Animal-Genome cDNA 20110601C-000068

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000068
         (1592 letters)

Database: RefSeq49_BP.fasta 
           33,088 sequences; 17,681,374 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001070264.1| amyloid beta A4 protein [Bos taurus].             570   e-162
Alignment   gi|XP_002699281.1| PREDICTED: amyloid beta (A4) precursor-like ...   379   e-105
Alignment   gi|XP_001251235.1| PREDICTED: amyloid beta (A4) precursor-like ...   379   e-105
Alignment   gi|NP_001033184.1| amyloid-like protein 1 [Bos taurus].              213   3e-55
Alignment   gi|NP_001039436.1| kunitz-type protease inhibitor 2 [Bos taurus].     69   2e-11
Alignment   gi|NP_001070530.1| eppin [Bos taurus].                                67   4e-11
Alignment   gi|NP_001001554.2| pancreatic trypsin inhibitor precursor [Bos ...    65   1e-10
Alignment   gi|XP_002692379.1| PREDICTED: tissue factor pathway inhibitor-l...    62   1e-09
Alignment   gi|XP_002701177.1| PREDICTED: tissue factor pathway inhibitor-l...    62   1e-09
Alignment   gi|XP_002685288.1| PREDICTED: tissue factor pathway inhibitor (...    62   2e-09

>ref|NP_001070264.1| amyloid beta A4 protein [Bos taurus].
          Length = 695

 Score =  570 bits (1469), Expect = e-162
 Identities = 285/292 (97%), Positives = 288/292 (98%)
 Frame = +1

Query: 715  IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL 894
            +PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL
Sbjct: 289  VPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL 348

Query: 895  PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV 1074
            PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV
Sbjct: 349  PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV 408

Query: 1075 PPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ 1254
            PPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ
Sbjct: 409  PPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ 468

Query: 1255 SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTT 1434
            SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLAN+ISEPRISYGNDALMPSLTETKTT
Sbjct: 469  SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANIISEPRISYGNDALMPSLTETKTT 528

Query: 1435 VELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPCDARPCSRRRLTTRPG 1590
            VELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEP DARP + R LTTRPG
Sbjct: 529  VELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPG 580



 Score =  219 bits (559), Expect = 4e-57
 Identities = 106/162 (65%), Positives = 108/162 (66%)
 Frame = +1

Query: 1   THTHIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 180
           TH H+ IPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH
Sbjct: 107 THAHMVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 166

Query: 181 DYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVV 360
           DYGMLLPCGIDKFRGVEFVCCPL                  VWWGGADTDYADGSEDKV+
Sbjct: 167 DYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVI 226

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEATER 486
                                             PYEEATER
Sbjct: 227 EVAEEEEVADVEEEEADDEEDDEDGEELEEEAEEPYEEATER 268


>ref|XP_002699281.1| PREDICTED: amyloid beta (A4) precursor-like protein 2 [Bos taurus].
          Length = 767

 Score =  379 bits (973), Expect = e-105
 Identities = 195/332 (58%), Positives = 249/332 (75%), Gaps = 3/332 (0%)
 Frame = +1

Query: 553  CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVIPTTAA 732
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC ++IP T  
Sbjct: 314  CSQEALTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKAMIPPTPL 373

Query: 733  STPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKK 912
             T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V +EWEEAE QAKNLPKA+++
Sbjct: 374  PTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQ 432

Query: 913  AVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRH 1092
             +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR+ALENY+ ALQ+ PPRP  
Sbjct: 433  TLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRVALENYLAALQSDPPRPHR 492

Query: 1093 VFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLY 1272
            +   L++YVRAE KDR HTL+H++HV  VDP+KAAQ+RSQVMTHL VI ER NQSLSLLY
Sbjct: 493  ILQALRRYVRAENKDRLHTLRHYQHVLAVDPEKAAQMRSQVMTHLHVIEERRNQSLSLLY 552

Query: 1273 NVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPV 1452
             VP VA+EIQ+E+DELLQ+++       A+M          D    S +ET   V    V
Sbjct: 553  KVPYVAQEIQEEIDELLQEQR-------ADM----------DQFSSSFSETPVDVR---V 592

Query: 1453 NGEFSLDDLQPW---HPFGVDSVPANTENEVE 1539
            + E S D++ P+   HPF   S+P N +++ E
Sbjct: 593  SSEES-DEIPPFHSLHPF--PSLPENEDSQPE 621



 Score =  126 bits (317), Expect = 5e-29
 Identities = 51/80 (63%), Positives = 62/80 (77%)
 Frame = +1

Query: 7   THIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDY 186
           +HI IP++CLVGEFVSD LLVP+KC F H+ERM+VCE H  WHTV KE C  +   L+ Y
Sbjct: 125 SHIVIPFKCLVGEFVSDVLLVPEKCLFFHKERMEVCENHQRWHTVVKEACLTQEMTLYSY 184

Query: 187 GMLLPCGIDKFRGVEFVCCP 246
            MLLPCG+D+F G E+VCCP
Sbjct: 185 SMLLPCGVDQFHGTEYVCCP 204


>ref|XP_001251235.1| PREDICTED: amyloid beta (A4) precursor-like protein 2 [Bos taurus].
          Length = 767

 Score =  379 bits (973), Expect = e-105
 Identities = 195/332 (58%), Positives = 249/332 (75%), Gaps = 3/332 (0%)
 Frame = +1

Query: 553  CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVIPTTAA 732
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC ++IP T  
Sbjct: 314  CSQEALTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKAMIPPTPL 373

Query: 733  STPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKK 912
             T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V +EWEEAE QAKNLPKA+++
Sbjct: 374  PTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQ 432

Query: 913  AVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRH 1092
             +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR+ALENY+ ALQ+ PPRP  
Sbjct: 433  TLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRVALENYLAALQSDPPRPHR 492

Query: 1093 VFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLY 1272
            +   L++YVRAE KDR HTL+H++HV  VDP+KAAQ+RSQVMTHL VI ER NQSLSLLY
Sbjct: 493  ILQALRRYVRAENKDRLHTLRHYQHVLAVDPEKAAQMRSQVMTHLHVIEERRNQSLSLLY 552

Query: 1273 NVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPV 1452
             VP VA+EIQ+E+DELLQ+++       A+M          D    S +ET   V    V
Sbjct: 553  KVPYVAQEIQEEIDELLQEQR-------ADM----------DQFSSSFSETPVDVR---V 592

Query: 1453 NGEFSLDDLQPW---HPFGVDSVPANTENEVE 1539
            + E S D++ P+   HPF   S+P N +++ E
Sbjct: 593  SSEES-DEIPPFHSLHPF--PSLPENEDSQPE 621



 Score =  126 bits (317), Expect = 5e-29
 Identities = 51/80 (63%), Positives = 62/80 (77%)
 Frame = +1

Query: 7   THIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDY 186
           +HI IP++CLVGEFVSD LLVP+KC F H+ERM+VCE H  WHTV KE C  +   L+ Y
Sbjct: 125 SHIVIPFKCLVGEFVSDVLLVPEKCLFFHKERMEVCENHQRWHTVVKEACLTQEMTLYSY 184

Query: 187 GMLLPCGIDKFRGVEFVCCP 246
            MLLPCG+D+F G E+VCCP
Sbjct: 185 SMLLPCGVDQFHGTEYVCCP 204


>ref|NP_001033184.1| amyloid-like protein 1 [Bos taurus].
          Length = 642

 Score =  213 bits (543), Expect = 3e-55
 Identities = 101/197 (51%), Positives = 146/197 (74%)
 Frame = +1

Query: 742  DAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVI 921
            D VD Y   PG+ +EH  F +AK  LE +   ++++VMREW  A+ Q+KNLPKAD++A+ 
Sbjct: 287  DGVDVYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKADRQALN 346

Query: 922  QHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFN 1101
            +HFQ  +++LE++ + ERQ+LVETH  RV A++ND+RR ALE ++ ALQ  PP+P  V  
Sbjct: 347  EHFQSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQGDPPQPERVLL 406

Query: 1102 MLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVP 1281
             L++Y+RAEQK+++HTL+H++HV  VDP+KA Q+R QV THL+VI ERMNQSL LL   P
Sbjct: 407  ALRRYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVQTHLQVIEERMNQSLGLLDQNP 466

Query: 1282 AVAEEIQDEVDELLQKE 1332
             +A+E++ ++ ELL  E
Sbjct: 467  RLAQELRPQIQELLHSE 483



 Score =  110 bits (274), Expect = 5e-24
 Identities = 48/79 (60%), Positives = 58/79 (73%)
 Frame = +1

Query: 10  HIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYG 189
           H  +P+ CL GEFVS+ALLVP+ C+FLHQERMD CE+       A+E CS +   LH  G
Sbjct: 127 HQVVPFHCLPGEFVSEALLVPEGCRFLHQERMDQCESSARRQQEAQEACSSQGLILHGSG 186

Query: 190 MLLPCGIDKFRGVEFVCCP 246
           MLLPCG D+FRGVE+VCCP
Sbjct: 187 MLLPCGADRFRGVEYVCCP 205


>ref|NP_001039436.1| kunitz-type protease inhibitor 2 [Bos taurus].
          Length = 250

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 27/51 (52%), Positives = 33/51 (64%)
 Frame = +1

Query: 553 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 705
           C  +A TGPCRA   RWYF+  E  C  F YGGC GN+NN+ ++E CM  C
Sbjct: 131 CIAKAVTGPCRAAFPRWYFNAEENSCDNFIYGGCRGNKNNYRSKEECMQQC 181



 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 26/58 (44%), Positives = 34/58 (58%)
 Frame = +1

Query: 553 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVIPTT 726
           C    + G CRA   RW+++VT+G C  F YGGC  N NN+ T+E C+A C  V   T
Sbjct: 38  CHLPKKVGRCRASFPRWWYNVTDGSCQQFVYGGCDRNDNNYMTKEECLAKCAGVTENT 95


>ref|NP_001070530.1| eppin [Bos taurus].
          Length = 134

 Score = 67.0 bits (162), Expect = 4e-11
 Identities = 24/53 (45%), Positives = 32/53 (60%)
 Frame = +1

Query: 553 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGS 711
           CS   E GPC A+  RW++D T   C+ F YGGC GN NNF ++  C + C +
Sbjct: 77  CSMPKEAGPCMALFHRWWYDKTNNSCSSFIYGGCRGNNNNFQSQAVCQSACSA 129


