Animal-Genome cDNA 20060611S-030411


Search to RefSeqSP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-030411
         (1207 letters)

Database: RefSeqSP 
           1040 sequences; 434,620 total letters

Searching...done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_998988.1| pancreatic elastase I [Sus scrofa]                   535   e-154
Alignment   gi|NP_999274.1| pancreatic elastase II [Sus scrofa]                  296   9e-82
Alignment   gi|NP_999356.1| tryptase [Sus scrofa]                                155   2e-39
Alignment   gi|NP_999239.1| kallikrein [Sus scrofa]                              136   9e-34
Alignment   gi|NP_998959.1| tryptase [Sus scrofa]                                131   4e-32
Alignment   gi|NP_999198.1| preproacrosin [Sus scrofa]                           128   2e-31
Alignment   gi|NP_001001259.1| enteropeptidase, light chain (L chain) [Sus ...   117   4e-28
Alignment   gi|NP_001001911.1| kallikrein 1, renal/pancreas/salivary [Sus s...   117   7e-28
Alignment   gi|NP_999110.1| plasminogen activator [Sus scrofa]                   108   3e-25
Alignment   gi|NP_999219.1| T-plasminogen activator [Sus scrofa]                 106   1e-24

>ref|NP_998988.1| pancreatic elastase I [Sus scrofa]
          Length = 266

 Score =  535 bits (1379), Expect = e-154
 Identities = 261/266 (98%), Positives = 262/266 (98%)
 Frame = +2

Query: 92  MLRLLVVASLVLYGHSTQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTL 271
           MLRLLVVASLVLYGHSTQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTL
Sbjct: 1   MLRLLVVASLVLYGHSTQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTL 60

Query: 272 IRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDI 451
           IRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDI
Sbjct: 61  IRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDI 120

Query: 452 ALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVD 631
           ALLRL QSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVD
Sbjct: 121 ALLRLGQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVD 180

Query: 632 YAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGC 811
           YAI SSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGC
Sbjct: 181 YAILSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGC 240

Query: 812 NVTRKPPVFTRVSAYIS*INNVVASN 889
           NVTRKP VFTRVSAYIS INNV+ASN
Sbjct: 241 NVTRKPTVFTRVSAYISWINNVIASN 266


>ref|NP_999274.1| pancreatic elastase II [Sus scrofa]
          Length = 269

 Score =  296 bits (757), Expect = 9e-82
 Identities = 147/270 (54%), Positives = 186/270 (68%), Gaps = 4/270 (1%)
 Frame = +2

Query: 92  MLRLLVVASLVLYGHST---QDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCG 262
           M+R L++++LV    S     + P+   RVVGG +A+ NSWP Q+SLQY S   W HTCG
Sbjct: 1   MIRALLLSTLVAGALSCGLPANLPQL-PRVVGGEDARPNSWPWQVSLQYDSSGQWRHTCG 59

Query: 263 GTLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAG 442
           GTL+ Q+WV+TAAHC+    T+RVV+G H+L+ N+     V V K+VVH  WN++ ++ G
Sbjct: 60  GTLVDQSWVLTAAHCISSSRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNG 119

Query: 443 YDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLP 622
            DIALL+LA  V+L   +QLG LP AGTIL NN  CY+TGWG  +TNG     LQQ  L 
Sbjct: 120 NDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLL 179

Query: 623 TVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCL-VNGQYAVHGVTSFVS 799
            VDYA CS   +WGSTVK +M+CAGGDG+ S C GDSGGPL+C   NGQ+ VHG+ SF S
Sbjct: 180 VVDYATCSKPGWWGSTVKTNMICAGGDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGS 239

Query: 800 RLGCNVTRKPPVFTRVSAYIS*INNVVASN 889
            LGCN   KP VFTRVS YI  IN+V+A+N
Sbjct: 240 SLGCNYYHKPSVFTRVSNYIDWINSVIANN 269


>ref|NP_999356.1| tryptase [Sus scrofa]
          Length = 275

 Score =  155 bits (391), Expect = 2e-39
 Identities = 106/280 (37%), Positives = 147/280 (52%), Gaps = 17/280 (6%)
 Frame = +2

Query: 92  MLRLLVVAS--LVLYGHSTQDFPET--NARVVGGTEAQRNSWPSQISLQYRSGSSWAHTC 259
           ML LLV+A   LV   H+     +    A +VGG EA  + WP Q+SL+      W H C
Sbjct: 1   MLNLLVLALPLLVSLVHTAPAPGQALERAGIVGGKEAPGHKWPWQVSLRCLD-QYWKHFC 59

Query: 260 GGTLIRQNWVMTAAHCVDRE----LTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTD 427
           GG+LI   WV+TAAHC   E    L  RV +GE +L   D   + + V +I+VHP  N  
Sbjct: 60  GGSLIHPQWVLTAAHCFGPEKADPLYIRVQLGEQHLYYQD---RLLLVSRIIVHP--NYY 114

Query: 428 DVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQL--AQT 601
           D   G DIALL L   V L+S+VQ   LP A       + C++TGWG   +   L     
Sbjct: 115 DEVNGADIALLELEDPVNLSSHVQPVTLPPASETFPKGTRCWVTGWGDVHSGWPLPPPYP 174

Query: 602 LQQAYLPTVDYAICSSSSYWGST-------VKNSMVCAGGDGVRSGCQGDSGGPLHCLVN 760
           L+Q  +P V+ + C    + G +       V++ M+CAG +G    CQGDSGGPL C VN
Sbjct: 175 LKQVRVPIVENSECDMQYHLGLSTGDNIPIVRDDMLCAGSEG-HDSCQGDSGGPLVCRVN 233

Query: 761 GQYAVHGVTSFVSRLGCNVTRKPPVFTRVSAYIS*INNVV 880
           G +   GV S+    GC +  +P ++TRV+ Y+  I+  +
Sbjct: 234 GTWLQAGVVSWGE--GCALPNRPGIYTRVTHYLDWIHQCI 271


>ref|NP_999239.1| kallikrein [Sus scrofa]
          Length = 643

 Score =  136 bits (343), Expect = 9e-34
 Identities = 80/239 (33%), Positives = 127/239 (53%), Gaps = 4/239 (1%)
 Frame = +2

Query: 155  ETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRELT--- 325
            + N R+VGGT++    WP Q+SLQ +  +   H CGG++I   WV+TAAHC D       
Sbjct: 394  KANTRIVGGTDSFLGEWPWQVSLQAKLRAQ-NHLCGGSIIGHQWVLTAAHCFDGLSLPDI 452

Query: 326  FRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLG 505
            +R+  G  N+++      +  V++I++H   N   + +G+DIALL+L   +    + +  
Sbjct: 453  WRIYGGILNISEITKETPFSQVKEIIIHQ--NYKILESGHDIALLKLETPLNYTDFQKPI 510

Query: 506  VLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSM 685
             LP         + C++TGWG T   G++   LQ+  +P V    C  S Y    +   M
Sbjct: 511  CLPSRDDTNVVYTNCWVTGWGFTEEKGEIQNILQKVNIPLVSNEECQKS-YRDHKISKQM 569

Query: 686  VCAG-GDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPPVFTRVSAYI 859
            +CAG  +G +  C+G+SGGPL C  NG + + G TS+    GC    +P V+T+V  Y+
Sbjct: 570  ICAGYKEGGKDACKGESGGPLVCKYNGIWHLVGTTSWGE--GCARREQPGVYTKVIEYM 626


>ref|NP_998959.1| tryptase [Sus scrofa]
          Length = 277

 Score =  131 bits (329), Expect = 4e-32
 Identities = 91/248 (36%), Positives = 127/248 (51%), Gaps = 11/248 (4%)
 Frame = +2

Query: 170 VVGGTEAQRNSWPSQISLQ-YRSG-SSWAHTCGGTLIRQNWVMTAAHCVD----RELTFR 331
           +VGG +     +P Q+SL+ YR     W H CGG+L+   WV+TAAHCVD    +    R
Sbjct: 31  IVGGHDVSTWKYPWQVSLRSYRVKLGRWMHHCGGSLVHPQWVLTAAHCVDSHNLKPQDVR 90

Query: 332 VVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVL 511
           V VG+  L   D   Q   V++I+ HP +       G DIALL+L   +TL++ V +   
Sbjct: 91  VQVGQLKLYDGD---QLTKVKQIIRHPKY-LGFAKGGADIALLQLEAPLTLSARVNVVGT 146

Query: 512 PRAGTILANNSPCYITGWGLTRTNGQLAQT--LQQAYLPTVDYAICSSSSYWG---STVK 676
           P A   +     C +TGWG  + N  L     LQ+  +P V   +C+     G     +K
Sbjct: 147 PSATLKVPKGKRCSVTGWGNIKHNLSLPPPYHLQEVEVPIVANKVCNKHYRTGPNSKPIK 206

Query: 677 NSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPPVFTRVSAY 856
             M+CAG  G+ S CQGDSGGPL C  NG +   G+ S+    GC +   P V+ RV +Y
Sbjct: 207 ADMLCAGSKGLDS-CQGDSGGPLMCSWNGTWVQVGIVSW--GRGCGLHNFPGVYIRVMSY 263

Query: 857 IS*INNVV 880
           +S I   V
Sbjct: 264 VSWIYQYV 271


>ref|NP_999198.1| preproacrosin [Sus scrofa]
          Length = 400

 Score =  128 bits (322), Expect = 2e-31
 Identities = 95/294 (32%), Positives = 152/294 (51%), Gaps = 31/294 (10%)
 Frame = +2

Query: 101 LLVVASLVLYGHSTQDFP---------ETNARVVGGTEAQRNSWPSQISLQ---YRSGSS 244
           L++  S+    ++T D P         E+  RVVGG  A+  +WP  +SLQ   Y +   
Sbjct: 7   LVLAVSVAARDNATCDGPCGLRFRQKLESGMRVVGGMSAEPGAWPWMVSLQIFMYHNNRR 66

Query: 245 WAHTCGGTLIRQNWVMTAAHC-------VDRELTF---RVVVGEHNLNQNDGTEQYVGVQ 394
           + HTCGG L+  +WV+TAAHC        D  L F    VV G +   +    E++  V+
Sbjct: 67  Y-HTCGGILLNSHWVLTAAHCFKNKKKVTDWRLIFGANEVVWGSNKPVKPPLQERF--VE 123

Query: 395 KIVVHPYWNTDDVAAGY---DIALLRLAQSVTLNSYVQLGVLP--RAGTILANNSPCYIT 559
           +I++H     +   +G    DIAL+++   V    ++  G LP  +AG   A  + C++T
Sbjct: 124 EIIIH-----EKYVSGLEINDIALIKITPPVPCGPFIGPGCLPQFKAGPPRAPQT-CWVT 177

Query: 560 GWGLTRTNG-QLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAG-GDGVRSGCQGDS 733
           GWG  +  G + + TLQ+A +  +D  +C+S+ ++   V ++ VCAG   G    CQGDS
Sbjct: 178 GWGYLKEKGPRTSPTLQEARVALIDLELCNSTQWYNGRVTSTNVCAGYPRGKIDTCQGDS 237

Query: 734 GGPLHC--LVNGQYAVHGVTSFVSRLGCNVTRKPPVFTRVSAYIS*INNVVASN 889
           GGPL C       + V G+TS+   +GC   ++P V+T    Y++ I + + SN
Sbjct: 238 GGPLMCRDRAENTFVVVGITSW--GVGCARAKRPGVYTSTWPYLNWIASKIGSN 289


>ref|NP_001001259.1| enteropeptidase, light chain (L chain) [Sus scrofa]
          Length = 1034

 Score =  117 bits (294), Expect = 4e-28
 Identities = 77/241 (31%), Positives = 125/241 (51%), Gaps = 7/241 (2%)
 Frame = +2

Query: 155  ETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCV-DRELT-- 325
            E + ++VGG +++  +WP  ++L Y         CG +L+ ++W+++AAHCV  R L   
Sbjct: 795  EVSPKIVGGNDSREGAWPWVVALYYNGQL----LCGASLVSRDWLVSAAHCVYGRNLEPS 850

