Search to RefSeqBP_Rel44
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20070806C-000999
(1128 letters)
Database: RefSeq44_BP.fasta
33,615 sequences; 18,071,151 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001071354.1| thioredoxin-like protein 1 [Bos taurus]. 527 e-150
Alignment gi|NP_776393.1| thioredoxin [Bos taurus]. 87 3e-17
Alignment gi|NP_001071628.1| thioredoxin domain-containing protein 8 [Bos... 79 6e-15
Alignment gi|NP_001030273.1| glutaredoxin-3 [Bos taurus]. 59 1e-08
Alignment gi|NP_001092360.1| chromosome 1 open reading frame 128 [Bos tau... 54 2e-07
>ref|NP_001071354.1| thioredoxin-like protein 1 [Bos taurus].
Length = 289
Score = 527 bits (1358), Expect = e-150
Identities = 263/282 (93%), Positives = 268/282 (95%), Gaps = 2/282 (0%)
Frame = +1
Query: 289 MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD 468
MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD
Sbjct: 1 MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD 60
Query: 469 VHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPGSNEDTDIP 648
VHQCQGTAATN ISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPGSNEDTDIP
Sbjct: 61 VHQCQGTAATNKISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPGSNEDTDIP 120
Query: 649 KGYMDLMPFINKAGCECLNESDEHGFDNCLRKDMTFLESDCDEQLLITVAFNQPVKLYSM 828
KGYMDLMPFINKAGCECLNESDEHGFDNCLRKDMTFLESDCDEQLLITVAFNQPVKLYSM
Sbjct: 121 KGYMDLMPFINKAGCECLNESDEHGFDNCLRKDMTFLESDCDEQLLITVAFNQPVKLYSM 180
Query: 829 KFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQN 1008
KFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQN
Sbjct: 181 KFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQN 240
Query: 1009 VNSVTIFVQSNQVKKKPQNFIFYFYWDSGP--GTNMNDFQRV 1128
VNSVTIFVQSNQ +++ I YF + P TNMNDF+RV
Sbjct: 241 VNSVTIFVQSNQGEEETTR-ISYFTFIGTPVQATNMNDFKRV 281
>ref|NP_776393.1| thioredoxin [Bos taurus].
Length = 105
Score = 87.0 bits (214), Expect = 3e-17
Identities = 44/102 (43%), Positives = 57/102 (55%)
Frame = +1
Query: 298 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQ 477
VK + S FQ L+ AG +L VV F+ CGPC I P F S+S KY VFLEVDV
Sbjct: 2 VKQIESKYAFQEALNSAGEKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDD 61
Query: 478 CQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQ 603
CQ AA + PTF FF+ ++ ++ GA+ LE I +
Sbjct: 62 CQDVAAECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
>ref|NP_001071628.1| thioredoxin domain-containing protein 8 [Bos taurus].
Length = 105
Score = 79.3 bits (194), Expect = 6e-15
Identities = 39/91 (42%), Positives = 56/91 (61%)
Frame = +1
Query: 337 LSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISAT 516
L AG++L V++F+ + CGPC RI P F +MS +Y +F VDV + A T +I A
Sbjct: 15 LKAAGNKLVVIEFSAKWCGPCKRIYPVFHAMSVQYRSVMFANVDVDNARELAQTYHIKAV 74
Query: 517 PTFLFFRNKVRIDQYQGADAVGLEEKIKQHL 609
PTF F+ +I + GADA LEEKI++ +
Sbjct: 75 PTFQLFKQTKKIFELCGADAKKLEEKIREFM 105
>ref|NP_001030273.1| glutaredoxin-3 [Bos taurus].
Length = 334
Score = 58.5 bits (140), Expect = 1e-08
Identities = 34/123 (27%), Positives = 59/123 (47%)
Frame = +1
Query: 298 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQ 477
V VGS F+ L L VV F C ++ + ++ ++ Q F++++
Sbjct: 12 VVEVGSSGQFEELLRLRAKSLLVVHFWAPWAPQCAQMNDVMAELAKEHQQVSFVKLEAEA 71
Query: 478 CQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPGSNEDTDIPKGY 657
+ IS+ PTFLFF+N +ID+ GA A L +K+++H + S ++ PK
Sbjct: 72 VPEVSEKYEISSVPTFLFFKNSQKIDRLDGAHAPELTKKVQRHASSGSFSPSGSEHPKED 131
Query: 658 MDL 666
+ L
Sbjct: 132 LSL 134
>ref|NP_001092360.1| chromosome 1 open reading frame 128 [Bos taurus].
