Animal-Genome cDNA 20060611S-058035


Search to RefSeqSP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-058035
         (773 letters)

Database: RefSeqSP 
           1040 sequences; 434,620 total letters

Searching...done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_999238.1| 20-beta-hydroxysteroid dehydrogenase [Sus scrofa]    413   e-117
Alignment   gi|NP_999184.1| carbonyl reductase/NADP-retinol dehydrogenase [...    46   9e-07
Alignment   gi|NP_999413.1| 11-beta hydroxysteroid dehydrogenase isoform 1 ...    44   6e-06

>ref|NP_999238.1| 20-beta-hydroxysteroid dehydrogenase [Sus scrofa]
          Length = 289

 Score =  413 bits (1061), Expect = e-117
 Identities = 208/218 (95%), Positives = 213/218 (97%)
 Frame = +2

Query: 116 MSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH 295
           MSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH
Sbjct: 1   MSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH 60

Query: 296 QLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRN 475
           QLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRN
Sbjct: 61  QLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRN 120

Query: 476 VCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELGGLMNKFVEDTK 655
           VCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEEL GLMNKFVEDTK
Sbjct: 121 VCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELVGLMNKFVEDTK 180

Query: 656 NGVHRKEGWXDSTYGLTKIGVSVVVRIYARKLKKPKTG 769
           NGVHRKEGW DSTYG+TKIGVSV+ RIYARKL++ + G
Sbjct: 181 NGVHRKEGWSDSTYGVTKIGVSVLSRIYARKLREQRAG 218


>ref|NP_999184.1| carbonyl reductase/NADP-retinol dehydrogenase [Sus scrofa]
          Length = 260

 Score = 46.2 bits (108), Expect = 9e-07
 Identities = 32/88 (36%), Positives = 44/88 (50%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQLDII 310
           +VALVT +  GIG AI R L  Q    VV+++R        V  LQ EGLS       + 
Sbjct: 15  KVALVTASTDGIGLAIARRLA-QDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVG 73

Query: 311 DLQSIRALCDFLRKEYGGLDVLVNNAAI 394
             +    L       +GG+D+LV+NAA+
Sbjct: 74  KAEDRERLVAMAVNLHGGVDILVSNAAV 101


>ref|NP_999413.1| 11-beta hydroxysteroid dehydrogenase isoform 1 [Sus scrofa]
          Length = 292

 Score = 43.5 bits (101), Expect = 6e-06
 Identities = 53/211 (25%), Positives = 82/211 (38%), Gaps = 2/211 (0%)
 Frame = +2

Query: 110 PAMSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPR 289
           P M    +V +VTGA+KGIG  +   L R  A  VV    +    +     L+    S  
Sbjct: 29  PEMLRGKKV-IVTGASKGIGREMAYHLARMGAHVVVTARSEETLKKVVSHSLELGASSAH 87

Query: 290 FHQLDIIDLQSIRALCDFLRKEYGGLDVLV-NNAAIAFQLDNPTPFHIQAELTMKTNFMG 466
           +    + D+           K  GGLD+L+ N+   AF        H+    +M+ NF+ 
Sbjct: 88  YVAGTMEDMTFAEQFVAKAGKLLGGLDMLILNHITQAFMTSVYDDIHL-VRRSMEVNFLS 146

Query: 467 TRNVCTELLPLIK-PQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELGGLMNKFV 643
              +    LP++K   G +V VSS  G  A    +P    KF         L G  +   
Sbjct: 147 YVVLSVAALPMLKQSNGSIVVVSSQAGKMANPLVAPYSASKF--------ALDGFFSSIT 198

Query: 644 EDTKNGVHRKEGWXDSTYGLTKIGVSVVVRI 736
           ++               Y +TK+ VS+ + I
Sbjct: 199 KE---------------YSVTKVNVSITLCI 214


  Database: RefSeqSP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 434,620
  Number of sequences in database:  1040
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 779,866
Number of Sequences: 1040
Number of extensions: 21024
Number of successful extensions: 104
Number of sequences better than 1.0e-05: 3
Number of HSP's better than  0.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of database: 434,620
effective HSP length: 75
effective length of database: 356,620
effective search space used: 64904840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqBP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-058035
         (773 letters)

Database: RefSeqBP 
           33,508 sequences; 16,112,626 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001029685.1| carbonyl reductase 1 [Bos taurus]                 338   3e-93
Alignment   gi|NP_001030258.1| 20-beta-hydroxysteroid dehydrogenase-like [B...   338   3e-93
Alignment   gi|XP_874747.1| PREDICTED: similar to Carbonyl reductase [NADPH...   330   6e-91
Alignment   gi|XP_869745.1| PREDICTED: similar to carbonyl reductase 3 isof...   323   7e-89
Alignment   gi|XP_868956.1| PREDICTED: similar to Carbonyl reductase [NADPH...   189   2e-48
Alignment   gi|XP_878838.1| PREDICTED: similar to carbonyl reductase 3 isof...   147   9e-36
Alignment   gi|XP_594165.2| PREDICTED: similar to carbonyl reductase 3 isof...   147   9e-36
Alignment   gi|XP_584642.2| PREDICTED: similar to retinol dehydrogenase 11 ...    66   3e-11
Alignment   gi|NP_899207.1| double substrate-specificity short chain dehydr...    61   1e-09
Alignment   gi|XP_592820.2| PREDICTED: similar to retinol dehydrogenase 11 ...    60   2e-09

>ref|NP_001029685.1| carbonyl reductase 1 [Bos taurus]
          Length = 277

 Score =  338 bits (867), Expect = 3e-93
 Identities = 173/218 (79%), Positives = 192/218 (88%)
 Frame = +2

Query: 116 MSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH 295
           MSS+  VALVTGANKGIGF IVRDLCR+F+GDVVLTARD ARG+AAV+QLQAEGLSP FH
Sbjct: 1   MSSSNCVALVTGANKGIGFVIVRDLCRRFSGDVVLTARDEARGRAAVQQLQAEGLSPLFH 60

Query: 296 QLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRN 475
           QLDI D QSIRAL DFLRKEYGGLDVLVNNA IAF+  + TPFHIQAE+TMKTNF GTR+
Sbjct: 61  QLDIDDRQSIRALRDFLRKEYGGLDVLVNNAGIAFKTADTTPFHIQAEVTMKTNFFGTRD 120

Query: 476 VCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELGGLMNKFVEDTK 655
           VCTELLPLIKPQGRVVNVSS   V +L +CS ELQQKF+SETITEEEL GLMNKFVEDTK
Sbjct: 121 VCTELLPLIKPQGRVVNVSSFVSVNSLKKCSRELQQKFRSETITEEELVGLMNKFVEDTK 180

Query: 656 NGVHRKEGWXDSTYGLTKIGVSVVVRIYARKLKKPKTG 769
           NGVHRKEGW D+ YG+TKIGV+V+ RI+ARKL + + G
Sbjct: 181 NGVHRKEGWPDTAYGVTKIGVTVLSRIHARKLSEQRGG 218


>ref|NP_001030258.1| 20-beta-hydroxysteroid dehydrogenase-like [Bos taurus]
          Length = 286

 Score =  338 bits (867), Expect = 3e-93
 Identities = 172/219 (78%), Positives = 193/219 (88%), Gaps = 1/219 (0%)
 Frame = +2