Query: 326  -FRVVVGEHNLNQNDGTEQYVG--VQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYV 496
             ++ ++G H +  N  + Q V   + +IV++P++N     +  DIA++ L   V    Y+
Sbjct: 851  KWKAILGLH-MTSNLTSPQIVTRLIDEIVINPHYNRRRKDS--DIAMMHLEFKVNYTDYI 907

Query: 497  QLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVK 676
            Q   LP    +      C I GWG     G  A  LQ+A +P +    C       +  +
Sbjct: 908  QPICLPEENQVFPPGRICSIAGWGKVIYQGSPADILQEADVPLLSNEKCQQQMPEYNITE 967

Query: 677  NSMVCAG-GDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPPVFTRVSA 853
            N M+CAG  +G    CQGDSGGPL CL N ++ + GVTSF  +  C +  +P V+ RV  
Sbjct: 968  N-MMCAGYEEGGIDSCQGDSGGPLMCLENNRWLLAGVTSFGYQ--CALPNRPGVYARVPK 1024

Query: 854  Y 856
            +
Sbjct: 1025 F 1025


>ref|NP_001001911.1| kallikrein 1, renal/pancreas/salivary [Sus scrofa]
          Length = 263

 Score =  117 bits (292), Expect = 7e-28
 Identities = 84/274 (30%), Positives = 130/274 (47%), Gaps = 13/274 (4%)
 Frame = +2

Query: 107 VVASLVLYGHSTQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNW 286
           +V  L L    T   P   +R++GG E +++S P Q+++ + S    +  CGG L+   W
Sbjct: 4   LVMRLALSLAGTGAAPPIQSRIIGGRECEKDSHPWQVAIYHYS----SFQCGGVLVDPKW 59

Query: 287 VMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWN---------TDDVAA 439
           V+TAAHC  +   ++V +G HNL +N+ T Q+ GV     HP +N          D    
Sbjct: 60  VLTAAHC--KNDNYQVWLGRHNLFENEVTAQFFGVTADFPHPGFNLSLLKNHTKADGKDY 117

Query: 440 GYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTR---TNGQLAQTLQQ 610
            +D+ LLRL     +   V++  LP     L   S C  +GWG       + +    +Q 
Sbjct: 118 SHDLMLLRLQSPAKITDAVKVLELPTQEPEL--GSTCQASGWGSIEPGPDDFEFPDEIQC 175

Query: 611 AYLPTVDYAICSSSSYWGSTVKNSMVCAGG-DGVRSGCQGDSGGPLHCLVNGQYAVHGVT 787
             L  +    C+ +      V  SM+CAG   G +  C GDSGGPL C  NG +   G+T
Sbjct: 176 VELTLLQNTFCADAH--PDKVTESMLCAGYLPGGKDTCMGDSGGPLIC--NGMW--QGIT 229

Query: 788 SFVSRLGCNVTRKPPVFTRVSAYIS*INNVVASN 889
           S+     C    KP ++T++  Y+  IN+ +  N
Sbjct: 230 SW-GHTPCGSANKPSIYTKLIFYLDWINDTITEN 262


>ref|NP_999110.1| plasminogen activator [Sus scrofa]
          Length = 442

 Score =  108 bits (270), Expect = 3e-25
 Identities = 75/249 (30%), Positives = 122/249 (48%), Gaps = 11/249 (4%)
 Frame = +2

Query: 167 RVVGG--TEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCV---DRELTFR 331
           ++VGG  T  +   W + I  ++R GS   + CGG+LI   WV++A HC      +  + 
Sbjct: 189 KIVGGKSTTIENQPWFAAIYRRHRGGSV-TYVCGGSLISPCWVVSATHCFINYQHKEDYI 247

Query: 332 VVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRL----AQSVTLNSYVQ 499
           V +G   L+ +   E    V+K+++H  ++ D +A   DIALL++     Q    +  +Q
Sbjct: 248 VYLGRQTLHSSTHGEMKFEVEKLILHEDYSADSLAHHNDIALLKIRTDKGQCAQPSRSIQ 307

Query: 500 LGVLPRAGTILANNSPCYITGWGLTRTNGQL-AQTLQQAYLPTVDYAICSSSSYWGSTVK 676
              LP         + C I G+G    +  L  + L+   +  V +  C    Y+GS V 
Sbjct: 308 TICLPPVNGDAHFGASCEIVGFGKEDPSDYLYPEQLKMTVVKLVSHRECQQPHYYGSEVT 367

Query: 677 NSMVCAGGDGVRS-GCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPPVFTRVSA 853
             M+CA     ++  CQGDSGGPL C   G+  + G+ S+     C +  KP V+TRVS 
Sbjct: 368 TKMLCAADPQWKTDSCQGDSGGPLVCSTQGRLTLTGIVSWGRE--CAMKDKPGVYTRVSR 425

Query: 854 YIS*INNVV 880
           +++ I+  V
Sbjct: 426 FLTWIHTHV 434


>ref|NP_999219.1| T-plasminogen activator [Sus scrofa]
          Length = 562

 Score =  106 bits (265), Expect = 1e-24
 Identities = 82/261 (31%), Positives = 127/261 (48%), Gaps = 17/261 (6%)
 Frame = +2

Query: 143  QDFPETNARVVGGTEAQRNS--WPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDR 316
            + + E   R+ GG  A   S  W + I ++ R        CGG LI   WV++AAHC   
Sbjct: 302  RQYKEPQFRIKGGLYADITSHPWQAAIFVKNRRSPGERFLCGGILISSCWVLSAAHCFQE 361

Query: 317  ELT---FRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRL-AQSVTL 484
                   RVV+G          EQ   V+K +VH  +  DD     DIALL+L + S+T 
Sbjct: 362  RFPPHHVRVVLGRTYRLVPGEEEQAFEVEKYIVHKEF--DDDTYDNDIALLQLKSDSLTC 419

Query: 485  ---NSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQL-AQTLQQAYLPTVDYAICSSS 652
               +  V+   LP A   L + + C ++G+G    +    ++ L++A++     + C+S 
Sbjct: 420  AQESDAVRTVCLPEANLQLPDWTECELSGYGKHEASSPFYSERLKEAHVRLYPSSRCTSK 479

Query: 653  SYWGSTVKNSMVCA-----GGD--GVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGC 811
              +  T+ N+M+CA     GGD   +   CQGDSGGPL C+      + GV S+   LGC
Sbjct: 480  HLFNKTITNNMLCAGDTRSGGDNANLHDACQGDSGGPLVCMKGNHMTLVGVISW--GLGC 537

Query: 812  NVTRKPPVFTRVSAYIS*INN 874
                 P V+T+V+ Y++ I +
Sbjct: 538  GQKDVPGVYTKVTNYLNWIRD 558


  Database: RefSeqSP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 434,620
  Number of sequences in database:  1040
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,137,044
Number of Sequences: 1040
Number of extensions: 32356
Number of successful extensions: 143
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109
length of database: 434,620
effective HSP length: 79
effective length of database: 352,460
effective search space used: 113492120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqBP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-030411
         (1207 letters)

Database: RefSeqBP 
           33,508 sequences; 16,112,626 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_776473.1| elastase 1, pancreatic [Bos taurus]                  479   e-135
Alignment   gi|NP_777139.1| elastase 2 [Bos taurus]                              295   5e-80
Alignment   gi|XP_592291.2| PREDICTED: similar to elastase 3B preproprotein...   265   4e-71
Alignment   gi|XP_869711.1| PREDICTED: similar to elastase 3B preproprotein...   264   1e-70
Alignment   gi|XP_591837.1| PREDICTED: similar to Caldecrin precursor (Chym...   261   1e-69
Alignment   gi|XP_608091.2| PREDICTED: similar to Chymotrypsinogen B precur...   157   1e-38
Alignment   gi|NP_776627.1| tryptase alpha/beta 1 [Bos taurus]                   156   4e-38
Alignment   gi|NP_776376.1| plasminogen [Bos taurus]                             154   1e-37
Alignment   gi|XP_584887.2| PREDICTED: similar to Serine protease hepsin (T...   145   5e-35
Alignment   gi|XP_607560.2| PREDICTED: similar to Transmembrane protease, s...   145   5e-35

>ref|NP_776473.1| elastase 1, pancreatic [Bos taurus]
          Length = 266

 Score =  479 bits (1232), Expect = e-135
 Identities = 225/266 (84%), Positives = 248/266 (93%)
 Frame = +2

Query: 92  MLRLLVVASLVLYGHSTQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTL 271
           MLRLLV  SLVLYGHSTQDFPETNARVVGGT   +NSWPSQISLQY+SGSSW HTCGGTL
Sbjct: 1   MLRLLVFTSLVLYGHSTQDFPETNARVVGGTAVSKNSWPSQISLQYKSGSSWYHTCGGTL 60

Query: 272 IRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDI 451
           I+Q WVMTAAHCVD ++TFRVV+G+HNL+QNDGTEQY+ VQKIVVHP WN+++VAAGYDI
Sbjct: 61  IKQKWVMTAAHCVDSQMTFRVVLGDHNLSQNDGTEQYISVQKIVVHPSWNSNNVAAGYDI 120

Query: 452 ALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVD 631
           A+LRLAQS TLNSYVQLGVLP++GTILANN+PCYITGWG T+TNGQLAQTLQQAYLP+VD
Sbjct: 121 AVLRLAQSATLNSYVQLGVLPQSGTILANNTPCYITGWGRTKTNGQLAQTLQQAYLPSVD 180

Query: 632 YAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGC 811
           YA CSSSSYWGSTVK +MVCAGGDGVR+GCQGDSGGPLHCLVNGQYAVHGVTSFVS LGC
Sbjct: 181 YATCSSSSYWGSTVKTTMVCAGGDGVRAGCQGDSGGPLHCLVNGQYAVHGVTSFVSSLGC 240

Query: 812 NVTRKPPVFTRVSAYIS*INNVVASN 889
           NV++KP VFTRVSAYIS INN +ASN
Sbjct: 241 NVSKKPTVFTRVSAYISWINNAIASN 266


>ref|NP_777139.1| elastase 2 [Bos taurus]
          Length = 269

 Score =  295 bits (755), Expect = 5e-80
 Identities = 146/269 (54%), Positives = 184/269 (68%), Gaps = 3/269 (1%)
 Frame = +2

Query: 92  MLRLLVVASLVLYGHS--TQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGG 265
           M+R L++++LV    S     +P   +RVVGG +A+ NSWP Q+SLQY S   W HTCGG
Sbjct: 1   MIRALLLSTLVAGALSCGVPTYPPQLSRVVGGEDARPNSWPWQVSLQYSSSGQWRHTCGG 60

Query: 266 TLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGY 445
           +LI QNWV+TAAHC+    T+RVVVG  +L+  +     + V K V+H  WN++ +A G 
Sbjct: 61  SLIEQNWVLTAAHCISSSRTYRVVVGRQSLSTVESGSLTIAVSKSVIHEKWNSNQLAQGN 120

Query: 446 DIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPT 625
           DIALL+LA SV L   +QLG LP AGTIL NN  CY+TGWG  ++NG L   LQQ  L  
Sbjct: 121 DIALLKLASSVPLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQSNGALPDILQQGKLLV 180

Query: 626 VDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHC-LVNGQYAVHGVTSFVSR 802
           VDYA CS+ S+WGSTVK +M+CAGGDGV S C GDSGGPL+C   N Q+ VHG+ SF S 
Sbjct: 181 VDYATCSNPSWWGSTVKTNMICAGGDGVTSSCNGDSGGPLNCQAANRQWQVHGIVSFGSS 240

Query: 803 LGCNVTRKPPVFTRVSAYIS*INNVVASN 889
           LGCN  RKP VFTRVS Y   I++V+ +N
Sbjct: 241 LGCNYYRKPSVFTRVSNYNDWISSVIENN 269


>ref|XP_592291.2| PREDICTED: similar to elastase 3B preproprotein isoform 1 [Bos
           taurus]
          Length = 269

 Score =  265 bits (678), Expect = 4e-71
 Identities = 137/270 (50%), Positives = 179/270 (66%), Gaps = 4/270 (1%)
 Frame = +2

Query: 92  MLRLLVVASLV-LYGHSTQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGT 268
           M++LL    LV L    +Q F   ++RVV G +A   SW  Q+SLQY    ++ HTCGG+
Sbjct: 1   MIQLLSFLLLVALASGFSQPFSRPSSRVVNGEDAVPYSWSWQVSLQYEKDGAFHHTCGGS 60

