Search to RefSeqBP_Rel44
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20101001C-000863
(945 letters)
Database: RefSeq44_BP.fasta
33,615 sequences; 18,071,151 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001095550.1| casein kinase 1, delta [Bos taurus]. 560 e-160
Alignment gi|NP_001071577.1| casein kinase 1 epsilon [Bos taurus]. 548 e-156
Alignment gi|NP_777136.1| casein kinase I isoform alpha [Bos taurus]. 440 e-124
Alignment gi|XP_002689948.1| PREDICTED: casein kinase I alpha-like [Bos t... 420 e-117
Alignment gi|XP_002699872.1| PREDICTED: casein kinase I-like [Bos taurus]. 413 e-115
Alignment gi|XP_002707254.1| PREDICTED: casein kinase I-like [Bos taurus]. 413 e-115
Alignment gi|XP_002700117.1| PREDICTED: casein kinase I-like [Bos taurus]. 386 e-107
Alignment gi|XP_001788962.1| PREDICTED: casein kinase I-like [Bos taurus]. 386 e-107
Alignment gi|NP_001091628.1| casein kinase I isoform beta [Bos taurus]. 379 e-105
Alignment gi|XP_002687979.1| PREDICTED: casein kinase 1, delta [Bos tauru... 374 e-104
>ref|NP_001095550.1| casein kinase 1, delta [Bos taurus].
Length = 409
Score = 560 bits (1442), Expect = e-160
Identities = 273/279 (97%), Positives = 276/279 (98%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK ECVKTKHPQLHIESKIYKMMQ
Sbjct: 1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+GYPSEFATYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279
>ref|NP_001071577.1| casein kinase 1 epsilon [Bos taurus].
Length = 466
Score = 548 bits (1412), Expect = e-156
Identities = 265/279 (94%), Positives = 274/279 (98%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279
>ref|NP_777136.1| casein kinase I isoform alpha [Bos taurus].
Length = 325
Score = 440 bits (1132), Expect = e-124
Identities = 208/276 (75%), Positives = 243/276 (88%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
E VG +Y+L RKIGSGSFGDIYL +I GEEVA+K E K +HPQL ESK+YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
KNFIHRD+KPDNFLMG+G+ N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189
Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
IN HLGIEQSRRDD+ESLGYVLMYFN SLPWQGLKAA ++QKYE+ISEKKMSTP+EVL
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249
Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
+G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285
>ref|XP_002689948.1| PREDICTED: casein kinase I alpha-like [Bos taurus].
Length = 325
Score = 420 bits (1079), Expect = e-117
Identities = 198/276 (71%), Positives = 237/276 (85%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
E VG +Y+L RKI SGSFGD+YL +I GEEVA+K E K +HPQL ESK+ K++QG
Sbjct: 10 EFIVGGKYKLVRKIRSGSFGDMYLAINITNGEEVAVKLESQKARHPQLLYESKLCKILQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
VGIP IRW G + DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQM+ RIEY+H+
Sbjct: 70 EVGIPHIRWYGQQKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMMGRIEYVHT 129
Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
KNFIHRD+KPDNFLMG+G+ N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189
Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
I+ HLGIEQSRRDD+ESLGYVLMYFN SLPWQGLKAA ++QKYE+ISEKKMSTP+EVL
Sbjct: 190 ISAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249
Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
+G+P+EFA YLN+CR LRF++ PDY YL+ LF LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRHLFHILF 285
>ref|XP_002699872.1| PREDICTED: casein kinase I-like [Bos taurus].
Length = 333
Score = 413 bits (1061), Expect = e-115
Identities = 190/276 (68%), Positives = 235/276 (85%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
E G +Y+L RKIGSGSFG +YL +I GEEVA+K E K + PQL ES++YK++QG
Sbjct: 10 EFIAGGKYKLVRKIGSGSFGKVYLAINITNGEEVAVKLEPQKARQPQLLYESRLYKLLQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
GVGIP I W G E DYNV+VM+LLGPSLE+LFN+CSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPRIWWYGQEKDYNVLVMDLLGPSLEELFNYCSRRFTMKTVLMLADQMISRIEYLHT 129
Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
K+FIHRD+KPDNFLMG G N ++++DFGLAK+YRD++T QHIPY+E K+LTGTARYAS
Sbjct: 130 KDFIHRDIKPDNFLMGAGSHCNQLFLVDFGLAKRYRDSKTKQHIPYKEKKSLTGTARYAS 189
Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
+N+HLGIEQSRRDD+ESLGYVLMYFN SLPWQG+K A +QKYE+I E KM+TPIE L
Sbjct: 190 LNSHLGIEQSRRDDMESLGYVLMYFNRSSLPWQGIKTATMKQKYEKICESKMATPIEALC 249
Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
G+PSEFATYLN+CR LRF++ PDY+YL+QLFR+LF
Sbjct: 250 NGFPSEFATYLNYCRGLRFEEAPDYTYLRQLFRSLF 285
>ref|XP_002707254.1| PREDICTED: casein kinase I-like [Bos taurus].
Length = 333
Score = 413 bits (1061), Expect = e-115
Identities = 190/276 (68%), Positives = 235/276 (85%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
E G +Y+L RKIGSGSFG +YL +I GEEVA+K E K + PQL ES++YK++QG
Sbjct: 10 EFIAGGKYKLVRKIGSGSFGKVYLAINITNGEEVAVKLEPQKARQPQLLYESRLYKLLQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
GVGIP I W G E DYNV+VM+LLGPSLE+LFN+CSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPRIWWYGQEKDYNVLVMDLLGPSLEELFNYCSRRFTMKTVLMLADQMISRIEYLHT 129
Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
K+FIHRD+KPDNFLMG G N ++++DFGLAK+YRD++T QHIPY+E K+LTGTARYAS
Sbjct: 130 KDFIHRDIKPDNFLMGAGSHCNQLFLVDFGLAKRYRDSKTKQHIPYKEKKSLTGTARYAS 189
Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
+N+HLGIEQSRRDD+ESLGYVLMYFN SLPWQG+K A +QKYE+I E KM+TPIE L
Sbjct: 190 LNSHLGIEQSRRDDMESLGYVLMYFNRSSLPWQGIKTATMKQKYEKICESKMATPIEALC 249
Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
G+PSEFATYLN+CR LRF++ PDY+YL+QLFR+LF
Sbjct: 250 NGFPSEFATYLNYCRGLRFEEAPDYTYLRQLFRSLF 285
>ref|XP_002700117.1| PREDICTED: casein kinase I-like [Bos taurus].
