Search to RefSeqSP_Rel44
BLASTX 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 20101001C-003657
(1369 letters)
Database: RefSeq44_SP.fasta
20,576 sequences; 9,542,844 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Alignment gi|NP_001096150.1| antigen-presenting glycoprotein CD1d [Sus sc... 684 0.0
Alignment gi|NP_001090961.1| CD1E antigen [Sus scrofa]. 347 6e-96
Alignment gi|NP_001090960.1| CD1B antigen [Sus scrofa]. 340 7e-94
Alignment gi|NP_998996.1| T-cell surface glycoprotein CD1a precursor [Sus... 324 5e-89
Alignment gi|XP_001926657.2| PREDICTED: hereditary hemochromatosis protei... 89 5e-18
Alignment gi|XP_001928005.2| PREDICTED: hereditary hemochromatosis protei... 89 5e-18
Alignment gi|XP_003130402.1| PREDICTED: major histocompatibility complex ... 83 3e-16
Alignment gi|NP_001107175.1| MHC class I antigen 8 [Sus scrofa]. 74 2e-13
Alignment gi|NP_999362.2| igG receptor FcRn large subunit p51 [Sus scrofa]. 73 3e-13
Alignment gi|XP_003127363.1| PREDICTED: IgG receptor FcRn large subunit p... 71 1e-12
>ref|NP_001096150.1| antigen-presenting glycoprotein CD1d [Sus scrofa].
Length = 341
Score = 684 bits (1765), Expect = 0.0
Identities = 326/341 (95%), Positives = 328/341 (96%)
Frame = +1
Query: 22 MGYLPFVLLWGLPQIWGNSEGSSDLHSLPASPRFFPLRCLQISSFANSSWTRTDGLGWVG 201
MGYLPFVLLWGLPQIWGN EGSSDLHSLP+SPRFFPLRCLQISSFANSSWTRTDGLGWVG
Sbjct: 1 MGYLPFVLLWGLPQIWGNCEGSSDLHSLPSSPRFFPLRCLQISSFANSSWTRTDGLGWVG 60
Query: 202 ELQAYTWRNDSDTIVFLKPWSQGTLSDQLANQLQHIFKGYRSSFTRDIREFVKMLGSDYP 381
ELQAYTWRNDSDTIVFLKPWSQGTLSDQLANQLQHIFKGYRSSFTRDIREFVKMLGSDYP
Sbjct: 61 ELQAYTWRNDSDTIVFLKPWSQGTLSDQLANQLQHIFKGYRSSFTRDIREFVKMLGSDYP 120
Query: 382 FEIQISAGCEVLSGNSSESFLHTAFQGTDIMSFQGTSWVSAPDAPPWMQRVCRVLNEDQG 561
FEIQISAGCEVLSGNSSESFLH+AFQGTDIMSFQGTSWVSAPDAPPWMQRVCRVLNEDQG
Sbjct: 121 FEIQISAGCEVLSGNSSESFLHSAFQGTDIMSFQGTSWVSAPDAPPWMQRVCRVLNEDQG 180
Query: 562 TKETVQWLLYDICPQFVRGVLETGKSELEKQVKPEAWLSSGPTPGPGRLLLVCHVSGFYP 741
TKETVQWLLYDICPQFVRGVLETGKSELEKQVKPEAWLSSGPTPGPGRLLLVCHVSGFYP
Sbjct: 181 TKETVQWLLYDICPQFVRGVLETGKSELEKQVKPEAWLSSGPTPGPGRLLLVCHVSGFYP 240
Query: 742 KPVWVMWMRGEQEQPGTQQGDILPHADGTWYLRVTLDVAAGEASGLSCRVKHSSLGDQDI 921
KPVWVMWMRGEQEQPGTQQGDILPHADGTWYLRVTLDVAAGEASGLSCRVKHSSLGDQDI
Sbjct: 241 KPVWVMWMRGEQEQPGTQQGDILPHADGTWYLRVTLDVAAGEASGLSCRVKHSSLGDQDI 300
Query: 922 ILYWDXXXXXXXXXXXXAFILVLGGSFAFWFRRRRVYQNIQ 1044
ILYWD AFILVLGGSFAFWFRRRRVYQNIQ
Sbjct: 301 ILYWDHSHVLVIVLSVLAFILVLGGSFAFWFRRRRVYQNIQ 341
>ref|NP_001090961.1| CD1E antigen [Sus scrofa].