Query: 269 LIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQK--IVVHPYWNTDDVAAG 442
           LI  +WV+TA HC+    T++VV+GE++ +  +G+EQ + +    + VHP WN++ VA G
Sbjct: 61  LIAPDWVVTAGHCISTSRTYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACG 120

Query: 443 YDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLP 622
            DIAL++L++S  L   VQL  LP AG IL N +PCYI+GWG   T G L   LQ+A LP
Sbjct: 121 NDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGPLPDKLQEALLP 180

Query: 623 TVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHC-LVNGQYAVHGVTSFVS 799
            VDY  CS   +WG TVK +MVCAGGD  RSGC GDSGGPL+C   +G + VHGVTSFVS
Sbjct: 181 VVDYEHCSQWDWWGITVKKTMVCAGGD-TRSGCNGDSGGPLNCPAADGSWQVHGVTSFVS 239

Query: 800 RLGCNVTRKPPVFTRVSAYIS*INNVVASN 889
             GCN  +KP VFTRVSA+I  I+  +ASN
Sbjct: 240 AFGCNTIKKPTVFTRVSAFIDWIDETIASN 269


>ref|XP_869711.1| PREDICTED: similar to elastase 3B preproprotein isoform 3 [Bos
           taurus]
          Length = 269

 Score =  264 bits (674), Expect = 1e-70
 Identities = 131/253 (51%), Positives = 171/253 (67%), Gaps = 3/253 (1%)
 Frame = +2

Query: 140 TQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRE 319
           +Q F   ++RVV G +A   SW  Q+SLQY    ++ HTCGG+LI  +WV+TA HC+   
Sbjct: 18  SQPFSRPSSRVVNGEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCISTS 77

Query: 320 LTFRVVVGEHNLNQNDGTEQYVGVQK--IVVHPYWNTDDVAAGYDIALLRLAQSVTLNSY 493
            T++VV+GE++ +  +G+EQ + +    + VHP WN++ VA G DIAL++L++S  L   
Sbjct: 78  RTYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDK 137

Query: 494 VQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTV 673
           VQL  LP AG IL N +PCYI+GWG   T G L   LQ+A LP VDY  CS   +WG TV
Sbjct: 138 VQLANLPPAGDILPNEAPCYISGWGRLYTGGPLPDKLQEALLPVVDYEHCSQWDWWGITV 197

Query: 674 KNSMVCAGGDGVRSGCQGDSGGPLHC-LVNGQYAVHGVTSFVSRLGCNVTRKPPVFTRVS 850
           K +MVCAGGD  RSGC GDSGGPL+C   +G + VHGVTSFVS  GCN  +KP VFTRVS
Sbjct: 198 KKTMVCAGGD-TRSGCNGDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVS 256

Query: 851 AYIS*INNVVASN 889
           A+I  I+  +ASN
Sbjct: 257 AFIDWIDETIASN 269


>ref|XP_591837.1| PREDICTED: similar to Caldecrin precursor (Chymotrypsin C) [Bos
           taurus]
          Length = 268

 Score =  261 bits (666), Expect = 1e-69
 Identities = 130/242 (53%), Positives = 165/242 (68%), Gaps = 2/242 (0%)
 Frame = +2

Query: 152 PETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRELTFR 331
           P  +ARVVGG +A  +SWP QISLQY   ++W HTCGGTLI  N V+TAAHC+   LT+R
Sbjct: 24  PNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCISNTLTYR 83

Query: 332 VVVGEHNLN-QNDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGV 508
           V +G++NL  +++    YVGV  I VH  WN+  V    DIAL++LA++V L+  +Q+  
Sbjct: 84  VALGKNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVRN--DIALIKLAETVELSDTIQVAC 141

Query: 509 LPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMV 688
           LP  G++L  + PC++TGWG   TNG +A  LQQ   P VDYA CS   +WG+TVK +MV
Sbjct: 142 LPEEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKETMV 201

Query: 689 CAGGDGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFVSRLGCNVTRKPPVFTRVSAYIS* 865
           CAGGDGV S C GDSGGPL+C   NG + V G+ SF S L CN  +KP VFTRVSAYI  
Sbjct: 202 CAGGDGVISACNGDSGGPLNCQAENGNWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDW 261

Query: 866 IN 871
           IN
Sbjct: 262 IN 263


>ref|XP_608091.2| PREDICTED: similar to Chymotrypsinogen B precursor [Bos taurus]
          Length = 263

 Score =  157 bits (398), Expect = 1e-38
 Identities = 95/243 (39%), Positives = 137/243 (56%), Gaps = 1/243 (0%)
 Frame = +2

Query: 164 ARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRELTFRVVVG 343
           +R+V G EA   SWP Q+SLQ ++G    H CGG+LI +NWV+TAAHC     +  VV G
Sbjct: 32  SRIVNGEEAVPGSWPWQVSLQDKTGF---HFCGGSLINENWVVTAAHC-GVTTSDVVVAG 87

Query: 344 EHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAG 523
           E +   +    Q + + K+  +  +N+  +    DI LL+L+ + + +  V    LP A 
Sbjct: 88  EFDQGSSSEKIQKLKIAKVFKNSKYNS--LTINNDITLLKLSTAASFSQTVSAVCLPSAS 145

Query: 524 TILANNSPCYITGWGLTR-TNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAGG 700
              A  + C  TGWGLTR TN      LQQA LP +    C    YWG+ +K++M+CAG 
Sbjct: 146 DDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNC--KKYWGTKIKDAMICAGA 203

Query: 701 DGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPPVFTRVSAYIS*INNVV 880
            GV S C GDSGGPL C  NG + + G+ S+ S   C+ T  P V+ RV+A ++ +   +
Sbjct: 204 SGV-SSCMGDSGGPLVCKKNGAWTLVGIVSWGSST-CS-TSTPGVYARVTALVNWVQQTL 260

Query: 881 ASN 889
           A+N
Sbjct: 261 AAN 263


>ref|NP_776627.1| tryptase alpha/beta 1 [Bos taurus]
          Length = 271

 Score =  156 bits (394), Expect = 4e-38
 Identities = 103/276 (37%), Positives = 144/276 (52%), Gaps = 13/276 (4%)
 Frame = +2

Query: 92  MLRLLVVASLVLYGHSTQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTL 271
           ML LL +A L+    +        A +VGG EA  + WP Q+SL+  S   W H CGG+L
Sbjct: 1   MLHLLALALLLSLVSAAPGQALQRAGIVGGQEAPGSRWPWQVSLRV-SRRYWRHHCGGSL 59

Query: 272 IRQNWVMTAAHCVDREL----TFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAA 439
           I   WV+TAAHCV  E+     FRV + E +L   D   Q + + +I+ HP  N   V  
Sbjct: 60  IHPQWVLTAAHCVGPEVHGPSYFRVQLREQHLYYQD---QLLPISRIIPHP--NYYSVKN 114

Query: 440 GYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQ--TLQQA 613
           G DIALL L + V ++ +VQL  LP         + C++TGWG      +L     L+Q 
Sbjct: 115 GADIALLELDKLVNISWHVQLVTLPPESETFPPGTQCWVTGWGNVDNGRRLPPPFPLKQV 174

Query: 614 YLPTVDYAICSSSSYWG-------STVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYA 772
            +P V+ ++C    + G       S V+   +CAG  G R  CQGDSGGPL C VNG + 
Sbjct: 175 KVPVVENSVCDRKYHSGLSTGDNVSIVQEDNLCAGDSG-RDSCQGDSGGPLVCKVNGTWL 233

Query: 773 VHGVTSFVSRLGCNVTRKPPVFTRVSAYIS*INNVV 880
             GV S+    GC    +P ++TRV++Y+  I+  V
Sbjct: 234 QAGVVSWGD--GCAKPNRPGIYTRVTSYLDWIHQYV 267


>ref|NP_776376.1| plasminogen [Bos taurus]
          Length = 812

 Score =  154 bits (389), Expect = 1e-37
 Identities = 92/248 (37%), Positives = 135/248 (54%), Gaps = 5/248 (2%)
 Frame = +2

Query: 161  NARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRELT---FR 331
            + R+VGG  ++ +SWP Q+SL+  S     H CGGTLI   WV+TAAHC+D  L    ++
Sbjct: 581  SGRIVGGCVSKPHSWPWQVSLRRSS----RHFCGGTLISPKWVLTAAHCLDNILALSFYK 636

Query: 332  VVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVL 511
            V++G HN    + + Q + V ++   P        +  DIALL+L++   +   V    L
Sbjct: 637  VILGAHNEKVREQSVQEIPVSRLFREP--------SQADIALLKLSRPAIITKEVIPACL 688

Query: 512  PRAGTILANNSPCYITGWGLTRTNGQLAQ-TLQQAYLPTVDYAICSSSSYWGSTVKNSMV 688
            P    ++A  + CYITGWG   T G   +  L++A+LP ++  +C+ + Y    VK + +
Sbjct: 689  PPPNYMVAARTECYITGWG--ETQGTFGEGLLKEAHLPVIENKVCNRNEYLDGRVKPTEL 746

Query: 689  CAGG-DGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPPVFTRVSAYIS* 865
            CAG   G    CQGDSGGPL C    +Y + GVTS+   LGC    KP V+ RVS Y+  
Sbjct: 747  CAGHLIGGTDSCQGDSGGPLVCFEKDKYILQGVTSW--GLGCARPNKPGVYVRVSPYVPW 804

Query: 866  INNVVASN 889
            I   +  N
Sbjct: 805  IEETMRRN 812


>ref|XP_584887.2| PREDICTED: similar to Serine protease hepsin (Transmembrane
           protease, serine 1) isoform 2 [Bos taurus]
          Length = 417

 Score =  145 bits (367), Expect = 5e-35
 Identities = 89/260 (34%), Positives = 142/260 (54%), Gaps = 13/260 (5%)
 Frame = +2

Query: 167 RVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCV---DRELT-FRV 334
           R+VGG +     WP Q+SL+Y      AH CGG+++ ++WV+TAAHC    +R L+ +RV
Sbjct: 162 RIVGGQDTSLGRWPWQVSLRYDG----AHLCGGSVLSRDWVLTAAHCFPERNRVLSRWRV 217

Query: 335 VVGEHNLNQNDGTEQYVGVQKIVVH----PYWNTDDVAAGYDIALLRLAQSVTLNSYVQL 502
             G        G +  +GVQ ++ H    P+ + +      DIAL+ L+ ++ L  Y+Q 
Sbjct: 218 FAGAVAQTSPHGVQ--LGVQAVIYHGGYLPFRDPNSEENSNDIALVHLSGTLPLTEYIQP 275

Query: 503 GVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNS 682
             LP AG  L +   C +TGWG T+  GQ A  LQ+A +P +   +C+   ++G+ +K  
Sbjct: 276 VCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGPDFYGNQIKPK 335

Query: 683 MVCAG-GDGVRSGCQGDSGGPLHC----LVNGQYAVHGVTSFVSRLGCNVTRKPPVFTRV 847
           M CAG  +G    CQGDSGGP  C        ++ + G+ S+ +  GC + +KP V+T+V
Sbjct: 336 MFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGT--GCALAQKPGVYTKV 393

Query: 848 SAYIS*INNVVASN*TFSGV 907
           S +   I   + ++   SG+
Sbjct: 394 SDFREWIFQAIKTHSEASGM 413


>ref|XP_607560.2| PREDICTED: similar to Transmembrane protease, serine 13 (Mosaic
            serine protease) (Membrane-type mosaic serine protease)
            [Bos taurus]
          Length = 683

 Score =  145 bits (367), Expect = 5e-35
 Identities = 88/235 (37%), Positives = 137/235 (58%), Gaps = 7/235 (2%)
 Frame = +2

Query: 167  RVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHC--VDRELT---FR 331
            R+VGG  A  + WP Q+SLQ+    S  H CGGTLI   W++TAAHC  + RE     ++
Sbjct: 396  RIVGGARAPESKWPWQVSLQF----SRTHICGGTLIDAQWILTAAHCFFITREKILEGWK 451