Length = 336
Score = 386 bits (991), Expect = e-107
Identities = 179/278 (64%), Positives = 228/278 (82%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
++ VG RY+L R+IGSGSFG ++L D+ E+VA+K E T+ P+L E ++Y ++QG
Sbjct: 10 DVLVGGRYKLVREIGSGSFGHVHLAIDLTNHEQVAVKLESQNTRQPRLLYEKELYNILQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+FS+KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPQIRWYGQETDYNVLVMDLLGPSLEDLFNFCSRRFSMKTVLMLADQMISRIEYVHT 129
Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
+N IHRD+KP+NFLMG G++ +++IDFGLAKKYRD RT QHIPYR K+LTGT +AS
Sbjct: 130 QNLIHRDIKPENFLMGTGQQWKELFLIDFGLAKKYRDNRTGQHIPYRSGKSLTGTPSFAS 189
Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
I+ H+GIEQSRRDD+ES+G+VLMYFN GSLPWQGLKAA +QK E+ISE KM+TP++VL
Sbjct: 190 ISAHIGIEQSRRDDMESIGHVLMYFNRGSLPWQGLKAATMKQKCEQISEMKMTTPVDVLC 249
Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+G+P+EFA YL CR L F++ PDY YL+QLF LF +
Sbjct: 250 KGFPAEFAMYLKHCRGLSFEEAPDYRYLRQLFHMLFRK 287
>ref|XP_001788962.1| PREDICTED: casein kinase I-like [Bos taurus].
Length = 336
Score = 386 bits (991), Expect = e-107
Identities = 179/278 (64%), Positives = 228/278 (82%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
++ VG RY+L R+IGSGSFG ++L D+ E+VA+K E T+ P+L E ++Y ++QG
Sbjct: 10 DVLVGGRYKLVREIGSGSFGHVHLAIDLTNHEQVAVKLESQNTRQPRLLYEKELYNILQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+FS+KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPQIRWYGQETDYNVLVMDLLGPSLEDLFNFCSRRFSMKTVLMLADQMISRIEYVHT 129
Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
+N IHRD+KP+NFLMG G++ +++IDFGLAKKYRD RT QHIPYR K+LTGT +AS
Sbjct: 130 QNLIHRDIKPENFLMGTGQQWKELFLIDFGLAKKYRDNRTGQHIPYRSGKSLTGTPSFAS 189
Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
I+ H+GIEQSRRDD+ES+G+VLMYFN GSLPWQGLKAA +QK E+ISE KM+TP++VL
Sbjct: 190 ISAHIGIEQSRRDDMESIGHVLMYFNRGSLPWQGLKAATMKQKCEQISEMKMTTPVDVLC 249
Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+G+P+EFA YL CR L F++ PDY YL+QLF LF +
Sbjct: 250 KGFPAEFAMYLKHCRGLSFEEAPDYRYLRQLFHMLFRK 287
>ref|NP_001091628.1| casein kinase I isoform beta [Bos taurus].
Length = 336
Score = 379 bits (974), Expect = e-105
Identities = 179/278 (64%), Positives = 222/278 (79%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
++ VG RY+L R+IG GSFG +YL D+ E+VA+K E T+ P+L E ++Y +QG
Sbjct: 10 DVLVGGRYKLVREIGFGSFGHVYLAIDLTNHEQVAVKLESENTRQPRLLHEKELYNFLQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+FS+KTVL+LADQMISRIEY+HS
Sbjct: 70 GVGIPQIRWYGQETDYNVLVMDLLGPSLEDLFNFCSRRFSMKTVLMLADQMISRIEYVHS 129
Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
+N IHRD+KPDNFLMG G + ++++DFGLAKKYRD RT QHIP+R K+ GT AS
Sbjct: 130 RNLIHRDIKPDNFLMGTGPQWKKLFLVDFGLAKKYRDNRTGQHIPHRSGKSFIGTPFCAS 189
Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
I+ HLGIEQSRRDD+ES+GYVLMYFN GSLPWQGLKAA +QK E+ISE KM+TP++VL
Sbjct: 190 ISAHLGIEQSRRDDMESIGYVLMYFNRGSLPWQGLKAATLKQKCEKISEMKMTTPVDVLC 249
Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+G+P EFA YL +C L F++ PDY YL+QLFR LF +
Sbjct: 250 KGFPIEFAMYLKYCLRLSFEEAPDYRYLRQLFRLLFRK 287
>ref|XP_002687979.1| PREDICTED: casein kinase 1, delta [Bos taurus].
Length = 259
Score = 374 bits (961), Expect = e-104
Identities = 184/202 (91%), Positives = 191/202 (94%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYV 714
SINTHLGI + R S GY+
Sbjct: 181 SINTHLGIGECARPG--SRGYL 200
Database: RefSeq44_BP.fasta
Posted date: Nov 15, 2010 4:36 PM
Number of letters in database: 18,071,151
Number of sequences in database: 33,615
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33615
Number of Hits to DB: 31,950,509
Number of extensions: 840384
Number of successful extensions: 5640
Number of sequences better than 1.0e-05: 202
Number of HSP's gapped: 5307
Number of HSP's successfully gapped: 202
Length of query: 315
Length of database: 18,071,151
Length adjustment: 102
Effective length of query: 213
Effective length of database: 14,642,421
Effective search space: 3118835673
Effective search space used: 3118835673
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqCP_Rel44
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20101001C-000863
(945 letters)
Database: RefSeq44_CP.fasta
33,359 sequences; 18,921,627 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_861014.1| PREDICTED: similar to casein kinase 1 epsilon i... 548 e-156
Alignment gi|XP_860987.1| PREDICTED: similar to casein kinase 1 epsilon i... 548 e-156
Alignment gi|XP_531738.2| PREDICTED: similar to casein kinase 1 epsilon i... 548 e-156
Alignment gi|XP_850168.1| PREDICTED: similar to casein kinase 1 epsilon i... 548 e-156
Alignment gi|XP_533137.2| PREDICTED: similar to casein kinase 1, delta is... 508 e-144
Alignment gi|XP_860927.1| PREDICTED: similar to casein kinase 1 epsilon i... 496 e-140
Alignment gi|XP_867771.1| PREDICTED: similar to casein kinase 1, alpha 1 ... 440 e-124
Alignment gi|XP_536470.2| PREDICTED: similar to Casein kinase I, alpha is... 440 e-124
Alignment gi|XP_867638.1| PREDICTED: similar to Casein kinase I, alpha is... 440 e-124
Alignment gi|XP_867736.1| PREDICTED: similar to Casein kinase I, alpha is... 439 e-123
>ref|XP_861014.1| PREDICTED: similar to casein kinase 1 epsilon isoform 8 [Canis
familiaris].
Length = 385
Score = 548 bits (1412), Expect = e-156
Identities = 265/279 (94%), Positives = 274/279 (98%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279
>ref|XP_860987.1| PREDICTED: similar to casein kinase 1 epsilon isoform 7 [Canis
familiaris].
Length = 431
Score = 548 bits (1412), Expect = e-156
Identities = 265/279 (94%), Positives = 274/279 (98%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279
>ref|XP_531738.2| PREDICTED: similar to casein kinase 1 epsilon isoform 1 [Canis
familiaris].
Length = 367
Score = 548 bits (1412), Expect = e-156
Identities = 265/279 (94%), Positives = 274/279 (98%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279
>ref|XP_850168.1| PREDICTED: similar to casein kinase 1 epsilon isoform 3 [Canis
familiaris].
Length = 416
Score = 548 bits (1412), Expect = e-156
Identities = 265/279 (94%), Positives = 274/279 (98%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279
>ref|XP_533137.2| PREDICTED: similar to casein kinase 1, delta isoform 2 [Canis
familiaris].