Query: 116 MSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH 295
           MSS+TRVALVTGANKG+GFAIVRDLCR+F GDVVLTARD ARG+AAV+QLQAEGLSPRFH
Sbjct: 1   MSSSTRVALVTGANKGLGFAIVRDLCRRFPGDVVLTARDEARGRAAVQQLQAEGLSPRFH 60

Query: 296 QLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRN 475
           QLDI DLQSI AL DFLRKEYGGLDVLVNNAAIAFQL +PTP  I+AE+TMKTNF GTR+
Sbjct: 61  QLDITDLQSIHALRDFLRKEYGGLDVLVNNAAIAFQLSDPTPTPIKAEMTMKTNFFGTRD 120

Query: 476 VCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELGGLMNKFVEDTK 655
           +CTELLPL+KPQGRVVN+SS  G +AL  CSPELQQK +SETITEEEL GLMNKFVEDTK
Sbjct: 121 ICTELLPLMKPQGRVVNMSSGWGFKALESCSPELQQKLRSETITEEELVGLMNKFVEDTK 180

Query: 656 NGVHRKEGWXDST-YGLTKIGVSVVVRIYARKLKKPKTG 769
           NGVHRKEGW D+  YG+ KIG++ + RI ARKL + + G
Sbjct: 181 NGVHRKEGWPDNNIYGVAKIGITALSRIQARKLSEQRGG 219


>ref|XP_874747.1| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
           carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase)
           (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin
           dehydrogenase [NADP+]) [Bos taurus]
          Length = 277

 Score =  330 bits (847), Expect = 6e-91
 Identities = 169/218 (77%), Positives = 191/218 (87%)
 Frame = +2

Query: 116 MSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH 295
           MSS+TRVALVTGANKG+GFAIVR L   F GDVVLTA D A+G+AAV+QLQA+GLSP FH
Sbjct: 1   MSSSTRVALVTGANKGLGFAIVRALAGGFQGDVVLTAPDEAQGRAAVQQLQAQGLSPLFH 60

Query: 296 QLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRN 475
           QLDI D QSIRAL DFLRKEYGGLDVLVNNA IAF+  + TPFHIQAE+TMKTNF GTR+
Sbjct: 61  QLDIDDRQSIRALRDFLRKEYGGLDVLVNNAGIAFKTADTTPFHIQAEVTMKTNFFGTRD 120

Query: 476 VCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELGGLMNKFVEDTK 655
           VCTELLPLIKPQGRVVNVSS+  V +L +CSPELQQKF+SETITEEEL GLMNKFVEDTK
Sbjct: 121 VCTELLPLIKPQGRVVNVSSSVSVSSLKKCSPELQQKFQSETITEEELVGLMNKFVEDTK 180

Query: 656 NGVHRKEGWXDSTYGLTKIGVSVVVRIYARKLKKPKTG 769
           NGVHRKEGW D+ YG+TKIGV+V+ RI+ARK+ + + G
Sbjct: 181 NGVHRKEGWPDTAYGVTKIGVTVLSRIHARKMSEQRGG 218


>ref|XP_869745.1| PREDICTED: similar to carbonyl reductase 3 isoform 2 [Bos taurus]
          Length = 277

 Score =  323 bits (829), Expect = 7e-89
 Identities = 160/216 (74%), Positives = 189/216 (87%)
 Frame = +2

Query: 116 MSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH 295
           MSS TRVALVTGANKGIGFAI RDLCR+F GDVVLTARD ARG+AAV+QLQAEGLSPRFH
Sbjct: 1   MSSYTRVALVTGANKGIGFAIARDLCREFPGDVVLTARDKARGRAAVQQLQAEGLSPRFH 60

Query: 296 QLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRN 475
           QLDI DLQSIRAL DFLRKEYGGL+VLVNNA IAF+ D+PTPF IQAE+T+KTNF  TRN
Sbjct: 61  QLDIDDLQSIRALRDFLRKEYGGLNVLVNNAGIAFKTDDPTPFDIQAEMTLKTNFFATRN 120

Query: 476 VCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELGGLMNKFVEDTK 655
           VCTELLP++KP GRVVNVSS++G +AL  CS +LQ+KF+ ET+TEE+L  LM KFVEDTK
Sbjct: 121 VCTELLPIVKPHGRVVNVSSSQGSQALENCSEDLQEKFRCETLTEEDLVDLMKKFVEDTK 180

Query: 656 NGVHRKEGWXDSTYGLTKIGVSVVVRIYARKLKKPK 763
           N VH +EGW +S YG++K+GV+V+ RI AR+L++ +
Sbjct: 181 NEVHEREGWPNSAYGVSKLGVTVLSRILARRLEEKR 216


>ref|XP_868956.1| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
           carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase)
           (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin
           dehydrogenase [NADP+]) [Bos taurus]
          Length = 327

 Score =  189 bits (480), Expect = 2e-48
 Identities = 112/212 (52%), Positives = 135/212 (63%)
 Frame = +2

Query: 134 VALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQLDIID 313
           +ALVTGANKGIG A++        G      R     +AA +          FH+   + 
Sbjct: 1   MALVTGANKGIGLAVL------LLGGAGTGDRGCIHIRAAPRGSARRPPPLSFHEWRPLG 54

Query: 314 LQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRNVCTELL 493
                           G+     +AA      + TPF IQAE+TMKTNF GTR VCTELL
Sbjct: 55  -----------GSPAAGISTHWISAA------DTTPFPIQAEVTMKTNFFGTRVVCTELL 97

Query: 494 PLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELGGLMNKFVEDTKNGVHRK 673
           PL+KPQGRVVNVSS+  V +L +CSPELQQKF+SETITEEEL GLMNKFVEDTKNGVHRK
Sbjct: 98  PLLKPQGRVVNVSSSVSVTSLKKCSPELQQKFQSETITEEELVGLMNKFVEDTKNGVHRK 157

Query: 674 EGWXDSTYGLTKIGVSVVVRIYARKLKKPKTG 769
           EGW D+ YG+TKIGV+V+ RI+ARKL + + G
Sbjct: 158 EGWRDTAYGVTKIGVTVLFRIHARKLSEQRGG 189


>ref|XP_878838.1| PREDICTED: similar to carbonyl reductase 3 isoform 3 [Bos taurus]
          Length = 169

 Score =  147 bits (371), Expect = 9e-36
 Identities = 67/108 (62%), Positives = 90/108 (83%)
 Frame = +2

Query: 440 LTMKTNFMGTRNVCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEEL 619
           +T+KTNF  TRNVCTELLP++KP GRVVNVSS++G +AL  CS +LQ+KF+ ET+TEE+L
Sbjct: 1   MTLKTNFFATRNVCTELLPIVKPHGRVVNVSSSQGSQALENCSEDLQEKFRCETLTEEDL 60

Query: 620 GGLMNKFVEDTKNGVHRKEGWXDSTYGLTKIGVSVVVRIYARKLKKPK 763
             LM KFVEDTKN VH +EGW +S YG++K+GV+V+ RI AR+L++ +
Sbjct: 61  VDLMKKFVEDTKNEVHEREGWPNSAYGVSKLGVTVLSRILARRLEEKR 108


>ref|XP_594165.2| PREDICTED: similar to carbonyl reductase 3 isoform 1 [Bos taurus]
          Length = 169

 Score =  147 bits (371), Expect = 9e-36
 Identities = 67/108 (62%), Positives = 90/108 (83%)
 Frame = +2

Query: 440 LTMKTNFMGTRNVCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEEL 619
           +T+KTNF  TRNVCTELLP++KP GRVVNVSS++G +AL  CS +LQ+KF+ ET+TEE+L
Sbjct: 1   MTLKTNFFATRNVCTELLPIVKPHGRVVNVSSSQGSQALENCSEDLQEKFRCETLTEEDL 60

Query: 620 GGLMNKFVEDTKNGVHRKEGWXDSTYGLTKIGVSVVVRIYARKLKKPK 763
             LM KFVEDTKN VH +EGW +S YG++K+GV+V+ RI AR+L++ +
Sbjct: 61  VDLMKKFVEDTKNEVHEREGWPNSAYGVSKLGVTVLSRILARRLEEKR 108


>ref|XP_584642.2| PREDICTED: similar to retinol dehydrogenase 11 (predicted) [Bos
           taurus]
          Length = 330

 Score = 65.9 bits (159), Expect = 3e-11
 Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPR--FHQLD 304
           + A+VTGAN GIG A+ ++L  + A  V+L  R   RGQ A+ ++QA   S R    ++D
Sbjct: 50  KTAVVTGANSGIGKAVSQELAHRGA-RVILACRSRERGQQALAEIQATSKSNRLLLGEVD 108

Query: 305 IIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRNVCT 484
           +  + SIR+    L +E   + +LVNNAA+       TP  +  +LT  TN+ G   +  
Sbjct: 109 LSSMASIRSFAQRLLQECPEIHLLVNNAAVCGFPTTLTPEGL--DLTFATNYTGPFLLTN 166

Query: 485 ELLPLIKPQG--RVVNVSS 535
            L   ++  G  RVVNVSS
Sbjct: 167 LLQGALQRAGSARVVNVSS 185


>ref|NP_899207.1| double substrate-specificity short chain dehydrogenase/reductase 2
           [Bos taurus]
          Length = 316

 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRF--HQLD 304
           +V ++TGAN GIG    R+L R+ A  V +  RDV +G++A  ++QA+  + +    +LD
Sbjct: 40  KVVVITGANTGIGKETARELARRGAR-VYIACRDVLKGESAASEIQADTKNSQVLVRKLD 98

Query: 305 IIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRNVCT 484
           + D +SIRA  +    E   L +L+NNA +     + T    +  L +  N +G   +  
Sbjct: 99  LSDTKSIRAFAEGFLAEEKQLHILINNAGVMLCPYSKTADGFETHLAV--NHLGHFLLTH 156

Query: 485 ELLPLIKPQ--GRVVNVSS 535
            LL  +K     RVVN+SS
Sbjct: 157 LLLGRLKESAPARVVNLSS 175


>ref|XP_592820.2| PREDICTED: similar to retinol dehydrogenase 11 (predicted) [Bos
           taurus]
          Length = 377

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 51/139 (36%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPR--FHQLD 304
           R A+VTGAN GIG     +L R+ A  VVL  R   RG+AA   L+ E  +    F  LD
Sbjct: 37  RTAVVTGANSGIGKMTALELARRGAR-VVLACRSRERGEAAAFDLRQESGNNEVIFMALD 95

Query: 305 IIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRNVCT 484
           +  L S+RA           LD+L++NA I+       PF+    L ++ N +G   +  
Sbjct: 96  LASLASVRAFATAFLSSEPRLDILIHNAGISSCGRTREPFN----LLLRVNHIGPFLLTH 151

Query: 485 ELLPLIKPQ--GRVVNVSS 535
            LLP +K     RVV VSS
Sbjct: 152 LLLPRLKTSAPSRVVVVSS 170


  Database: RefSeqBP
    Posted date:  Aug 1, 2006  7:14 PM
  Number of letters in database: 16,112,626
  Number of sequences in database:  33,508
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,120,030
Number of Sequences: 33508
Number of extensions: 823871
Number of successful extensions: 4452
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 3710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4385
length of database: 16,112,626
effective HSP length: 99
effective length of database: 12,795,334
effective search space used: 2021662772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqCP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-058035
         (773 letters)

Database: RefSeqCP 
           33,732 sequences; 19,266,565 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|XP_852675.1| PREDICTED: similar to Carbonyl reductase [NADPH...   344   6e-95
Alignment   gi|XP_544873.2| PREDICTED: similar to carbonyl reductase 3 [Can...   317   1e-86
Alignment   gi|XP_537903.1| PREDICTED: similar to Carbonyl reductase [NADPH...   309   2e-84
Alignment   gi|XP_535589.2| PREDICTED: similar to Carbonyl reductase [NADPH...   309   2e-84
Alignment   gi|XP_533000.2| PREDICTED: similar to Retinol dehydrogenase 12 ...    73   3e-13
Alignment   gi|XP_548293.2| PREDICTED: similar to retinol dehydrogenase 11 ...    59   4e-09
Alignment   gi|XP_547866.2| PREDICTED: similar to retinol dehydrogenase 12 ...    59   5e-09
Alignment   gi|XP_854127.1| PREDICTED: similar to Retinol dehydrogenase 13 ...    58   1e-08
Alignment   gi|XP_547738.2| PREDICTED: similar to dehydrogenase/reductase (...    57   2e-08
Alignment   gi|XP_540096.2| PREDICTED: similar to retinol dehydrogenase 14 ...    55   6e-08

>ref|XP_852675.1| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
           carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase)
           (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin
           dehydrogenase [NADP+]) [Canis familiaris]
          Length = 277

 Score =  344 bits (882), Expect = 6e-95
 Identities = 173/216 (80%), Positives = 193/216 (89%)
 Frame = +2

Query: 116 MSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH 295
           MS+ +RVALVTGANKGIGFAI R+LCRQF+GDVVLTARD ARG+AAV+QLQAEGLSPRFH
Sbjct: 1   MSAASRVALVTGANKGIGFAIARELCRQFSGDVVLTARDEARGRAAVQQLQAEGLSPRFH 60

Query: 296 QLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRN 475
            LDI DLQSIRAL DFLRKEYGGLDVLVNNA IAF+ ++PTPFHIQAE+TMKTNF GTR+
Sbjct: 61  LLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKTNDPTPFHIQAEVTMKTNFFGTRD 120

Query: 476 VCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELGGLMNKFVEDTK 655
           VCTELLPL+KPQGRVVNVSS   VRAL  CSPELQQKF+SE ITEEEL GLMNKFVEDTK
Sbjct: 121 VCTELLPLMKPQGRVVNVSSVVSVRALKSCSPELQQKFRSEAITEEELVGLMNKFVEDTK 180

Query: 656 NGVHRKEGWXDSTYGLTKIGVSVVVRIYARKLKKPK 763
            GVHR EGW D+ YG+TKIGV+V+ RI+ARKL + +
Sbjct: 181 KGVHRNEGWPDNAYGVTKIGVTVLSRIHARKLSEQR 216


>ref|XP_544873.2| PREDICTED: similar to carbonyl reductase 3 [Canis familiaris]
          Length = 484

 Score =  317 bits (811), Expect = 1e-86
 Identities = 160/227 (70%), Positives = 189/227 (83%)
 Frame = +2

Query: 83  SPRQSTYTTPAMSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQ 262
           SPR      PAMSS +RVALVTGAN+GIGFAI R+LCRQF+GDVVLTARD ARG+AAV+Q
Sbjct: 197 SPRAPGPPLPAMSSCSRVALVTGANRGIGFAIARELCRQFSGDVVLTARDEARGRAAVQQ 256

Query: 263 LQAEGLSPRFHQLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAEL 442
           LQAEGLSPRFH LDI DLQSIRAL DFLRKEYGGL+VLVNNA IAF+ D+PTPF IQAE+
Sbjct: 257 LQAEGLSPRFHLLDIDDLQSIRALRDFLRKEYGGLNVLVNNAGIAFKPDDPTPFDIQAEI 316

Query: 443 TMKTNFMGTRNVCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELG 622
           T+KTNF  TRNVC ELLP+IKP GRVVN+SS EG +AL  CS +LQ+KF+ ET+TEE+L 
Sbjct: 317 TLKTNFFATRNVCNELLPIIKPHGRVVNISSLEGSKALENCSADLQKKFQCETLTEEDLV 376

Query: 623 GLMNKFVEDTKNGVHRKEGWXDSTYGLTKIGVSVVVRIYARKLKKPK 763
            LM KFVEDT N VH +EGW +S YG++K+GV+V+ RI A +L + +
Sbjct: 377 DLMKKFVEDTSNEVHEREGWPNSAYGVSKLGVTVLSRILAWRLDEKR 423


>ref|XP_537903.1| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
           carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase)
           (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin
           dehydrogenase [NADP+]) [Canis familiaris]
          Length = 296

 Score =  309 bits (792), Expect = 2e-84
 Identities = 156/219 (71%), Positives = 183/219 (83%), Gaps = 3/219 (1%)
 Frame = +2

Query: 116 MSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH 295
           MS   RVA+VTGANKG+GFAI RDLCR F GDV+LT+RD ARG+AAV+ L+AEGLSPRFH
Sbjct: 1   MSLALRVAVVTGANKGLGFAITRDLCRNFPGDVILTSRDEARGRAAVQHLKAEGLSPRFH 60

Query: 296 QLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRN 475
            LDI +LQSIRAL DFL +EYGGLDVLVNNA I F  D+PTP HIQAE+T+KTNF GTR+
Sbjct: 61  LLDIDNLQSIRALRDFLWEEYGGLDVLVNNAGIVFTPDDPTPLHIQAEVTLKTNFFGTRD 120

Query: 476 VCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELGGLMNKFVEDTK 655
           +CTELLPL+KPQGRVVNVSS     AL +CSPELQQKF SETITEEELG LMNKF+ED K
Sbjct: 121 ICTELLPLVKPQGRVVNVSSIMSFLALKQCSPELQQKFTSETITEEELGMLMNKFLEDVK 180

Query: 656 NGVHRKEGWXD---STYGLTKIGVSVVVRIYARKLKKPK 763
           NGVH+KEGW D   + Y ++K+GV+V+ RI+ARKL + +
Sbjct: 181 NGVHKKEGWPDIKIAAYSVSKMGVTVLSRIHARKLSEQR 219


>ref|XP_535589.2| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
           carbonyl reductase 1) (Prostaglandin-E(2) 9-reductase)
           (Prostaglandin 9-ketoreductase) (15-hydroxyprostaglandin
           dehydrogenase [NADP+]) [Canis familiaris]
          Length = 292

 Score =  309 bits (791), Expect = 2e-84
 Identities = 158/221 (71%), Positives = 182/221 (82%), Gaps = 3/221 (1%)
 Frame = +2

Query: 116 MSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH 295
           MSS  RVA+VTGANKG+GFAI+RDLCR F+GDVVLTARD ARG+AAV+QLQ++GLSPRFH
Sbjct: 1   MSSAPRVAVVTGANKGLGFAIMRDLCRNFSGDVVLTARDEARGRAAVQQLQSKGLSPRFH 60

Query: 296 QLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRN 475
            LDI DLQSI  L DFL KEY GLDVLVNNA I F   +PTP  IQAE+T+KTNF GTRN
Sbjct: 61  LLDIDDLQSICTLRDFLCKEYRGLDVLVNNAGINFDTGDPTPLPIQAEVTLKTNFFGTRN 120

Query: 476 VCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELGGLMNKFVEDTK 655
           VC ELLPL+KPQGRVVNVSS  G   L +CSPELQQKF SE ITEEELG LMNKFVED K
Sbjct: 121 VCRELLPLMKPQGRVVNVSSVMGFVTLKQCSPELQQKFTSEAITEEELGMLMNKFVEDVK 180

Query: 656 NGVHRKEGWXDS---TYGLTKIGVSVVVRIYARKLKKPKTG 769
           NGVH+KEGW D    TYG++K+G++++ RI+ARKL + + G
Sbjct: 181 NGVHKKEGWPDMKLVTYGISKMGITILSRIHARKLSEQRRG 221


>ref|XP_533000.2| PREDICTED: similar to Retinol dehydrogenase 12 [Canis familiaris]
          Length = 596

 Score = 72.8 bits (177), Expect = 3e-13
 Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 4/139 (2%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQ--AEGLSPRFHQLD 304
           + A+VTGAN GIG A+ ++L R+ A  V+L  R+  RGQ A+ ++Q  ++G      Q+D
Sbjct: 316 KTAVVTGANSGIGKAVCQELARRGAR-VILACRNWERGQKALAEIQVASKGTCLLLGQVD 374

Query: 305 IIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRNVCT 484
           +  + SIR+   +L +EY  + +LVNNAAI+      TP  +  +LT  TN++G   +  
Sbjct: 375 LSSMASIRSFARWLLQEYPEIHLLVNNAAISGFPKTLTPEGL--DLTFATNYVGPFLLTN 432

Query: 485 ELLPLIKPQG--RVVNVSS 535
            L   ++  G  RVVNVSS
Sbjct: 433 LLQGALQRAGSARVVNVSS 451


>ref|XP_548293.2| PREDICTED: similar to retinol dehydrogenase 11 (predicted) [Canis
           familiaris]
          Length = 377

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 51/139 (36%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPR--FHQLD 304
           R A+VTGAN GIG     +L R+ A  VVL  R   RG+AA   L+ E  +    F  LD
Sbjct: 37  RTAVVTGANSGIGKMTALELARRGAR-VVLACRSRERGEAAAFDLRQESGNNEVIFMALD 95

Query: 305 IIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRNVCT 484
           +  L S+RA           LD+L++NA I+       PF+    L ++ N +G   +  
Sbjct: 96  LASLASVRAFATAFLSSEPRLDILIHNAGISSCGRTHKPFN----LLLRVNHIGPFLLTH 151

Query: 485 ELLPLIK--PQGRVVNVSS 535
            LLP +K     RVV VSS
Sbjct: 152 LLLPRLKTCAPSRVVVVSS 170


>ref|XP_547866.2| PREDICTED: similar to retinol dehydrogenase 12 (all-trans and
           9-cis) [Canis familiaris]
          Length = 303

 Score = 58.9 bits (141), Expect = 5e-09
 Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRF--HQLD 304
           +V ++TGAN GIG    R+L R+ A  V +  RDV +G++A  +++A+  + +    +LD
Sbjct: 27  KVVVITGANTGIGKETARELARRGAR-VYIACRDVLKGESAASEIRADTKNSQVLVRKLD 85

Query: 305 IIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRNVCT 484
           + D +SIRA  +    E   L +L+NNA +     + T    +  L +  N +G   +  
Sbjct: 86  LSDTKSIRAFAEGFLAEEKQLHILINNAGVMMCPYSKTADGFETHLGV--NHLGHFLLTH 143