Query: 332  VVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVL 511
            V VG ++L+      +   V +I+++  ++ D     YDIAL+RL++ +TL+++V    L
Sbjct: 452  VYVGTNDLHH---LPESASVAQIIINSNYSDDQ--DDYDIALMRLSKPLTLSAHVHPACL 506

Query: 512  PRAGTILANNSPCYITGWGLTR-TNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMV 688
            P  G     N  C+ITG+G T+ T+ + +  L++  +  +D+  C+    + S +   M+
Sbjct: 507  PMHGQTFGLNEICWITGFGKTKETDERTSPFLREVQVNLIDFKKCNDYLVYDSYLTPRMM 566

Query: 689  CAGG-DGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPPVFTRVS 850
            CAG   G R  CQGDSGGPL C  NG++ + GVTS+ +  GC    KP V+T+V+
Sbjct: 567  CAGDLRGGRDSCQGDSGGPLVCEQNGRWYLAGVTSWGT--GCGQRNKPGVYTKVT 619


  Database: RefSeqBP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 16,112,626
  Number of sequences in database:  33,508
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,388,854
Number of Sequences: 33508
Number of extensions: 1294728
Number of successful extensions: 6212
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 4335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5745
length of database: 16,112,626
effective HSP length: 104
effective length of database: 12,627,794
effective search space used: 3750454818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqHP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-030411
         (1207 letters)

Database: RefSeqHP 
           39,411 sequences; 17,774,539 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001962.3| elastase 1, pancreatic [Homo sapiens]                473   e-133
Alignment   gi|NP_254275.1| elastase 2A preproprotein [Homo sapiens]             302   3e-82
Alignment   gi|NP_056933.2| elastase 2B preproprotein [Homo sapiens]             286   3e-77
Alignment   gi|NP_005738.3| elastase 3A, pancreatic preproprotein [Homo sap...   275   6e-74
Alignment   gi|NP_031378.1| elastase 3B preproprotein [Homo sapiens]             270   2e-72
Alignment   gi|NP_009203.2| chymotrypsin C preproprotein [Homo sapiens]          256   3e-68
Alignment   gi|NP_001898.1| chymotrypsin-like [Homo sapiens]                     163   3e-40
Alignment   gi|NP_003285.2| tryptase alpha/beta 1 precursor [Homo sapiens]       159   3e-39
Alignment   gi|NP_077078.5| tryptase beta 2 precursor [Homo sapiens]             159   4e-39
Alignment   gi|NP_000292.1| plasminogen [Homo sapiens]                           152   5e-37

>ref|NP_001962.3| elastase 1, pancreatic [Homo sapiens]
          Length = 258

 Score =  473 bits (1218), Expect = e-133
 Identities = 227/257 (88%), Positives = 241/257 (93%)
 Frame = +2

Query: 119 LVLYGHSTQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTA 298
           LVLYGHSTQD PETNARVVGGTEA RNSWPSQISLQYRSG S  HTCGGTLIRQNWVMTA
Sbjct: 2   LVLYGHSTQDLPETNARVVGGTEAGRNSWPSQISLQYRSGGSRYHTCGGTLIRQNWVMTA 61

Query: 299 AHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSV 478
           AHCVD + TFRVV G+HNL+QNDGTEQYV VQKIVVHPYWN+D+VAAGYDIALLRLAQSV
Sbjct: 62  AHCVDYQKTFRVVAGDHNLSQNDGTEQYVSVQKIVVHPYWNSDNVAAGYDIALLRLAQSV 121

Query: 479 TLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSY 658
           TLNSYVQLGVLP+ G ILANNSPCYITGWG T+TNGQLAQTLQQAYLP+VDYAICSSSSY
Sbjct: 122 TLNSYVQLGVLPQEGAILANNSPCYITGWGKTKTNGQLAQTLQQAYLPSVDYAICSSSSY 181

Query: 659 WGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPPVF 838
           WGSTVKN+MVCAGGDGVRSGCQGDSGGPLHCLVNG+Y+VHGVTSFVS  GCNV+RKP VF
Sbjct: 182 WGSTVKNTMVCAGGDGVRSGCQGDSGGPLHCLVNGKYSVHGVTSFVSSRGCNVSRKPTVF 241

Query: 839 TRVSAYIS*INNVVASN 889
           T+VSAYIS INNV+ASN
Sbjct: 242 TQVSAYISWINNVIASN 258


>ref|NP_254275.1| elastase 2A preproprotein [Homo sapiens]
          Length = 269

 Score =  302 bits (774), Expect = 3e-82
 Identities = 150/269 (55%), Positives = 187/269 (69%), Gaps = 3/269 (1%)
 Frame = +2

Query: 92  MLRLLVVASLVLYGHSTQD--FPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGG 265
           M+R L++++LV    S  D  +P    RVVGG EA+ NSWP Q+SLQY S   W HTCGG
Sbjct: 1   MIRTLLLSTLVAGALSCGDPTYPPYVTRVVGGEEARPNSWPWQVSLQYSSNGKWYHTCGG 60

Query: 266 TLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGY 445
           +LI  +WV+TAAHC+    T+RV +G HNL   +     V V KIVVH  WN++ ++ G 
Sbjct: 61  SLIANSWVLTAAHCISSSRTYRVGLGRHNLYVAESGSLAVSVSKIVVHKDWNSNQISKGN 120

Query: 446 DIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPT 625
           DIALL+LA  V+L   +QL  LP AGTIL NN PCY+TGWG  +TNG +   LQQ  L  
Sbjct: 121 DIALLKLANPVSLTDKIQLACLPPAGTILPNNYPCYVTGWGRLQTNGAVPDVLQQGRLLV 180

Query: 626 VDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFVSR 802
           VDYA CSSS++WGS+VK SM+CAGGDGV S C GDSGGPL+C   +G++ VHG+ SF SR
Sbjct: 181 VDYATCSSSAWWGSSVKTSMICAGGDGVISSCNGDSGGPLNCQASDGRWQVHGIVSFGSR 240

Query: 803 LGCNVTRKPPVFTRVSAYIS*INNVVASN 889
           LGCN   KP VFTRVS YI  IN+V+A+N
Sbjct: 241 LGCNYYHKPSVFTRVSNYIDWINSVIANN 269


>ref|NP_056933.2| elastase 2B preproprotein [Homo sapiens]
          Length = 269

 Score =  286 bits (731), Expect = 3e-77
 Identities = 142/269 (52%), Positives = 182/269 (67%), Gaps = 3/269 (1%)
 Frame = +2

Query: 92  MLRLLVVASLVLYGHS--TQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGG 265
           M+R L++++LV    S     +    +R++GG EA+ NSWP Q+SLQY S   W HTCGG
Sbjct: 1   MIRTLLLSTLVAGALSCGVSTYAPDMSRMLGGEEARPNSWPWQVSLQYSSNGQWYHTCGG 60

Query: 266 TLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGY 445
           +LI  +WV+TAAHC+     +RV++G+HNL   +     V V KIVVH  WN+D V+ G 
Sbjct: 61  SLIANSWVLTAAHCISSSGIYRVMLGQHNLYVAESGSLAVSVSKIVVHKDWNSDQVSKGN 120

Query: 446 DIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPT 625
           DIALL+LA  V+L   +QL  LP AGTIL NN PCY+TGWG  +TNG L   L+Q  L  
Sbjct: 121 DIALLKLANPVSLTDKIQLACLPPAGTILPNNYPCYVTGWGRLQTNGALPDDLKQGRLLV 180

Query: 626 VDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFVSR 802
           VDYA CSSS +WGSTVK +M+CAGGDGV   C GDSGGPL+C   +G++ VHG+ S  S 
Sbjct: 181 VDYATCSSSGWWGSTVKTNMICAGGDGVICTCNGDSGGPLNCQASDGRWEVHGIGSLTSV 240

Query: 803 LGCNVTRKPPVFTRVSAYIS*INNVVASN 889
           LGCN   KP +FTRVS Y   IN+V+A+N
Sbjct: 241 LGCNYYYKPSIFTRVSNYNDWINSVIANN 269


>ref|NP_005738.3| elastase 3A, pancreatic preproprotein [Homo sapiens]
          Length = 270

 Score =  275 bits (703), Expect = 6e-74
 Identities = 146/272 (53%), Positives = 186/272 (68%), Gaps = 6/272 (2%)
 Frame = +2

Query: 92  MLRLLVVASLVLYGHSTQDFP---ETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCG 262
           MLRLL  +SL+L   ++   P    +++RVV G +A   SWP Q+SLQY    S+ HTCG
Sbjct: 2   MLRLL--SSLLLVAVASGYGPPSSHSSSRVVHGEDAVPYSWPWQVSLQYEKSGSFYHTCG 59

Query: 263 GTLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGV--QKIVVHPYWNTDDVA 436
           G+LI  +WV+TA HC+ R+LT++VV+GE+NL   +G EQ + +  +++ VHP WN   VA
Sbjct: 60  GSLIAPDWVVTAGHCISRDLTYQVVLGEYNLAVKEGPEQVIPINSEELFVHPLWNRSCVA 119

Query: 437 AGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAY 616
            G DIAL++L++S  L   VQL  LP AG IL N +PCYITGWG   TNG L   LQQA 
Sbjct: 120 CGNDIALIKLSRSAQLGDAVQLASLPPAGDILPNKTPCYITGWGRLYTNGPLPDKLQQAR 179

Query: 617 LPTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHC-LVNGQYAVHGVTSF 793
           LP VDY  CS  ++WGSTVK +MVCAGG  +RSGC GDSGGPL+C   +G + VHGVTSF
Sbjct: 180 LPVVDYKHCSRWNWWGSTVKKTMVCAGG-YIRSGCNGDSGGPLNCPTEDGGWQVHGVTSF 238

Query: 794 VSRLGCNVTRKPPVFTRVSAYIS*INNVVASN 889
           VS  GCN   KP VFTRVSA+I  I   +AS+
Sbjct: 239 VSGFGCNFIWKPTVFTRVSAFIDWIEETIASH 270


>ref|NP_031378.1| elastase 3B preproprotein [Homo sapiens]
          Length = 270

 Score =  270 bits (689), Expect = 2e-72
 Identities = 142/272 (52%), Positives = 182/272 (66%), Gaps = 6/272 (2%)
 Frame = +2

Query: 92  MLRLLVVASLVLYGHSTQDFPETN---ARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCG 262
           MLRLL  +SL+L   ++   P ++   +RVV G +A   SWP Q+SLQY    S+ HTCG
Sbjct: 2   MLRLL--SSLLLVAVASGYGPPSSRPSSRVVNGEDAVPYSWPWQVSLQYEKSGSFYHTCG 59

Query: 263 GTLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQK--IVVHPYWNTDDVA 436
           G+LI  +WV+TA HC+    T++VV+GE++    +G EQ + +    + VHP WN   VA
Sbjct: 60  GSLIAPDWVVTAGHCISSSRTYQVVLGEYDRAVKEGPEQVIPINSGDLFVHPLWNRSCVA 119

Query: 437 AGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAY 616
            G DIAL++L++S  L   VQL  LP AG IL N +PCYITGWG   TNG L   LQ+A 
Sbjct: 120 CGNDIALIKLSRSAQLGDAVQLASLPPAGDILPNETPCYITGWGRLYTNGPLPDKLQEAL 179

Query: 617 LPTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHC-LVNGQYAVHGVTSF 793
           LP VDY  CS  ++WGS+VK +MVCAGGD +RSGC GDSGGPL+C   +G + VHGVTSF
Sbjct: 180 LPVVDYEHCSRWNWWGSSVKKTMVCAGGD-IRSGCNGDSGGPLNCPTEDGGWQVHGVTSF 238

Query: 794 VSRLGCNVTRKPPVFTRVSAYIS*INNVVASN 889
           VS  GCN  RKP VFTRVSA+I  I   +AS+
Sbjct: 239 VSAFGCNTRRKPTVFTRVSAFIDWIEETIASH 270


>ref|NP_009203.2| chymotrypsin C preproprotein [Homo sapiens]
          Length = 268

 Score =  256 bits (654), Expect = 3e-68
 Identities = 135/265 (50%), Positives = 171/265 (64%), Gaps = 5/265 (1%)
 Frame = +2

