query: 160 VKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQ------ 321 V+ R + DG L AS S+D T+R+W VA EC L+ H+ VE +S++P+S Sbjct: 139 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEA 198 Query: 322 --------------LASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATG 459 L SG DK + +W+V +G L LVGH + ++ F + + Sbjct: 199 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSC 258 Query: 460 SWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCF-SAFGLLASGSWDKTIHIWK 621 + D T+R+WD + + L H ++ L F + +GS D+T+ +W+ Sbjct: 259 ADDKTLRVWDYKNKR---CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 310 Score = 67.4 bits (163), Expect = 3e-11 Identities = 34/103 (33%), Positives = 54/103 (52%) Frame = +1 Query: 187 GRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEV 366 G S S D TI++WDV+ CL L GH V V F K + S DK + +W+ Sbjct: 210 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 269 Query: 367 QSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLR 495 ++ + ++ L H + S DF ++ + TGS D T+++W+ R Sbjct: 270 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 312 >ref|NP_543124.1| WD repeat domain 5 [Mus musculus] Length = 334 Score = 122 bits (307), Expect = 6e-28 Identities = 75/240 (31%), Positives = 130/240 (54%), Gaps = 9/240 (3%) Frame = +1 Query: 160 VKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGW 339 V +FSP+G AS+S+D I++W + + + GH+ + V++S DS L S Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD 107 Query: 340 DKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFH 519 DK + +W+V SG+ L+ L GH + + +F P S+ + +GS+D ++R+WD++ G Sbjct: 108 DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL--- 164 Query: 520 QELEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPST----RSLLVQLKGHVTWVKSIA 684 + L H +S + F+ G L+ S S+D IW ++ ++L+ V++VK Sbjct: 165 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVK--- 221 Query: 685 FSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAF----TPDGKLLVSGTAD 852 FSP+G + +A +T+K+WD + G+C T G + + C F GK +VSG+ D Sbjct: 222 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY-CIFANFSVTGGKWIVSGSED 280 Score = 108 bits (270), Expect = 1e-23 Identities = 61/198 (30%), Positives = 104/198 (52%), Gaps = 2/198 (1%) Frame = +1 Query: 265 LKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQSSDFAPSSD 444 L GH ++V +V FSP+ + LAS DK + +W G+ + + GH+ I ++ S+ Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100 Query: 445 CLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFS-AFGLLASGSWDKTIHIWK 621 L + S D T+++WD+ G + L+GH + C F+ L+ SGS+D+++ IW Sbjct: 101 LLVSASDDKTLKIWDVSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157 Query: 622 PSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAH 801 T L L H V ++ F+ DG + S+ Y ++WD +G+C TL + Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 217 Query: 802 S-CAFTPDGKLLVSGTAD 852 S F+P+GK +++ T D Sbjct: 218 SFVKFSPNGKYILAATLD 235 Score = 105 bits (261), Expect = 1e-22 Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 5/231 (2%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 +S D L S S D T+++WDV+ +CL+ LKGH V +F+P S + SG +D+ V Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154 Query: 355 LWEVQSGQVLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEG 534 +W+V++G+ L+ L H D + + F + + S+D R+WD +G ++ Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT--ASGQCLKTLIDD 212 Query: 535 HRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFS----PDG 699 +S + FS G + + + D T+ +W S L GH K F+ G Sbjct: 213 DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN-EKYCIFANFSVTGG 271 Query: 700 LQLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTAD 852 + S + V +W+ T L+G DV S A P ++ S + Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322 Score = 77.0 bits (188), Expect = 4e-14 Identities = 57/179 (31%), Positives = 87/179 (48%), Gaps = 7/179 (3%) Frame = +1 Query: 106 DAGGGESEILLPAPRGGPVKFCRFSPDGRLFASTSSDCTIRLWDVAKVECLQVL-KGHQR 282 D G+ LPA PV F+ DG L S+S D R+WD A +CL+ L Sbjct: 157 DVKTGKCLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215 Query: 283 SVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDS---IQSSDFAPSSDCLA 453 V V FSP+ K + + D + LW+ G+ L+ GH++ I ++ + Sbjct: 216 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 275 Query: 454 TGSWDSTIRMWDLRGGTGAIFHQELEGHRG-NISCLCFSAFGLLASGSW--DKTIHIWK 621 +GS D+ + +W+L+ T I Q+L+GH IS C ++AS + DKTI +WK Sbjct: 276 SGSEDNLVYIWNLQ--TKEIV-QKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 331 Score = 75.1 bits (183), Expect = 1e-13 Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 1/112 (0%) Frame = +1 Query: 526 LEGHRGNISCLCFSAFG-LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGL 702 L GH +S + FS G LAS S DK I IW + GH + +A+S D Sbjct: 41 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 100 Query: 703 QLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQA 858 L SA T+K+WD ++G+C TLKG + C F P L+VSG+ D++ Sbjct: 101 