Length = 211
Score = 54.3 bits (129), Expect = 2e-07
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Frame = +1
Query: 694 ECLNESDEHGFDNCL-----RKDMT-FLESDCDEQLLITVAFNQPVKLYSMKFQGPDNGQ 855
+CLNES E R D + F+ESD DE+LL + F VKL + G D+
Sbjct: 41 QCLNESREGSGRGVFKPWEERTDRSKFVESDADEELLFNIPFTGNVKLKGIIIMGEDDDS 100
Query: 856 GPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQNVNSVTIFVQ 1035
P ++++ N+P+ M F++ +R EP Q L D+ + + +F NV ++I +
Sbjct: 101 HPSEMRLYKNIPQ-MSFDDTDR-EPDQTFSLNR-DLTGELEYATKISRFSNVYHLSIHIS 157
Query: 1036 SN 1041
N
Sbjct: 158 KN 159
Database: RefSeq44_BP.fasta
Posted date: Nov 15, 2010 4:36 PM
Number of letters in database: 18,071,151
Number of sequences in database: 33,615
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33615
Number of Hits to DB: 37,619,483
Number of extensions: 913114
Number of successful extensions: 3018
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 3007
Number of HSP's successfully gapped: 5
Length of query: 376
Length of database: 18,071,151
Length adjustment: 104
Effective length of query: 272
Effective length of database: 14,575,191
Effective search space: 3964451952
Effective search space used: 3964451952
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqCP_Rel44
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20070806C-000999
(1128 letters)
Database: RefSeq44_CP.fasta
33,359 sequences; 18,921,627 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_541090.2| PREDICTED: similar to Thioredoxin-like protein ... 478 e-135
Alignment gi|XP_532029.2| PREDICTED: similar to Thioredoxin (ATL-derived ... 83 4e-16
Alignment gi|XP_547674.2| PREDICTED: similar to Thioredoxin domain contai... 74 3e-13
Alignment gi|XP_535061.2| PREDICTED: similar to Thioredoxin-like 2 protei... 63 5e-10
Alignment gi|XP_855140.1| PREDICTED: similar to thioredoxin family Trp26 ... 54 2e-07
>ref|XP_541090.2| PREDICTED: similar to Thioredoxin-like protein 1 (32 kDa
thioredoxin-related protein) [Canis familiaris].
Length = 267
Score = 478 bits (1229), Expect = e-135
Identities = 237/256 (92%), Positives = 243/256 (94%), Gaps = 2/256 (0%)
Frame = +1
Query: 364 VVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISATPTFLFFRNK 543
+VKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISATPTFLFFRNK
Sbjct: 1 MVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISATPTFLFFRNK 60
Query: 544 VRIDQYQGADAVGLEEKIKQHLENDPGSNEDTDIPKGYMDLMPFINKAGCECLNESDEHG 723
VRIDQYQGADAVGLEEKIKQHLENDPGSNEDTDIPKGYMDLMPFINKAGCECLNESDEHG
Sbjct: 61 VRIDQYQGADAVGLEEKIKQHLENDPGSNEDTDIPKGYMDLMPFINKAGCECLNESDEHG 120
Query: 724 FDNCLRKDMTFLESDCDEQLLITVAFNQPVKLYSMKFQGPDNGQGPKYVKIFINLPRSMD 903
FDNCLRKDMTFLESDCDEQLLITVAFNQPVKLYSMKFQGPDNGQGPKYVKIFINLPRSMD
Sbjct: 121 FDNCLRKDMTFLESDCDEQLLITVAFNQPVKLYSMKFQGPDNGQGPKYVKIFINLPRSMD 180
Query: 904 FEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQNVNSVTIFVQSNQVKKKPQNFIFYFY 1083
FEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQNVNSVTIFVQSNQ +++ I YF
Sbjct: 181 FEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQNVNSVTIFVQSNQGEEETTR-ISYFT 239
Query: 1084 WDSGP--GTNMNDFQR 1125
+ P TNMNDF+R
Sbjct: 240 FIGTPVQATNMNDFKR 255
>ref|XP_532029.2| PREDICTED: similar to Thioredoxin (ATL-derived factor) (ADF)
(Surface associated sulphydryl protein) (SASP) [Canis
familiaris].