Length = 393
Score = 508 bits (1307), Expect = e-144
Identities = 247/254 (97%), Positives = 250/254 (98%)
Frame = +1
Query: 184 GTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 363
GTDIAAGEEVAIK ECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL
Sbjct: 10 GTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 69
Query: 364 GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV 543
GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV
Sbjct: 70 GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV 129
Query: 544 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY 723
YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY
Sbjct: 130 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY 189
Query: 724 FNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPD 903
FNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL + YPSEFATYLNFCRSLRFDDKPD
Sbjct: 190 FNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKSYPSEFATYLNFCRSLRFDDKPD 249
Query: 904 YSYLKQLFRNLFHR 945
YSYL+QLFRNLFHR
Sbjct: 250 YSYLRQLFRNLFHR 263
>ref|XP_860927.1| PREDICTED: similar to casein kinase 1 epsilon isoform 6 [Canis
familiaris].
Length = 407
Score = 496 bits (1277), Expect = e-140
Identities = 246/279 (88%), Positives = 259/279 (92%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGI + S+G ++ SLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIGEP-----FSVGGMI----TRSLPWQGLKAATKRQKYERISEKKMSTPIEVL 231
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 232 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 270
>ref|XP_867771.1| PREDICTED: similar to casein kinase 1, alpha 1 isoform 15 [Canis
familiaris].
Length = 325
Score = 440 bits (1132), Expect = e-124
Identities = 208/276 (75%), Positives = 243/276 (88%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
E VG +Y+L RKIGSGSFGDIYL +I GEEVA+K E K +HPQL ESK+YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
KNFIHRD+KPDNFLMG+G+ N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189
Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
IN HLGIEQSRRDD+ESLGYVLMYFN SLPWQGLKAA ++QKYE+ISEKKMSTP+EVL
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249
Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
+G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285
>ref|XP_536470.2| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
(CK1) isoform 1 [Canis familiaris].
Length = 337
Score = 440 bits (1132), Expect = e-124
Identities = 208/276 (75%), Positives = 243/276 (88%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
E VG +Y+L RKIGSGSFGDIYL +I GEEVA+K E K +HPQL ESK+YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
KNFIHRD+KPDNFLMG+G+ N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189
Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
IN HLGIEQSRRDD+ESLGYVLMYFN SLPWQGLKAA ++QKYE+ISEKKMSTP+EVL
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249
Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
+G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285
>ref|XP_867638.1| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
(CK1) isoform 3 [Canis familiaris].
Length = 336
Score = 440 bits (1132), Expect = e-124
Identities = 208/276 (75%), Positives = 243/276 (88%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
E VG +Y+L RKIGSGSFGDIYL +I GEEVA+K E K +HPQL ESK+YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
KNFIHRD+KPDNFLMG+G+ N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189
Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
IN HLGIEQSRRDD+ESLGYVLMYFN SLPWQGLKAA ++QKYE+ISEKKMSTP+EVL
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249
Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
+G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285
>ref|XP_867736.1| PREDICTED: similar to Casein kinase I, alpha isoform (CKI-alpha)
(CK1) isoform 12 [Canis familiaris].
Length = 341
Score = 439 bits (1130), Expect = e-123
Identities = 210/280 (75%), Positives = 245/280 (87%), Gaps = 4/280 (1%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
E VG +Y+L RKIGSGSFGDIYL +I GEEVA+K E K +HPQL ESK+YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 472 KNFIHRDVKPDNFLMGLG----KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTA 639
KNFIHRD+KPDNFLMG+G K G+L+++IDFGLAKKYRD RT QHIPYRE+KNLTGTA
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKTGSLLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTA 189
Query: 640 RYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPI 819
RYASIN HLGIEQSRRDD+ESLGYVLMYFN SLPWQGLKAA ++QKYE+ISEKKMSTP+
Sbjct: 190 RYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPV 249
Query: 820 EVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
EVL +G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 EVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 289
Database: RefSeq44_CP.fasta
Posted date: Nov 15, 2010 4:36 PM
Number of letters in database: 18,921,627
Number of sequences in database: 33,359
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33359
Number of Hits to DB: 32,942,120
Number of extensions: 862159
Number of successful extensions: 6216
Number of sequences better than 1.0e-05: 348
Number of HSP's gapped: 5758
Number of HSP's successfully gapped: 351
Length of query: 315
Length of database: 18,921,627
Length adjustment: 103
Effective length of query: 212
Effective length of database: 15,485,650
Effective search space: 3282957800
Effective search space used: 3282957800
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqHP_Rel44
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20101001C-000863
(945 letters)
Database: RefSeq44_HP.fasta
33,950 sequences; 18,324,212 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_620693.1| casein kinase I isoform delta isoform 2 [Homo s... 560 e-160
Alignment gi|NP_001884.2| casein kinase I isoform delta isoform 1 [Homo s... 560 e-160
Alignment gi|NP_689407.1| casein kinase I isoform epsilon [Homo sapiens]. 548 e-156
Alignment gi|NP_001885.1| casein kinase I isoform epsilon [Homo sapiens]. 548 e-156
Alignment gi|NP_001883.4| casein kinase I isoform alpha isoform 2 [Homo s... 440 e-124
Alignment gi|NP_001020276.1| casein kinase I isoform alpha isoform 1 [Hom... 425 e-119
Alignment gi|NP_660204.2| casein kinase I isoform alpha-like [Homo sapien... 419 e-117
Alignment gi|NP_001038187.1| casein kinase I isoform gamma-3 isoform 3 [H... 334 6e-92
Alignment gi|NP_001026982.1| casein kinase I isoform gamma-3 isoform 2 [H... 334 6e-92
Alignment gi|NP_001038188.1| casein kinase I isoform gamma-3 isoform 4 [H... 334 6e-92
>ref|NP_620693.1| casein kinase I isoform delta isoform 2 [Homo sapiens].
Length = 409
Score = 560 bits (1442), Expect = e-160
Identities = 273/279 (97%), Positives = 276/279 (98%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK ECVKTKHPQLHIESKIYKMMQ
Sbjct: 1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+GYPSEFATYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279
>ref|NP_001884.2| casein kinase I isoform delta isoform 1 [Homo sapiens].
Length = 415
Score = 560 bits (1442), Expect = e-160
Identities = 273/279 (97%), Positives = 276/279 (98%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK ECVKTKHPQLHIESKIYKMMQ
Sbjct: 1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+GYPSEFATYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279
>ref|NP_689407.1| casein kinase I isoform epsilon [Homo sapiens].
Length = 416
Score = 548 bits (1412), Expect = e-156
Identities = 265/279 (94%), Positives = 274/279 (98%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279
>ref|NP_001885.1| casein kinase I isoform epsilon [Homo sapiens].
Length = 416
Score = 548 bits (1412), Expect = e-156
Identities = 265/279 (94%), Positives = 274/279 (98%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279
>ref|NP_001883.4| casein kinase I isoform alpha isoform 2 [Homo sapiens].
Length = 337
Score = 440 bits (1132), Expect = e-124
Identities = 208/276 (75%), Positives = 243/276 (88%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
E VG +Y+L RKIGSGSFGDIYL +I GEEVA+K E K +HPQL ESK+YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
KNFIHRD+KPDNFLMG+G+ N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189
Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
IN HLGIEQSRRDD+ESLGYVLMYFN SLPWQGLKAA ++QKYE+ISEKKMSTP+EVL
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249
Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
+G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285
>ref|NP_001020276.1| casein kinase I isoform alpha isoform 1 [Homo sapiens].