Query: 92  MLRLLVVASLVLYGHS--TQDFPET-NARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCG 262
           ML + V+A+L+    S     FP   +ARVVGG +A+ +SWP QISLQY    +W HTCG
Sbjct: 1   MLGITVLAALLACASSCGVPSFPPNLSARVVGGEDARPHSWPWQISLQYLKNDTWRHTCG 60

Query: 263 GTLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQ-YVGVQKIVVHPYWNTDDVAA 439
           GTLI  N+V+TAAHC+    T+RV VG++NL   D     +VGV  I VH  WN   +  
Sbjct: 61  GTLIASNFVLTAAHCISNTRTYRVAVGKNNLEVEDEEGSLFVGVDTIHVHKRWNA--LLL 118

Query: 440 GYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYL 619
             DIAL++LA+ V L+  +Q+  LP   ++L  + PCY+TGWG   TNG +A  LQQ   
Sbjct: 119 RNDIALIKLAEHVELSDTIQVACLPEKDSLLPKDYPCYVTGWGRLWTNGPIADKLQQGLQ 178

Query: 620 PTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHC-LVNGQYAVHGVTSFV 796
           P VD+A CS   +WG  VK +MVCAGGDGV S C GDSGGPL+C L NG + V G+ SF 
Sbjct: 179 PVVDHATCSRIDWWGFRVKKTMVCAGGDGVISACNGDSGGPLNCQLENGSWEVFGIVSFG 238

Query: 797 SRLGCNVTRKPPVFTRVSAYIS*IN 871
           SR GCN  +KP V+TRVSAYI  IN
Sbjct: 239 SRRGCNTRKKPVVYTRVSAYIDWIN 263


>ref|NP_001898.1| chymotrypsin-like [Homo sapiens]
          Length = 264

 Score =  163 bits (412), Expect = 3e-40
 Identities = 106/274 (38%), Positives = 142/274 (51%), Gaps = 8/274 (2%)
 Frame = +2

Query: 92  MLRLLVVASLVLYGHS-------TQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWA 250
           ML L +  SLVL G S        +     + R+V G  A   SWP Q+SLQ  SG    
Sbjct: 1   MLLLSLTLSLVLLGSSWGCGIPAIKPALSFSQRIVNGENAVLGSWPWQVSLQDSSGF--- 57

Query: 251 HTCGGTLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDD 430
           H CGG+LI Q+WV+TAAHC        VV+GE++ + N    Q + V + + HP WN+  
Sbjct: 58  HFCGGSLISQSWVVTAAHCNVSPGRHFVVLGEYDRSSNAEPLQVLSVSRAITHPSWNS-- 115

Query: 431 VAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQT-LQ 607
                D+ LL+LA      + +    L  +   L     C  TGWG     G +    LQ
Sbjct: 116 TTMNNDVTLLKLASPAQYTTRISPVCLASSNEALTEGLTCVTTGWGRLSGVGNVTPAHLQ 175

Query: 608 QAYLPTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVT 787
           Q  LP V    C    YWGS++ +SM+CAGG G  S CQGDSGGPL C     + + G+ 
Sbjct: 176 QVALPLVTVNQC--RQYWGSSITDSMICAGGAGA-SSCQGDSGGPLVCQKGNTWVLIGIV 232

Query: 788 SFVSRLGCNVTRKPPVFTRVSAYIS*INNVVASN 889
           S+ ++  CNV R P V+TRVS + + IN V+A N
Sbjct: 233 SWGTK-NCNV-RAPAVYTRVSKFSTWINQVIAYN 264


>ref|NP_003285.2| tryptase alpha/beta 1 precursor [Homo sapiens]
          Length = 275

 Score =  159 bits (403), Expect = 3e-39
 Identities = 104/280 (37%), Positives = 148/280 (52%), Gaps = 17/280 (6%)
 Frame = +2

Query: 92  MLRLLVVASLVL----YGHSTQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTC 259
           ML LL++A  VL    Y             +VGG EA R+ WP Q+SL+   G  W H C
Sbjct: 1   MLNLLLLALPVLASRAYAAPAPGQALQRVGIVGGQEAPRSKWPWQVSLRVH-GPYWMHFC 59

Query: 260 GGTLIRQNWVMTAAHCVDREL----TFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTD 427
           GG+LI   WV+TAAHCV  ++      RV + E +L   D   Q + V +I+VHP + T 
Sbjct: 60  GGSLIHPQWVLTAAHCVGPDVKDLAALRVQLREQHLYYQD---QLLPVSRIIVHPQFYTA 116

Query: 428 DVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQ--T 601
            +  G DIALL L + V ++S+V    LP A        PC++TGWG    + +L     
Sbjct: 117 QI--GADIALLELEEPVNVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERLPPPFP 174

Query: 602 LQQAYLPTVDYAICSSSSYWGS-------TVKNSMVCAGGDGVRSGCQGDSGGPLHCLVN 760
           L+Q  +P ++  IC +  + G+        V++ M+CAG    R  CQGDSGGPL C VN
Sbjct: 175 LKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAGNTR-RDSCQGDSGGPLVCKVN 233

Query: 761 GQYAVHGVTSFVSRLGCNVTRKPPVFTRVSAYIS*INNVV 880
           G +   GV S+    GC    +P ++TRV+ Y+  I++ V
Sbjct: 234 GTWLQAGVVSWGE--GCAQPNRPGIYTRVTYYLDWIHHYV 271


>ref|NP_077078.5| tryptase beta 2 precursor [Homo sapiens]
          Length = 275

 Score =  159 bits (402), Expect = 4e-39
 Identities = 104/280 (37%), Positives = 148/280 (52%), Gaps = 17/280 (6%)
 Frame = +2

Query: 92  MLRLLVVASLVL----YGHSTQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTC 259
           ML LL++A  VL    Y             +VGG EA R+ WP Q+SL+ R    W H C
Sbjct: 1   MLNLLLLALPVLASRAYAAPAPGQALQRVGIVGGQEAPRSKWPWQVSLRVRD-RYWMHFC 59

Query: 260 GGTLIRQNWVMTAAHCVDREL----TFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTD 427
           GG+LI   WV+TAAHCV  ++      RV + E +L   D   Q + V +I+VHP + T 
Sbjct: 60  GGSLIHPQWVLTAAHCVGPDVKDLAALRVQLREQHLYYQD---QLLPVSRIIVHPQFYTA 116

Query: 428 DVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQ--T 601
            + A  DIALL L + V ++S+V    LP A        PC++TGWG    + +L     
Sbjct: 117 QIGA--DIALLELEEPVNVSSHVHTVTLPPASETFPPGMPCWVTGWGDVDNDERLPPPFP 174

Query: 602 LQQAYLPTVDYAICSSSSYWGS-------TVKNSMVCAGGDGVRSGCQGDSGGPLHCLVN 760
           L+Q  +P ++  IC +  + G+        V++ M+CAG    R  CQGDSGGPL C VN
Sbjct: 175 LKQVKVPIMENHICDAKYHLGAYTGDDVRIVRDDMLCAGNTR-RDSCQGDSGGPLVCKVN 233

Query: 761 GQYAVHGVTSFVSRLGCNVTRKPPVFTRVSAYIS*INNVV 880
           G +   GV S+    GC    +P ++TRV+ Y+  I++ V
Sbjct: 234 GTWLQAGVVSWGE--GCAQPNRPGIYTRVTYYLDWIHHYV 271


>ref|NP_000292.1| plasminogen [Homo sapiens]
          Length = 810

 Score =  152 bits (384), Expect = 5e-37
 Identities = 92/246 (37%), Positives = 137/246 (55%), Gaps = 5/246 (2%)
 Frame = +2

Query: 167  RVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVD---RELTFRVV 337
            RVVGG  A  +SWP Q+SL+ R G    H CGGTLI   WV+TAAHC++   R  +++V+
Sbjct: 580  RVVGGCVAHPHSWPWQVSLRTRFGM---HFCGGTLISPEWVLTAAHCLEKSPRPSSYKVI 636

Query: 338  VGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPR 517
            +G H     +   Q + V ++ + P           DIALL+L+    +   V    LP 
Sbjct: 637  LGAHQEVNLEPHVQEIEVSRLFLEP--------TRKDIALLKLSSPAVITDKVIPACLPS 688

Query: 518  AGTILANNSPCYITGWGLTR-TNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCA 694
               ++A+ + C+ITGWG T+ T G  A  L++A LP ++  +C+   +    V+++ +CA
Sbjct: 689  PNYVVADRTECFITGWGETQGTFG--AGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCA 746

Query: 695  GG-DGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPPVFTRVSAYIS*IN 871
            G   G    CQGDSGGPL C    +Y + GVTS+   LGC    KP V+ RVS +++ I 
Sbjct: 747  GHLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSW--GLGCARPNKPGVYVRVSRFVTWIE 804

Query: 872  NVVASN 889
             V+ +N
Sbjct: 805  GVMRNN 810


  Database: RefSeqHP
    Posted date:  Aug 2, 2006 12:57 AM
  Number of letters in database: 17,774,539
  Number of sequences in database:  39,411
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,745,643
Number of Sequences: 39411
Number of extensions: 1555794
Number of successful extensions: 8485
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 5248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7796
length of database: 17,774,539
effective HSP length: 104
effective length of database: 13,675,795
effective search space used: 4061711115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqCP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-030411
         (1207 letters)

Database: RefSeqCP 
           33,732 sequences; 19,266,565 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001003007.1| elastase 1, pancreatic [Canis familiaris]         471   e-133
Alignment   gi|XP_865199.1| PREDICTED: similar to Caldecrin precursor (Chym...   267   2e-71
Alignment   gi|XP_535370.1| PREDICTED: similar to Elastase-3B precursor (El...   265   5e-71
Alignment   gi|XP_866682.1| PREDICTED: similar to elastase 3B, pancreatic i...   263   3e-70
Alignment   gi|XP_865239.1| PREDICTED: similar to Caldecrin precursor (Chym...   259   3e-69
Alignment   gi|XP_852179.1| PREDICTED: similar to Caldecrin precursor (Chym...   259   3e-69
Alignment   gi|XP_535395.2| PREDICTED: similar to Caldecrin precursor (Chym...   256   4e-68
Alignment   gi|XP_850699.1| PREDICTED: similar to Acrosin precursor [Canis ...   162   6e-40
Alignment   gi|XP_533468.2| PREDICTED: similar to Plasminogen precursor [Ca...   161   1e-39
Alignment   gi|XP_852957.1| PREDICTED: similar to Chymotrypsinogen B precur...   157   2e-38

>ref|NP_001003007.1| elastase 1, pancreatic [Canis familiaris]
          Length = 258

 Score =  471 bits (1212), Expect = e-133
 Identities = 223/257 (86%), Positives = 237/257 (92%)
 Frame = +2

Query: 119 LVLYGHSTQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTA 298
           LVLYGHSTQD PETNARVVGGTEA+RNSWPSQISLQY SG  W HTCGGTLIRQNWVMTA
Sbjct: 2   LVLYGHSTQDVPETNARVVGGTEARRNSWPSQISLQYLSGGKWYHTCGGTLIRQNWVMTA 61

Query: 299 AHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSV 478
           AHCVDR +TFRVV+GEHNL+QNDGTEQ   VQKIVVHPYWN++DV+AGYDIALLRLAQ V
Sbjct: 62  AHCVDRTMTFRVVIGEHNLSQNDGTEQSASVQKIVVHPYWNSNDVSAGYDIALLRLAQKV 121

Query: 479 TLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSY 658
           TLNSYVQLGVLP+ G ILANNSPCYITGWGLT+TNGQLAQ LQQAYLPTVDYAICSSSSY
Sbjct: 122 TLNSYVQLGVLPQEGAILANNSPCYITGWGLTKTNGQLAQVLQQAYLPTVDYAICSSSSY 181

Query: 659 WGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPPVF 838
           WGS VK SMVCAGGDG+RSGCQGDSGGPLHC VNG+Y VHGVTSFVS LGCNV+RKP VF
Sbjct: 182 WGSIVKKSMVCAGGDGIRSGCQGDSGGPLHCSVNGKYTVHGVTSFVSSLGCNVSRKPTVF 241