Length = 219
Score = 83.2 bits (204), Expect = 4e-16
Identities = 40/93 (43%), Positives = 53/93 (56%)
Frame = +1
Query: 325 FQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNN 504
FQ L+ AG +L VV F+ CGPC I P F S+S KY VFLEVDV CQ A+
Sbjct: 125 FQEALNSAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVASECE 184
Query: 505 ISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQ 603
+ PTF FF+ ++ ++ GA+ LE I +
Sbjct: 185 VKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 217
>ref|XP_547674.2| PREDICTED: similar to Thioredoxin domain containing protein 2
(Spermatid-specific thioredoxin-1) (Sptrx-1) [Canis
familiaris].
Length = 468
Score = 73.9 bits (180), Expect = 3e-13
Identities = 39/102 (38%), Positives = 54/102 (52%)
Frame = +1
Query: 298 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQ 477
VK + + DF+ L AG RL V F+ CGPC I P F S+S KY VFLEVD +
Sbjct: 365 VKVILNKEDFELALKEAGERLVAVDFSATWCGPCRTIKPLFRSLSLKYEDVVFLEVDADE 424
Query: 478 CQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQ 603
C+ I PTF F++ + ++ ++ GA LE I +
Sbjct: 425 CEELVKDLEIICIPTFQFYKQEEKVGEFCGAVKEKLEAIIAE 466
>ref|XP_535061.2| PREDICTED: similar to Thioredoxin-like 2 protein (PKC-interacting
cousin of thioredoxin) (PKCq-interacting protein)
(PKC-theta-interacting protein) [Canis familiaris].
Length = 333
Score = 63.2 bits (152), Expect = 5e-10
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Frame = +1
Query: 277 GSLRMVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVF 456
G+ V VGS P F+ L L VV F C+++ + ++ ++PQ F
Sbjct: 4 GAAEAAAVVEVGSAPQFEELLRLRAKSLVVVHFWAPWAPQCVQMNDVMAELAKEHPQVSF 63
Query: 457 LEVDVHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLEN---DPGS 627
++++ + IS+ PTFL F+N +ID+ GA A L +K+++H + P +
Sbjct: 64 VKLEAEAVPEVSEKYEISSVPTFLLFKNSQKIDRLDGAHAPELTKKVQRHASSGSFPPST 123
Query: 628 NE 633
NE
Sbjct: 124 NE 125
>ref|XP_855140.1| PREDICTED: similar to thioredoxin family Trp26 [Canis familiaris].
Length = 311
Score = 54.3 bits (129), Expect = 2e-07
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Frame = +1
Query: 694 ECLNESDEHGFDNCL-----RKDMT-FLESDCDEQLLITVAFNQPVKLYSMKFQGPDNGQ 855
+CLNES E R D + F+ESD DE+LL + F VKL + G D+
Sbjct: 141 QCLNESREGSGRGVFKPWEERTDRSKFVESDADEELLFNIPFTGNVKLKGIIIMGEDDDS 200
Query: 856 GPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQNVNSVTIFVQ 1035
P ++++ N+P+ M F++ +R EP Q L D+ + + +F NV ++I +
Sbjct: 201 HPSEMRLYKNIPQ-MSFDDTDR-EPDQTFSLNR-DLTGELEYATKISRFSNVYHLSIHIS 257
Query: 1036 SN 1041
N
Sbjct: 258 KN 259
Database: RefSeq44_CP.fasta
Posted date: Nov 15, 2010 4:36 PM
Number of letters in database: 18,921,627
Number of sequences in database: 33,359
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33359
Number of Hits to DB: 38,409,689
Number of extensions: 920787
Number of successful extensions: 3002
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 2983
Number of HSP's successfully gapped: 5
Length of query: 376
Length of database: 18,921,627
Length adjustment: 104
Effective length of query: 272
Effective length of database: 15,452,291
Effective search space: 4203023152
Effective search space used: 4203023152
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqHP_Rel44
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20070806C-000999
(1128 letters)
Database: RefSeq44_HP.fasta
33,950 sequences; 18,324,212 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_004777.1| thioredoxin-like protein 1 [Homo sapiens]. 527 e-150
Alignment gi|NP_003320.2| thioredoxin [Homo sapiens]. 86 6e-17
Alignment gi|NP_115619.4| thioredoxin domain-containing protein 2 isoform... 74 2e-13
Alignment gi|NP_001091999.1| thioredoxin domain-containing protein 2 isof... 74 2e-13
Alignment gi|NP_001003936.1| thioredoxin domain-containing protein 8 [Hom... 65 1e-10
Alignment gi|NP_006532.2| glutaredoxin-3 [Homo sapiens]. 59 8e-09
Alignment gi|NP_065095.2| chromosome 1 open reading frame 128 [Homo sapie... 55 9e-08
Alignment gi|NP_110437.2| thioredoxin domain-containing protein 5 isoform... 50 5e-06
Alignment gi|NP_001139021.1| thioredoxin domain-containing protein 5 isof... 50 5e-06
>ref|NP_004777.1| thioredoxin-like protein 1 [Homo sapiens].