Length = 365
Score = 425 bits (1093), Expect = e-119
Identities = 208/304 (68%), Positives = 243/304 (79%), Gaps = 28/304 (9%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
E VG +Y+L RKIGSGSFGDIYL +I GEEVA+K E K +HPQL ESK+YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 472 KNFIHRDVKPDNFLMGLGKKGNL----------------------------VYIIDFGLA 567
KNFIHRD+KPDNFLMG+G+ N +++IDFGLA
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKCLESPVGKRKRSMTVSTSQDPSFSGLNQLFLIDFGLA 189
Query: 568 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 747
KKYRD RT QHIPYRE+KNLTGTARYASIN HLGIEQSRRDD+ESLGYVLMYFN SLPW
Sbjct: 190 KKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPW 249
Query: 748 QGLKAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLF 927
QGLKAA ++QKYE+ISEKKMSTP+EVL +G+P+EFA YLN+CR LRF++ PDY YL+QLF
Sbjct: 250 QGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLF 309
Query: 928 RNLF 939
R LF
Sbjct: 310 RILF 313
>ref|NP_660204.2| casein kinase I isoform alpha-like [Homo sapiens].
Length = 337
Score = 419 bits (1078), Expect = e-117
Identities = 197/276 (71%), Positives = 235/276 (85%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
EL VG +Y+L RKIGSGSFGD+YLG GE+VA+K E K KHPQL ESK+Y ++QG
Sbjct: 10 ELVVGGKYKLVRKIGSGSFGDVYLGITTTNGEDVAVKLESQKVKHPQLLYESKLYTILQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
GVGIP + W G E D NV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHMHWYGQEKDNNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
KNF+HRD+KPDNFLMG G+ N +++IDFGLAKKYRD RT QHIPYRE+K+L GT RYAS
Sbjct: 130 KNFLHRDIKPDNFLMGTGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKHLIGTVRYAS 189
Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
IN HLGIEQSRRDD+ESLGYV MYFN SLPWQGL+A ++QKYE+ISEKKMSTP+EVL
Sbjct: 190 INAHLGIEQSRRDDMESLGYVFMYFNRTSLPWQGLRAMTKKQKYEKISEKKMSTPVEVLC 249
Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
+G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEVPDYMYLRQLFRILF 285
>ref|NP_001038187.1| casein kinase I isoform gamma-3 isoform 3 [Homo sapiens].
Length = 415
Score = 334 bits (857), Expect = 6e-92
Identities = 169/306 (55%), Positives = 223/306 (72%), Gaps = 2/306 (0%)
Frame = +1
Query: 34 KGDLGPGDPSPSAAGRGRTGLAEAAMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEV 213
K D PS + R + ++ L VG +R+G+KIG G+FG++ LG ++ E V
Sbjct: 10 KSDDRMARPSGRSGHNTRGTGSSSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYV 69
Query: 214 AIKFECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNF 393
AIK E +K++ PQLH+E + YK + G GIP + + G G YN MV+ELLGPSLEDLF+
Sbjct: 70 AIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDL 129
Query: 394 CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLA 567
C R FSLKTVL++A Q+ISR+EY+HSKN I+RDVKP+NFL+G K +++IIDFGLA
Sbjct: 130 CDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 189
Query: 568 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 747
K+Y D T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF GSLPW
Sbjct: 190 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 249
Query: 748 QGLKAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLF 927
QGLKA +++Y++I + K +TPIEVL + +P E ATYL + R L F +KPDY YL++LF
Sbjct: 250 QGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLF 308
Query: 928 RNLFHR 945
+LF R
Sbjct: 309 TDLFDR 314
>ref|NP_001026982.1| casein kinase I isoform gamma-3 isoform 2 [Homo sapiens].
Length = 423
Score = 334 bits (857), Expect = 6e-92
Identities = 169/306 (55%), Positives = 223/306 (72%), Gaps = 2/306 (0%)
Frame = +1
Query: 34 KGDLGPGDPSPSAAGRGRTGLAEAAMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEV 213
K D PS + R + ++ L VG +R+G+KIG G+FG++ LG ++ E V
Sbjct: 10 KSDDRMARPSGRSGHNTRGTGSSSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYV 69
Query: 214 AIKFECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNF 393
AIK E +K++ PQLH+E + YK + G GIP + + G G YN MV+ELLGPSLEDLF+
Sbjct: 70 AIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDL 129
Query: 394 CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLA 567
C R FSLKTVL++A Q+ISR+EY+HSKN I+RDVKP+NFL+G K +++IIDFGLA
Sbjct: 130 CDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 189
Query: 568 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 747
K+Y D T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF GSLPW
Sbjct: 190 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 249
Query: 748 QGLKAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLF 927
QGLKA +++Y++I + K +TPIEVL + +P E ATYL + R L F +KPDY YL++LF
Sbjct: 250 QGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLF 308
Query: 928 RNLFHR 945
+LF R
Sbjct: 309 TDLFDR 314
>ref|NP_001038188.1| casein kinase I isoform gamma-3 isoform 4 [Homo sapiens].
Length = 455
Score = 334 bits (857), Expect = 6e-92
Identities = 169/306 (55%), Positives = 223/306 (72%), Gaps = 2/306 (0%)
Frame = +1
Query: 34 KGDLGPGDPSPSAAGRGRTGLAEAAMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEV 213
K D PS + R + ++ L VG +R+G+KIG G+FG++ LG ++ E V
Sbjct: 10 KSDDRMARPSGRSGHNTRGTGSSSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYV 69
Query: 214 AIKFECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNF 393
AIK E +K++ PQLH+E + YK + G GIP + + G G YN MV+ELLGPSLEDLF+
Sbjct: 70 AIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDL 129
Query: 394 CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLA 567
C R FSLKTVL++A Q+ISR+EY+HSKN I+RDVKP+NFL+G K +++IIDFGLA
Sbjct: 130 CDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 189
Query: 568 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 747
K+Y D T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF GSLPW
Sbjct: 190 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 249
Query: 748 QGLKAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLF 927
QGLKA +++Y++I + K +TPIEVL + +P E ATYL + R L F +KPDY YL++LF
Sbjct: 250 QGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLF 308
Query: 928 RNLFHR 945
+LF R
Sbjct: 309 TDLFDR 314
Database: RefSeq44_HP.fasta
Posted date: Nov 15, 2010 4:36 PM
Number of letters in database: 18,324,212
Number of sequences in database: 33,950
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33950
Number of Hits to DB: 32,218,036
Number of extensions: 840896
Number of successful extensions: 5917
Number of sequences better than 1.0e-05: 287
Number of HSP's gapped: 5425
Number of HSP's successfully gapped: 287
Length of query: 315
Length of database: 18,324,212
Length adjustment: 102
Effective length of query: 213
Effective length of database: 14,861,312
Effective search space: 3165459456
Effective search space used: 3165459456
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqMP_Rel44
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20101001C-000863
(945 letters)
Database: RefSeq44_MP.fasta
29,866 sequences; 15,452,059 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_082150.1| casein kinase I isoform delta isoform 2 [Mus mu... 560 e-160
Alignment gi|NP_620690.1| casein kinase I isoform delta isoform 1 [Mus mu... 560 e-160
Alignment gi|NP_038795.3| casein kinase I isoform epsilon [Mus musculus]. 548 e-156
Alignment gi|NP_666199.1| casein kinase I isoform alpha [Mus musculus]. 440 e-124
Alignment gi|NP_690022.2| casein kinase I isoform gamma-3 [Mus musculus]. 338 3e-93
Alignment gi|NP_775277.2| casein kinase I isoform gamma-1 [Mus musculus]. 335 3e-92
Alignment gi|NP_001153063.1| casein kinase I isoform gamma-2 isoform 2 [M... 332 2e-91
Alignment gi|NP_598763.1| casein kinase I isoform gamma-2 isoform 1 [Mus ... 318 3e-87
Alignment gi|NP_001156336.1| tau-tubulin kinase 1 [Mus musculus]. 169 4e-42
Alignment gi|NP_001020028.1| tau-tubulin kinase 2 isoform 2 [Mus musculus]. 163 2e-40
>ref|NP_082150.1| casein kinase I isoform delta isoform 2 [Mus musculus].