Query: 485 ELLPLIKPQ--GRVVNVSS 535
            LL  +K     RVVN+SS
Sbjct: 144 LLLERLKESTPARVVNLSS 162


>ref|XP_854127.1| PREDICTED: similar to Retinol dehydrogenase 13 [Canis familiaris]
          Length = 334

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH--QLD 304
           +  +VTGAN GIG     +L R+  G+++L  RD+ + +AA K+++ E L+ R     LD
Sbjct: 39  KTVIVTGANTGIGKQTALELARR-GGNIILACRDMEKCEAAAKEIRGETLNHRVSAWHLD 97

Query: 305 IIDLQSIRALCDFLRKEYGGLDVLVNNAAI--AFQLDNPTPFHIQAELTMKTNFMGTRNV 478
           +  L+SIR     + +E   + +LVNNAA+           F +Q  +    +F+ T N+
Sbjct: 98  LASLKSIREFAAKIIEEEEQVHILVNNAAVMRCPHWTTKDGFEMQFGVNHLGHFLLT-NL 156

Query: 479 CTELLPLIKPQGRVVNVSS 535
             + L    P  R++N+SS
Sbjct: 157 LLDKLKASAP-SRIINLSS 174


>ref|XP_547738.2| PREDICTED: similar to dehydrogenase/reductase (SDR family) member 2
           isoform 2 [Canis familiaris]
          Length = 370

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 39/88 (44%), Positives = 48/88 (54%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQLDII 310
           RVA+VTGA  GIGFAI R L R  A  VV+++R       AV  LQ EGLS       + 
Sbjct: 126 RVAVVTGATDGIGFAIARRLARDGA-HVVVSSRKQHNVDRAVAALQGEGLSVTGTVCHVG 184

Query: 311 DLQSIRALCDFLRKEYGGLDVLVNNAAI 394
             +    L   + + YGGLD LV NAA+
Sbjct: 185 KAEDRERLVATVLEHYGGLDFLVCNAAV 212


>ref|XP_540096.2| PREDICTED: similar to retinol dehydrogenase 14 (all-trans and
           9-cis) isoform 1 [Canis familiaris]
          Length = 336

 Score = 55.5 bits (132), Expect = 6e-08
 Identities = 53/153 (34%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQL-----QAEGLSPR-- 289
           +  L+TGAN G+G A    L R     V++  RD AR + A  QL     QA G  P   
Sbjct: 44  KTVLITGANSGLGRATAAALLR-LGARVIMGCRDRARAEEAAGQLRRELRQAGGREPGSD 102

Query: 290 --------FHQLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQ---LDNPTPFHIQA 436
                     +LD+  L+S+RA C  + +E   LDVL+NNA I FQ   +     F +Q 
Sbjct: 103 VGAAGELVVRELDLASLRSVRAFCQEVLQEEPRLDVLINNAGI-FQCPYMKTEDGFEMQF 161

Query: 437 ELTMKTNFMGTRNVCTELLPLIKPQGRVVNVSS 535
            +    +F+ T N+   LL    P  R+V VSS
Sbjct: 162 GVNHLGHFLLT-NLLLGLLKNSAP-SRIVVVSS 192


  Database: RefSeqCP
    Posted date:  Aug 1, 2006  9:25 PM
  Number of letters in database: 19,266,565
  Number of sequences in database:  33,732
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,037,001
Number of Sequences: 33732
Number of extensions: 956315
Number of successful extensions: 5081
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 4138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5015
length of database: 19,266,565
effective HSP length: 101
effective length of database: 15,859,633
effective search space used: 2474102748
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqHP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-058035
         (773 letters)

Database: RefSeqHP 
           39,411 sequences; 17,774,539 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001748.1| carbonyl reductase 1 [Homo sapiens]                  348   3e-96
Alignment   gi|NP_001227.1| carbonyl reductase 3 [Homo sapiens]                  308   4e-84
Alignment   gi|XP_371503.3| PREDICTED: similar to short-chain dehydrogenase...    58   8e-09
Alignment   gi|XP_947127.1| PREDICTED: similar to short-chain dehydrogenase...    58   8e-09
Alignment   gi|NP_065956.1| retinol dehydrogenase 14 (all-trans and 9-cis) ...    57   2e-08
Alignment   gi|NP_689656.1| retinol dehydrogenase 12 (all-trans and 9-cis) ...    56   4e-08
Alignment   gi|NP_057110.2| androgen-regulated short-chain dehydrogenase/re...    55   6e-08
Alignment   gi|XP_950347.1| PREDICTED: similar to dehydrogenase/reductase (...    54   1e-07
Alignment   gi|NP_932349.1| dehydrogenase/reductase (SDR family) member 4 l...    52   4e-07
Alignment   gi|XP_950350.1| PREDICTED: similar to dehydrogenase/reductase (...    52   4e-07

>ref|NP_001748.1| carbonyl reductase 1 [Homo sapiens]
          Length = 277

 Score =  348 bits (893), Expect = 3e-96
 Identities = 177/218 (81%), Positives = 192/218 (88%)
 Frame = +2

Query: 116 MSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH 295
           MSS   VALVTG NKGIG AIVRDLCR F+GDVVLTARDV RGQAAV+QLQAEGLSPRFH
Sbjct: 1   MSSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFH 60

Query: 296 QLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRN 475
           QLDI DLQSIRAL DFLRKEYGGLDVLVNNA IAF++ +PTPFHIQAE+TMKTNF GTR+
Sbjct: 61  QLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRD 120

Query: 476 VCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELGGLMNKFVEDTK 655
           VCTELLPLIKPQGRVVNVSS   VRAL  CSPELQQKF+SETITEEEL GLMNKFVEDTK
Sbjct: 121 VCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTK 180

Query: 656 NGVHRKEGWXDSTYGLTKIGVSVVVRIYARKLKKPKTG 769
            GVH+KEGW  S YG+TKIGV+V+ RI+ARKL + + G
Sbjct: 181 KGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKG 218


>ref|NP_001227.1| carbonyl reductase 3 [Homo sapiens]
          Length = 277

 Score =  308 bits (788), Expect = 4e-84
 Identities = 152/216 (70%), Positives = 185/216 (85%)
 Frame = +2

Query: 116 MSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH 295
           MSS +RVALVTGAN+GIG AI R+LCRQF+GDVVLTARDVARGQAAV+QLQAEGLSPRFH
Sbjct: 1   MSSCSRVALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFH 60

Query: 296 QLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRN 475
           QLDI DLQSIRAL DFLRKEYGGL+VLVNNAA+AF+ D+P PF I+AE+T+KTNF  TRN
Sbjct: 61  QLDIDDLQSIRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMPFDIKAEMTLKTNFFATRN 120

Query: 476 VCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELGGLMNKFVEDTK 655
           +C ELLP++KP GRVVN+SS + +RA   CS +LQ++F SET+TE +L  LM KFVEDTK
Sbjct: 121 MCNELLPIMKPHGRVVNISSLQCLRAFENCSEDLQERFHSETLTEGDLVDLMKKFVEDTK 180

Query: 656 NGVHRKEGWXDSTYGLTKIGVSVVVRIYARKLKKPK 763
           N VH +EGW +S YG++K+GV+V+ RI AR+L + +
Sbjct: 181 NEVHEREGWPNSPYGVSKLGVTVLSRILARRLDEKR 216