>ref|NP_001001554.2| pancreatic trypsin inhibitor precursor [Bos taurus].
          Length = 100

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 26/55 (47%), Positives = 33/55 (60%)
 Frame = +1

Query: 553 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVI 717
           C E   TGPC+A + R++++   G C PF YGGC   RNNF + E CM  CG  I
Sbjct: 40  CLEPPYTGPCKARMIRYFYNAKAGLCQPFVYGGCRAKRNNFKSSEDCMRTCGGAI 94


>ref|XP_002692379.1| PREDICTED: tissue factor pathway inhibitor-like [Bos taurus].
          Length = 158

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 23/51 (45%), Positives = 32/51 (62%)
 Frame = +1

Query: 553 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 705
           C      GPC+A + R++++ T   C PF YGGC GN NNF+T E C+ +C
Sbjct: 44  CQLPQARGPCKAALLRYFYNSTSNACEPFTYGGCQGNDNNFETTEMCLRIC 94


>ref|XP_002701177.1| PREDICTED: tissue factor pathway inhibitor-like [Bos taurus].
          Length = 158

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 23/51 (45%), Positives = 32/51 (62%)
 Frame = +1

Query: 553 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 705
           C      GPC+A + R++++ T   C PF YGGC GN NNF+T E C+ +C
Sbjct: 44  CQLPQARGPCKAALLRYFYNSTSNACEPFTYGGCQGNDNNFETTEMCLRIC 94


>ref|XP_002685288.1| PREDICTED: tissue factor pathway inhibitor (lipoprotein-associated
           coagulation inhibitor) isoform 2 [Bos taurus].
          Length = 304

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 25/68 (36%), Positives = 37/68 (54%)
 Frame = +1

Query: 553 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVIPTTAA 732
           C+ + + GPC+AMI R++F++   +C  F YGGC GN+N F+T E C   C    P    
Sbjct: 50  CAMRVDDGPCKAMIKRFFFNIHTQQCEEFIYGGCKGNQNRFETLEECKQKCTRDYPKNTR 109

Query: 733 STPDAVDK 756
                + K
Sbjct: 110 KMKTTLQK 117



 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 22/51 (43%), Positives = 32/51 (62%)
 Frame = +1

Query: 553 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 705
           C   A+ G C+A ++R+Y++   G C PF Y GCGGN NNF + + C+  C
Sbjct: 216 CLTPADRGLCQANVTRFYYNSVIGNCLPFKYSGCGGNENNFTSRKACVRAC 266



 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 21/51 (41%), Positives = 30/51 (58%)
 Frame = +1

Query: 553 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 705
           C  + +TG CR  I R++++    +C  F YGGC GN NNF++ E C   C
Sbjct: 123 CFLEEDTGICRGYIIRYFYNNQSKQCERFTYGGCLGNLNNFESLEECKNTC 173


  Database: RefSeq49_BP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 17,681,374
  Number of sequences in database:  33,088
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33088
Number of Hits to DB: 55,781,152
Number of extensions: 1537728
Number of successful extensions: 6243
Number of sequences better than 1.0e-05: 45
Number of HSP's gapped: 6145
Number of HSP's successfully gapped: 62
Length of query: 530
Length of database: 17,681,374
Length adjustment: 107
Effective length of query: 423
Effective length of database: 14,140,958
Effective search space: 5981625234
Effective search space used: 5981625234
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000068
         (1592 letters)

Database: RefSeq49_CP.fasta 
           33,336 sequences; 18,874,504 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001006601.1| amyloid beta A4 protein [Canis lupus familia...   889   0.0  
Alignment   gi|XP_536530.2| PREDICTED: similar to Amyloid-like protein 2 pr...   382   e-106
Alignment   gi|XP_856696.1| PREDICTED: similar to Amyloid-like protein 2 pr...   382   e-106
Alignment   gi|XP_856617.1| PREDICTED: similar to Amyloid-like protein 2 pr...   382   e-106
Alignment   gi|XP_856859.1| PREDICTED: similar to Amyloid-like protein 2 pr...   382   e-106
Alignment   gi|XP_856781.1| PREDICTED: similar to Amyloid-like protein 2 pr...   382   e-106
Alignment   gi|XP_855958.1| PREDICTED: similar to Amyloid-like protein 2 pr...   382   e-106
Alignment   gi|XP_856451.1| PREDICTED: similar to Amyloid-like protein 2 pr...   377   e-104
Alignment   gi|XP_856494.1| PREDICTED: similar to Amyloid-like protein 2 pr...   374   e-103
Alignment   gi|XP_856283.1| PREDICTED: similar to Amyloid-like protein 2 pr...   374   e-103

>ref|NP_001006601.1| amyloid beta A4 protein [Canis lupus familiaris].
          Length = 770

 Score =  889 bits (2297), Expect = 0.0
 Identities = 447/549 (81%), Positives = 450/549 (81%), Gaps = 19/549 (3%)
 Frame = +1

Query: 1    THTHIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 180
            TH HI IPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH
Sbjct: 107  THAHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 166

Query: 181  DYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVV 360
            DYGMLLPCGIDKFRGVEFVCCPL                  VWWGGADTDYADGSEDKVV
Sbjct: 167  DYGMLLPCGIDKFRGVEFVCCPLAEESDNIDSADAEEDDSDVWWGGADTDYADGSEDKVV 226

Query: 361  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXX 540
                                              PYEEATER                  
Sbjct: 227  EVAEEEEVADVEEEEAEDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEV 286

Query: 541  XXXXCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSV-- 714
                CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSV  
Sbjct: 287  VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMS 346

Query: 715  -----------------IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM 843
                             +PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM
Sbjct: 347  QSLLKTTQEPLPQDAVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM 406

Query: 844  SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN 1023
            SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN
Sbjct: 407  SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN 466

Query: 1024 DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI 1203
            DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI
Sbjct: 467  DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI 526

Query: 1204 RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI 1383
            RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDD+LANMISEPRI
Sbjct: 527  RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDILANMISEPRI 586

Query: 1384 SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPCDARPCS 1563
            SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEP DARP +
Sbjct: 587  SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAA 646

Query: 1564 RRRLTTRPG 1590
             R LTTRPG
Sbjct: 647  DRGLTTRPG 655


>ref|XP_536530.2| PREDICTED: similar to Amyloid-like protein 2 precursor (Amyloid
            protein homolog) (APPH) (CDEI-box binding protein)
            (CDEBP) isoform 1 [Canis familiaris].
          Length = 763

 Score =  382 bits (982), Expect = e-106
 Identities = 193/330 (58%), Positives = 249/330 (75%), Gaps = 1/330 (0%)
 Frame = +1

Query: 553  CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVIPTTAA 732
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC ++IP T  
Sbjct: 310  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKTMIPPTPL 369

Query: 733  STPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKK 912
             T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V +EWEEAE QAKNLPKA+++
Sbjct: 370  PTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQ 428

Query: 913  AVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRH 1092
             +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR+ALENY+ ALQ+ PPRP  
Sbjct: 429  TLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRMALENYLAALQSDPPRPHR 488

Query: 1093 VFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLY 1272
            +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQVMTHL VI ER NQSLSLLY
Sbjct: 489  ILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLY 548

Query: 1273 NVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPV 1452
             VP VA+EIQ+E+DELLQ+++       A+M          D    S++ET   V    V
Sbjct: 549  KVPYVAQEIQEEIDELLQEQR-------ADM----------DQFTASISETPVDVR---V 588

Query: 1453 NGEFSLDDLQPWHPF-GVDSVPANTENEVE 1539
            + E S D++ P+HPF    S+P N + + E
Sbjct: 589  SSEES-DEIPPFHPFHPFPSLPENEDTQRE 617



 Score =  131 bits (329), Expect = 2e-30
 Identities = 51/80 (63%), Positives = 65/80 (81%)
 Frame = +1

Query: 7   THIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDY 186
           TH+ +P++CLVGEFVSD LLVP+KC+F H+E+M+VCE H HWHTV KE C  +   L+ Y
Sbjct: 125 THVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVVKEACLAQGMTLYRY 184

Query: 187 GMLLPCGIDKFRGVEFVCCP 246
           GMLLPCG+D+F G E+VCCP
Sbjct: 185 GMLLPCGVDRFHGTEYVCCP 204


>ref|XP_856696.1| PREDICTED: similar to Amyloid-like protein 2 precursor (Amyloid
            protein homolog) (APPH) (CDEI-box binding protein)
            (CDEBP) isoform 22 [Canis familiaris].
          Length = 767

 Score =  382 bits (982), Expect = e-106
 Identities = 193/330 (58%), Positives = 249/330 (75%), Gaps = 1/330 (0%)
 Frame = +1

Query: 553  CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVIPTTAA 732
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC ++IP T  
Sbjct: 314  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKTMIPPTPL 373

Query: 733  STPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKK 912
             T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V +EWEEAE QAKNLPKA+++
Sbjct: 374  PTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQ 432

Query: 913  AVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRH 1092
             +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR+ALENY+ ALQ+ PPRP  
Sbjct: 433  TLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRMALENYLAALQSDPPRPHR 492

Query: 1093 VFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLY 1272
            +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQVMTHL VI ER NQSLSLLY
Sbjct: 493  ILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLY 552

Query: 1273 NVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPV 1452
             VP VA+EIQ+E+DELLQ+++       A+M          D    S++ET   V    V
Sbjct: 553  KVPYVAQEIQEEIDELLQEQR-------ADM----------DQFTASISETPVDVR---V 592

Query: 1453 NGEFSLDDLQPWHPF-GVDSVPANTENEVE 1539
            + E S D++ P+HPF    S+P N + + E
Sbjct: 593  SSEES-DEIPPFHPFHPFPSLPENEDTQRE 621



 Score =  131 bits (329), Expect = 2e-30
 Identities = 51/80 (63%), Positives = 65/80 (81%)
 Frame = +1

Query: 7   THIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDY 186
           TH+ +P++CLVGEFVSD LLVP+KC+F H+E+M+VCE H HWHTV KE C  +   L+ Y
Sbjct: 125 THVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVVKEACLAQGMTLYRY 184

Query: 187 GMLLPCGIDKFRGVEFVCCP 246
           GMLLPCG+D+F G E+VCCP
Sbjct: 185 GMLLPCGVDRFHGTEYVCCP 204


>ref|XP_856617.1| PREDICTED: similar to Amyloid-like protein 2 precursor (Amyloid
            protein homolog) (APPH) (CDEI-box binding protein)
            (CDEBP) isoform 20 [Canis familiaris].
          Length = 768