Length = 324
Score = 347 bits (891), Expect = 6e-96
Identities = 167/276 (60%), Positives = 200/276 (72%)
Frame = +1
Query: 106 PASPRFFPLRCLQISSFANSSWTRTDGLGWVGELQAYTWRNDSDTIVFLKPWSQGTLSDQ 285
PA+ R LQISSFAN SW T G GW+GELQ ++W N TI FL PW+QG S +
Sbjct: 29 PAAEEPLSFRILQISSFANHSWVCTHGSGWLGELQTHSWDNVLGTIRFLLPWAQGNFSKE 88
Query: 286 LANQLQHIFKGYRSSFTRDIREFVKMLGSDYPFEIQISAGCEVLSGNSSESFLHTAFQGT 465
+Q K Y SF ++++ F L +YPFE+Q+S GC +SESF + A+QG+
Sbjct: 89 ELKNIQAFLKLYFHSFPQEVQAFSSQLQFEYPFELQLSLGCLSRPVKASESFFNGAYQGS 148
Query: 466 DIMSFQGTSWVSAPDAPPWMQRVCRVLNEDQGTKETVQWLLYDICPQFVRGVLETGKSEL 645
D +SFQG SW + A Q C VLN + KE V+ LYDI P+F+ G+L+ GKSEL
Sbjct: 149 DFLSFQGNSWTPSLGAGSQAQNACTVLNHYRVIKEIVEVALYDIRPRFLAGLLQAGKSEL 208
Query: 646 EKQVKPEAWLSSGPTPGPGRLLLVCHVSGFYPKPVWVMWMRGEQEQPGTQQGDILPHADG 825
E+QVKPEAWLS GP+PGPGRLLL+CH+SGF+PKPVWVMWMRGEQEQ TQ+GDILPHADG
Sbjct: 209 ERQVKPEAWLSKGPSPGPGRLLLICHISGFHPKPVWVMWMRGEQEQQATQRGDILPHADG 268
Query: 826 TWYLRVTLDVAAGEASGLSCRVKHSSLGDQDIILYW 933
TWYLRVTLDVAAGEA+GLSCRVKHSSLG DIILYW
Sbjct: 269 TWYLRVTLDVAAGEATGLSCRVKHSSLGGHDIILYW 304
>ref|NP_001090960.1| CD1B antigen [Sus scrofa].
Length = 333
Score = 340 bits (873), Expect = 7e-94
Identities = 162/302 (53%), Positives = 210/302 (69%), Gaps = 1/302 (0%)
Frame = +1
Query: 139 LQISSFANSSWTRTDGLGWVGELQAYTWRNDSDTIVFLKPWSQGTLSDQLANQLQHIFKG 318
+QIS++ANS+W + G GW+G+LQ + W +DS T +FLKPWS+G S++ ++ + +
Sbjct: 31 IQISTYANSTWAQNQGSGWLGDLQIHGWDSDSGTAIFLKPWSKGNFSNEEVTEVVDLLRV 90
Query: 319 YRSSFTRDIREFVKMLGSDYPFEIQISAGCEVLSGNSSESFLHTAFQGTDIMSFQGTSWV 498
Y FTR++++ K +YPF IQ +AGCE+ G + SFL A G D +S + V
Sbjct: 91 YLIGFTREVQDKAKEFQLEYPFVIQGTAGCELHPGKAISSFLRGALGGLDFVSLKNNLCV 150
Query: 499 SAPDAPPWMQRVCRVLNEDQGTKETVQWLLYDICPQFVRGVLETGKSELEKQVKPEAWLS 678
AP+ Q+ C ++ + QG + ++ LL + CP+++ GVL+ GK+EL++QVKPEAWLS
Sbjct: 151 PAPEGGSKAQQFCALIIQYQGILDIIETLLSETCPRYLLGVLDAGKAELQRQVKPEAWLS 210
Query: 679 SGPTPGPGRLLLVCHVSGFYPKPVWVMWMRGEQEQPGTQQGDILPHADGTWYLRVTLDVA 858
SGPTPGPGRLLLVCHVSGFYPKPVWVMWMRGEQEQP TQ+GDILPHADGTWY RVTLDV
Sbjct: 211 SGPTPGPGRLLLVCHVSGFYPKPVWVMWMRGEQEQPSTQRGDILPHADGTWYFRVTLDVV 270
Query: 859 AGEASGLSCRVKHSSLGDQDIILYWDXXXXXXXXXXXXAF-ILVLGGSFAFWFRRRRVYQ 1035
AGE SGLSCRVKHSSLGDQDIILYW L+L A W+ RR YQ
Sbjct: 271 AGEVSGLSCRVKHSSLGDQDIILYWGHPTSITLIVLAIIVPFLILLICLALWYWRRWSYQ 330
Query: 1036 NI 1041
++
Sbjct: 331 SV 332
>ref|NP_998996.1| T-cell surface glycoprotein CD1a precursor [Sus scrofa].