>ref|XP_371503.3| PREDICTED: similar to short-chain dehydrogenase/reductase 1 [Homo
           sapiens]
          Length = 891

 Score = 58.2 bits (139), Expect = 8e-09
 Identities = 40/115 (34%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPR--FHQLD 304
           ++A+VTGAN GIG  + +DL R     V+LT +    GQ A+ ++QA   S R    ++D
Sbjct: 603 KIAIVTGANSGIGKVVSQDLAR-CGAQVILTCQSRECGQQALAEIQAASNSNRLLLGEVD 661

Query: 305 IIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNP-TPFHIQAELTMKTNFMG 466
           +  + SIR+    L +E   + +LVNNA ++  +    TP  +  +LT  TN++G
Sbjct: 662 LSSMTSIRSFARRLLQENPEIHLLVNNAGVSGMIPKTLTPGGL--DLTFVTNYVG 714


>ref|XP_947127.1| PREDICTED: similar to short-chain dehydrogenase/reductase 1 [Homo
           sapiens]
          Length = 916

 Score = 58.2 bits (139), Expect = 8e-09
 Identities = 40/115 (34%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPR--FHQLD 304
           ++A+VTGAN GIG  + +DL R     V+LT +    GQ A+ ++QA   S R    ++D
Sbjct: 628 KIAIVTGANSGIGKVVSQDLAR-CGAQVILTCQSRECGQQALAEIQAASNSNRLLLGEVD 686

Query: 305 IIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNP-TPFHIQAELTMKTNFMG 466
           +  + SIR+    L +E   + +LVNNA ++  +    TP  +  +LT  TN++G
Sbjct: 687 LSSMTSIRSFARRLLQENPEIHLLVNNAGVSGMIPKTLTPGGL--DLTFVTNYVG 739


>ref|NP_065956.1| retinol dehydrogenase 14 (all-trans and 9-cis) [Homo sapiens]
          Length = 336

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 18/153 (11%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAE-------GLSPR 289
           +  L+TGAN G+G A   +L R     V++  RD AR + A  QL+ E       G  P 
Sbjct: 44  KTVLITGANSGLGRATAAELLR-LGARVIMGCRDRARAEEAAGQLRRELRQAAECGPEPG 102

Query: 290 F--------HQLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQ---LDNPTPFHIQA 436
                     +LD+  L+S+RA C  + +E   LDVL+NNA I FQ   +     F +Q 
Sbjct: 103 VSGVGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGI-FQCPYMKTEDGFEMQF 161

Query: 437 ELTMKTNFMGTRNVCTELLPLIKPQGRVVNVSS 535
            +    +F+ T N+   LL    P  R+V VSS
Sbjct: 162 GVNHLGHFLLT-NLLLGLLKSSAP-SRIVVVSS 192


>ref|NP_689656.1| retinol dehydrogenase 12 (all-trans and 9-cis) [Homo sapiens]
          Length = 316

 Score = 55.8 bits (133), Expect = 4e-08
 Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRF--HQLD 304
           +V ++TGAN GIG    R+L  + A  V +  RDV +G++A  +++ +  + +    +LD
Sbjct: 40  KVVVITGANTGIGKETARELASRGAR-VYIACRDVLKGESAASEIRVDTKNSQVLVRKLD 98

Query: 305 IIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRNVCT 484
           + D +SIRA  +    E   L +L+NNA +     + T    +  L +  N +G   +  
Sbjct: 99  LSDTKSIRAFAEGFLAEEKQLHILINNAGVMMCPYSKTADGFETHLGV--NHLGHFLLTY 156

Query: 485 ELLPLIK--PQGRVVNVSS 535
            LL  +K     RVVNVSS
Sbjct: 157 LLLEQLKVSAPARVVNVSS 175


>ref|NP_057110.2| androgen-regulated short-chain dehydrogenase/reductase 1 [Homo
           sapiens]
          Length = 318

 Score = 55.1 bits (131), Expect = 6e-08
 Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRF--HQLD 304
           +V +VTGAN GIG    ++L ++ A  V L  RDV +G+   K++Q    + +    +LD
Sbjct: 42  KVVVVTGANTGIGKETAKELAQRGAR-VYLACRDVEKGELVAKEIQTTTGNQQVLVRKLD 100

Query: 305 IIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQA---ELTMKTNFMGTRN 475
           + D +SIRA       E   L VL+NNA +        P+   A   E+ +  N +G   
Sbjct: 101 LSDTKSIRAFAKGFLAEEKHLHVLINNAGVMM-----CPYSKTADGFEMHIGVNHLGHFL 155

Query: 476 VCTELLPLIKPQ--GRVVNVSS 535
           +   LL  +K     R+VNVSS
Sbjct: 156 LTHLLLEKLKESAPSRIVNVSS 177


>ref|XP_950347.1| PREDICTED: similar to dehydrogenase/reductase (SDR family) member 4
           like 2 isoform 12 [Homo sapiens]
          Length = 186

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 43/123 (34%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQLDII 310
           +VALVT +  GIGFAI R L +  A  VV+++R       AV  LQ EGLS       + 
Sbjct: 31  KVALVTASTDGIGFAIARRLAQDRA-HVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVG 89

Query: 311 DLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNP---TPFHIQAELTMKTNFMGTRNVC 481
             +    L     K +GG+D+LV+NAA+     NP   +   +  E+  K  F G   +C
Sbjct: 90  KAEDRERLVAMAVKLHGGIDILVSNAAV-----NPFFGSLMDVTEEVWDKGWFSGVPGLC 144

Query: 482 TEL 490
           + L
Sbjct: 145 SSL 147


>ref|NP_932349.1| dehydrogenase/reductase (SDR family) member 4 like 2 [Homo sapiens]
          Length = 230

 Score = 52.4 bits (124), Expect = 4e-07
 Identities = 35/88 (39%), Positives = 48/88 (54%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQLDII 310
           +VALVT +  GIGFAI R L +  A  VV+++R       AV  LQ EGLS       + 
Sbjct: 31  KVALVTASTDGIGFAIARRLAQDRA-HVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVG 89

Query: 311 DLQSIRALCDFLRKEYGGLDVLVNNAAI 394
             +    L     K +GG+D+LV+NAA+
Sbjct: 90  KAEDRERLVAMAVKLHGGIDILVSNAAV 117


>ref|XP_950350.1| PREDICTED: similar to dehydrogenase/reductase (SDR family) member 4
           like 2 isoform 14 [Homo sapiens]
          Length = 190

 Score = 52.4 bits (124), Expect = 4e-07
 Identities = 35/88 (39%), Positives = 48/88 (54%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQLDII 310
           +VALVT +  GIGFAI R L +  A  VV+++R       AV  LQ EGLS       + 
Sbjct: 31  KVALVTASTDGIGFAIARRLAQDRA-HVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVG 89

Query: 311 DLQSIRALCDFLRKEYGGLDVLVNNAAI 394
             +    L     K +GG+D+LV+NAA+
Sbjct: 90  KAEDRERLVAMAVKLHGGIDILVSNAAV 117


  Database: RefSeqHP
    Posted date:  Aug 2, 2006 12:57 AM
  Number of letters in database: 17,774,539
  Number of sequences in database:  39,411
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,159,979
Number of Sequences: 39411
Number of extensions: 977458
Number of successful extensions: 5647
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 4381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5566
length of database: 17,774,539
effective HSP length: 100
effective length of database: 13,833,439
effective search space used: 2171849923
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