Length = 409
Score = 560 bits (1442), Expect = e-160
Identities = 273/279 (97%), Positives = 276/279 (98%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK ECVKTKHPQLHIESKIYKMMQ
Sbjct: 1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+GYPSEFATYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279
>ref|NP_620690.1| casein kinase I isoform delta isoform 1 [Mus musculus].
Length = 415
Score = 560 bits (1442), Expect = e-160
Identities = 273/279 (97%), Positives = 276/279 (98%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK ECVKTKHPQLHIESKIYKMMQ
Sbjct: 1 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+GYPSEFATYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279
>ref|NP_038795.3| casein kinase I isoform epsilon [Mus musculus].
Length = 416
Score = 548 bits (1412), Expect = e-156
Identities = 265/279 (94%), Positives = 274/279 (98%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279
>ref|NP_666199.1| casein kinase I isoform alpha [Mus musculus].
Length = 325
Score = 440 bits (1132), Expect = e-124
Identities = 208/276 (75%), Positives = 243/276 (88%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
E VG +Y+L RKIGSGSFGDIYL +I GEEVA+K E K +HPQL ESK+YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
KNFIHRD+KPDNFLMG+G+ N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189
Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
IN HLGIEQSRRDD+ESLGYVLMYFN SLPWQGLKAA ++QKYE+ISEKKMSTP+EVL
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249
Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
+G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285
>ref|NP_690022.2| casein kinase I isoform gamma-3 [Mus musculus].
Length = 424
Score = 338 bits (868), Expect = 3e-93
Identities = 164/279 (58%), Positives = 214/279 (76%), Gaps = 2/279 (0%)
Frame = +1
Query: 115 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQGG 294
L VG +R+G+KIG G+FG++ LG ++ E VAIK E +K++ PQLH+E + YK + G
Sbjct: 37 LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSG 96
Query: 295 VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 474
GIP + + G G YN MV+ELLGPSLEDLF+ C R FSLKTVL++A Q+ISR+EY+HSK
Sbjct: 97 DGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 156
Query: 475 NFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
N I+RDVKP+NFL+G K +++IIDFGLAK+Y D T +HIPYRE+K+LTGTARY
Sbjct: 157 NLIYRDVKPENFLIGRPGNKAQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM 216
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
SINTHLG EQSRRDDLE+LG++ MYF GSLPWQGLKA +++Y++I + K +TPIEVL
Sbjct: 217 SINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVL 276
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+ +P E ATYL + R L F +KPDY YL++LF +LF R
Sbjct: 277 CENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 315
>ref|NP_775277.2| casein kinase I isoform gamma-1 [Mus musculus].
Length = 459
Score = 335 bits (859), Expect = 3e-92
Identities = 162/289 (56%), Positives = 219/289 (75%), Gaps = 3/289 (1%)
Frame = +1
Query: 88 TGLAEAAMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIES 267
+G + ++ L VG +R+G+KIG G+FG++ LG ++ E VAIK E +K++ PQLH+E
Sbjct: 29 SGTSTSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEY 88
Query: 268 KIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQM 444
+ YK + G G+P + + G G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q+
Sbjct: 89 RFYKQLGSAGEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQL 148
Query: 445 ISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 618
+SR+EY+HSKN I+RDVKP+NFL+G KK ++++IIDFGLAK+Y D T +HIPYRE+
Sbjct: 149 LSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYVDPETKKHIPYREH 208
Query: 619 KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISE 798
K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF GSLPWQGLKA +++Y++I +
Sbjct: 209 KSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGD 268
Query: 799 KKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
K +TPIE L + +P E ATYL + R L F +KPDY YL+ LF +LF R
Sbjct: 269 TKRNTPIEALCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFER 317
>ref|NP_001153063.1| casein kinase I isoform gamma-2 isoform 2 [Mus musculus].
Length = 415
Score = 332 bits (852), Expect = 2e-91
Identities = 165/310 (53%), Positives = 225/310 (72%), Gaps = 6/310 (1%)
Frame = +1
Query: 34 KGDLGPGDP-SPSAAGRGRTGLAEAAME---LRVGNRYRLGRKIGSGSFGDIYLGTDIAA 201
KG+L G S + R G+ + L VG +R+G+KIG G+FG++ LG ++
Sbjct: 9 KGELEEGRRMSKTGTSRSNHGVRSSGTSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYT 68
Query: 202 GEEVAIKFECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLED 381
E VAIK E +K++ PQLH+E + YK + G+P + + G G YN MV+ELLGPSLED
Sbjct: 69 NEYVAIKLEPIKSRAPQLHLEYRFYKQLSTTEGVPQVYYFGPCGKYNAMVLELLGPSLED 128
Query: 382 LFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIID 555
LF+ C R F+LKTVL++A Q+I+R+EY+H+K+ I+RDVKP+NFL+G K+ + ++IID
Sbjct: 129 LFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGSKRQHSIHIID 188
Query: 556 FGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG 735
FGLAK+Y D T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF G
Sbjct: 189 FGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRG 248
Query: 736 SLPWQGLKAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYL 915
SLPWQGLKA +++Y++I + K +TPIEVL + +P E ATYL + R L F +KPDY YL
Sbjct: 249 SLPWQGLKADTLKERYQKIGDTKRATPIEVLCESFPEEMATYLRYVRRLDFFEKPDYDYL 308
Query: 916 KQLFRNLFHR 945
++LF +LF R
Sbjct: 309 RKLFTDLFDR 318
>ref|NP_598763.1| casein kinase I isoform gamma-2 isoform 1 [Mus musculus].