Length = 289
Score = 527 bits (1358), Expect = e-150
Identities = 263/282 (93%), Positives = 268/282 (95%), Gaps = 2/282 (0%)
Frame = +1
Query: 289 MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD 468
MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD
Sbjct: 1 MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD 60
Query: 469 VHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPGSNEDTDIP 648
VHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPGSNEDTDIP
Sbjct: 61 VHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPGSNEDTDIP 120
Query: 649 KGYMDLMPFINKAGCECLNESDEHGFDNCLRKDMTFLESDCDEQLLITVAFNQPVKLYSM 828
KGYMDLMPFINKAGCECLNESDEHGFDNCLRKD TFLESDCDEQLLITVAFNQPVKLYSM
Sbjct: 121 KGYMDLMPFINKAGCECLNESDEHGFDNCLRKDTTFLESDCDEQLLITVAFNQPVKLYSM 180
Query: 829 KFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQN 1008
KFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQN
Sbjct: 181 KFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQN 240
Query: 1009 VNSVTIFVQSNQVKKKPQNFIFYFYWDSGP--GTNMNDFQRV 1128
VNSVTIFVQSNQ +++ I YF + P TNMNDF+RV
Sbjct: 241 VNSVTIFVQSNQGEEETTR-ISYFTFIGTPVQATNMNDFKRV 281
>ref|NP_003320.2| thioredoxin [Homo sapiens].
Length = 105
Score = 85.9 bits (211), Expect = 6e-17
Identities = 42/102 (41%), Positives = 56/102 (54%)
Frame = +1
Query: 298 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQ 477
VK + S FQ L AG +L VV F+ CGPC I P F S+S KY +FLEVDV
Sbjct: 2 VKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDD 61
Query: 478 CQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQ 603
CQ A+ + PTF FF+ ++ ++ GA+ LE I +
Sbjct: 62 CQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
>ref|NP_115619.4| thioredoxin domain-containing protein 2 isoform 1 [Homo sapiens].
Length = 486
Score = 73.9 bits (180), Expect = 2e-13
Identities = 39/101 (38%), Positives = 55/101 (54%)
Frame = +1
Query: 298 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQ 477
VK + S DF+ L AG RL V F+ CGPC I P F ++S K+ VFLEVD
Sbjct: 383 VKVILSKEDFEASLKEAGERLVAVDFSATWCGPCRTIRPFFHALSVKHEDVVFLEVDADN 442
Query: 478 CQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIK 600
C+ I PTF F++ + ++D+ GA L+EK++
Sbjct: 443 CEEVVRECAIMCVPTFQFYKKEEKVDELCGA----LKEKLE 479
>ref|NP_001091999.1| thioredoxin domain-containing protein 2 isoform 2 [Homo sapiens].
Length = 553
Score = 73.9 bits (180), Expect = 2e-13
Identities = 39/101 (38%), Positives = 55/101 (54%)
Frame = +1
Query: 298 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQ 477
VK + S DF+ L AG RL V F+ CGPC I P F ++S K+ VFLEVD
Sbjct: 450 VKVILSKEDFEASLKEAGERLVAVDFSATWCGPCRTIRPFFHALSVKHEDVVFLEVDADN 509
Query: 478 CQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIK 600
C+ I PTF F++ + ++D+ GA L+EK++
Sbjct: 510 CEEVVRECAIMCVPTFQFYKKEEKVDELCGA----LKEKLE 546
>ref|NP_001003936.1| thioredoxin domain-containing protein 8 [Homo sapiens].
Length = 115
Score = 65.1 bits (157), Expect = 1e-10
Identities = 31/77 (40%), Positives = 45/77 (58%)
Frame = +1
Query: 322 DFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATN 501
+F+ L+ AG +LAVV+F+ + CGPC R+ P F +MS KY F VDV+ A T
Sbjct: 10 EFKTFLTAAGHKLAVVQFSSKRCGPCKRMFPVFHAMSVKYQNVFFANVDVNNSPELAETC 69
Query: 502 NISATPTFLFFRNKVRI 552
+I PTF F+ ++
Sbjct: 70 HIKTIPTFQMFKKSQKV 86
>ref|NP_006532.2| glutaredoxin-3 [Homo sapiens].