Search to RefSeqMP

BLASTX 2.2.10 [Oct-19-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20060611S-058035
         (773 letters)

Database: RefSeqMP 
           45,328 sequences; 21,768,885 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_031646.1| carbonyl reductase 1 [Mus musculus]                  316   1e-86
Alignment   gi|NP_766635.1| carbonyl reductase 3 [Mus musculus]                  315   2e-86
Alignment   gi|XP_487442.1| PREDICTED: similar to Carbonyl reductase [NADPH...   310   1e-84
Alignment   gi|XP_989090.1| PREDICTED: similar to Carbonyl reductase [NADPH...   310   1e-84
Alignment   gi|XP_359206.3| PREDICTED: similar to Carbonyl reductase [NADPH...   300   8e-82
Alignment   gi|NP_780581.1| retinol dehydrogenase 13 (all-trans and 9-cis) ...    64   2e-10
Alignment   gi|NP_067532.2| short-chain dehydrogenase/reductase 1 [Mus musc...    60   2e-09
Alignment   gi|NP_076186.1| alcohol dehydrogenase PAN2 [Mus musculus]             59   5e-09
Alignment   gi|NP_084293.1| retinol dehydrogenase 12 [Mus musculus]               57   2e-08
Alignment   gi|NP_001028498.1| dehydrogenase/reductase (SDR family) X chrom...    57   3e-08

>ref|NP_031646.1| carbonyl reductase 1 [Mus musculus]
          Length = 277

 Score =  316 bits (810), Expect = 1e-86
 Identities = 162/216 (75%), Positives = 184/216 (85%)
 Frame = +2

Query: 116 MSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH 295
           MSS+  VALVTGANKGIGFAI RDLCR+F+GDVVL ARD  RGQ AV++LQAEGLSPRFH
Sbjct: 1   MSSSRPVALVTGANKGIGFAITRDLCRKFSGDVVLAARDEERGQTAVQKLQAEGLSPRFH 60

Query: 296 QLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRN 475
           QLDI + QSIRAL DFL KEYGGLDVLVN A IAF++++ TPFHIQAE+TM+TNF GTR+
Sbjct: 61  QLDIDNPQSIRALRDFLLKEYGGLDVLVNKAGIAFKVNDDTPFHIQAEVTMETNFFGTRD 120

Query: 476 VCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELGGLMNKFVEDTK 655
           VC ELLPLIKPQGRVVNVSS   +RAL  C  ELQQKF+SETITEEEL GLMNKFVEDTK
Sbjct: 121 VCKELLPLIKPQGRVVNVSSMVSLRALKNCRLELQQKFRSETITEEELVGLMNKFVEDTK 180

Query: 656 NGVHRKEGWXDSTYGLTKIGVSVVVRIYARKLKKPK 763
            GVH +EGW +S YG+TKIGV+V+ RI ARKL + +
Sbjct: 181 KGVHAEEGWPNSAYGVTKIGVTVLSRILARKLNEQR 216


>ref|NP_766635.1| carbonyl reductase 3 [Mus musculus]
          Length = 277

 Score =  315 bits (808), Expect = 2e-86
 Identities = 155/216 (71%), Positives = 187/216 (86%)
 Frame = +2

Query: 116 MSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH 295
           MSS +RVALVTGANKGIGFAI RDLCR+F+GDVVLTARD ARG+AAV+QLQAEGLSPRFH
Sbjct: 1   MSSCSRVALVTGANKGIGFAITRDLCRKFSGDVVLTARDEARGRAAVQQLQAEGLSPRFH 60

Query: 296 QLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRN 475
           QLDI D QSIRAL DFLRKEYGGL+VLVNNA IAF++D+PTPF IQAE+T+KTNF  TRN
Sbjct: 61  QLDIDDPQSIRALRDFLRKEYGGLNVLVNNAGIAFRMDDPTPFDIQAEVTLKTNFFATRN 120

Query: 476 VCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELGGLMNKFVEDTK 655
           VCTELLP++KP GRVVN+SS +G++AL  C  +LQ+KF+ +T+TE +L  LM KFVEDTK
Sbjct: 121 VCTELLPIMKPHGRVVNISSLQGLKALENCREDLQEKFRCDTLTEVDLVDLMKKFVEDTK 180

Query: 656 NGVHRKEGWXDSTYGLTKIGVSVVVRIYARKLKKPK 763
           N VH +EGW DS YG++K+GV+V+ RI AR+L + +
Sbjct: 181 NEVHEREGWPDSAYGVSKLGVTVLTRILARQLDEKR 216


>ref|XP_487442.1| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
           carbonyl reductase 1) [Mus musculus]
          Length = 277

 Score =  310 bits (793), Expect = 1e-84
 Identities = 157/218 (72%), Positives = 184/218 (84%)
 Frame = +2

Query: 116 MSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH 295
           MS  +RVALVTG NKGIGF I+RDLC++F+GDVVLTARD ARG AAV++LQAEGL+PRFH
Sbjct: 1   MSPCSRVALVTGGNKGIGFEIIRDLCQKFSGDVVLTARDEARGCAAVQKLQAEGLNPRFH 60

Query: 296 QLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRN 475
           QLDI D QSI AL DFL KEY GLDVLVNNA IAF++D+PTPFHI+ E+TMKTNF GTR+
Sbjct: 61  QLDIDDPQSIHALRDFLLKEYKGLDVLVNNAGIAFKVDDPTPFHIKGEVTMKTNFFGTRD 120

Query: 476 VCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELGGLMNKFVEDTK 655
           VC E+LPLIKPQGRVVNVSS   + AL +CSPELQQKF+SETITEEEL GLMNK+VED K
Sbjct: 121 VCKEMLPLIKPQGRVVNVSSMVSLSALKDCSPELQQKFRSETITEEELVGLMNKYVEDAK 180

Query: 656 NGVHRKEGWXDSTYGLTKIGVSVVVRIYARKLKKPKTG 769
            GV+ KE W +S Y ++KIGV+V+ RI ARKL + + G
Sbjct: 181 KGVYVKEDWPNSAYEVSKIGVTVLSRILARKLNEQRRG 218


>ref|XP_989090.1| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
           carbonyl reductase 1) [Mus musculus]
          Length = 277

 Score =  310 bits (793), Expect = 1e-84
 Identities = 157/218 (72%), Positives = 184/218 (84%)
 Frame = +2

Query: 116 MSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH 295
           MS  +RVALVTG NKGIGF I+RDLC++F+GDVVLTARD ARG AAV++LQAEGL+PRFH
Sbjct: 1   MSPCSRVALVTGGNKGIGFEIIRDLCQKFSGDVVLTARDEARGCAAVQKLQAEGLNPRFH 60

Query: 296 QLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRN 475
           QLDI D QSI AL DFL KEY GLDVLVNNA IAF++D+PTPFHI+ E+TMKTNF GTR+
Sbjct: 61  QLDIDDPQSIHALRDFLLKEYKGLDVLVNNAGIAFKVDDPTPFHIKGEVTMKTNFFGTRD 120

Query: 476 VCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELGGLMNKFVEDTK 655
           VC E+LPLIKPQGRVVNVSS   + AL +CSPELQQKF+SETITEEEL GLMNK+VED K
Sbjct: 121 VCKEMLPLIKPQGRVVNVSSMVSLSALKDCSPELQQKFRSETITEEELVGLMNKYVEDAK 180