Query: 839 TRVSAYIS*INNVVASN 889
           TRVSAYI+ INNV+ASN
Sbjct: 242 TRVSAYITWINNVIASN 258


>ref|XP_865199.1| PREDICTED: similar to Caldecrin precursor (Chymotrypsin C) isoform
           3 [Canis familiaris]
          Length = 270

 Score =  267 bits (682), Expect = 2e-71
 Identities = 136/265 (51%), Positives = 176/265 (66%), Gaps = 5/265 (1%)
 Frame = +2

Query: 92  MLRLLVVASLVLYGHS--TQDF-PETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCG 262
           ML + V+A+L+ Y  S     F P  +ARVVGG  A+ +SWP QISLQY     W HTCG
Sbjct: 1   MLGVTVLAALLAYASSCGVPTFQPNLSARVVGGDNARPHSWPWQISLQYLKNGVWRHTCG 60

Query: 263 GTLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQ-YVGVQKIVVHPYWNTDDVAA 439
           GTLI  N+V+TAAHC+   LT+RV +G++NL   D     +  V+ IVVH  WN+  V  
Sbjct: 61  GTLIANNYVLTAAHCISDTLTYRVALGKNNLVVEDEEGSVFANVESIVVHEKWNSFLVCL 120

Query: 440 GYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYL 619
           G DIAL++LA+ V L+  +++  LP AG++L  + PCY+TGWG   TNG +A  LQQ   
Sbjct: 121 GNDIALIKLAEPVQLSDTIKVACLPEAGSLLPQDYPCYVTGWGRLWTNGPIADELQQGLQ 180

Query: 620 PTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFV 796
           P VD+A C+   +WG+ VK++MVCAGGDG+ S C GDSGGPL+C   NG + V G+ SF 
Sbjct: 181 PIVDHATCTQRDWWGTMVKDTMVCAGGDGIISSCNGDSGGPLNCQAENGTWEVRGIVSFG 240

Query: 797 SRLGCNVTRKPPVFTRVSAYIS*IN 871
           S LGCN  +KP VFTRVSAYI  IN
Sbjct: 241 SGLGCNTLKKPTVFTRVSAYIDWIN 265


>ref|XP_535370.1| PREDICTED: similar to Elastase-3B precursor (Elastase IIIB)
           (Protease E) isoform 1 [Canis familiaris]
          Length = 269

 Score =  265 bits (678), Expect = 5e-71
 Identities = 137/270 (50%), Positives = 178/270 (65%), Gaps = 4/270 (1%)
 Frame = +2

Query: 92  MLRLLVVASLV-LYGHSTQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGT 268
           MLRLL     V L     +   + ++RVV G +A   SWP Q+SLQY    ++ HTCGG+
Sbjct: 1   MLRLLTSLLFVALASGCGRPSYQPSSRVVNGEDAVPYSWPWQVSLQYEKNGAFHHTCGGS 60

Query: 269 LIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQK--IVVHPYWNTDDVAAG 442
           LI  +WVMTA HC+   LT++VV+GE+N  + +G+EQ + +    + VHP WN++ VA G
Sbjct: 61  LIAPDWVMTAGHCISSSLTYQVVLGEYNRAEEEGSEQVIPINAGDLFVHPLWNSNCVACG 120

Query: 443 YDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLP 622
            DIAL++L++S  L   VQL  LP AG IL N +PCYI+GWG   T G L   LQQA LP
Sbjct: 121 NDIALIKLSRSAQLGDAVQLACLPPAGEILPNGAPCYISGWGRLYTGGPLPDKLQQALLP 180

Query: 623 TVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFVS 799
            VDY  CS   +WG +VK +MVCAGGD + SGC GDSGGPL+C   +G + VHGVTSFVS
Sbjct: 181 VVDYEHCSKLDWWGISVKKTMVCAGGD-ILSGCNGDSGGPLNCPTGDGSWQVHGVTSFVS 239

Query: 800 RLGCNVTRKPPVFTRVSAYIS*INNVVASN 889
             GCN  +KP VFTRVSA+   I  V++S+
Sbjct: 240 AFGCNTIKKPTVFTRVSAFNDWIEEVMSSH 269


>ref|XP_866682.1| PREDICTED: similar to elastase 3B, pancreatic isoform 2 [Canis
           familiaris]
          Length = 280

 Score =  263 bits (671), Expect = 3e-70
 Identities = 136/266 (51%), Positives = 174/266 (65%), Gaps = 4/266 (1%)
 Frame = +2

Query: 92  MLRLLVVASLV-LYGHSTQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGT 268
           MLRLL     V L     +   + ++RVV G +A   SWP Q+SLQY    ++ HTCGG+
Sbjct: 1   MLRLLTSLLFVALASGCGRPSYQPSSRVVNGEDAVPYSWPWQVSLQYEKNGAFHHTCGGS 60

Query: 269 LIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQK--IVVHPYWNTDDVAAG 442
           LI  +WVMTA HC+   LT++VV+GE+N  + +G+EQ + +    + VHP WN++ VA G
Sbjct: 61  LIAPDWVMTAGHCISSSLTYQVVLGEYNRAEEEGSEQVIPINAGDLFVHPLWNSNCVACG 120

Query: 443 YDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLP 622
            DIAL++L++S  L   VQL  LP AG IL N +PCYI+GWG   T G L   LQQA LP
Sbjct: 121 NDIALIKLSRSAQLGDAVQLACLPPAGEILPNGAPCYISGWGRLYTGGPLPDKLQQALLP 180

Query: 623 TVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFVS 799
            VDY  CS   +WG +VK +MVCAGGD + SGC GDSGGPL+C   +G + VHGVTSFVS
Sbjct: 181 VVDYEHCSKLDWWGISVKKTMVCAGGD-ILSGCNGDSGGPLNCPTGDGSWQVHGVTSFVS 239

Query: 800 RLGCNVTRKPPVFTRVSAYIS*INNV 877
             GCN  +KP VFTRVSA+   I  V
Sbjct: 240 AFGCNTIKKPTVFTRVSAFNDWIEEV 265


>ref|XP_865239.1| PREDICTED: similar to Caldecrin precursor (Chymotrypsin C) isoform
           4 [Canis familiaris]
          Length = 268

 Score =  259 bits (663), Expect = 3e-69
 Identities = 135/265 (50%), Positives = 175/265 (66%), Gaps = 5/265 (1%)
 Frame = +2

Query: 92  MLRLLVVASLVLYGHS--TQDF-PETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCG 262
           ML + V+A+L+ Y  S     F P  +ARVVGG  A+ +SWP QISLQY     W HTCG
Sbjct: 1   MLGVTVLAALLAYASSCGVPTFQPNLSARVVGGDNARPHSWPWQISLQYLKNGVWRHTCG 60

Query: 263 GTLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQ-YVGVQKIVVHPYWNTDDVAA 439
           GTLI  N+V+TAAHC+   LT+RV +G++NL   D     +  V+ IVVH  WN+  V  
Sbjct: 61  GTLIANNYVLTAAHCISDTLTYRVALGKNNLVVEDEEGSVFANVESIVVHEKWNSFLVRN 120

Query: 440 GYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYL 619
             DIAL++LA+ V L+  +++  LP AG++L  + PCY+TGWG   TNG +A  LQQ   
Sbjct: 121 --DIALIKLAEPVQLSDTIKVACLPEAGSLLPQDYPCYVTGWGRLWTNGPIADELQQGLQ 178

Query: 620 PTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFV 796
           P VD+A C+   +WG+ VK++MVCAGGDG+ S C GDSGGPL+C   NG + V G+ SF 
Sbjct: 179 PIVDHATCTQRDWWGTMVKDTMVCAGGDGIISSCNGDSGGPLNCQAENGTWEVRGIVSFG 238

Query: 797 SRLGCNVTRKPPVFTRVSAYIS*IN 871
           S LGCN  +KP VFTRVSAYI  IN
Sbjct: 239 SGLGCNTLKKPTVFTRVSAYIDWIN 263


>ref|XP_852179.1| PREDICTED: similar to Caldecrin precursor (Chymotrypsin C) isoform
           2 [Canis familiaris]
          Length = 268

 Score =  259 bits (663), Expect = 3e-69
 Identities = 135/265 (50%), Positives = 175/265 (66%), Gaps = 5/265 (1%)
 Frame = +2

Query: 92  MLRLLVVASLVLYGHS--TQDF-PETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCG 262
           ML + V+A+L+ Y  S     F P  +ARVVGG  A+ +SWP QISLQY     W HTCG
Sbjct: 1   MLGVTVLAALLAYASSCGVPTFQPNLSARVVGGDNARPHSWPWQISLQYLKNGVWRHTCG 60

Query: 263 GTLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQ-YVGVQKIVVHPYWNTDDVAA 439
           GTLI  N+V+TAAHC+   LT+RV +G++NL   D     +  V+ IVVH  WN+  V  
Sbjct: 61  GTLIANNYVLTAAHCISDTLTYRVALGKNNLVVEDEEGSVFANVESIVVHEKWNSFLVRN 120

Query: 440 GYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYL 619
             DIAL++LA+ V L+  +++  LP AG++L  + PCY+TGWG   TNG +A  LQQ   
Sbjct: 121 --DIALIKLAEPVQLSDTIKVACLPEAGSLLPQDYPCYVTGWGRLWTNGPIADELQQGLQ 178

Query: 620 PTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFV 796
           P VD+A C+   +WG+ VK++MVCAGGDG+ S C GDSGGPL+C   NG + V G+ SF 
Sbjct: 179 PIVDHATCTQRDWWGTMVKDTMVCAGGDGIISSCNGDSGGPLNCQAENGTWEVRGIVSFG 238

Query: 797 SRLGCNVTRKPPVFTRVSAYIS*IN 871
           S LGCN  +KP VFTRVSAYI  IN
Sbjct: 239 SGLGCNTLKKPTVFTRVSAYIDWIN 263


>ref|XP_535395.2| PREDICTED: similar to Caldecrin precursor (Chymotrypsin C) isoform
           1 [Canis familiaris]
          Length = 297

 Score =  256 bits (653), Expect = 4e-68
 Identities = 127/242 (52%), Positives = 163/242 (67%), Gaps = 2/242 (0%)
 Frame = +2

Query: 152 PETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRELTFR 331
           P  +ARVVGG  A+ +SWP QISLQY     W HTCGGTLI  N+V+TAAHC+   LT+R
Sbjct: 53  PNLSARVVGGDNARPHSWPWQISLQYLKNGVWRHTCGGTLIANNYVLTAAHCISDTLTYR 112

Query: 332 VVVGEHNLNQNDGTEQ-YVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGV 508
           V +G++NL   D     +  V+ IVVH  WN+  V    DIAL++LA+ V L+  +++  
Sbjct: 113 VALGKNNLVVEDEEGSVFANVESIVVHEKWNSFLVRN--DIALIKLAEPVQLSDTIKVAC 170

Query: 509 LPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMV 688
           LP AG++L  + PCY+TGWG   TNG +A  LQQ   P VD+A C+   +WG+ VK++MV
Sbjct: 171 LPEAGSLLPQDYPCYVTGWGRLWTNGPIADELQQGLQPIVDHATCTQRDWWGTMVKDTMV 230

Query: 689 CAGGDGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFVSRLGCNVTRKPPVFTRVSAYIS* 865
           CAGGDG+ S C GDSGGPL+C   NG + V G+ SF S LGCN  +KP VFTRVSAYI  
Sbjct: 231 CAGGDGIISSCNGDSGGPLNCQAENGTWEVRGIVSFGSGLGCNTLKKPTVFTRVSAYIDW 290

Query: 866 IN 871
           IN
Sbjct: 291 IN 292


>ref|XP_850699.1| PREDICTED: similar to Acrosin precursor [Canis familiaris]
          Length = 417

 Score =  162 bits (410), Expect = 6e-40
 Identities = 92/238 (38%), Positives = 133/238 (55%), Gaps = 7/238 (2%)
 Frame = +2

Query: 164 ARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVD---RELTFRV 334
           +R+VGGT AQ  +WP  +SLQ +SG   AH CGG+L++ NWV+TAAHC       L +R 
Sbjct: 145 SRIVGGTAAQIGAWPWVVSLQIQSGRILAHICGGSLVKNNWVLTAAHCTKDTRDPLMWRA 204