Length = 335
Score = 58.9 bits (141), Expect = 8e-09
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = +1
Query: 289 MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD 468
+ V+ VGS F+ L L VV F C ++ + ++ + PQ F++++
Sbjct: 10 VAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLE 69
Query: 469 VHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLEND---PGSNE 633
+ IS+ PTFLFF+N +ID+ GA A L +K+++H + P +NE
Sbjct: 70 AEGVPEVSEKYEISSVPTFLFFKNSQKIDRLDGAHAPELTKKVQRHASSGSFLPSANE 127
>ref|NP_065095.2| chromosome 1 open reading frame 128 [Homo sapiens].
Length = 211
Score = 55.5 bits (132), Expect = 9e-08
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Frame = +1
Query: 694 ECLNESDEHGFDNCL-----RKDMT-FLESDCDEQLLITVAFNQPVKLYSMKFQGPDNGQ 855
+CLNES E R D + F+ESD DE+LL + F VKL + G D+
Sbjct: 41 QCLNESREGSGRGVFKPWEERTDRSKFVESDADEELLFNIPFTGNVKLKGIIIMGEDDDS 100
Query: 856 GPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQNVNSVTIFVQ 1035
P ++++ N+P+ M F++ ER EP Q L D+ + + +F NV ++I +
Sbjct: 101 HPSEMRLYKNIPQ-MSFDDTER-EPDQTFSLNR-DLTGELEYATKISRFSNVYHLSIHIS 157
Query: 1036 SN 1041
N
Sbjct: 158 KN 159
>ref|NP_110437.2| thioredoxin domain-containing protein 5 isoform 1 precursor [Homo
sapiens].
Length = 432
Score = 49.7 bits (117), Expect = 5e-06
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 23/183 (12%)
Frame = +1
Query: 283 LRMVGVKPVGSDPDFQP-----------ELSGAGSRLAV------VKFTMRGCGPCLRIA 411
L+ + +PV +P+ +P ELS + L V +KF CG C +A
Sbjct: 165 LQTLNEEPVTPEPEVEPPSAPELKQGLYELSASNFELHVAQGDHFIKFFAPWCGHCKALA 224
Query: 412 PAFSSMSN--KYPQAVFL-EVDVHQCQGTAATNNISATPTFLFFRNKVRIDQYQG-ADAV 579
P + ++ ++ + V + +VD Q + N + PT L+FR+ ++DQY+G D
Sbjct: 225 PTWEQLALGLEHSETVKIGKVDCTQHYELCSGNQVRGYPTLLWFRDGKKVDQYKGKRDLE 284
Query: 580 GLEEKIKQHLENDPGSNEDTDIPK--GYMDLMPFINKAGCECLNESDEHGFDNCLRKDMT 753
L E ++ L+ +T P + P +K L E++ FD+ + + +T
Sbjct: 285 SLREYVESQLQRTETGATETVTPSEAPVLAAEPEADKGTVLALTENN---FDDTIAEGIT 341
Query: 754 FLE 762
F++
Sbjct: 342 FIK 344
>ref|NP_001139021.1| thioredoxin domain-containing protein 5 isoform 3 [Homo sapiens].