 Score =  382 bits (982), Expect = e-106
 Identities = 193/330 (58%), Positives = 249/330 (75%), Gaps = 1/330 (0%)
 Frame = +1

Query: 553  CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVIPTTAA 732
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC ++IP T  
Sbjct: 315  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKTMIPPTPL 374

Query: 733  STPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKK 912
             T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V +EWEEAE QAKNLPKA+++
Sbjct: 375  PTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQ 433

Query: 913  AVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRH 1092
             +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR+ALENY+ ALQ+ PPRP  
Sbjct: 434  TLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRMALENYLAALQSDPPRPHR 493

Query: 1093 VFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLY 1272
            +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQVMTHL VI ER NQSLSLLY
Sbjct: 494  ILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLY 553

Query: 1273 NVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPV 1452
             VP VA+EIQ+E+DELLQ+++       A+M          D    S++ET   V    V
Sbjct: 554  KVPYVAQEIQEEIDELLQEQR-------ADM----------DQFTASISETPVDVR---V 593

Query: 1453 NGEFSLDDLQPWHPF-GVDSVPANTENEVE 1539
            + E S D++ P+HPF    S+P N + + E
Sbjct: 594  SSEES-DEIPPFHPFHPFPSLPENEDTQRE 622



 Score =  131 bits (329), Expect = 2e-30
 Identities = 51/80 (63%), Positives = 65/80 (81%)
 Frame = +1

Query: 7   THIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDY 186
           TH+ +P++CLVGEFVSD LLVP+KC+F H+E+M+VCE H HWHTV KE C  +   L+ Y
Sbjct: 125 THVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVVKEACLAQGMTLYRY 184

Query: 187 GMLLPCGIDKFRGVEFVCCP 246
           GMLLPCG+D+F G E+VCCP
Sbjct: 185 GMLLPCGVDRFHGTEYVCCP 204


>ref|XP_856859.1| PREDICTED: similar to Amyloid-like protein 2 precursor (Amyloid
            protein homolog) (APPH) (CDEI-box binding protein)
            (CDEBP) isoform 26 [Canis familiaris].
          Length = 755

 Score =  382 bits (980), Expect = e-106
 Identities = 193/327 (59%), Positives = 247/327 (75%)
 Frame = +1

Query: 553  CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVIPTTAA 732
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC ++IP T  
Sbjct: 314  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKTMIPPTPL 373

Query: 733  STPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKK 912
             T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V +EWEEAE QAKNLPKA+++
Sbjct: 374  PTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQ 432

Query: 913  AVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRH 1092
             +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR+ALENY+ ALQ+ PPRP  
Sbjct: 433  TLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRMALENYLAALQSDPPRPHR 492

Query: 1093 VFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLY 1272
            +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQVMTHL VI ER NQSLSLLY
Sbjct: 493  ILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLY 552

Query: 1273 NVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPV 1452
             VP VA+EIQ+E+DELLQ+++       A+M          D    S++ET   V    V
Sbjct: 553  KVPYVAQEIQEEIDELLQEQR-------ADM----------DQFTASISETPVDVR---V 592

Query: 1453 NGEFSLDDLQPWHPFGVDSVPANTENE 1533
            + E S D++ P+HPF     P+  ENE
Sbjct: 593  SSEES-DEIPPFHPF--HPFPSLPENE 616



 Score =  131 bits (329), Expect = 2e-30
 Identities = 51/80 (63%), Positives = 65/80 (81%)
 Frame = +1

Query: 7   THIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDY 186
           TH+ +P++CLVGEFVSD LLVP+KC+F H+E+M+VCE H HWHTV KE C  +   L+ Y
Sbjct: 125 THVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVVKEACLAQGMTLYRY 184

Query: 187 GMLLPCGIDKFRGVEFVCCP 246
           GMLLPCG+D+F G E+VCCP
Sbjct: 185 GMLLPCGVDRFHGTEYVCCP 204


>ref|XP_856781.1| PREDICTED: similar to Amyloid-like protein 2 precursor (Amyloid
            protein homolog) (APPH) (CDEI-box binding protein)
            (CDEBP) isoform 24 [Canis familiaris].
          Length = 732

 Score =  382 bits (980), Expect = e-106
 Identities = 193/327 (59%), Positives = 247/327 (75%)
 Frame = +1

Query: 553  CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVIPTTAA 732
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC ++IP T  
Sbjct: 291  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKTMIPPTPL 350

Query: 733  STPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKK 912
             T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V +EWEEAE QAKNLPKA+++
Sbjct: 351  PTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQ 409

Query: 913  AVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRH 1092
             +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR+ALENY+ ALQ+ PPRP  
Sbjct: 410  TLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRMALENYLAALQSDPPRPHR 469

Query: 1093 VFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLY 1272
            +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQVMTHL VI ER NQSLSLLY
Sbjct: 470  ILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLY 529

Query: 1273 NVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPV 1452
             VP VA+EIQ+E+DELLQ+++       A+M          D    S++ET   V    V
Sbjct: 530  KVPYVAQEIQEEIDELLQEQR-------ADM----------DQFTASISETPVDVR---V 569

Query: 1453 NGEFSLDDLQPWHPFGVDSVPANTENE 1533
            + E S D++ P+HPF     P+  ENE
Sbjct: 570  SSEES-DEIPPFHPF--HPFPSLPENE 593



 Score =  131 bits (329), Expect = 2e-30
 Identities = 51/80 (63%), Positives = 65/80 (81%)
 Frame = +1

Query: 7   THIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDY 186
           TH+ +P++CLVGEFVSD LLVP+KC+F H+E+M+VCE H HWHTV KE C  +   L+ Y
Sbjct: 125 THVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVVKEACLAQGMTLYRY 184

Query: 187 GMLLPCGIDKFRGVEFVCCP 246
           GMLLPCG+D+F G E+VCCP
Sbjct: 185 GMLLPCGVDRFHGTEYVCCP 204


>ref|XP_855958.1| PREDICTED: similar to Amyloid-like protein 2 precursor (Amyloid
            protein homolog) (APPH) (CDEI-box binding protein)
            (CDEBP) isoform 4 [Canis familiaris].
          Length = 751

 Score =  382 bits (980), Expect = e-106
 Identities = 193/327 (59%), Positives = 247/327 (75%)
 Frame = +1

Query: 553  CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVIPTTAA 732
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC ++IP T  
Sbjct: 310  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKTMIPPTPL 369

Query: 733  STPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKK 912
             T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V +EWEEAE QAKNLPKA+++
Sbjct: 370  PTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQ 428

Query: 913  AVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRH 1092
             +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR+ALENY+ ALQ+ PPRP  
Sbjct: 429  TLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRMALENYLAALQSDPPRPHR 488

Query: 1093 VFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLY 1272
            +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQVMTHL VI ER NQSLSLLY
Sbjct: 489  ILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLY 548

Query: 1273 NVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPV 1452
             VP VA+EIQ+E+DELLQ+++       A+M          D    S++ET   V    V
Sbjct: 549  KVPYVAQEIQEEIDELLQEQR-------ADM----------DQFTASISETPVDVR---V 588

Query: 1453 NGEFSLDDLQPWHPFGVDSVPANTENE 1533
            + E S D++ P+HPF     P+  ENE
Sbjct: 589  SSEES-DEIPPFHPF--HPFPSLPENE 612



 Score =  131 bits (329), Expect = 2e-30
 Identities = 51/80 (63%), Positives = 65/80 (81%)
 Frame = +1

Query: 7   THIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDY 186
           TH+ +P++CLVGEFVSD LLVP+KC+F H+E+M+VCE H HWHTV KE C  +   L+ Y
Sbjct: 125 THVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVVKEACLAQGMTLYRY 184

Query: 187 GMLLPCGIDKFRGVEFVCCP 246
           GMLLPCG+D+F G E+VCCP
Sbjct: 185 GMLLPCGVDRFHGTEYVCCP 204


>ref|XP_856451.1| PREDICTED: similar to Amyloid-like protein 2 precursor (Amyloid
            protein homolog) (APPH) (CDEI-box binding protein)
            (CDEBP) isoform 16 [Canis familiaris].
          Length = 764

 Score =  377 bits (969), Expect = e-104
 Identities = 192/331 (58%), Positives = 249/331 (75%), Gaps = 2/331 (0%)
 Frame = +1

Query: 553  CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSV-IPTTA 729
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC ++ +P T 
Sbjct: 310  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKTMTVPPTP 369

Query: 730  ASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADK 909
              T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V +EWEEAE QAKNLPKA++
Sbjct: 370  LPTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAER 428

Query: 910  KAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPR 1089
            + +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR+ALENY+ ALQ+ PPRP 
Sbjct: 429  QTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRMALENYLAALQSDPPRPH 488

Query: 1090 HVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLL 1269
             +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQVMTHL VI ER NQSLSLL
Sbjct: 489  RILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLL 548

Query: 1270 YNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLP 1449
            Y VP VA+EIQ+E+DELLQ+++       A+M          D    S++ET   V    
Sbjct: 549  YKVPYVAQEIQEEIDELLQEQR-------ADM----------DQFTASISETPVDVR--- 588

Query: 1450 VNGEFSLDDLQPWHPF-GVDSVPANTENEVE 1539
            V+ E S D++ P+HPF    S+P N + + E
Sbjct: 589  VSSEES-DEIPPFHPFHPFPSLPENEDTQRE 618



 Score =  131 bits (329), Expect = 2e-30
 Identities = 51/80 (63%), Positives = 65/80 (81%)
 Frame = +1

Query: 7   THIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDY 186
           TH+ +P++CLVGEFVSD LLVP+KC+F H+E+M+VCE H HWHTV KE C  +   L+ Y
Sbjct: 125 THVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVVKEACLAQGMTLYRY 184

Query: 187 GMLLPCGIDKFRGVEFVCCP 246
           GMLLPCG+D+F G E+VCCP
Sbjct: 185 GMLLPCGVDRFHGTEYVCCP 204


>ref|XP_856494.1| PREDICTED: similar to Amyloid-like protein 2 precursor (Amyloid
            protein homolog) (APPH) (CDEI-box binding protein)
            (CDEBP) isoform 17 [Canis familiaris].
          Length = 773