Length = 339
Score = 324 bits (831), Expect = 5e-89
Identities = 154/292 (52%), Positives = 195/292 (66%)
Frame = +1
Query: 145 ISSFANSSWTRTDGLGWVGELQAYTWRNDSDTIVFLKPWSQGTLSDQLANQLQHIFKGYR 324
ISSF N SW W+GELQ + SD +++ +PWS+G S + + +HI + +
Sbjct: 33 ISSFYNRSWEEEVCSAWLGELQTHRREGKSDIVIYRQPWSKGNFSREDLMESEHILRMFF 92
Query: 325 SSFTRDIREFVKMLGSDYPFEIQISAGCEVLSGNSSESFLHTAFQGTDIMSFQGTSWVSA 504
F + +YPF++QI+ GC++ G +S F+ A+QG+D SFQ SW+ +
Sbjct: 93 VRFVQAFFNHASQWKLEYPFDVQIAGGCDLYHGETSVGFVRIAYQGSDFASFQNNSWLPS 152
Query: 505 PDAPPWMQRVCRVLNEDQGTKETVQWLLYDICPQFVRGVLETGKSELEKQVKPEAWLSSG 684
P Q VC++ N QGT E + LL D CP+FV G+L+ GK++L++QV+PEAWLSSG
Sbjct: 153 PKGGTRAQLVCKLFNLYQGTLEIIHKLLSDTCPRFVLGLLDAGKADLQRQVRPEAWLSSG 212
Query: 685 PTPGPGRLLLVCHVSGFYPKPVWVMWMRGEQEQPGTQQGDILPHADGTWYLRVTLDVAAG 864
P P PG L+LVCHVSGFYPKP+WVMWMR EQEQPGTQQGDILP+ADGTWYLRVTLDVAAG
Sbjct: 213 PNPSPGHLMLVCHVSGFYPKPIWVMWMRDEQEQPGTQQGDILPNADGTWYLRVTLDVAAG 272
Query: 865 EASGLSCRVKHSSLGDQDIILYWDXXXXXXXXXXXXAFILVLGGSFAFWFRR 1020
EASGLSCRVKHSSLG QDIILYW+ LVL AFW R+
Sbjct: 273 EASGLSCRVKHSSLGGQDIILYWEQHSSVGWILLAVIVPLVLLTGLAFWHRK 324
>ref|XP_001926657.2| PREDICTED: hereditary hemochromatosis protein homolog [Sus scrofa].