Length = 324
Score = 49.7 bits (117), Expect = 5e-06
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 23/183 (12%)
Frame = +1
Query: 283 LRMVGVKPVGSDPDFQP-----------ELSGAGSRLAV------VKFTMRGCGPCLRIA 411
L+ + +PV +P+ +P ELS + L V +KF CG C +A
Sbjct: 57 LQTLNEEPVTPEPEVEPPSAPELKQGLYELSASNFELHVAQGDHFIKFFAPWCGHCKALA 116
Query: 412 PAFSSMSN--KYPQAVFL-EVDVHQCQGTAATNNISATPTFLFFRNKVRIDQYQG-ADAV 579
P + ++ ++ + V + +VD Q + N + PT L+FR+ ++DQY+G D
Sbjct: 117 PTWEQLALGLEHSETVKIGKVDCTQHYELCSGNQVRGYPTLLWFRDGKKVDQYKGKRDLE 176
Query: 580 GLEEKIKQHLENDPGSNEDTDIPK--GYMDLMPFINKAGCECLNESDEHGFDNCLRKDMT 753
L E ++ L+ +T P + P +K L E++ FD+ + + +T
Sbjct: 177 SLREYVESQLQRTETGATETVTPSEAPVLAAEPEADKGTVLALTENN---FDDTIAEGIT 233
Query: 754 FLE 762
F++
Sbjct: 234 FIK 236
Database: RefSeq44_HP.fasta
Posted date: Nov 15, 2010 4:36 PM
Number of letters in database: 18,324,212
Number of sequences in database: 33,950
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33950
Number of Hits to DB: 37,965,497
Number of extensions: 918441
Number of successful extensions: 2888
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 2876
Number of HSP's successfully gapped: 9
Length of query: 376
Length of database: 18,324,212
Length adjustment: 104
Effective length of query: 272
Effective length of database: 14,793,412
Effective search space: 4023808064
Effective search space used: 4023808064
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqMP_Rel44
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20070806C-000999
(1128 letters)
Database: RefSeq44_MP.fasta
29,866 sequences; 15,452,059 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_058072.2| thioredoxin-like protein 1 [Mus musculus]. 525 e-149
Alignment gi|NP_035790.1| thioredoxin [Mus musculus]. 85 9e-17
Alignment gi|NP_001139474.1| thioredoxin domain-containing protein 2 isof... 72 1e-12
Alignment gi|NP_705739.2| thioredoxin domain-containing protein 2 isoform... 72 1e-12
Alignment gi|NP_080408.2| thioredoxin domain-containing protein 8 [Mus mu... 65 7e-11
Alignment gi|NP_075629.2| glutaredoxin-3 [Mus musculus]. 59 5e-09
Alignment gi|NP_079687.3| thioredoxin family Trp26 [Mus musculus]. 56 4e-08
>ref|NP_058072.2| thioredoxin-like protein 1 [Mus musculus].
Length = 289
Score = 525 bits (1353), Expect = e-149
Identities = 261/282 (92%), Positives = 268/282 (95%), Gaps = 2/282 (0%)
Frame = +1
Query: 289 MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD 468
MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD
Sbjct: 1 MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD 60
Query: 469 VHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPGSNEDTDIP 648
VHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPGSNED DIP
Sbjct: 61 VHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPGSNEDADIP 120
Query: 649 KGYMDLMPFINKAGCECLNESDEHGFDNCLRKDMTFLESDCDEQLLITVAFNQPVKLYSM 828
KGYMDLMPFINKAGCECLNESDEHGFDNCLRKDM+FLESDCDEQLLITVAFNQPVKLYSM
Sbjct: 121 KGYMDLMPFINKAGCECLNESDEHGFDNCLRKDMSFLESDCDEQLLITVAFNQPVKLYSM 180
Query: 829 KFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQN 1008
KFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQN
Sbjct: 181 KFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQN 240
Query: 1009 VNSVTIFVQSNQVKKKPQNFIFYFYWDSGP--GTNMNDFQRV 1128
VNSVT+FVQSNQ +++ I YF + P TNMNDF+RV
Sbjct: 241 VNSVTLFVQSNQGEEETTR-ISYFTFIGTPVQATNMNDFKRV 281
>ref|NP_035790.1| thioredoxin [Mus musculus].
Length = 105
Score = 85.1 bits (209), Expect = 9e-17
Identities = 42/103 (40%), Positives = 58/103 (56%)
Frame = +1
Query: 298 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQ 477
VK + S FQ L+ AG +L VV F+ CGPC I P F S+ +KY VFLEVDV
Sbjct: 2 VKLIESKEAFQEALAAAGDKLVVVDFSATWCGPCKMIKPFFHSLCDKYSNVVFLEVDVDD 61
Query: 478 CQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQH 606
CQ AA + PTF F++ ++ ++ GA+ LE I ++
Sbjct: 62 CQDVAADCEVKCMPTFQFYKKGQKVGEFSGANKEKLEASITEY 104
>ref|NP_001139474.1| thioredoxin domain-containing protein 2 isoform 1 [Mus musculus].
Length = 550
Score = 71.6 bits (174), Expect = 1e-12
Identities = 34/102 (33%), Positives = 53/102 (51%)
Frame = +1
Query: 298 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQ 477
V+ + +F+ L AG +L V F+ CGPC + P F S+S K+ +FLEVD
Sbjct: 447 VRVIKDKEEFEEVLKDAGEKLVAVDFSAAWCGPCRMMKPLFHSLSLKHEDVIFLEVDTED 506
Query: 478 CQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQ 603
C+ I PTF F++N+ ++ ++ GA LE I +
Sbjct: 507 CEQLVQDCEIFHLPTFQFYKNEEKVGEFSGALVGKLERSISE 548
>ref|NP_705739.2| thioredoxin domain-containing protein 2 isoform 2 [Mus musculus].