 Score =  374 bits (960), Expect = e-103
 Identities = 192/340 (56%), Positives = 249/340 (73%), Gaps = 11/340 (3%)
 Frame = +1

Query: 553  CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSV------ 714
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC ++      
Sbjct: 310  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKTMSKEPLL 369

Query: 715  ----IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQ 882
                +P T   T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V +EWEEAE Q
Sbjct: 370  SFVSVPPTPLPTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQ 428

Query: 883  AKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITA 1062
            AKNLPKA+++ +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR+ALENY+ A
Sbjct: 429  AKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRMALENYLAA 488

Query: 1063 LQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYE 1242
            LQ+ PPRP  +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQVMTHL VI E
Sbjct: 489  LQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEE 548

Query: 1243 RMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTE 1422
            R NQSLSLLY VP VA+EIQ+E+DELLQ+++       A+M          D    S++E
Sbjct: 549  RRNQSLSLLYKVPYVAQEIQEEIDELLQEQR-------ADM----------DQFTASISE 591

Query: 1423 TKTTVELLPVNGEFSLDDLQPWHPF-GVDSVPANTENEVE 1539
            T   V    V+ E S D++ P+HPF    S+P N + + E
Sbjct: 592  TPVDVR---VSSEES-DEIPPFHPFHPFPSLPENEDTQRE 627



 Score =  131 bits (329), Expect = 2e-30
 Identities = 51/80 (63%), Positives = 65/80 (81%)
 Frame = +1

Query: 7   THIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDY 186
           TH+ +P++CLVGEFVSD LLVP+KC+F H+E+M+VCE H HWHTV KE C  +   L+ Y
Sbjct: 125 THVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVVKEACLAQGMTLYRY 184

Query: 187 GMLLPCGIDKFRGVEFVCCP 246
           GMLLPCG+D+F G E+VCCP
Sbjct: 185 GMLLPCGVDRFHGTEYVCCP 204


>ref|XP_856283.1| PREDICTED: similar to Amyloid-like protein 2 precursor (Amyloid
            protein homolog) (APPH) (CDEI-box binding protein)
            (CDEBP) isoform 12 [Canis familiaris].
          Length = 777

 Score =  374 bits (960), Expect = e-103
 Identities = 192/340 (56%), Positives = 249/340 (73%), Gaps = 11/340 (3%)
 Frame = +1

Query: 553  CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSV------ 714
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC ++      
Sbjct: 314  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKTMSKEPLL 373

Query: 715  ----IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQ 882
                +P T   T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V +EWEEAE Q
Sbjct: 374  SFVSVPPTPLPTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQ 432

Query: 883  AKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITA 1062
            AKNLPKA+++ +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR+ALENY+ A
Sbjct: 433  AKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRMALENYLAA 492

Query: 1063 LQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYE 1242
            LQ+ PPRP  +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQVMTHL VI E
Sbjct: 493  LQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEE 552

Query: 1243 RMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTE 1422
            R NQSLSLLY VP VA+EIQ+E+DELLQ+++       A+M          D    S++E
Sbjct: 553  RRNQSLSLLYKVPYVAQEIQEEIDELLQEQR-------ADM----------DQFTASISE 595

Query: 1423 TKTTVELLPVNGEFSLDDLQPWHPF-GVDSVPANTENEVE 1539
            T   V    V+ E S D++ P+HPF    S+P N + + E
Sbjct: 596  TPVDVR---VSSEES-DEIPPFHPFHPFPSLPENEDTQRE 631



 Score =  131 bits (329), Expect = 2e-30
 Identities = 51/80 (63%), Positives = 65/80 (81%)
 Frame = +1

Query: 7   THIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDY 186
           TH+ +P++CLVGEFVSD LLVP+KC+F H+E+M+VCE H HWHTV KE C  +   L+ Y
Sbjct: 125 THVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVVKEACLAQGMTLYRY 184

Query: 187 GMLLPCGIDKFRGVEFVCCP 246
           GMLLPCG+D+F G E+VCCP
Sbjct: 185 GMLLPCGVDRFHGTEYVCCP 204


  Database: RefSeq49_CP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,874,504
  Number of sequences in database:  33,336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33336
Number of Hits to DB: 57,323,728
Number of extensions: 1449283
Number of successful extensions: 6809
Number of sequences better than 1.0e-05: 41
Number of HSP's gapped: 6693
Number of HSP's successfully gapped: 71
Length of query: 530
Length of database: 18,874,504
Length adjustment: 107
Effective length of query: 423
Effective length of database: 15,307,552
Effective search space: 6475094496
Effective search space used: 6475094496
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000068
         (1592 letters)

Database: RefSeq49_HP.fasta 
           32,964 sequences; 18,297,164 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001129488.1| amyloid beta A4 protein isoform d [Homo sapi...   894   0.0  
Alignment   gi|NP_958816.1| amyloid beta A4 protein isoform b precursor [Ho...   894   0.0  
Alignment   gi|NP_000475.1| amyloid beta A4 protein isoform a precursor [Ho...   881   0.0  
Alignment   gi|NP_001129602.1| amyloid beta A4 protein isoform f precursor ...   881   0.0  
Alignment   gi|NP_001191231.1| amyloid beta A4 protein isoform i precursor ...   866   0.0  
Alignment   gi|NP_001191230.1| amyloid beta A4 protein isoform h precursor ...   854   0.0  
Alignment   gi|NP_001129603.1| amyloid beta A4 protein isoform g [Homo sapi...   567   e-161
Alignment   gi|NP_958817.1| amyloid beta A4 protein isoform c precursor [Ho...   567   e-161
Alignment   gi|NP_001129601.1| amyloid beta A4 protein isoform e precursor ...   567   e-161
Alignment   gi|NP_001191232.1| amyloid beta A4 protein isoform j precursor ...   540   e-153

>ref|NP_001129488.1| amyloid beta A4 protein isoform d [Homo sapiens].
          Length = 746

 Score =  894 bits (2309), Expect = 0.0
 Identities = 445/530 (83%), Positives = 446/530 (84%)
 Frame = +1

Query: 1    THTHIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 180
            TH H  IPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH
Sbjct: 102  THPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 161

Query: 181  DYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVV 360
            DYGMLLPCGIDKFRGVEFVCCPL                  VWWGGADTDYADGSEDKVV
Sbjct: 162  DYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVV 221

Query: 361  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXX 540
                                              PYEEATER                  
Sbjct: 222  EVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEV 281

Query: 541  XXXXCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVIP 720
                CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGS IP
Sbjct: 282  VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSAIP 341

Query: 721  TTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPK 900
            TTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPK
Sbjct: 342  TTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPK 401

Query: 901  ADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPP 1080
            ADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPP
Sbjct: 402  ADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPP 461

Query: 1081 RPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSL 1260
            RPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSL
Sbjct: 462  RPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSL 521

Query: 1261 SLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVE 1440
            SLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVE
Sbjct: 522  SLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVE 581

Query: 1441 LLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPCDARPCSRRRLTTRPG 1590
            LLPVNGEFSLDDLQPWH FG DSVPANTENEVEP DARP + R LTTRPG
Sbjct: 582  LLPVNGEFSLDDLQPWHSFGADSVPANTENEVEPVDARPAADRGLTTRPG 631


>ref|NP_958816.1| amyloid beta A4 protein isoform b precursor [Homo sapiens].
          Length = 751

 Score =  894 bits (2309), Expect = 0.0
 Identities = 445/530 (83%), Positives = 446/530 (84%)
 Frame = +1

Query: 1    THTHIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 180
            TH H  IPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH
Sbjct: 107  THPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 166

Query: 181  DYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVV 360
            DYGMLLPCGIDKFRGVEFVCCPL                  VWWGGADTDYADGSEDKVV
Sbjct: 167  DYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVV 226

Query: 361  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXX 540
                                              PYEEATER                  
Sbjct: 227  EVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEV 286

Query: 541  XXXXCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVIP 720
                CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGS IP
Sbjct: 287  VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSAIP 346

Query: 721  TTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPK 900
            TTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPK
Sbjct: 347  TTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPK 406

Query: 901  ADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPP 1080
            ADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPP
Sbjct: 407  ADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPP 466

Query: 1081 RPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSL 1260
            RPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSL
Sbjct: 467  RPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSL 526

Query: 1261 SLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVE 1440
            SLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVE
Sbjct: 527  SLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVE 586

Query: 1441 LLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPCDARPCSRRRLTTRPG 1590
            LLPVNGEFSLDDLQPWH FG DSVPANTENEVEP DARP + R LTTRPG
Sbjct: 587  LLPVNGEFSLDDLQPWHSFGADSVPANTENEVEPVDARPAADRGLTTRPG 636


>ref|NP_000475.1| amyloid beta A4 protein isoform a precursor [Homo sapiens].
          Length = 770

 Score =  881 bits (2277), Expect = 0.0
 Identities = 444/549 (80%), Positives = 446/549 (81%), Gaps = 19/549 (3%)
 Frame = +1

Query: 1    THTHIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 180
            TH H  IPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH
Sbjct: 107  THPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 166

Query: 181  DYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVV 360
            DYGMLLPCGIDKFRGVEFVCCPL                  VWWGGADTDYADGSEDKVV
Sbjct: 167  DYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVV 226

Query: 361  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXX 540
                                              PYEEATER                  
Sbjct: 227  EVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEV 286

Query: 541  XXXXCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSV-- 714
                CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGS   
Sbjct: 287  VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSAMS 346

Query: 715  -----------------IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM 843
                             +PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM
Sbjct: 347  QSLLKTTQEPLARDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM 406

Query: 844  SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN 1023
            SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN
Sbjct: 407  SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN 466

Query: 1024 DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI 1203
            DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI
Sbjct: 467  DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI 526

Query: 1204 RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI 1383
            RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI
Sbjct: 527  RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI 586

Query: 1384 SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPCDARPCS 1563
            SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWH FG DSVPANTENEVEP DARP +
Sbjct: 587  SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVPANTENEVEPVDARPAA 646

Query: 1564 RRRLTTRPG 1590
             R LTTRPG
Sbjct: 647  DRGLTTRPG 655


>ref|NP_001129602.1| amyloid beta A4 protein isoform f precursor [Homo sapiens].
          Length = 714

 Score =  881 bits (2277), Expect = 0.0
 Identities = 444/549 (80%), Positives = 446/549 (81%), Gaps = 19/549 (3%)
 Frame = +1