Query: 656 NGVHRKEGWXDSTYGLTKIGVSVVVRIYARKLKKPKTG 769
            GV+ KE W +S Y ++KIGV+V+ RI ARKL + + G
Sbjct: 181 KGVYVKEDWPNSAYEVSKIGVTVLSRILARKLNEQRRG 218


>ref|XP_359206.3| PREDICTED: similar to Carbonyl reductase [NADPH] 1 (NADPH-dependent
           carbonyl reductase 1) [Mus musculus]
          Length = 277

 Score =  300 bits (769), Expect = 8e-82
 Identities = 157/218 (72%), Positives = 178/218 (81%)
 Frame = +2

Query: 116 MSSNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH 295
           M S +R+ALVTGANKGIGFAI RDLC+QF+GDVVLTARD ARG AAV++LQAEGL PRFH
Sbjct: 1   MPSCSRIALVTGANKGIGFAITRDLCQQFSGDVVLTARDEARGLAAVQKLQAEGLIPRFH 60

Query: 296 QLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRN 475
           QLDI D QSI AL +FL KEYGGLDVLVNNA IA++  + T FHI  E  MKTNF GT+ 
Sbjct: 61  QLDINDPQSIHALRNFLLKEYGGLDVLVNNAGIAYKGTDLTHFHILREAAMKTNFFGTQA 120

Query: 476 VCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELGGLMNKFVEDTK 655
           VCTELLPLIK QGRVVN+SS   + AL  CS ELQQKF+SETITEEEL GLMNKFVEDTK
Sbjct: 121 VCTELLPLIKTQGRVVNISSLISLEALKNCSLELQQKFRSETITEEELVGLMNKFVEDTK 180

Query: 656 NGVHRKEGWXDSTYGLTKIGVSVVVRIYARKLKKPKTG 769
            GVH KEGW +S YG++KIGV+V+ RI ARKL + + G
Sbjct: 181 KGVHAKEGWPNSAYGVSKIGVTVLSRILARKLNEQRRG 218


>ref|NP_780581.1| retinol dehydrogenase 13 (all-trans and 9-cis) [Mus musculus]
          Length = 334

 Score = 63.5 bits (153), Expect = 2e-10
 Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH--QLD 304
           +  +VTGAN GIG     +L ++  G+V+L  RD+ + + A K ++ E L+PR    +LD
Sbjct: 39  KTVIVTGANTGIGKQTALELAKR-GGNVILACRDMEKCEVAAKDIRGETLNPRVRAERLD 97

Query: 305 IIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRNVCT 484
           +  L+SIR     + KE   +D+LVNNAA+       T      E+    N++G   +  
Sbjct: 98  LASLKSIREFARKVIKEEERVDILVNNAAVMRCPHWTTEDGF--EMQFGVNYLGHFLLTN 155

Query: 485 ELLPLIKPQ--GRVVNVSS 535
            LL  +K     R++N+SS
Sbjct: 156 LLLDKLKASAPSRIINLSS 174


>ref|NP_067532.2| short-chain dehydrogenase/reductase 1 [Mus musculus]
          Length = 316

 Score = 60.1 bits (144), Expect = 2e-09
 Identities = 54/143 (37%), Positives = 79/143 (55%), Gaps = 8/143 (5%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQA-EGLSPRF-HQLD 304
           +VA+VTGAN GIG    +DL ++ A  V L  RDV +G+ A +++QA  G S  F  +LD
Sbjct: 39  KVAIVTGANTGIGKETAKDLAQRGA-RVYLACRDVDKGELAAREIQAVTGNSQVFVRKLD 97

Query: 305 IIDLQSIRALC-DFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQA---ELTMKTNFMGTR 472
           + D +SIRA   DFL +E   L +L+NNA +        P+   A   E+ +  N +G  
Sbjct: 98  LADTKSIRAFAKDFLAEE-KHLHLLINNAGVMM-----CPYSKTADGFEMHIGVNHLGHF 151

Query: 473 NVCTELLPLIKPQ--GRVVNVSS 535
            +   LL  +K     R+VN+SS
Sbjct: 152 LLTHLLLEKLKESAPSRIVNLSS 174


>ref|NP_076186.1| alcohol dehydrogenase PAN2 [Mus musculus]
          Length = 334

 Score = 58.9 bits (141), Expect = 5e-09
 Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQL-----QAEGLSPR-- 289
           +  L+TGAN G+G A   +L R     V++  RD AR + A  QL     QA G  P   
Sbjct: 45  KTVLITGANSGLGRATAAELLR-LGARVIMGCRDRARAEEAAGQLRQELCQAGGAGPDGT 103

Query: 290 -----FHQLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKT 454
                  +LD+  L+S+RA C  L +E   LDVL+NNA + F     T      E+    
Sbjct: 104 DGQLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNAGV-FHCPY-TKTEDGFEMQFGV 161

Query: 455 NFMGTRNVCTELLPLIKPQ--GRVVNVSS 535
           N +G   +   LL L+K     R+V VSS
Sbjct: 162 NHLGHFLLTNLLLGLLKSSAPSRIVVVSS 190


>ref|NP_084293.1| retinol dehydrogenase 12 [Mus musculus]
          Length = 316

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRF--HQLD 304
           +V ++TGAN GIG    R+L R+ A  V +  RDV +G++A  +++A+  + +    +LD
Sbjct: 40  KVVVITGANTGIGKETARELARRGAR-VYIACRDVLKGESAASEIRADTKNSQVLVRKLD 98

Query: 305 IIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRNVCT 484
           + D +SIRA  +    E   L +L+NNA +     + T    +    +  N +G   +  
Sbjct: 99  LSDTKSIRAFAERFLAEEKKLHILINNAGVMMCPYSKTTDGFETHFGV--NHLGHFLLTY 156

Query: 485 ELLPLIKPQ--GRVVNVSS 535
            LL  +K     RVVN+SS
Sbjct: 157 LLLERLKESAPARVVNLSS 175


>ref|NP_001028498.1| dehydrogenase/reductase (SDR family) X chromosome [Mus musculus]
          Length = 335

 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 50/143 (34%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
 Frame = +2

Query: 131 RVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFH--QLD 304
           RVA+VTGA  GIG +  R L R     VV+   D  RGQ  V  ++AE  S R H   LD
Sbjct: 44  RVAIVTGATAGIGRSTARQLAR-LGMCVVVAGNDEHRGQEVVSSIRAEMGSDRAHFLPLD 102

Query: 305 IIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMGTRNVCT 484
           +  L S+R      +     L +LVNNA +  +    T    +  L +  NF+G   +  
Sbjct: 103 LASLASVRGFARDFQALGLPLHLLVNNAGVMLEPRAETEDGFERHLGV--NFLGHFLLTL 160

Query: 485 ELLPLIKPQG------RVVNVSS 535
            LLP ++  G      RVV V S
Sbjct: 161 LLLPALRASGAEGRGSRVVTVGS 183


  Database: RefSeqMP
    Posted date:  Aug 2, 2006 12:58 AM
  Number of letters in database: 21,768,885
  Number of sequences in database:  45,328
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,322,020
Number of Sequences: 45328
Number of extensions: 1109606
Number of successful extensions: 5948
Number of sequences better than 1.0e-05: 10
Number of HSP's better than  0.0 without gapping: 4810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5883
length of database: 21,768,885
effective HSP length: 101
effective length of database: 17,190,757
effective search space used: 2681758092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)