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152 >ref|NP_663406.1| Notchless gene homolog [Mus musculus] Length = 485 Score = 114 bits (284), Expect = 3e-25 Identities = 67/180 (37%), Positives = 101/180 (56%), Gaps = 6/180 (3%) Frame = +1 Query: 175 FSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVM 354 FSP G+ AS S D T+R WD++ KGH+ V ++S+SPD K+LASG + +++ Sbjct: 122 FSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQIL 181 Query: 355 LWEVQSG-QVLRHLVGHRDSIQSSDFAP---SSDC--LATGSWDSTIRMWDLRGGTGAIF 516 LW+ +G QV R L GH I + P + +C +A+ S D ++R+WD G Sbjct: 182 LWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGR---C 238 Query: 517 HQELEGHRGNISCLCFSAFGLLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPD 696 + L GH +++CL + GLL S S D+TI +W+ L L+GH WV ++A S D Sbjct: 239 ERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298 Score = 110 bits (276), Expect = 2e-24 Identities = 74/246 (30%), Positives = 127/246 (51%), Gaps = 5/246 (2%) Frame = +1 Query: 178 SPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVML 357 +P+ R AS+S D ++R+WD C ++L GH +SV + + D L S D+ + + Sbjct: 213 NPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKV 271 Query: 358 WEVQSGQVLRHLVGHRDSIQSSDFAPSSD-CLATGSWD---STIRMWDLRGGTGAIFHQE 525 W G + R L GH + + A S+D L TG+++ +T+ DL+G + +E Sbjct: 272 WRAHDGVLCRTLQGHGHWVNT--MALSTDYALRTGAFEPAEATVNAQDLQGSLKEL--KE 327 Query: 526 LEGHRGNISCLCFSAFGLLASGSWDKTIHIWKPST-RSLLVQLKGHVTWVKSIAFSPDGL 702 R N+ + L SGS D T+ +W P+ + L ++ GH + + FSPD Sbjct: 328 RASSRYNL--VRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSR 385 Query: 703 QLASAGYSHTVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGKLLVSGTADQARCQVHCKS 882 +ASA + ++K+WD TG+ +L+G + + A++ D +LLVSG++D K+ Sbjct: 386 IVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKA 445 Query: 883 PRAAQD 900 + A D Sbjct: 446 QKLATD 451 Score = 85.9 bits (211), Expect = 8e-17 Identities = 64/235 (27%), Positives = 101/235 (42%), Gaps = 44/235 (18%) Frame = +1 Query: 172 RFSPDGRLFASTSSDCTIRLWDVAKVECLQVLKGHQRSVETVSFSPD------------- 312 R+ DG L+ S S D TI++W + L+GH V T++ S D Sbjct: 253 RWGGDGLLY-SASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEA 311 Query: 313 -----------------------------SKQLASGGWDKRVMLWE-VQSGQVLRHLVGH 402 ++L SG D + LW + + L + GH Sbjct: 312 TVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGH 371 Query: 403 RDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-L 579 + I F+P S +A+ S+D +I++WD R G + L GH + + +SA L Sbjct: 372 QALINQVLFSPDSRIVASASFDKSIKLWDGRTGK---YLASLRGHVAAVYQIAWSADSRL 428 Query: 580 LASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVW 744 L SGS D T+ +W + L L GH V ++ +SPDG ++AS G +++W Sbjct: 429 LVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483 Score = 84.3 bits (207), Expect = 2e-16 Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 6/219 (2%) Frame = +1 Query: 241 AKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQVLRHLVGHRDSIQS 420 A C L+GH +V +V+FSP K LASG D V W++ + GHR + S Sbjct: 102 AVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLS 161 Query: 421 SDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFGL------L 582 ++P LA+G + I +WD TG + L GH I+ L + + + Sbjct: 162 ISWSPDGKKLASGCKNGQILLWD--PSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYV 219 Query: 583 ASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDGLQLASAGYSHTVKVWDCNTGR 762 AS S D ++ +W + L GH V + + DGL L SA T+KVW + G Sbjct: 220 ASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAHDGV 278 Query: 763 CTDTLKGVLDVAHSCAFTPDGKLLVSGTADQARCQVHCK 879 TL+G ++ A + D L +G + A V+ + Sbjct: 279 LCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEATVNAQ 316 Score = 83.2 bits (204), Expect = 5e-16 Identities = 50/142 (35%), Positives = 80/142 (56%), Gaps = 2/142 (1%) Frame = +1 Query: 202 STSSDCTIRLWDVAK-VECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEVQSGQ 378 S S D T+ LW A+ + L + GHQ + V FSPDS+ +AS +DK + LW+ ++G+ Sbjct: 346 SGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGK 405 Query: 379 VLRHLVGHRDSIQSSDFAPSSDCLATGSWDSTIRMWDLRGGTGAIFHQELEGHRGNISCL 558 L L GH ++ ++ S L +GS DST+++WD++ A +L GH + + Sbjct: 406 YLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAT---DLPGHADEVYAV 462 Query: 559 CFSAFGL-LASGSWDKTIHIWK 621 +S G +ASG DK + IW+ Sbjct: 463 DWSPDGQRVASGGKDKCLRIWR 484 Database: RefSeqMP Posted date: Aug 2, 2006 12:58 AM Number of letters in database: 21,768,885 Number of sequences in database: 45,328 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,474,544 Number of Sequences: 45328 Number of extensions: 1935538 Number of successful extensions: 10634 Number of sequences better than 1.0e-05: 10 Number of HSP's better than 0.0 without gapping: 6140 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9012 length of database: 21,768,885 effective HSP length: 106 effective length of database: 16,964,117 effective search space used: 4936558047 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)