Length = 543
Score = 71.6 bits (174), Expect = 1e-12
Identities = 34/102 (33%), Positives = 53/102 (51%)
Frame = +1
Query: 298 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQ 477
V+ + +F+ L AG +L V F+ CGPC + P F S+S K+ +FLEVD
Sbjct: 440 VRVIKDKEEFEEVLKDAGEKLVAVDFSAAWCGPCRMMKPLFHSLSLKHEDVIFLEVDTED 499
Query: 478 CQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQ 603
C+ I PTF F++N+ ++ ++ GA LE I +
Sbjct: 500 CEQLVQDCEIFHLPTFQFYKNEEKVGEFSGALVGKLERSISE 541
>ref|NP_080408.2| thioredoxin domain-containing protein 8 [Mus musculus].
Length = 153
Score = 65.5 bits (158), Expect = 7e-11
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 22/130 (16%)
Frame = +1
Query: 280 SLRMVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFL 459
S ++ VK + + + + S AG++L VV+F+ + CGPC IAP F +MS KY F
Sbjct: 22 SQMLIMVKRIKNMSELKELFSDAGNKLVVVEFSAKWCGPCKTIAPVFQAMSLKYQNVTFA 81
Query: 460 EVDVHQCQGTAATNNISATPTFLFFRNKVRIDQY----------------------QGAD 573
+VDV + A +I+ PTF F+ ++ + GAD
Sbjct: 82 QVDVDSSKELAEHCDITMLPTFQMFKYTQKVTPFSRLKRVLCCLRSGPKSKMIFECHGAD 141
Query: 574 AVGLEEKIKQ 603
A LE+KI++
Sbjct: 142 AKQLEKKIQE 151
>ref|NP_075629.2| glutaredoxin-3 [Mus musculus].
Length = 337
Score = 59.3 bits (142), Expect = 5e-09
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Frame = +1
Query: 292 VGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDV 471
V V VGS F+ L L VV F C+++ + ++ ++P F++++
Sbjct: 13 VAVVEVGSAQQFEELLRLKTKSLLVVHFWAPWAPQCVQMNDVMAELAKEHPHVSFVKLEA 72
Query: 472 HQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLEN---DPGSNE 633
+ IS+ PTFLFF+N ++D+ GA A L +K+++H+ + P +NE
Sbjct: 73 EAVPEVSEKYEISSVPTFLFFKNSQKVDRLDGAHAPELTKKVQRHVSSGAFPPSTNE 129
>ref|NP_079687.3| thioredoxin family Trp26 [Mus musculus].
Length = 211
Score = 56.2 bits (134), Expect = 4e-08
Identities = 40/122 (32%), Positives = 61/122 (50%), Gaps = 6/122 (4%)
Frame = +1
Query: 694 ECLNESDEHGFDNCL-----RKDMT-FLESDCDEQLLITVAFNQPVKLYSMKFQGPDNGQ 855
+CLNES E R D + F+ESD DE+LL + F VKL + G D+
Sbjct: 41 QCLNESREGSGRGVFKPWEERTDRSKFVESDADEELLFNIPFTGNVKLKGVIIMGEDDDS 100
Query: 856 GPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQNVNSVTIFVQ 1035
P ++++ N+P+ M F++ ER EP Q L DI + + +F NV ++I +
Sbjct: 101 HPSEMRLYKNIPQ-MSFDDTER-EPEQTFSLNR-DITGELEYATKISRFSNVYHLSIHIS 157
Query: 1036 SN 1041
N
Sbjct: 158 KN 159
Database: RefSeq44_MP.fasta
Posted date: Nov 15, 2010 4:36 PM
Number of letters in database: 15,452,059
Number of sequences in database: 29,866
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 29866
Number of Hits to DB: 31,789,736
Number of extensions: 764180
Number of successful extensions: 2483
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 2462
Number of HSP's successfully gapped: 7
Length of query: 376
Length of database: 15,452,059
Length adjustment: 103
Effective length of query: 273
Effective length of database: 12,375,861
Effective search space: 3378610053
Effective search space used: 3378610053
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)
Search to RefSeqSP_Rel44
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20070806C-000999
(1128 letters)
Database: RefSeq44_SP.fasta
20,576 sequences; 9,542,844 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003121501.1| PREDICTED: thioredoxin-like protein 1-like [... 530 e-151
Alignment gi|NP_999478.1| thioredoxin [Sus scrofa]. 86 3e-17
Alignment gi|NP_001182301.1| thioredoxin domain-containing protein 8 [Sus... 63 2e-10
Alignment gi|XP_003133283.1| PREDICTED: glutaredoxin-3-like [Sus scrofa]. 56 3e-08
>ref|XP_003121501.1| PREDICTED: thioredoxin-like protein 1-like [Sus scrofa].