Query: 1    THTHIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 180
            TH H  IPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH
Sbjct: 51   THPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 110

Query: 181  DYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVV 360
            DYGMLLPCGIDKFRGVEFVCCPL                  VWWGGADTDYADGSEDKVV
Sbjct: 111  DYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVV 170

Query: 361  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXX 540
                                              PYEEATER                  
Sbjct: 171  EVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEV 230

Query: 541  XXXXCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSV-- 714
                CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGS   
Sbjct: 231  VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSAMS 290

Query: 715  -----------------IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM 843
                             +PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM
Sbjct: 291  QSLLKTTQEPLARDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM 350

Query: 844  SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN 1023
            SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN
Sbjct: 351  SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN 410

Query: 1024 DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI 1203
            DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI
Sbjct: 411  DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI 470

Query: 1204 RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI 1383
            RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI
Sbjct: 471  RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI 530

Query: 1384 SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPCDARPCS 1563
            SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWH FG DSVPANTENEVEP DARP +
Sbjct: 531  SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVPANTENEVEPVDARPAA 590

Query: 1564 RRRLTTRPG 1590
             R LTTRPG
Sbjct: 591  DRGLTTRPG 599


>ref|NP_001191231.1| amyloid beta A4 protein isoform i precursor [Homo sapiens].
          Length = 733

 Score =  866 bits (2238), Expect = 0.0
 Identities = 431/511 (84%), Positives = 431/511 (84%)
 Frame = +1

Query: 1    THTHIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 180
            TH H  IPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH
Sbjct: 107  THPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 166

Query: 181  DYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVV 360
            DYGMLLPCGIDKFRGVEFVCCPL                  VWWGGADTDYADGSEDKVV
Sbjct: 167  DYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVV 226

Query: 361  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXX 540
                                              PYEEATER                  
Sbjct: 227  EVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEV 286

Query: 541  XXXXCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVIP 720
                CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGS IP
Sbjct: 287  VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSAIP 346

Query: 721  TTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPK 900
            TTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPK
Sbjct: 347  TTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPK 406

Query: 901  ADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPP 1080
            ADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPP
Sbjct: 407  ADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPP 466

Query: 1081 RPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSL 1260
            RPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSL
Sbjct: 467  RPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSL 526

Query: 1261 SLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVE 1440
            SLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVE
Sbjct: 527  SLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVE 586

Query: 1441 LLPVNGEFSLDDLQPWHPFGVDSVPANTENE 1533
            LLPVNGEFSLDDLQPWH FG DSVPANTENE
Sbjct: 587  LLPVNGEFSLDDLQPWHSFGADSVPANTENE 617


>ref|NP_001191230.1| amyloid beta A4 protein isoform h precursor [Homo sapiens].
          Length = 752

 Score =  854 bits (2206), Expect = 0.0
 Identities = 430/530 (81%), Positives = 431/530 (81%), Gaps = 19/530 (3%)
 Frame = +1

Query: 1    THTHIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 180
            TH H  IPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH
Sbjct: 107  THPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 166

Query: 181  DYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVV 360
            DYGMLLPCGIDKFRGVEFVCCPL                  VWWGGADTDYADGSEDKVV
Sbjct: 167  DYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVV 226

Query: 361  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXX 540
                                              PYEEATER                  
Sbjct: 227  EVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEV 286

Query: 541  XXXXCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSV-- 714
                CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGS   
Sbjct: 287  VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSAMS 346

Query: 715  -----------------IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM 843
                             +PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM
Sbjct: 347  QSLLKTTQEPLARDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM 406

Query: 844  SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN 1023
            SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN
Sbjct: 407  SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN 466

Query: 1024 DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI 1203
            DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI
Sbjct: 467  DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI 526

Query: 1204 RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI 1383
            RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI
Sbjct: 527  RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI 586

Query: 1384 SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENE 1533
            SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWH FG DSVPANTENE
Sbjct: 587  SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVPANTENE 636


>ref|NP_001129603.1| amyloid beta A4 protein isoform g [Homo sapiens].
          Length = 660

 Score =  567 bits (1461), Expect = e-161
 Identities = 284/292 (97%), Positives = 286/292 (97%)
 Frame = +1

Query: 715  IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL 894
            +PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL
Sbjct: 254  VPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL 313

Query: 895  PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV 1074
            PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV
Sbjct: 314  PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV 373

Query: 1075 PPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ 1254
            PPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ
Sbjct: 374  PPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ 433

Query: 1255 SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTT 1434
            SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTT
Sbjct: 434  SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTT 493

Query: 1435 VELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPCDARPCSRRRLTTRPG 1590
            VELLPVNGEFSLDDLQPWH FG DSVPANTENEVEP DARP + R LTTRPG
Sbjct: 494  VELLPVNGEFSLDDLQPWHSFGADSVPANTENEVEPVDARPAADRGLTTRPG 545



 Score =  219 bits (558), Expect = 6e-57
 Identities = 107/162 (66%), Positives = 107/162 (66%)
 Frame = +1

Query: 1   THTHIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 180
           TH H  IPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH
Sbjct: 72  THPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 131

Query: 181 DYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVV 360
           DYGMLLPCGIDKFRGVEFVCCPL                  VWWGGADTDYADGSEDKVV
Sbjct: 132 DYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVV 191

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEATER 486
                                             PYEEATER
Sbjct: 192 EVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATER 233


>ref|NP_958817.1| amyloid beta A4 protein isoform c precursor [Homo sapiens].
          Length = 695

 Score =  567 bits (1461), Expect = e-161
 Identities = 284/292 (97%), Positives = 286/292 (97%)
 Frame = +1

Query: 715  IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL 894
            +PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL
Sbjct: 289  VPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL 348

Query: 895  PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV 1074
            PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV
Sbjct: 349  PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV 408

Query: 1075 PPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ 1254
            PPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ
Sbjct: 409  PPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ 468

Query: 1255 SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTT 1434
            SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTT
Sbjct: 469  SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTT 528

Query: 1435 VELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPCDARPCSRRRLTTRPG 1590
            VELLPVNGEFSLDDLQPWH FG DSVPANTENEVEP DARP + R LTTRPG
Sbjct: 529  VELLPVNGEFSLDDLQPWHSFGADSVPANTENEVEPVDARPAADRGLTTRPG 580



 Score =  219 bits (558), Expect = 6e-57
 Identities = 107/162 (66%), Positives = 107/162 (66%)
 Frame = +1

Query: 1   THTHIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 180
           TH H  IPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH
Sbjct: 107 THPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 166

Query: 181 DYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVV 360
           DYGMLLPCGIDKFRGVEFVCCPL                  VWWGGADTDYADGSEDKVV
Sbjct: 167 DYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVV 226

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEATER 486
                                             PYEEATER
Sbjct: 227 EVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATER 268


>ref|NP_001129601.1| amyloid beta A4 protein isoform e precursor [Homo sapiens].
          Length = 639

 Score =  567 bits (1461), Expect = e-161
 Identities = 284/292 (97%), Positives = 286/292 (97%)
 Frame = +1

Query: 715  IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL 894
            +PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL
Sbjct: 233  VPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL 292

Query: 895  PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV 1074
            PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV
Sbjct: 293  PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV 352

Query: 1075 PPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ 1254
            PPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ
Sbjct: 353  PPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ 412

Query: 1255 SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTT 1434
            SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTT
Sbjct: 413  SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTT 472

Query: 1435 VELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPCDARPCSRRRLTTRPG 1590
            VELLPVNGEFSLDDLQPWH FG DSVPANTENEVEP DARP + R LTTRPG
Sbjct: 473  VELLPVNGEFSLDDLQPWHSFGADSVPANTENEVEPVDARPAADRGLTTRPG 524



 Score =  219 bits (558), Expect = 6e-57
 Identities = 107/162 (66%), Positives = 107/162 (66%)
 Frame = +1

Query: 1   THTHIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 180
           TH H  IPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH
Sbjct: 51  THPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 110

Query: 181 DYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVV 360
           DYGMLLPCGIDKFRGVEFVCCPL                  VWWGGADTDYADGSEDKVV
Sbjct: 111 DYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVV 170

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEATER 486
                                             PYEEATER
Sbjct: 171 EVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATER 212


>ref|NP_001191232.1| amyloid beta A4 protein isoform j precursor [Homo sapiens].
          Length = 677

 Score =  540 bits (1390), Expect = e-153
 Identities = 270/273 (98%), Positives = 271/273 (99%)
 Frame = +1

Query: 715  IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL 894
            +PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL
Sbjct: 289  VPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL 348

Query: 895  PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV 1074
            PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV
Sbjct: 349  PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV 408

Query: 1075 PPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ 1254
            PPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ
Sbjct: 409  PPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ 468

Query: 1255 SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTT 1434
            SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTT
Sbjct: 469  SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTT 528

Query: 1435 VELLPVNGEFSLDDLQPWHPFGVDSVPANTENE 1533
            VELLPVNGEFSLDDLQPWH FG DSVPANTENE
Sbjct: 529  VELLPVNGEFSLDDLQPWHSFGADSVPANTENE 561



 Score =  219 bits (558), Expect = 6e-57
 Identities = 107/162 (66%), Positives = 107/162 (66%)
 Frame = +1

Query: 1   THTHIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 180
           TH H  IPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH
Sbjct: 107 THPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 166

Query: 181 DYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVV 360
           DYGMLLPCGIDKFRGVEFVCCPL                  VWWGGADTDYADGSEDKVV
Sbjct: 167 DYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWWGGADTDYADGSEDKVV 226

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEATER 486
                                             PYEEATER
Sbjct: 227 EVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATER 268


  Database: RefSeq49_HP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 18,297,164
  Number of sequences in database:  32,964
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 32964
Number of Hits to DB: 56,498,372
Number of extensions: 1435201
Number of successful extensions: 6251
Number of sequences better than 1.0e-05: 39
Number of HSP's gapped: 6113
Number of HSP's successfully gapped: 58
Length of query: 530
Length of database: 18,297,164
Length adjustment: 107
Effective length of query: 423
Effective length of database: 14,770,016
Effective search space: 6247716768
Effective search space used: 6247716768
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000068
         (1592 letters)