Length = 355
Score = 89.0 bits (219), Expect = 5e-18
Identities = 70/265 (26%), Positives = 119/265 (44%), Gaps = 13/265 (4%)
Frame = +1
Query: 181 DGLGWVGELQAYTWRNDSDTIVFLKPWSQGTLSDQLANQLQHIFKGYRSSFTRDI----- 345
+ LG+V + ++ ++S PW G S+QL QL KG+ FT D
Sbjct: 48 EALGYVDDQLFVSYNHESRRAEPRAPWLSGKASNQLWLQLSQSLKGWDHMFTVDFWTIMD 107
Query: 346 ----REFVKMLGSDYPFEIQISAGCEVLSGNSSESFLHTAFQGTDIMSF--QGTSWVSAP 507
+ K+ +Q+ GCEV + NS+ F + G D + F + W A
Sbjct: 108 NHNYSKITKLGVLPESHTLQVILGCEVQADNSTRGFWKYGYDGQDHLEFHPETLDW-GAA 166
Query: 508 DAPPWMQRVCRVLNEDQGTKETVQWLLYDICPQFVRGVLETGKSELEKQVKPEAWLSSGP 687
+ W ++ +++ + K+ +L D CP+ +R +LE G+ L++Q P ++
Sbjct: 167 EPRAWATKLEWEVSKIRA-KQNRAYLERD-CPEQLRRLLELGRGALDQQAPPLVKVTHHV 224
Query: 688 TPGPGRLLLVCHVSGFYPKPVWVMWMRGEQ--EQPGTQQGDILPHADGTWYLRVTLDVAA 861
L C FYP+ + + W++ Q + + D+LP+ DGT+ V L V
Sbjct: 225 ASAVTTLR--CQALNFYPQNITMRWLKDRQPLDAKDIEPRDVLPNGDGTYQSWVALVVLP 282
Query: 862 GEASGLSCRVKHSSLGDQDIILYWD 936
GE SC+V+H L DQ + W+
Sbjct: 283 GEEQRYSCQVEHPGL-DQPLTARWE 306
>ref|XP_001928005.2| PREDICTED: hereditary hemochromatosis protein homolog [Sus scrofa].
Length = 355
Score = 89.0 bits (219), Expect = 5e-18
Identities = 70/265 (26%), Positives = 119/265 (44%), Gaps = 13/265 (4%)
Frame = +1
Query: 181 DGLGWVGELQAYTWRNDSDTIVFLKPWSQGTLSDQLANQLQHIFKGYRSSFTRDI----- 345
+ LG+V + ++ ++S PW G S+QL QL KG+ FT D
Sbjct: 48 EALGYVDDQLFVSYNHESRRAEPRAPWLSGKASNQLWLQLSQSLKGWDHMFTVDFWTIMD 107
Query: 346 ----REFVKMLGSDYPFEIQISAGCEVLSGNSSESFLHTAFQGTDIMSF--QGTSWVSAP 507
+ K+ +Q+ GCEV + NS+ F + G D + F + W A
Sbjct: 108 NHNYSKITKLGVLPESHTLQVILGCEVQADNSTRGFWKYGYDGQDHLEFHPETLDW-GAA 166
Query: 508 DAPPWMQRVCRVLNEDQGTKETVQWLLYDICPQFVRGVLETGKSELEKQVKPEAWLSSGP 687
+ W ++ +++ + K+ +L D CP+ +R +LE G+ L++Q P ++
Sbjct: 167 EPRAWATKLEWEVSKIRA-KQNRAYLERD-CPEQLRRLLELGRGALDQQAPPLVKVTHHV 224
Query: 688 TPGPGRLLLVCHVSGFYPKPVWVMWMRGEQ--EQPGTQQGDILPHADGTWYLRVTLDVAA 861
L C FYP+ + + W++ Q + + D+LP+ DGT+ V L V
Sbjct: 225 ASAVTTLR--CQALNFYPQNITMRWLKDRQPLDAKDIEPRDVLPNGDGTYQSWVALVVLP 282
Query: 862 GEASGLSCRVKHSSLGDQDIILYWD 936
GE SC+V+H L DQ + W+
Sbjct: 283 GEEQRYSCQVEHPGL-DQPLTARWE 306
>ref|XP_003130402.1| PREDICTED: major histocompatibility complex class I-related gene
protein-like isoform 1 [Sus scrofa].