Query: 335 VVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLP 514
           V+G +N+N +    + + V+ I++HP +N +      DIAL  L ++V  N Y+Q   LP
Sbjct: 205 VIGTNNINVHHPHSKKIKVKAIIIHPGFNLETFV--NDIALFHLKKAVRYNEYIQPICLP 262

Query: 515 -RAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVC 691
                 L  N+ C+I+GWG T   G +   LQ+A +  +   IC S   +G  + N+  C
Sbjct: 263 FDIFQKLDQNTKCFISGWGRTEEEGNITDVLQEAEVHYISRKICGSEQSYGKFIPNTSFC 322

Query: 692 AGG-DGVRSGCQGDSGGPLHCLV--NGQYAVHGVTSFVSRLGCNVTRKPPVFTRVSAY 856
           AG  DG+   C+GDSGGPL C    + ++ V G+TSF    GC     P V+   S Y
Sbjct: 323 AGAEDGIFDTCRGDSGGPLMCYFPEHKRFFVMGITSF--GYGCGRKNFPGVYCGPSFY 378


>ref|XP_533468.2| PREDICTED: similar to Plasminogen precursor [Canis familiaris]
          Length = 812

 Score =  161 bits (408), Expect = 1e-39
 Identities = 97/246 (39%), Positives = 138/246 (56%), Gaps = 5/246 (2%)
 Frame = +2

Query: 167  RVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRE---LTFRVV 337
            RVVGG  A  +SWP QISL+ R G    H CGGTLI   WV+TAAHC++R     +++V+
Sbjct: 582  RVVGGCVANPHSWPWQISLRTRYGK---HFCGGTLISPEWVLTAAHCLERSSRPASYKVI 638

Query: 338  VGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPR 517
            +G H     +   Q + V K+ + P           DIALL+L+    + S V    LP 
Sbjct: 639  LGAHKEVNLESDVQEIEVYKLFLEP--------TRADIALLKLSSPAVITSKVIPACLPP 690

Query: 518  AGTILANNSPCYITGWGLTR-TNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCA 694
               ++A+ + CYITGWG T+ T G  A  L++A LP ++  +C+   Y    VK++ +CA
Sbjct: 691  PNYVVADRTLCYITGWGETQGTYG--AGLLKEAQLPVIENKVCNRYEYLNGRVKSTELCA 748

Query: 695  GG-DGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPPVFTRVSAYIS*IN 871
            G   G    CQGDSGGPL C    +Y + GVTS+   LGC    KP V+ RVS +++ I 
Sbjct: 749  GNLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSW--GLGCARPNKPGVYVRVSRFVTWIE 806

Query: 872  NVVASN 889
             ++ +N
Sbjct: 807  GIMRNN 812


>ref|XP_852957.1| PREDICTED: similar to Chymotrypsinogen B precursor [Canis
           familiaris]
          Length = 263

 Score =  157 bits (397), Expect = 2e-38
 Identities = 104/274 (37%), Positives = 148/274 (54%), Gaps = 8/274 (2%)
 Frame = +2

Query: 92  MLRLLVVASLVLYGHST-----QDFPETN--ARVVGGTEAQRNSWPSQISLQYRSGSSWA 250
           M  L VV   +L+G S+        P+ +  +R++ G +A  NSWP Q+SLQ  SG    
Sbjct: 1   MAFLWVVLGFLLFGSSSGCGVPAIHPQLSGLSRIINGEDAVPNSWPWQVSLQTSSGF--- 57

Query: 251 HTCGGTLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDD 430
           H CGG+LI Q+WV+TAAHC  R+ +  VV G  + +  +   Q + + ++  HP W  D 
Sbjct: 58  HFCGGSLISQHWVVTAAHCGVRK-SHLVVAGVSDHSSTEEAVQVLPIAEVFEHPLWGQD- 115

Query: 431 VAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTN-GQLAQTLQ 607
               YDIALL+LA    L++      LP A       S C  TGWG TR N  +    LQ
Sbjct: 116 -LGPYDIALLKLAAPALLSATASPVCLPGANASFPAGSLCATTGWGRTRYNSNKTPDKLQ 174

Query: 608 QAYLPTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVT 787
           QA LP +  A C    +WGS + + M+CAG  GV S C GDSGGPL C  +G + + G+ 
Sbjct: 175 QAALPLLSNAEC--KKFWGSKITDVMICAGASGV-SSCMGDSGGPLVCQKDGAWTLVGIV 231

Query: 788 SFVSRLGCNVTRKPPVFTRVSAYIS*INNVVASN 889
           S+ S   CN +  P V+T V+ +I  +  ++ +N
Sbjct: 232 SWGSG-WCNPS-SPGVYTLVTKFIPWVLEILEAN 263


  Database: RefSeqCP
    Posted date:  Aug 1, 2006  9:25 PM
  Number of letters in database: 19,266,565
  Number of sequences in database:  33,732
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,943,555
Number of Sequences: 33732
Number of extensions: 1525855
Number of successful extensions: 7432
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 5040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6991
length of database: 19,266,565
effective HSP length: 105
effective length of database: 15,724,705
effective search space used: 4654512680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqMP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-030411
         (1207 letters)

Database: RefSeqMP 
           45,328 sequences; 21,768,885 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_291090.1| elastase 1, pancreatic [Mus musculus]                468   e-132
Alignment   gi|NP_031945.1| elastase 2 [Mus musculus]                            297   2e-80
Alignment   gi|NP_080695.1| elastase 3B, pancreatic [Mus musculus]               273   2e-73
Alignment   gi|NP_001029047.1| chymotrypsin C (caldecrin) [Mus musculus]         238   9e-63
Alignment   gi|XP_995055.1| PREDICTED: similar to elastase 3B, pancreatic [...   182   5e-46
Alignment   gi|NP_075671.1| chymotrypsin-like [Mus musculus]                     157   2e-38
Alignment   gi|NP_032903.2| plasminogen [Mus musculus]                           155   8e-38
Alignment   gi|NP_082342.1| coagulation factor XI [Mus musculus]                 153   4e-37
Alignment   gi|NP_081496.1| tryptase 5 [Mus musculus]                            148   1e-35
Alignment   gi|NP_034911.2| mast cell protease 6 [Mus musculus]                  148   1e-35

>ref|NP_291090.1| elastase 1, pancreatic [Mus musculus]
          Length = 266

 Score =  468 bits (1203), Expect = e-132
 Identities = 222/266 (83%), Positives = 243/266 (91%)
 Frame = +2

Query: 92  MLRLLVVASLVLYGHSTQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTL 271
           MLR LV ASLV  GHST+D PET+AR+VGG EA+RNSWPSQISLQY+ G SW HTCGGTL
Sbjct: 1   MLRFLVFASLVPCGHSTEDVPETDARMVGGAEARRNSWPSQISLQYQYGGSWHHTCGGTL 60

Query: 272 IRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDI 451
           IR NWVMTAAHCVD  +T+RVVVGEHNL+QNDGTEQYV VQKIV HPYWN ++V AGYDI
Sbjct: 61  IRSNWVMTAAHCVDSPMTYRVVVGEHNLSQNDGTEQYVNVQKIVSHPYWNKNNVVAGYDI 120

Query: 452 ALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVD 631
           ALLRLA+SVTLN+YVQLGVLPR GTILANNSPCYITGWG TRTNG+LAQTLQQAYLP+V 
Sbjct: 121 ALLRLAKSVTLNNYVQLGVLPREGTILANNSPCYITGWGRTRTNGELAQTLQQAYLPSVS 180

Query: 632 YAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGC 811
           Y+ICSSSSYWGS+VKN+MVCAGGDGVRSGCQGDSGGPLHC+VNGQYAVHGVTSFVS +GC
Sbjct: 181 YSICSSSSYWGSSVKNTMVCAGGDGVRSGCQGDSGGPLHCMVNGQYAVHGVTSFVSSMGC 240

Query: 812 NVTRKPPVFTRVSAYIS*INNVVASN 889
           NV RKP VFTRVSAYIS +NNV+ASN
Sbjct: 241 NVARKPTVFTRVSAYISWMNNVIASN 266


>ref|NP_031945.1| elastase 2 [Mus musculus]
          Length = 271

 Score =  297 bits (760), Expect = 2e-80
 Identities = 147/271 (54%), Positives = 186/271 (68%), Gaps = 5/271 (1%)
 Frame = +2

Query: 92  MLRLLVVASLVL----YGHSTQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTC 259
           M+R L++++LV      G+ T +  +  +RVVGG EA  N+WP Q+SLQ  S   W H C
Sbjct: 1   MIRTLLLSALVAGALSCGYPTYEVEDDVSRVVGGQEATPNTWPWQVSLQVLSSGRWRHNC 60

Query: 260 GGTLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAA 439
           GG+L+  NWV+TAAHC+    T+RV++G H+L+        V V K+VVH  WN+ +V  
Sbjct: 61  GGSLVANNWVLTAAHCLSNYQTYRVLLGAHSLSNPGAGSAAVQVSKLVVHQRWNSQNVGN 120

Query: 440 GYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYL 619
           GYDIAL++LA  VTL+  +Q   LP AGTIL  N  CY+TGWGL +TNG    TL+Q  L
Sbjct: 121 GYDIALIKLASPVTLSKNIQTACLPPAGTILPRNYVCYVTGWGLLQTNGNSPDTLRQGRL 180

Query: 620 PTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFV 796
             VDYA CSS+S+WGS+VK+SMVCAGGDGV S C GDSGGPL+C   NGQ+ VHG+ SF 
Sbjct: 181 LVVDYATCSSASWWGSSVKSSMVCAGGDGVTSSCNGDSGGPLNCRASNGQWQVHGIVSFG 240

Query: 797 SRLGCNVTRKPPVFTRVSAYIS*INNVVASN 889
           S LGCN  RKP VFTRVS YI  IN+V+A N
Sbjct: 241 SSLGCNYPRKPSVFTRVSNYIDWINSVMARN 271


>ref|NP_080695.1| elastase 3B, pancreatic [Mus musculus]
          Length = 269

 Score =  273 bits (699), Expect = 2e-73
 Identities = 143/270 (52%), Positives = 178/270 (65%), Gaps = 4/270 (1%)
 Frame = +2

Query: 92  MLRLLVVASLV-LYGHSTQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGT 268
           MLRLL    LV L     Q     ++RVV G EA  +SWP Q+SLQY    S+ HTCGG+
Sbjct: 1   MLRLLSSLLLVALASGCGQPSHNPSSRVVNGEEAVPHSWPWQVSLQYEKDGSFHHTCGGS 60

Query: 269 LIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQK--IVVHPYWNTDDVAAG 442
           LI  +WV+TA HC+    T++VV+GEH     +G EQ + +    + VHP WN+  V+ G
Sbjct: 61  LITPDWVLTAGHCISTSRTYQVVLGEHERGVEEGQEQVIPINAGDLFVHPKWNSMCVSCG 120

Query: 443 YDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLP 622
            DIAL++L++S  L   VQL  LP AG IL N +PCYI+GWG   TNG L   LQQA LP
Sbjct: 121 NDIALVKLSRSAQLGDAVQLACLPPAGEILPNGAPCYISGWGRLSTNGPLPDKLQQALLP 180

Query: 623 TVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFVS 799
            VDY  CS  ++WG +VK +MVCAGGD ++SGC GDSGGPL+C   NG + VHGVTSFVS
Sbjct: 181 VVDYEHCSRWNWWGLSVKTTMVCAGGD-IQSGCNGDSGGPLNCPADNGTWQVHGVTSFVS 239

Query: 800 RLGCNVTRKPPVFTRVSAYIS*INNVVASN 889
            LGCN  RKP VFTRVSA+I  I   +A+N
Sbjct: 240 SLGCNTLRKPTVFTRVSAFIDWIEETIANN 269


>ref|NP_001029047.1| chymotrypsin C (caldecrin) [Mus musculus]
          Length = 268

 Score =  238 bits (607), Expect = 9e-63
 Identities = 124/268 (46%), Positives = 168/268 (62%), Gaps = 5/268 (1%)
 Frame = +2