Database: RefSeq49_MP.fasta 
           30,036 sequences; 15,617,559 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_001185753.1| amyloid beta A4 protein isoform 3 precursor ...   897   0.0  
Alignment   gi|NP_001185752.1| amyloid beta A4 protein isoform 1 precursor ...   886   0.0  
Alignment   gi|NP_001185754.1| amyloid beta A4 protein isoform 5 precursor ...   870   0.0  
Alignment   gi|NP_001185755.1| amyloid beta A4 protein isoform 6 precursor ...   859   0.0  
Alignment   gi|NP_031497.2| amyloid beta A4 protein isoform 2 precursor [Mu...   570   e-162
Alignment   gi|NP_001095925.1| amyloid-like protein 2 isoform a [Mus muscul...   376   e-104
Alignment   gi|NP_033821.1| amyloid-like protein 2 isoform c [Mus musculus].     285   7e-77
Alignment   gi|NP_001095926.1| amyloid-like protein 2 isoform b [Mus muscul...   285   7e-77
Alignment   gi|NP_031493.2| amyloid-like protein 1 [Mus musculus].               208   8e-54
Alignment   gi|NP_035594.1| kunitz-type protease inhibitor 2 isoform a [Mus...    69   1e-11

>ref|NP_001185753.1| amyloid beta A4 protein isoform 3 precursor [Mus musculus].
          Length = 751

 Score =  897 bits (2318), Expect = 0.0
 Identities = 446/530 (84%), Positives = 447/530 (84%)
 Frame = +1

Query: 1    THTHIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 180
            THTHI IPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH
Sbjct: 107  THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 166

Query: 181  DYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVV 360
            DYGMLLPCGIDKFRGVEFVCCPL                  VWWGGADTDYADG EDKVV
Sbjct: 167  DYGMLLPCGIDKFRGVEFVCCPLAEESDSVDSADAEEDDSDVWWGGADTDYADGGEDKVV 226

Query: 361  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXX 540
                                              PYEEATER                  
Sbjct: 227  EVAEEEEVADVEEEEADDDEDVEDGDEVEEEAEEPYEEATERTTSTATTTTTTTESVEEV 286

Query: 541  XXXXCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVIP 720
                CSEQAETGPCRAMISRWYFDVTEGKC PFFYGGCGGNRNNFDTEEYCMAVCGSV P
Sbjct: 287  VREVCSEQAETGPCRAMISRWYFDVTEGKCVPFFYGGCGGNRNNFDTEEYCMAVCGSVFP 346

Query: 721  TTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPK 900
            TTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPK
Sbjct: 347  TTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPK 406

Query: 901  ADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPP 1080
            ADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPP
Sbjct: 407  ADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPP 466

Query: 1081 RPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSL 1260
            RP HVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSL
Sbjct: 467  RPHHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSL 526

Query: 1261 SLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVE 1440
            SLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVE
Sbjct: 527  SLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVE 586

Query: 1441 LLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPCDARPCSRRRLTTRPG 1590
            LLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEP DARP + R LTTRPG
Sbjct: 587  LLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPG 636


>ref|NP_001185752.1| amyloid beta A4 protein isoform 1 precursor [Mus musculus].
          Length = 770

 Score =  886 bits (2290), Expect = 0.0
 Identities = 446/549 (81%), Positives = 448/549 (81%), Gaps = 19/549 (3%)
 Frame = +1

Query: 1    THTHIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 180
            THTHI IPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH
Sbjct: 107  THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 166

Query: 181  DYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVV 360
            DYGMLLPCGIDKFRGVEFVCCPL                  VWWGGADTDYADG EDKVV
Sbjct: 167  DYGMLLPCGIDKFRGVEFVCCPLAEESDSVDSADAEEDDSDVWWGGADTDYADGGEDKVV 226

Query: 361  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXX 540
                                              PYEEATER                  
Sbjct: 227  EVAEEEEVADVEEEEADDDEDVEDGDEVEEEAEEPYEEATERTTSTATTTTTTTESVEEV 286

Query: 541  XXXXCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSV-- 714
                CSEQAETGPCRAMISRWYFDVTEGKC PFFYGGCGGNRNNFDTEEYCMAVCGSV  
Sbjct: 287  VREVCSEQAETGPCRAMISRWYFDVTEGKCVPFFYGGCGGNRNNFDTEEYCMAVCGSVST 346

Query: 715  -----------------IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM 843
                             +PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM
Sbjct: 347  QSLLKTTSEPLPQDPDKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM 406

Query: 844  SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN 1023
            SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN
Sbjct: 407  SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN 466

Query: 1024 DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI 1203
            DRRRLALENYITALQAVPPRP HVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI
Sbjct: 467  DRRRLALENYITALQAVPPRPHHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI 526

Query: 1204 RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI 1383
            RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI
Sbjct: 527  RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI 586

Query: 1384 SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPCDARPCS 1563
            SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEP DARP +
Sbjct: 587  SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAA 646

Query: 1564 RRRLTTRPG 1590
             R LTTRPG
Sbjct: 647  DRGLTTRPG 655


>ref|NP_001185754.1| amyloid beta A4 protein isoform 5 precursor [Mus musculus].
          Length = 733

 Score =  870 bits (2247), Expect = 0.0
 Identities = 432/511 (84%), Positives = 432/511 (84%)
 Frame = +1

Query: 1    THTHIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 180
            THTHI IPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH
Sbjct: 107  THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 166

Query: 181  DYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVV 360
            DYGMLLPCGIDKFRGVEFVCCPL                  VWWGGADTDYADG EDKVV
Sbjct: 167  DYGMLLPCGIDKFRGVEFVCCPLAEESDSVDSADAEEDDSDVWWGGADTDYADGGEDKVV 226

Query: 361  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXX 540
                                              PYEEATER                  
Sbjct: 227  EVAEEEEVADVEEEEADDDEDVEDGDEVEEEAEEPYEEATERTTSTATTTTTTTESVEEV 286

Query: 541  XXXXCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVIP 720
                CSEQAETGPCRAMISRWYFDVTEGKC PFFYGGCGGNRNNFDTEEYCMAVCGSV P
Sbjct: 287  VREVCSEQAETGPCRAMISRWYFDVTEGKCVPFFYGGCGGNRNNFDTEEYCMAVCGSVFP 346

Query: 721  TTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPK 900
            TTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPK
Sbjct: 347  TTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPK 406

Query: 901  ADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPP 1080
            ADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPP
Sbjct: 407  ADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPP 466

Query: 1081 RPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSL 1260
            RP HVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSL
Sbjct: 467  RPHHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSL 526

Query: 1261 SLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVE 1440
            SLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVE
Sbjct: 527  SLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVE 586

Query: 1441 LLPVNGEFSLDDLQPWHPFGVDSVPANTENE 1533
            LLPVNGEFSLDDLQPWHPFGVDSVPANTENE
Sbjct: 587  LLPVNGEFSLDDLQPWHPFGVDSVPANTENE 617


>ref|NP_001185755.1| amyloid beta A4 protein isoform 6 precursor [Mus musculus].
          Length = 752

 Score =  859 bits (2219), Expect = 0.0
 Identities = 432/530 (81%), Positives = 433/530 (81%), Gaps = 19/530 (3%)
 Frame = +1

Query: 1    THTHIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 180
            THTHI IPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH
Sbjct: 107  THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 166

Query: 181  DYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVV 360
            DYGMLLPCGIDKFRGVEFVCCPL                  VWWGGADTDYADG EDKVV
Sbjct: 167  DYGMLLPCGIDKFRGVEFVCCPLAEESDSVDSADAEEDDSDVWWGGADTDYADGGEDKVV 226

Query: 361  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXX 540
                                              PYEEATER                  
Sbjct: 227  EVAEEEEVADVEEEEADDDEDVEDGDEVEEEAEEPYEEATERTTSTATTTTTTTESVEEV 286

Query: 541  XXXXCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSV-- 714
                CSEQAETGPCRAMISRWYFDVTEGKC PFFYGGCGGNRNNFDTEEYCMAVCGSV  
Sbjct: 287  VREVCSEQAETGPCRAMISRWYFDVTEGKCVPFFYGGCGGNRNNFDTEEYCMAVCGSVST 346

Query: 715  -----------------IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM 843
                             +PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM
Sbjct: 347  QSLLKTTSEPLPQDPDKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM 406

Query: 844  SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN 1023
            SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN
Sbjct: 407  SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN 466

Query: 1024 DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI 1203
            DRRRLALENYITALQAVPPRP HVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI
Sbjct: 467  DRRRLALENYITALQAVPPRPHHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI 526

Query: 1204 RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI 1383
            RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI
Sbjct: 527  RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI 586

Query: 1384 SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENE 1533
            SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENE
Sbjct: 587  SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENE 636


>ref|NP_031497.2| amyloid beta A4 protein isoform 2 precursor [Mus musculus].
          Length = 695

 Score =  570 bits (1468), Expect = e-162
 Identities = 285/292 (97%), Positives = 287/292 (98%)
 Frame = +1

Query: 715  IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL 894
            +PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL
Sbjct: 289  VPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL 348

Query: 895  PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV 1074
            PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV
Sbjct: 349  PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV 408

Query: 1075 PPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ 1254
            PPRP HVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ
Sbjct: 409  PPRPHHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ 468

Query: 1255 SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTT 1434
            SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTT
Sbjct: 469  SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTT 528

Query: 1435 VELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPCDARPCSRRRLTTRPG 1590
            VELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEP DARP + R LTTRPG
Sbjct: 529  VELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPG 580



 Score =  221 bits (564), Expect = 1e-57
 Identities = 108/162 (66%), Positives = 108/162 (66%)
 Frame = +1

Query: 1   THTHIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 180
           THTHI IPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH
Sbjct: 107 THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 166

Query: 181 DYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVV 360
           DYGMLLPCGIDKFRGVEFVCCPL                  VWWGGADTDYADG EDKVV
Sbjct: 167 DYGMLLPCGIDKFRGVEFVCCPLAEESDSVDSADAEEDDSDVWWGGADTDYADGGEDKVV 226

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEATER 486
                                             PYEEATER
Sbjct: 227 EVAEEEEVADVEEEEADDDEDVEDGDEVEEEAEEPYEEATER 268


>ref|NP_001095925.1| amyloid-like protein 2 isoform a [Mus musculus].
          Length = 751

 Score =  376 bits (965), Expect = e-104
 Identities = 188/327 (57%), Positives = 241/327 (73%)
 Frame = +1

Query: 553  CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVIPTTAA 732
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC ++IP T  
Sbjct: 310  CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKAMIPPTPL 369