Length = 337
Score = 83.2 bits (204), Expect = 3e-16
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 4/218 (1%)
Frame = +1
Query: 256 PWSQGTLSDQLANQLQHIFKGYRSSFTRDIREFVKMLGSDYPFEIQISAGCEVLSGNSSE 435
PW L + + +G++ +F ++++ + Q GCE+L S+
Sbjct: 63 PWMAENLEPDHWERYTQLLRGWQQTFKAELKQLQRHYNHSGLHTYQRMIGCELLEDGSTT 122
Query: 436 SFLHTAFQGTDIMSFQGT--SWVSAPDAPPWMQRVCRV-LNEDQGTKETVQWLLYDICPQ 606
FL A+ G D + F SW++ + ++ +E Q K WL + C
Sbjct: 123 GFLQYAYDGQDFIIFNKDTLSWMAVDNVAHITKQAWEANWHELQYQKN---WLEQE-CVA 178
Query: 607 FVRGVLETGKSELEKQVKPEAWLSSGPTPGPGRLLLVCHVSGFYPKPVWVMWMRGEQEQ- 783
++R LE GK L++ P + T PG L C GFYP + + WM+ E+E
Sbjct: 179 WLRRFLEYGKDTLQRTEPPLVRVYHKETV-PGITTLYCRAHGFYPPEISMTWMKNEEEMV 237
Query: 784 PGTQQGDILPHADGTWYLRVTLDVAAGEASGLSCRVKH 897
GDILP DGT+ V++++ + + SC VKH
Sbjct: 238 QEMDYGDILPSGDGTYQTWVSVELDSQSSDVYSCHVKH 275
>ref|NP_001107175.1| MHC class I antigen 8 [Sus scrofa].
Length = 355
Score = 73.6 bits (179), Expect = 2e-13
Identities = 72/312 (23%), Positives = 125/312 (40%), Gaps = 10/312 (3%)
Frame = +1
Query: 31 LPFVLLWGLPQIWGNSEGSSDLHSLPASPRFFPLRCLQISSFANSSWTRTDGLGWVGELQ 210
L VLL L + W S H++ + P + R L++ ++ + R D +
Sbjct: 6 LLLVLLGALTETWAGSHSMRYFHTVVSRPGYGEPRYLEVGYVDDTQFVRFDS-------E 58
Query: 211 AYTWRNDSDTIVFLKPWSQGTLSDQLANQLQHIFKGYRSSFTRDIREFVKMLGSDY---- 378
A R + PW + + + Q + ++ R + +L Y
Sbjct: 59 AQNPRMEPRA-----PWVEQEGQEYWDEETQRV-----KDLVQNFRRNLMILRGYYNQSE 108
Query: 379 --PFEIQISAGCEVLS-GNSSESFLHTAFQGTDIMSFQG--TSWVSAPDAPPWMQRVCRV 543
Q++ GCE S G A+ G D ++ +SW +A A QR
Sbjct: 109 TGSHTFQLTYGCEEGSHGRPLHVHWQYAYDGEDYITLNEDLSSWTAADMAARVTQRKW-- 166
Query: 544 LNEDQGTKETVQWLLYDICPQFVRGVLETGKSELEKQVKPEAWLSSGPTPGPGRLLLVCH 723
+ E + L C +++R LE G+ L++ P+A+++ P+ ++ L C
Sbjct: 167 --DKSRAHERFKSYLEGTCVEWLRRYLENGREMLQRADPPKAYVTCHPS-SDNKVTLRCW 223
Query: 724 VSGFYPKPVWVMWMR-GEQEQPGTQQGDILPHADGTWYLRVTLDVAAGEASGLSCRVKHS 900
GFYPK + + W R G+ + + + P DGT+ L V GE +C VKH
Sbjct: 224 ALGFYPKEISLTWRREGQDQSQDVEVVETRPSGDGTFQKWAALVVPPGEEQSYTCHVKHE 283
Query: 901 SLGDQDIILYWD 936
L + + L W+
Sbjct: 284 GL-QEPLTLRWE 294
>ref|NP_999362.2| igG receptor FcRn large subunit p51 [Sus scrofa].