Query: 92  MLRLLVVASLVLYGHSTQDF---PETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCG 262
           ML + V+A+++    S  D    P  +ARVVGG +A  NSWP Q+SLQY    +W HTCG
Sbjct: 1   MLGITVLAAILACASSCGDPTFPPNLSARVVGGEDAVPNSWPWQVSLQYLRDDTWRHTCG 60

Query: 263 GTLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQ-YVGVQKIVVHPYWNTDDVAA 439
           G+LI  + V+TAAHC++  LT+RV +G++NL   D     Y  V  I VH  WN   +  
Sbjct: 61  GSLITTSHVLTAAHCINTNLTYRVGLGKYNLTVEDEEGSVYAEVDTIYVHEKWNR--LLL 118

Query: 440 GYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYL 619
             DIA+++LA+ V L+  +Q+  +P   ++L  + PCY+TGWG   TNG +A+ LQQ   
Sbjct: 119 WNDIAIIKLAEPVELSDTIQVACIPEQDSLLPGDYPCYVTGWGRLWTNGPIAEVLQQGLQ 178

Query: 620 PTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLV-NGQYAVHGVTSFV 796
           P V++  CS   +W   V+ +MVCAGGDGV S C GDSGGPL+C V +G + VHG+ SF 
Sbjct: 179 PIVNHTTCSRLDWWFIKVRETMVCAGGDGVISACNGDSGGPLNCPVEDGLWQVHGIVSFG 238

Query: 797 SRLGCNVTRKPPVFTRVSAYIS*INNVV 880
           S  GCN  +KP VFTRVSAYI  I   +
Sbjct: 239 SSRGCNTYKKPVVFTRVSAYIDWIKEKI 266


>ref|XP_995055.1| PREDICTED: similar to elastase 3B, pancreatic [Mus musculus]
          Length = 155

 Score =  182 bits (463), Expect = 5e-46
 Identities = 92/154 (59%), Positives = 110/154 (71%), Gaps = 1/154 (0%)
 Frame = +2

Query: 431 VAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQ 610
           V+ G DIAL++L++S  L   VQL  LP AG IL N +PCYI+GWG   TNG L   LQQ
Sbjct: 3   VSCGNDIALVKLSRSAQLGDAVQLACLPPAGEILPNGAPCYISGWGRLSTNGPLPDKLQQ 62

Query: 611 AYLPTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLV-NGQYAVHGVT 787
           A LP VDY  CS  ++WG +VK +MVCAGGD ++SGC GDSGGPL+C   NG + VHGVT
Sbjct: 63  ALLPVVDYEHCSRWNWWGLSVKTTMVCAGGD-IQSGCNGDSGGPLNCPADNGTWQVHGVT 121

Query: 788 SFVSRLGCNVTRKPPVFTRVSAYIS*INNVVASN 889
           SFVS LGCN  RKP VFTRVSA+I  I   +A+N
Sbjct: 122 SFVSSLGCNTLRKPTVFTRVSAFIDWIEETIANN 155


>ref|NP_075671.1| chymotrypsin-like [Mus musculus]
          Length = 264

 Score =  157 bits (398), Expect = 2e-38
 Identities = 101/274 (36%), Positives = 140/274 (51%), Gaps = 8/274 (2%)
 Frame = +2

Query: 92  MLRLLVVASLVLYGHS-------TQDFPETNARVVGGTEAQRNSWPSQISLQYRSGSSWA 250
           ML L +  SLVL G S              N R+V G  A   SWP Q+SLQ  +G    
Sbjct: 1   MLLLSLTLSLVLLGSSWGCGVPAITPALSYNQRIVNGENAVPGSWPWQVSLQDNTGF--- 57

Query: 251 HTCGGTLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDD 430
           H CGG+LI  NWV+TAAHC        VV+GE++ + N    Q + + + + HP WN + 
Sbjct: 58  HFCGGSLISPNWVVTAAHCQVTPGRHFVVLGEYDRSSNAEPVQVLSIARAITHPNWNANT 117

Query: 431 VAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQT-LQ 607
           +    D+ LL+LA      + V    L      L +   C  TGWG     G +    LQ
Sbjct: 118 M--NNDLTLLKLASPARYTAQVSPVCLASTNEALPSGLTCVTTGWGRISGVGNVTPARLQ 175

Query: 608 QAYLPTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVT 787
           Q  LP V    C    YWG+ + ++M+CAGG G  S CQGDSGGPL C     + + G+ 
Sbjct: 176 QVVLPLVTVNQC--RQYWGARITDAMICAGGSGA-SSCQGDSGGPLVCQKGNTWVLIGIV 232

Query: 788 SFVSRLGCNVTRKPPVFTRVSAYIS*INNVVASN 889
           S+ ++  CN+ + P ++TRVS + + IN V+A N
Sbjct: 233 SWGTK-NCNI-QAPAMYTRVSKFSTWINQVMAYN 264


>ref|NP_032903.2| plasminogen [Mus musculus]
          Length = 812

 Score =  155 bits (392), Expect = 8e-38
 Identities = 97/247 (39%), Positives = 138/247 (55%), Gaps = 6/247 (2%)
 Frame = +2

Query: 167  RVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRELT---FRVV 337
            RVVGG  A  +SWP QISL+ R      H CGGTLI   WV+TAAHC+++      ++V+
Sbjct: 581  RVVGGCVANPHSWPWQISLRTRFTGQ--HFCGGTLIAPEWVLTAAHCLEKSSRPEFYKVI 638

Query: 338  VGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPR 517
            +G H         Q + V K+++ P           DIALL+L++  T+   V    LP 
Sbjct: 639  LGAHEEYIRGSDVQEISVAKLILEPN--------NRDIALLKLSRPATITDKVIPACLPS 690

Query: 518  AGTILANNSPCYITGWGLTR-TNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCA 694
               ++A+ + CYITGWG T+ T G  A  L++A LP ++  +C+   Y  + VK++ +CA
Sbjct: 691  PNYMVADRTICYITGWGETQGTFG--AGRLKEAQLPVIENKVCNRVEYLNNRVKSTELCA 748

Query: 695  G--GDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPPVFTRVSAYIS*I 868
            G    GV S CQGDSGGPL C    +Y + GVTS+   LGC    KP V+ RVS ++  I
Sbjct: 749  GQLAGGVDS-CQGDSGGPLVCFEKDKYILQGVTSW--GLGCARPNKPGVYVRVSRFVDWI 805

Query: 869  NNVVASN 889
               + +N
Sbjct: 806  EREMRNN 812


>ref|NP_082342.1| coagulation factor XI [Mus musculus]
          Length = 624

 Score =  153 bits (386), Expect = 4e-37
 Identities = 87/238 (36%), Positives = 134/238 (56%), Gaps = 5/238 (2%)
 Frame = +2

Query: 161  NARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHC---VDRELTFR 331
            N RVVGG  +    WP Q++L    G    H CGG++I   W++TAAHC   ++     R
Sbjct: 387  NPRVVGGAASVHGEWPWQVTLHISQG----HLCGGSIIGNQWILTAAHCFSGIETPKKLR 442

Query: 332  VVVGEHNLNQ-NDGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGV 508
            V  G  N ++ N+GT  +  VQ++++H  + T +  +GYDIALL+L  ++    + +   
Sbjct: 443  VYGGIVNQSEINEGTA-FFRVQEMIIHDQYTTAE--SGYDIALLKLESAMNYTDFQRPIC 499

Query: 509  LPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMV 688
            LP  G   A ++ C++TGWG T   G++  TLQ+A +P V    C  + Y    + N M+
Sbjct: 500  LPSKGDRNAVHTECWVTGWGYTALRGEVQSTLQKAKVPLVSNEEC-QTRYRRHKITNKMI 558

Query: 689  CAG-GDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPPVFTRVSAYI 859
            CAG  +G +  C+GDSGGPL C  NG + + G+TS+    GC    +P V+T V+ Y+
Sbjct: 559  CAGYKEGGKDTCKGDSGGPLSCKYNGVWHLVGITSWGE--GCGQKERPGVYTNVAKYV 614


>ref|NP_081496.1| tryptase 5 [Mus musculus]
          Length = 331

 Score =  148 bits (374), Expect = 1e-35
 Identities = 90/256 (35%), Positives = 142/256 (55%), Gaps = 13/256 (5%)
 Frame = +2

Query: 152 PETNARVVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRELT-- 325
           P T+ R+V G +AQ   WP Q+S++     + AH CGG+LI ++WV+TAAHC ++  +  
Sbjct: 48  PRTSGRIVSGQDAQLGRWPWQVSVR----ENGAHVCGGSLIAEDWVLTAAHCFNQGQSLS 103

Query: 326 -FRVVVGEHNLNQNDGTEQYV-GVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQ 499
            + V++G  +    D   + +  V + + HP ++ D+ ++G DIAL++LA  ++ N Y+ 
Sbjct: 104 IYTVLLGTISSYPEDNEPKELRAVAQFIKHPSYSADEHSSG-DIALVQLASPISFNDYML 162

Query: 500 LGVLPRAGTILANNSPCYITGWGLTRTNGQLAQ--TLQQAYLPTVDYAICSSSSYWGS-- 667
              LP+ G  L   + C++TGWG   TN  L    TLQ+  +P +D   C++     S  
Sbjct: 163 PVCLPKPGDPLDPGTMCWVTGWGHIGTNQPLPPPFTLQELQVPLIDAETCNTYYQENSIP 222

Query: 668 ----TVKNSMVCAG-GDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPP 832
                +   M+CAG   G +  C GDSGGPL C +N  +   GV S+ S   C + ++P 
Sbjct: 223 GTEPVILEGMLCAGFQQGKKDACNGDSGGPLVCDINDVWIQAGVVSWGS--DCALFKRPG 280

Query: 833 VFTRVSAYIS*INNVV 880
           V+T VS YIS I N +
Sbjct: 281 VYTNVSVYISWIQNTM 296


>ref|NP_034911.2| mast cell protease 6 [Mus musculus]
          Length = 276

 Score =  148 bits (374), Expect = 1e-35
 Identities = 100/277 (36%), Positives = 144/277 (51%), Gaps = 16/277 (5%)
 Frame = +2

Query: 98  RLLVVASLVLYGHSTQDFPE-TNARV--VGGTEAQRNSWPSQISLQYRSGSSWAHTCGGT 268
           RLL++ +L L        P   N RV  VGG EA  + WP Q+SL+++  + W H CGG+
Sbjct: 5   RLLLLWALSLLASLVYSAPRPANQRVGIVGGHEASESKWPWQVSLRFKL-NYWIHFCGGS 63

Query: 269 LIRQNWVMTAAHCVDREL----TFRVVVGEHNLNQNDGTEQYVGVQKIVVHPYWNTDDVA 436
           LI   WV+TAAHCV   +     FRV + E  L   D   Q + + +IVVHP++ T +  
Sbjct: 64  LIHPQWVLTAAHCVGPHIKSPQLFRVQLREQYLYYGD---QLLSLNRIVVHPHYYTAE-- 118

Query: 437 AGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQL--AQTLQQ 610
            G D+ALL L   V +++++    LP A       + C++TGWG    +  L     L+Q
Sbjct: 119 GGADVALLELEVPVNVSTHIHPISLPPASETFPPGTSCWVTGWGDIDNDEPLPPPYPLKQ 178

Query: 611 AYLPTVDYAICSSSSYWG-------STVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQY 769
             +P V+ ++C    + G         V + M+CAG    R  CQGDSGGPL C V G +
Sbjct: 179 VKVPIVENSLCDRKYHTGLYTGDDFPIVHDGMLCAGNTR-RDSCQGDSGGPLVCKVKGTW 237

Query: 770 AVHGVTSFVSRLGCNVTRKPPVFTRVSAYIS*INNVV 880
              GV S+    GC    KP ++TRV+ Y+  I+  V
Sbjct: 238 LQAGVVSWGE--GCAQPNKPGIYTRVTYYLDWIHRYV 272


  Database: RefSeqMP
    Posted date:  Aug 2, 2006 12:58 AM
  Number of letters in database: 21,768,885
  Number of sequences in database:  45,328
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,501,293
Number of Sequences: 45328
Number of extensions: 1686972
Number of successful extensions: 8301
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 5498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7588
length of database: 21,768,885
effective HSP length: 106
effective length of database: 16,964,117
effective search space used: 5004414515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)