Query: 733  STPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKK 912
             T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V +EWEEAE QAKNLPK +++
Sbjct: 370  PTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKTERQ 428

Query: 913  AVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRH 1092
             +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR+ALENY+ ALQ+ PPRP  
Sbjct: 429  TLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRIALENYLAALQSDPPRPHR 488

Query: 1093 VFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLY 1272
            +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQVMTHL VI ER NQSLSLLY
Sbjct: 489  ILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLY 548

Query: 1273 NVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPV 1452
             VP VA+EIQ+E+DELLQ+++       A+M          D    S++E    V +   
Sbjct: 549  KVPYVAQEIQEEIDELLQEQR-------ADM----------DQFTSSISENPVDVRVSSE 591

Query: 1453 NGEFSLDDLQPWHPFGVDSVPANTENE 1533
              E  +    P HPF     P+ +ENE
Sbjct: 592  ESE-EIPPFHPLHPF-----PSLSENE 612



 Score =  129 bits (325), Expect = 5e-30
 Identities = 52/80 (65%), Positives = 63/80 (78%)
 Frame = +1

Query: 7   THIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDY 186
           +HI IP++CLVGEFVSD LLVPD C+F HQERM+VCE H  WHT+ KE C  +   L+ Y
Sbjct: 125 SHIVIPFKCLVGEFVSDVLLVPDNCQFFHQERMEVCEKHQRWHTLVKEACLTEGLTLYSY 184

Query: 187 GMLLPCGIDKFRGVEFVCCP 246
           GMLLPCG+D+F G E+VCCP
Sbjct: 185 GMLLPCGVDQFHGTEYVCCP 204


>ref|NP_033821.1| amyloid-like protein 2 isoform c [Mus musculus].
          Length = 695

 Score =  285 bits (729), Expect = 7e-77
 Identities = 151/273 (55%), Positives = 193/273 (70%)
 Frame = +1

Query: 715  IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL 894
            +P T   T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V +EWEEAE QAKNL
Sbjct: 308  VPPTPLPTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNL 366

Query: 895  PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV 1074
            PK +++ +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR+ALENY+ ALQ+ 
Sbjct: 367  PKTERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRIALENYLAALQSD 426

Query: 1075 PPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ 1254
            PPRP  +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQVMTHL VI ER NQ
Sbjct: 427  PPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQ 486

Query: 1255 SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTT 1434
            SLSLLY VP VA+EIQ+E+DELLQ+++       A+M          D    S++E    
Sbjct: 487  SLSLLYKVPYVAQEIQEEIDELLQEQR-------ADM----------DQFTSSISENPVD 529

Query: 1435 VELLPVNGEFSLDDLQPWHPFGVDSVPANTENE 1533
            V +     E  +    P HPF     P+ +ENE
Sbjct: 530  VRVSSEESE-EIPPFHPLHPF-----PSLSENE 556



 Score =  129 bits (325), Expect = 5e-30
 Identities = 52/80 (65%), Positives = 63/80 (78%)
 Frame = +1

Query: 7   THIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDY 186
           +HI IP++CLVGEFVSD LLVPD C+F HQERM+VCE H  WHT+ KE C  +   L+ Y
Sbjct: 125 SHIVIPFKCLVGEFVSDVLLVPDNCQFFHQERMEVCEKHQRWHTLVKEACLTEGLTLYSY 184

Query: 187 GMLLPCGIDKFRGVEFVCCP 246
           GMLLPCG+D+F G E+VCCP
Sbjct: 185 GMLLPCGVDQFHGTEYVCCP 204


>ref|NP_001095926.1| amyloid-like protein 2 isoform b [Mus musculus].
          Length = 707

 Score =  285 bits (729), Expect = 7e-77
 Identities = 151/273 (55%), Positives = 193/273 (70%)
 Frame = +1

Query: 715  IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL 894
            +P T   T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V +EWEEAE QAKNL
Sbjct: 308  VPPTPLPTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNL 366

Query: 895  PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV 1074
            PK +++ +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR+ALENY+ ALQ+ 
Sbjct: 367  PKTERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRIALENYLAALQSD 426

Query: 1075 PPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ 1254
            PPRP  +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQVMTHL VI ER NQ
Sbjct: 427  PPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQ 486

Query: 1255 SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTT 1434
            SLSLLY VP VA+EIQ+E+DELLQ+++       A+M          D    S++E    
Sbjct: 487  SLSLLYKVPYVAQEIQEEIDELLQEQR-------ADM----------DQFTSSISENPVD 529

Query: 1435 VELLPVNGEFSLDDLQPWHPFGVDSVPANTENE 1533
            V +     E  +    P HPF     P+ +ENE
Sbjct: 530  VRVSSEESE-EIPPFHPLHPF-----PSLSENE 556



 Score =  129 bits (325), Expect = 5e-30
 Identities = 52/80 (65%), Positives = 63/80 (78%)
 Frame = +1

Query: 7   THIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDY 186
           +HI IP++CLVGEFVSD LLVPD C+F HQERM+VCE H  WHT+ KE C  +   L+ Y
Sbjct: 125 SHIVIPFKCLVGEFVSDVLLVPDNCQFFHQERMEVCEKHQRWHTLVKEACLTEGLTLYSY 184

Query: 187 GMLLPCGIDKFRGVEFVCCP 246
           GMLLPCG+D+F G E+VCCP
Sbjct: 185 GMLLPCGVDQFHGTEYVCCP 204


>ref|NP_031493.2| amyloid-like protein 1 [Mus musculus].
          Length = 654

 Score =  208 bits (530), Expect = 8e-54
 Identities = 100/197 (50%), Positives = 144/197 (73%)
 Frame = +1

Query: 742  DAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVI 921
            D VD Y   PG+  EH  F +AK  LE +   ++++VMREW  A+ Q+KNLPKAD++A+ 
Sbjct: 296  DGVDVYFGMPGEIGEHEGFLRAKMDLEERRMRQINEVMREWAMADSQSKNLPKADRQALN 355

Query: 922  QHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFN 1101
            +HFQ  +++LE++ + ERQ+LVETH  RV A++ND+RR ALE ++ ALQ  PP+   V  
Sbjct: 356  EHFQSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQGDPPQAERVLM 415

Query: 1102 MLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVP 1281
             L++Y+RAEQK+++HTL+H++HV  VDP+KA Q+R QV THL+VI ERMNQSL LL   P
Sbjct: 416  ALRRYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVQTHLQVIEERMNQSLGLLDQNP 475

Query: 1282 AVAEEIQDEVDELLQKE 1332
             +A+E++ ++ ELL  E
Sbjct: 476  HLAQELRPQIQELLLAE 492



 Score =  112 bits (281), Expect = 6e-25
 Identities = 49/79 (62%), Positives = 59/79 (74%)
 Frame = +1

Query: 10  HIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYG 189
           H  +P+ CL GEFVS+ALLVP+ C+FLHQERMD CE+    H  A+E CS +   LH  G
Sbjct: 133 HEVVPFHCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRHQEAQEACSSQGLILHGSG 192

Query: 190 MLLPCGIDKFRGVEFVCCP 246
           MLLPCG D+FRGVE+VCCP
Sbjct: 193 MLLPCGSDRFRGVEYVCCP 211


>ref|NP_035594.1| kunitz-type protease inhibitor 2 isoform a [Mus musculus].
          Length = 252

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 26/58 (44%), Positives = 35/58 (60%)
 Frame = +1

Query: 553 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVIPTT 726
           C      G CRA I RW++++T+G C PF YGGC GN NN+ ++E C+  C  V   T
Sbjct: 38  CGVSKVVGKCRASIPRWWYNITDGSCQPFVYGGCEGNGNNYQSKEECLDKCAGVTENT 95



 Score = 65.9 bits (159), Expect = 9e-11
 Identities = 25/51 (49%), Positives = 33/51 (64%)
 Frame = +1

Query: 553 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 705
           C  +A TGPCRA   RWY+D  +  C  F YGGC GN+N++ ++E CM  C
Sbjct: 133 CVPKAVTGPCRAAFPRWYYDTEKNSCISFIYGGCRGNKNSYLSQEACMQHC 183


  Database: RefSeq49_MP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 15,617,559
  Number of sequences in database:  30,036
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 30036
Number of Hits to DB: 48,223,279
Number of extensions: 1229425
Number of successful extensions: 5441
Number of sequences better than 1.0e-05: 32
Number of HSP's gapped: 5360
Number of HSP's successfully gapped: 45
Length of query: 530
Length of database: 15,617,559
Length adjustment: 106
Effective length of query: 424
Effective length of database: 12,433,743
Effective search space: 5271907032
Effective search space used: 5271907032
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 36 (18.5 bits)

BLASTX 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000068
         (1592 letters)

Database: RefSeq49_SP.fasta 
           24,897 sequences; 11,343,932 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Alignment   gi|NP_999537.1| amyloid beta A4 protein [Sus scrofa].                891   0.0  
Alignment   gi|XP_003358940.1| PREDICTED: amyloid beta A4 protein-like [Sus...   642   0.0  
Alignment   gi|XP_003357409.1| PREDICTED: amyloid-like protein 2, partial [...   380   e-105
Alignment   gi|XP_003127129.1| PREDICTED: amyloid-like protein 1-like [Sus ...   114   2e-25
Alignment   gi|XP_003359739.1| PREDICTED: collagen alpha-3(VI) chain [Sus s...    69   1e-11
Alignment   gi|XP_001928130.2| PREDICTED: collagen alpha-3(VI) chain isofor...    69   1e-11
Alignment   gi|XP_001928122.2| PREDICTED: collagen alpha-3(VI) chain isofor...    69   1e-11
Alignment   gi|XP_003127156.1| PREDICTED: kunitz-type protease inhibitor 2-...    67   4e-11
Alignment   gi|NP_001157478.1| protein AMBP precursor [Sus scrofa].               61   2e-09
Alignment   gi|NP_001128730.1| hypothetical protein LOC100155068 [Sus scrof...    61   2e-09

>ref|NP_999537.1| amyloid beta A4 protein [Sus scrofa].
          Length = 770

 Score =  891 bits (2303), Expect = 0.0
 Identities = 449/549 (81%), Positives = 451/549 (82%), Gaps = 19/549 (3%)
 Frame = +1

Query: 1    THTHIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 180
            THTHI IPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH
Sbjct: 107  THTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLH 166