Length = 442
Score = 318 bits (816), Expect = 3e-87
Identities = 165/337 (48%), Positives = 225/337 (66%), Gaps = 33/337 (9%)
Frame = +1
Query: 34 KGDLGPGDP-SPSAAGRGRTGLAEAAME---LRVGNRYRLGRKIGSGSFGDIYLGTDIAA 201
KG+L G S + R G+ + L VG +R+G+KIG G+FG++ LG ++
Sbjct: 9 KGELEEGRRMSKTGTSRSNHGVRSSGTSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYT 68
Query: 202 GEEVAIKFECVKTKHPQLHIESKIYKMMQG---------------------------GVG 300
E VAIK E +K++ PQLH+E + YK + G
Sbjct: 69 NEYVAIKLEPIKSRAPQLHLEYRFYKQLSTTGEADSGTGPALLGQQWLRTPSMDVSFAEG 128
Query: 301 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF 480
+P + + G G YN MV+ELLGPSLEDLF+ C R F+LKTVL++A Q+I+R+EY+H+K+
Sbjct: 129 VPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSL 188
Query: 481 IHRDVKPDNFLMGL--GKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 654
I+RDVKP+NFL+G K+ + ++IIDFGLAK+Y D T +HIPYRE+K+LTGTARY SI
Sbjct: 189 IYRDVKPENFLVGRPGSKRQHSIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSI 248
Query: 655 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLXQ 834
NTHLG EQSRRDDLE+LG++ MYF GSLPWQGLKA +++Y++I + K +TPIEVL +
Sbjct: 249 NTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCE 308
Query: 835 GYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+P E ATYL + R L F +KPDY YL++LF +LF R
Sbjct: 309 SFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 345
>ref|NP_001156336.1| tau-tubulin kinase 1 [Mus musculus].
Length = 1308
Score = 169 bits (427), Expect = 4e-42
Identities = 105/277 (37%), Positives = 147/277 (53%), Gaps = 6/277 (2%)
Frame = +1
Query: 121 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQGGVG 300
V +R+++ +KIG G FG+IY D+ E VA+K E + L +E + K +QG
Sbjct: 30 VKDRWKVLKKIGGGGFGEIYEAMDLLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 89
Query: 301 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 477
+ CG +N +VM+L G +L DL R F+L T L L Q++ IE IHS
Sbjct: 90 VCRFIGCGRNEKFNYVVMQLQGRNLADLRRSQPRGTFTLSTTLRLGKQILESIEAIHSVG 149
Query: 478 FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 654
F+HRD+KP NF MG L Y++DFGLA++Y + T P R GT RYAS+
Sbjct: 150 FLHRDIKPSNFAMGRLPSTYRKCYMLDFGLARQYTNT-TGDVRPPRNVAGFRGTVRYASV 208
Query: 655 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQ----RQKYERISEKKMSTPIE 822
N H E R DDL SL Y+L+ F +G LPW+ +K Q ++KYE
Sbjct: 209 NAHKNREMGRHDDLWSLFYMLVEFAVGQLPWRKIKDKEQVGMIKEKYEH----------R 258
Query: 823 VLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRN 933
+L + PSEF +L+ SL + KPDY + +F N
Sbjct: 259 MLLKHMPSEFHLFLDHIASLDYFTKPDYQLIMSVFEN 295
>ref|NP_001020028.1| tau-tubulin kinase 2 isoform 2 [Mus musculus].
Length = 1243
Score = 163 bits (413), Expect = 2e-40
Identities = 101/273 (36%), Positives = 145/273 (53%), Gaps = 2/273 (0%)
Frame = +1
Query: 121 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQGGVG 300
V R+++ RKIG G FG+IY D+ E VA+K E + L +E + K +QG
Sbjct: 17 VKERWKVLRKIGGGGFGEIYDALDMLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 76
Query: 301 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 477
+ CG +N +VM+L G +L DL SR F++ T L L Q++ IE IHS
Sbjct: 77 VCRFIGCGRNDRFNYVVMQLQGRNLADLRRSQSRGTFTISTTLRLGKQILESIESIHSVG 136
Query: 478 FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 654
F+HRD+KP NF MG +++DFGLA+++ ++ P R GT RYASI
Sbjct: 137 FLHRDIKPSNFAMGRFPSTCRKCFMLDFGLARQFTNSCGDVR-PPRAVAGFRGTVRYASI 195
Query: 655 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLXQ 834
N H E R DDL SL Y+L+ F +G LPW+ +K E++ K ++ +
Sbjct: 196 NAHRNREMGRHDDLWSLFYMLVEFVVGQLPWRKIK------DKEQVGSIKERYDHRLMLK 249
Query: 835 GYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRN 933
P EF+T+L+ SL + KPDY L +F N
Sbjct: 250 HLPPEFSTFLDHISSLDYFTKPDYQLLTSVFDN 282
Database: RefSeq44_MP.fasta
Posted date: Nov 15, 2010 4:36 PM
Number of letters in database: 15,452,059
Number of sequences in database: 29,866
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 29866
Number of Hits to DB: 26,538,155
Number of extensions: 675980
Number of successful extensions: 4516
Number of sequences better than 1.0e-05: 240
Number of HSP's gapped: 4142
Number of HSP's successfully gapped: 242
Length of query: 315
Length of database: 15,452,059
Length adjustment: 101
Effective length of query: 214
Effective length of database: 12,435,593
Effective search space: 2661216902
Effective search space used: 2661216902
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 34 (17.7 bits)
Search to RefSeqSP_Rel44
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20101001C-000863
(945 letters)
Database: RefSeq44_SP.fasta
20,576 sequences; 9,542,844 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|XP_003126072.1| PREDICTED: casein kinase I isoform epsilon-l... 548 e-156
Alignment gi|XP_003124136.1| PREDICTED: casein kinase I isoform alpha-lik... 440 e-124
Alignment gi|XP_003124137.1| PREDICTED: casein kinase I isoform alpha-lik... 425 e-119
Alignment gi|XP_003123926.1| PREDICTED: casein kinase I isoform gamma-3-l... 339 1e-93
Alignment gi|XP_003123049.1| PREDICTED: casein kinase I isoform gamma-2-l... 313 1e-85
Alignment gi|XP_001927058.2| PREDICTED: casein kinase I isoform gamma-1-l... 306 1e-83
Alignment gi|XP_001926941.2| PREDICTED: tau-tubulin kinase 1-like [Sus sc... 169 2e-42
Alignment gi|XP_001929339.1| PREDICTED: tau-tubulin kinase 1-like [Sus sc... 169 2e-42
Alignment gi|XP_003125168.1| PREDICTED: serine/threonine-protein kinase V... 120 1e-27
Alignment gi|XP_001927416.2| PREDICTED: serine/threonine-protein kinase V... 109 2e-24
>ref|XP_003126072.1| PREDICTED: casein kinase I isoform epsilon-like [Sus scrofa].
Length = 416
Score = 548 bits (1412), Expect = e-156
Identities = 265/279 (94%), Positives = 274/279 (98%)
Frame = +1
Query: 109 MELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQ 288
MELRVGN+YRLGRKIGSGSFGDIYLG +IA+GEEVAIK ECVKTKHPQLHIESK YKMMQ
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQ 60
Query: 289 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 468
GGVGIP+I+WCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH
Sbjct: 61 GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 469 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 648
SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 649 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL 828
SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA +RQKYERISEKKMSTPIEVL
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 829 XQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLFHR 945
+GYPSEF+TYLNFCRSLRFDDKPDYSYL+QLFRNLFHR
Sbjct: 241 CKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 279
>ref|XP_003124136.1| PREDICTED: casein kinase I isoform alpha-like isoform 1 [Sus
scrofa].