Length = 356
Score = 73.2 bits (178), Expect = 3e-13
Identities = 77/297 (25%), Positives = 117/297 (39%), Gaps = 18/297 (6%)
Frame = +1
Query: 190 GWVGELQAYTWRNDSDTIVFLKPWSQGTLSDQLANQLQHIFKGYRSSFTRDIR------- 348
GW+G Q ++ N +P+ Q++ Y T D+R
Sbjct: 51 GWLGPQQYLSYNN---LRAQAEPYGAWVWESQVS--------WYWEKETADLRNKQKLFL 99
Query: 349 EFVKMLGSDYPFEIQISAGCEVLSGNSSESFLHTAFQGTDIMSFQ---GTSWVSAPDA-- 513
E +K L PF +Q GCE+ N S A G + M F GT P+A
Sbjct: 100 EALKTLEEGGPFTLQGLLGCELGPDNVSVPVATFALNGEEFMKFDTKLGTWDGEWPEART 159
Query: 514 --PPWMQRVCRVLNEDQGTKETVQWLLYDICPQFVRGVLETGKSELEKQVKPEAWLSSGP 687
WMQ E + +LLY CP + G LE G+ LE + P + + P
Sbjct: 160 IGSKWMQ-------EPDAVNKEKTFLLYS-CPHRLLGHLERGRGNLEWKEPPSMRMKARP 211
Query: 688 TPGPGRLLLVCHVSGFYPKPVWVMWMRGEQEQPGTQQGDILPHADGTWYLRVTLDVAAGE 867
PG +L C FYP + + ++R G+ + DI P+ DG+++ +L V +G+
Sbjct: 212 GTAPGFSVLTCIAFSFYPPELQLRFLRNGL-AAGSGESDIGPNGDGSFHAWSSLTVKSGD 270
Query: 868 ASGLSCRVKHSSLGDQ-DIILYWDXXXXXXXXXXXXAFILVL---GGSFAFWFRRRR 1026
C V+H+ L + L F+L+L GG W R R+
Sbjct: 271 EHHYCCVVQHAGLAQPLTVELESPAKSSMPVVGIMVGFLLLLIVAGGGALLWRRMRK 327
>ref|XP_003127363.1| PREDICTED: IgG receptor FcRn large subunit p51-like [Sus scrofa].
Length = 406
Score = 71.2 bits (173), Expect = 1e-12
Identities = 67/245 (27%), Positives = 101/245 (41%), Gaps = 13/245 (5%)
Frame = +1
Query: 331 FTRDIREFVKMLGSDY--PFEIQISAGCEVLSGNSSESFLHTAFQGTDIMSFQ---GTSW 495
F ++ K +G D PF +Q GCE+ N S A G + M F GT
Sbjct: 142 FLEALKTLEKEVGLDPGGPFTLQGLLGCELGPDNVSVPVATFALNGEEFMKFDTKLGTWD 201
Query: 496 VSAPDA----PPWMQRVCRVLNEDQGTKETVQWLLYDICPQFVRGVLETGKSELEKQVKP 663
P+A WMQ E + +LLY CP + G LE G+ LE + P
Sbjct: 202 GEWPEARTIGSKWMQ-------EPDAVNKEKTFLLYS-CPHRLLGHLERGRGNLEWKEPP 253
Query: 664 EAWLSSGPTPGPGRLLLVCHVSGFYPKPVWVMWMRGEQEQPGTQQGDILPHADGTWYLRV 843
+ + P PG +L C FYP + + ++R G+ + DI P+ DG+++
Sbjct: 254 SMRMKARPGTAPGFSVLTCIAFSFYPPELQLRFLRNGL-AAGSGESDIGPNGDGSFHAWS 312
Query: 844 TLDVAAGEASGLSCRVKHSSLGDQ-DIILYWDXXXXXXXXXXXXAFILVL---GGSFAFW 1011
+L V +G+ C V+H+ L + L F+L+L GG W
Sbjct: 313 SLTVKSGDEHHYCCVVQHAGLAQPLTVELESPAKSSMPVVGIMVGFLLLLIVAGGGALLW 372
Query: 1012 FRRRR 1026
R R+
Sbjct: 373 RRMRK 377
Database: RefSeq44_SP.fasta
Posted date: Nov 15, 2010 4:36 PM
Number of letters in database: 9,542,844
Number of sequences in database: 20,576
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 20576
Number of Hits to DB: 31,907,954
Number of extensions: 956416
Number of successful extensions: 3733
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 3694
Number of HSP's successfully gapped: 29
Length of query: 456
Length of database: 9,542,844
Length adjustment: 101
Effective length of query: 355
Effective length of database: 7,464,668
Effective search space: 2649957140
Effective search space used: 2649957140
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)