Length = 289
Score = 530 bits (1364), Expect = e-151
Identities = 264/282 (93%), Positives = 269/282 (95%), Gaps = 2/282 (0%)
Frame = +1
Query: 289 MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD 468
MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD
Sbjct: 1 MVGVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVD 60
Query: 469 VHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPGSNEDTDIP 648
VHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPGSNEDTDIP
Sbjct: 61 VHQCQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQHLENDPGSNEDTDIP 120
Query: 649 KGYMDLMPFINKAGCECLNESDEHGFDNCLRKDMTFLESDCDEQLLITVAFNQPVKLYSM 828
KGYMDLMPFINKAGCECLNESDEHGFDNCLRKDMTFLESDCDEQLLITVAFNQPVKLYSM
Sbjct: 121 KGYMDLMPFINKAGCECLNESDEHGFDNCLRKDMTFLESDCDEQLLITVAFNQPVKLYSM 180
Query: 829 KFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQN 1008
KFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQN
Sbjct: 181 KFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQN 240
Query: 1009 VNSVTIFVQSNQVKKKPQNFIFYFYWDSGP--GTNMNDFQRV 1128
VNSVTIFVQSNQ +++ I YF + P TNMNDF+RV
Sbjct: 241 VNSVTIFVQSNQGEEETTR-ISYFTFIGTPVQATNMNDFKRV 281
>ref|NP_999478.1| thioredoxin [Sus scrofa].
Length = 105
Score = 85.9 bits (211), Expect = 3e-17
Identities = 43/102 (42%), Positives = 57/102 (55%)
Frame = +1
Query: 298 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQ 477
VK + S FQ L+ AG +L VV F+ CGPC I P F S+S KY VFLEVDV
Sbjct: 2 VKQIESKYAFQEALNSAGEKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDD 61
Query: 478 CQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQ 603
CQ A+ + PTF FF+ ++ ++ GA+ LE I +
Sbjct: 62 CQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINE 103
>ref|NP_001182301.1| thioredoxin domain-containing protein 8 [Sus scrofa].
Length = 118
Score = 63.2 bits (152), Expect = 2e-10
Identities = 30/75 (40%), Positives = 45/75 (60%)
Frame = +1
Query: 337 LSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISAT 516
L AG++L VV+F+ CGPC RI P F +MS +Y +F VDV + A T +I+A
Sbjct: 15 LRSAGNKLVVVEFSATWCGPCKRIYPLFHAMSLQYRNVMFASVDVDSARELARTYHINAI 74
Query: 517 PTFLFFRNKVRIDQY 561
PTF F+ +++ +
Sbjct: 75 PTFQMFKQTQKVNLF 89
>ref|XP_003133283.1| PREDICTED: glutaredoxin-3-like [Sus scrofa].
Length = 334
Score = 56.2 bits (134), Expect = 3e-08
Identities = 31/103 (30%), Positives = 51/103 (49%)
Frame = +1
Query: 298 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQ 477
V VGS F+ L L VV F C ++ + ++ ++PQ F++++
Sbjct: 12 VVEVGSAGQFEELLRLRAKSLLVVHFWAPWAPQCAQMNDVMAELAKEHPQVSFVKLEAEA 71
Query: 478 CQGTAATNNISATPTFLFFRNKVRIDQYQGADAVGLEEKIKQH 606
+ IS+ PTFLFF+N ID+ GA A L +K+++H
Sbjct: 72 VPEVSEKYGISSVPTFLFFKNSQSIDRLDGAHAPELTKKVQRH 114
Database: RefSeq44_SP.fasta
Posted date: Nov 15, 2010 4:36 PM
Number of letters in database: 9,542,844
Number of sequences in database: 20,576
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 20576
Number of Hits to DB: 19,922,524
Number of extensions: 481680
Number of successful extensions: 1527
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1521
Number of HSP's successfully gapped: 4
Length of query: 376
Length of database: 9,542,844
Length adjustment: 99
Effective length of query: 277
Effective length of database: 7,505,820
Effective search space: 2079112140
Effective search space used: 2079112140
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)