Length = 337
Score = 440 bits (1132), Expect = e-124
Identities = 208/276 (75%), Positives = 243/276 (88%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
E VG +Y+L RKIGSGSFGDIYL +I GEEVA+K E K +HPQL ESK+YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 472 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYAS 651
KNFIHRD+KPDNFLMG+G+ N +++IDFGLAKKYRD RT QHIPYRE+KNLTGTARYAS
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYAS 189
Query: 652 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLX 831
IN HLGIEQSRRDD+ESLGYVLMYFN SLPWQGLKAA ++QKYE+ISEKKMSTP+EVL
Sbjct: 190 INAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLC 249
Query: 832 QGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRNLF 939
+G+P+EFA YLN+CR LRF++ PDY YL+QLFR LF
Sbjct: 250 KGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILF 285
>ref|XP_003124137.1| PREDICTED: casein kinase I isoform alpha-like isoform 2 [Sus
scrofa].
Length = 365
Score = 425 bits (1093), Expect = e-119
Identities = 208/304 (68%), Positives = 243/304 (79%), Gaps = 28/304 (9%)
Frame = +1
Query: 112 ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQG 291
E VG +Y+L RKIGSGSFGDIYL +I GEEVA+K E K +HPQL ESK+YK++QG
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQG 69
Query: 292 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 471
GVGIP IRW G E DYNV+VM+LLGPSLEDLFNFCSR+F++KTVL+LADQMISRIEY+H+
Sbjct: 70 GVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHT 129
Query: 472 KNFIHRDVKPDNFLMGLGKKGNL----------------------------VYIIDFGLA 567
KNFIHRD+KPDNFLMG+G+ N +++IDFGLA
Sbjct: 130 KNFIHRDIKPDNFLMGIGRHCNKCLESPVGKRKRSMTVSTSQDPSFSGLNQLFLIDFGLA 189
Query: 568 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 747
KKYRD RT QHIPYRE+KNLTGTARYASIN HLGIEQSRRDD+ESLGYVLMYFN SLPW
Sbjct: 190 KKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPW 249
Query: 748 QGLKAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLF 927
QGLKAA ++QKYE+ISEKKMSTP+EVL +G+P+EFA YLN+CR LRF++ PDY YL+QLF
Sbjct: 250 QGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLF 309
Query: 928 RNLF 939
R LF
Sbjct: 310 RILF 313
>ref|XP_003123926.1| PREDICTED: casein kinase I isoform gamma-3-like [Sus scrofa].
Length = 424
Score = 339 bits (869), Expect = 1e-93
Identities = 169/306 (55%), Positives = 223/306 (72%), Gaps = 2/306 (0%)
Frame = +1
Query: 34 KGDLGPGDPSPSAAGRGRTGLAEAAMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEV 213
K D PS + R + ++ L VG +R+G+KIG G+FG++ LG ++ E V
Sbjct: 10 KSDDRMARPSGRSGHNTRGTGSSSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYV 69
Query: 214 AIKFECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNF 393
AIK E +K++ PQLH+E + YK + G GIP + + G G YN MV+ELLGPSLEDLF+
Sbjct: 70 AIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDL 129
Query: 394 CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDFGLA 567
C R FSLKTVL++A Q+ISR+EY+HSKN I+RDVKP+NFL+G K +++IIDFGLA
Sbjct: 130 CDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 189
Query: 568 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 747
K+Y D T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE+LG++ MYF GSLPW
Sbjct: 190 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 249
Query: 748 QGLKAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLF 927
QGLKA +++Y++I + K +TPIEVL + +P E ATYL + R L F +KPDY YL++LF
Sbjct: 250 QGLKADTLKERYQKIGDTKRATPIEVLCENFPEEMATYLRYVRRLDFFEKPDYDYLRKLF 309
Query: 928 RNLFHR 945
+LF R
Sbjct: 310 TDLFDR 315
>ref|XP_003123049.1| PREDICTED: casein kinase I isoform gamma-2-like [Sus scrofa].
Length = 409
Score = 313 bits (801), Expect = 1e-85
Identities = 156/309 (50%), Positives = 216/309 (69%), Gaps = 5/309 (1%)
Frame = +1
Query: 34 KGDLGPGDPSPSAAGRGRTGLAEAAME---LRVGNRYRLGRKIGSGSFGDIYLGTDIAAG 204
KG+ G A GR G+ + L VG +R+G+KIG G+FG++ LG ++
Sbjct: 9 KGESEEGRRMSKAGGRTSHGVRSSGTSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTN 68
Query: 205 EEVAIKFECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDL 384
E VAIK E +K++ PQLH+E + YK + G+P + + G G YN MV+ELLGPSLEDL
Sbjct: 69 EYVAIKLEPIKSRAPQLHLEYRFYKQLSAAEGVPQVYYFGPCGKYNAMVLELLGPSLEDL 128
Query: 385 FNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNLVYIIDF 558
F+ C R F+LKTVL++A Q+I+R+EY+H+K+ I+RDVKP+NFL+G K+ + ++IIDF
Sbjct: 129 FDLCDRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDF 188
Query: 559 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGS 738
GLAK+Y D T +HIPYRE+K+LTGTARY SINTHLG + +L + G + MYF GS
Sbjct: 189 GLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLG-----KGELHAXGPMFMYFLRGS 243
Query: 739 LPWQGLKAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLK 918
LPWQGLKA +++Y++I + K +TPIEVL + +P E ATYL + R L F +KPDY YL+
Sbjct: 244 LPWQGLKADTLKERYQKIGDTKRATPIEVLCESFPEEMATYLRYVRRLDFFEKPDYDYLR 303
Query: 919 QLFRNLFHR 945
+LF +LF R
Sbjct: 304 KLFTDLFDR 312
>ref|XP_001927058.2| PREDICTED: casein kinase I isoform gamma-1-like, partial [Sus
scrofa].
Length = 397
Score = 306 bits (783), Expect = 1e-83
Identities = 148/255 (58%), Positives = 195/255 (76%), Gaps = 3/255 (1%)
Frame = +1
Query: 190 DIAAGEEVAIKFECVKTKHPQLHIESKIYKMM-QGGVGIPTIRWCGAEGDYNVMVMELLG 366
++ E VAIK E +K++ PQLH+E + YK + G G+P + + G G YN MV+ELLG
Sbjct: 2 NLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAGDGLPQVYYFGPCGKYNAMVLELLG 61
Query: 367 PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGL--GKKGNL 540
PSLEDLF+ C R F+LKTVL++A Q++SR+EY+HSKN I+RDVKP+NFL+G KK ++
Sbjct: 62 PSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHV 121
Query: 541 VYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM 720
++IIDFGLAK+Y D T +HIPYRE+K+LTGTARY SINTHLG EQSRRDDLE+LG++ M
Sbjct: 122 IHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFM 181
Query: 721 YFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKP 900
YF GSLPWQGLKA +++Y++I + K +TPIE L + +P E ATYL + R L F +KP
Sbjct: 182 YFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEALCENFPEEMATYLRYVRRLDFFEKP 241
Query: 901 DYSYLKQLFRNLFHR 945
DY YL+ LF +LF R
Sbjct: 242 DYEYLRTLFTDLFER 256
>ref|XP_001926941.2| PREDICTED: tau-tubulin kinase 1-like [Sus scrofa].
Length = 713
Score = 169 bits (427), Expect = 2e-42
Identities = 105/277 (37%), Positives = 147/277 (53%), Gaps = 6/277 (2%)
Frame = +1
Query: 121 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQGGVG 300
V +R+++ +KIG G FG+IY D+ E VA+K E + L +E + K +QG
Sbjct: 30 VKDRWKVLKKIGGGGFGEIYEAMDLLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 89
Query: 301 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 477
+ CG +N +VM+L G +L DL R F+L T L L Q++ IE IHS
Sbjct: 90 VCRFIGCGRNEKFNYVVMQLQGRNLADLRRSQPRGTFTLSTTLRLGKQILESIEAIHSVG 149
Query: 478 FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 654
F+HRD+KP NF MG L Y++DFGLA++Y + T P R GT RYAS+
Sbjct: 150 FLHRDIKPSNFAMGRLPSTYRKCYMLDFGLARQYTNT-TGDVRPPRNVAGFRGTVRYASV 208
Query: 655 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQ----RQKYERISEKKMSTPIE 822
N H E R DDL SL Y+L+ F +G LPW+ +K Q ++KYE
Sbjct: 209 NAHKNREMGRHDDLWSLFYMLVEFAVGQLPWRKIKDKEQVGMIKEKYEH----------R 258
Query: 823 VLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRN 933
+L + PSEF +L+ SL + KPDY + +F N
Sbjct: 259 MLLKHMPSEFHLFLDHIASLDYFTKPDYQLIMSVFEN 295
>ref|XP_001929339.1| PREDICTED: tau-tubulin kinase 1-like [Sus scrofa].
Length = 1336
Score = 169 bits (427), Expect = 2e-42
Identities = 105/277 (37%), Positives = 147/277 (53%), Gaps = 6/277 (2%)
Frame = +1
Query: 121 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQLHIESKIYKMMQGGVG 300
V +R+++ +KIG G FG+IY D+ E VA+K E + L +E + K +QG
Sbjct: 61 VKDRWKVLKKIGGGGFGEIYEAMDLLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDH 120
Query: 301 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 477
+ CG +N +VM+L G +L DL R F+L T L L Q++ IE IHS
Sbjct: 121 VCRFIGCGRNEKFNYVVMQLQGRNLADLRRSQPRGTFTLSTTLRLGKQILESIEAIHSVG 180
Query: 478 FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 654
F+HRD+KP NF MG L Y++DFGLA++Y + T P R GT RYAS+
Sbjct: 181 FLHRDIKPSNFAMGRLPSTYRKCYMLDFGLARQYTNT-TGDVRPPRNVAGFRGTVRYASV 239
Query: 655 NTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAIQ----RQKYERISEKKMSTPIE 822
N H E R DDL SL Y+L+ F +G LPW+ +K Q ++KYE
Sbjct: 240 NAHKNREMGRHDDLWSLFYMLVEFAVGQLPWRKIKDKEQVGMIKEKYEH----------R 289
Query: 823 VLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQLFRN 933
+L + PSEF +L+ SL + KPDY + +F N
Sbjct: 290 MLLKHMPSEFHLFLDHIASLDYFTKPDYQLIMSVFEN 326
>ref|XP_003125168.1| PREDICTED: serine/threonine-protein kinase VRK2-like [Sus scrofa].
Length = 507
Score = 120 bits (300), Expect = 1e-27
Identities = 93/291 (31%), Positives = 135/291 (46%), Gaps = 24/291 (8%)
Frame = +1
Query: 124 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKFECVKTKHPQ---LHIESKIY------ 276
G ++ LG+ I SG FG IYL +A E +K ++ + L E K Y
Sbjct: 26 GKQWVLGKMIDSGGFGLIYLA--FSASEPDKDAKHVIKVEYQENGPLFSELKFYQRAAKK 83
Query: 277 -------KMMQ-GGVGIPTIRWCGAEG----DYNVMVMELLGPSLEDLFNFCSRKFSLKT 420
K+ Q +GIP G Y MVME LG +L+ + + + F T
Sbjct: 84 DNIKKWIKLKQLDYLGIPLFYGSGITEFKGRSYRFMVMERLGINLQKISDQ-NGTFKKST 142
Query: 421 VLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH 600
VL L +M+ +EYIH ++H D+K N L+G + + VY+ D+GL+ +Y H+
Sbjct: 143 VLQLGVRMLDVLEYIHENEYVHGDIKAANLLLGY-RNPDRVYLADYGLSYRYCPDGNHKQ 201
Query: 601 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL---KAAIQ 771
K GT + S++ H G+ SRR DLE LGY L+ + G LPW+ A+Q
Sbjct: 202 YQENPKKGHNGTIEFTSLDAHKGVALSRRSDLEILGYCLLRWLCGKLPWERNLQDPVAVQ 261
Query: 772 RQKYERISEKKMSTPIEVLXQGYPSEFATYLNFCRSLRFDDKPDYSYLKQL 924
K + E S E A YL SL +D+KPDY LK++
Sbjct: 262 TAKTNLLDELPESVFKWAPSGSSCHEIAKYLVCAHSLAYDEKPDYQKLKKI 312
>ref|XP_001927416.2| PREDICTED: serine/threonine-protein kinase VRK1-like [Sus scrofa].
Length = 615
Score = 109 bits (272), Expect = 2e-24
Identities = 63/202 (31%), Positives = 106/202 (52%), Gaps = 6/202 (2%)
Frame = +1
Query: 337 YNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLM 516
Y M+M+ G L+ ++ +++FS KTVL L+ +++ +EYIH ++H D+K N L+
Sbjct: 258 YRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLL 317
Query: 517 GLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDL 696
K + VY++D+GLA +Y H+ + GT + SI+ H G+ SRR DL
Sbjct: 318 SY-KNPDQVYLVDYGLAYRYCPEGIHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDL 376
Query: 697 ESLGYVLMYFNLGSLPWQGLKAAIQRQKYERISEKKMSTPIEVL------XQGYPSEFAT 858
E LGY ++ + G LPW+ ++ Y R S+ + I L + P E A
Sbjct: 377 EILGYCMVQWLSGHLPWED---NLKDPNYVRDSKIRYRENIAGLMDKCFPEKNKPDEIAK 433
Query: 859 YLNFCRSLRFDDKPDYSYLKQL 924
Y+ + L + +KP Y L+++
Sbjct: 434 YMETVKLLDYAEKPLYQKLREI 455
Database: RefSeq44_SP.fasta
Posted date: Nov 15, 2010 4:36 PM
Number of letters in database: 9,542,844
Number of sequences in database: 20,576
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 20576
Number of Hits to DB: 17,027,859
Number of extensions: 447688
Number of successful extensions: 2962
Number of sequences better than 1.0e-05: 111
Number of HSP's gapped: 2795
Number of HSP's successfully gapped: 111
Length of query: 315
Length of database: 9,542,844
Length adjustment: 98
Effective length of query: 217
Effective length of database: 7,526,396
Effective search space: 1633227932
Effective search space used: 1633227932
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)