Query: 181  DYGMLLPCGIDKFRGVEFVCCPLXXXXXXXXXXXXXXXXXXVWWGGADTDYADGSEDKVV 360
            DYGMLLPCGIDKFRGVEFVCCPL                  VWWGGADTDYADGSEDKVV
Sbjct: 167  DYGMLLPCGIDKFRGVEFVCCPLAEESDNIDSADAEEDDSDVWWGGADTDYADGSEDKVV 226

Query: 361  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYEEATERXXXXXXXXXXXXXXXXXX 540
                                              PYEEATER                  
Sbjct: 227  EVAEEEEVADVEEEEAEDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEV 286

Query: 541  XXXXCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSV-- 714
                CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSV  
Sbjct: 287  VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMS 346

Query: 715  -----------------IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM 843
                             +PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM
Sbjct: 347  QSLLKTTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERM 406

Query: 844  SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN 1023
            SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN
Sbjct: 407  SQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLN 466

Query: 1024 DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI 1203
            DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI
Sbjct: 467  DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQI 526

Query: 1204 RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI 1383
            RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI
Sbjct: 527  RSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRI 586

Query: 1384 SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPCDARPCS 1563
            SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEP DARP +
Sbjct: 587  SYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAA 646

Query: 1564 RRRLTTRPG 1590
             R LTTRPG
Sbjct: 647  DRGLTTRPG 655


>ref|XP_003358940.1| PREDICTED: amyloid beta A4 protein-like [Sus scrofa].
          Length = 422

 Score =  642 bits (1657), Expect = 0.0
 Identities = 324/350 (92%), Positives = 325/350 (92%), Gaps = 19/350 (5%)
 Frame = +1

Query: 553  CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSV------ 714
            CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSV      
Sbjct: 6    CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLL 65

Query: 715  -------------IPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVM 855
                         +PTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVM
Sbjct: 66   KTTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVM 125

Query: 856  REWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRR 1035
            REWEEAERQAKNLPKADKKAVIQ    KVESLEQEAANERQQLVETHMARVEAMLNDRRR
Sbjct: 126  REWEEAERQAKNLPKADKKAVIQ----KVESLEQEAANERQQLVETHMARVEAMLNDRRR 181

Query: 1036 LALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQV 1215
            LALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQV
Sbjct: 182  LALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQV 241

Query: 1216 MTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGN 1395
            MTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGN
Sbjct: 242  MTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGN 301

Query: 1396 DALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPC 1545
            DALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEV  C
Sbjct: 302  DALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVNIC 351


>ref|XP_003357409.1| PREDICTED: amyloid-like protein 2, partial [Sus scrofa].
          Length = 744

 Score =  380 bits (976), Expect = e-105
 Identities = 191/329 (58%), Positives = 245/329 (74%)
 Frame = +1

Query: 553  CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVIPTTAA 732
            CS++A TGPCRA++ RWYFD+++GKC  F YGGCGGNRNNF++E+YCMAVC ++IP T  
Sbjct: 317  CSQEALTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCKAMIPPTPL 376

Query: 733  STPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKK 912
             T D VD Y ET  D+NEHA FQKAKE+LE +HR RM +V +EWEEAE QAKNLPKA+++
Sbjct: 377  PTND-VDVYFETSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQ 435

Query: 913  AVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRH 1092
             +IQHFQ  V++LE+EAA+E+QQLVETH+ARVEAMLNDRRR+ALENY+ ALQA PPRP  
Sbjct: 436  TLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLNDRRRVALENYLAALQADPPRPHR 495

Query: 1093 VFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLY 1272
            +   L++YVRAE KDR HT++H++HV  VDP+KAAQ++SQVMTHL VI ER NQSLSLLY
Sbjct: 496  ILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLY 555

Query: 1273 NVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPV 1452
             VP VA+EIQ+E+DELLQ+++       A+M          D    S++ET   V +   
Sbjct: 556  KVPYVAQEIQEEIDELLQEQR-------ADM----------DQFTASISETPVDVRVSSE 598

Query: 1453 NGEFSLDDLQPWHPFGVDSVPANTENEVE 1539
              +  +  L P HPF   S+P N + + E
Sbjct: 599  ESD-EMPPLYPLHPF--PSLPENEDPQPE 624



 Score =  130 bits (328), Expect = 2e-30
 Identities = 52/80 (65%), Positives = 64/80 (80%)
 Frame = +1

Query: 7   THIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDY 186
           +H+ IP +CLVGEFVSD LLVP+KC+F H+ERM+VCE H HWHTV KE C  +   L+ Y
Sbjct: 125 SHVVIPSKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVVKEACLTQGMTLYSY 184

Query: 187 GMLLPCGIDKFRGVEFVCCP 246
           GMLLPCG+D+F G E+VCCP
Sbjct: 185 GMLLPCGVDQFHGTEYVCCP 204


>ref|XP_003127129.1| PREDICTED: amyloid-like protein 1-like [Sus scrofa].
          Length = 181

 Score =  114 bits (284), Expect = 2e-25
 Identities = 49/79 (62%), Positives = 60/79 (75%)
 Frame = +1

Query: 10  HIAIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYG 189
           H  +P+RCL GEFVS+ALLVP+ C+FLHQERMD CE+    H  A+E C+ +   LH  G
Sbjct: 79  HQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRHQEAQEACNSQGLILHGSG 138

Query: 190 MLLPCGIDKFRGVEFVCCP 246
           MLLPCG D+FRGVE+VCCP
Sbjct: 139 MLLPCGADRFRGVEYVCCP 157


>ref|XP_003359739.1| PREDICTED: collagen alpha-3(VI) chain [Sus scrofa].
          Length = 2571

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 27/55 (49%), Positives = 33/55 (60%)
 Frame = +1

Query: 553  CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVI 717
            C    + G CR  I +WY D   G CA F+YGGCGGN N FD++E C  VC  V+
Sbjct: 2506 CKLPKDGGTCRKFIIKWYHDAVTGNCARFWYGGCGGNENRFDSQEECEKVCSPVL 2560


>ref|XP_001928130.2| PREDICTED: collagen alpha-3(VI) chain isoform 2 [Sus scrofa].
          Length = 2972

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 27/55 (49%), Positives = 33/55 (60%)
 Frame = +1

Query: 553  CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVI 717
            C    + G CR  I +WY D   G CA F+YGGCGGN N FD++E C  VC  V+
Sbjct: 2907 CKLPKDGGTCRKFIIKWYHDAVTGNCARFWYGGCGGNENRFDSQEECEKVCSPVL 2961


>ref|XP_001928122.2| PREDICTED: collagen alpha-3(VI) chain isoform 1 [Sus scrofa].
          Length = 3178

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 27/55 (49%), Positives = 33/55 (60%)
 Frame = +1

Query: 553  CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVI 717
            C    + G CR  I +WY D   G CA F+YGGCGGN N FD++E C  VC  V+
Sbjct: 3113 CKLPKDGGTCRKFIIKWYHDAVTGNCARFWYGGCGGNENRFDSQEECEKVCSPVL 3167


>ref|XP_003127156.1| PREDICTED: kunitz-type protease inhibitor 2-like isoform 1 [Sus
           scrofa].
          Length = 252

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 28/58 (48%), Positives = 35/58 (60%)
 Frame = +1

Query: 553 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVIPTT 726
           C      G CRA I RW+++VT G C  F YGGC GN NN+ T+E C+A C  V  +T
Sbjct: 38  CQVPKVVGRCRASIPRWWYNVTGGSCQQFVYGGCEGNDNNYMTKEECLAKCAGVTEST 95



 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 25/51 (49%), Positives = 34/51 (66%)
 Frame = +1

Query: 553 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 705
           C+ +A TGPCRA   RWYF+  +  C  F YGGC GN+N++ ++E CM  C
Sbjct: 133 CTAKAVTGPCRAAFPRWYFNAEKNSCDKFIYGGCRGNKNSYHSKEECMQRC 183


>ref|NP_001157478.1| protein AMBP precursor [Sus scrofa].
          Length = 352

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 25/52 (48%), Positives = 29/52 (55%)
 Frame = +1

Query: 553 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 708
           CS    +GPCR     W FD  +GKC  F YGGC GN N F +E+ C   CG
Sbjct: 287 CSLPIVSGPCRGFFQLWAFDAVQGKCVLFNYGGCQGNGNQFYSEKECKEYCG 338



 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 22/54 (40%), Positives = 31/54 (57%)
 Frame = +1

Query: 553 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSV 714
           C      GPC  MI R++++ +   C  F YGGC GN NNF +E+ C+  C +V
Sbjct: 231 CQLGYSQGPCLGMIKRYFYNGSSMACETFHYGGCMGNGNNFVSEKECLQTCRTV 284


>ref|NP_001128730.1| hypothetical protein LOC100155068 [Sus scrofa].
          Length = 303

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 22/51 (43%), Positives = 35/51 (68%)
 Frame = +1

Query: 553 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 705
           C+ +A+ GPC+AM+ R++F++   +C  F YGGC GN+N F++ E C   C
Sbjct: 50  CAMKADDGPCKAMMKRFFFNINTQQCEEFIYGGCEGNQNRFESLEECKEKC 100



 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 23/51 (45%), Positives = 32/51 (62%)
 Frame = +1

Query: 553 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 705
           C   A+ G C+A   R+Y++   GKC PF Y GCGGN NNF +++ C+  C
Sbjct: 216 CLTPADRGLCQANERRFYYNSVIGKCRPFKYSGCGGNENNFTSKKACLKTC 266



 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 20/51 (39%), Positives = 30/51 (58%)
 Frame = +1

Query: 553 CSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 705
           C  + + G CR  I+R++++    +C  F YGGC GN NNF++ E C   C
Sbjct: 123 CFLEEDAGICRGYITRYFYNNQSKQCERFKYGGCLGNLNNFESLEECKNTC 173


  Database: RefSeq49_SP.fasta
    Posted date:  Oct 17, 2011  1:42 PM
  Number of letters in database: 11,343,932
  Number of sequences in database:  24,897
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24897
Number of Hits to DB: 37,002,148
Number of extensions: 1163939
Number of successful extensions: 3902
Number of sequences better than 1.0e-05: 20
Number of HSP's gapped: 3845
Number of HSP's successfully gapped: 25
Length of query: 530
Length of database: 11,343,932
Length adjustment: 104
Effective length of query: 426
Effective length of database: 8,754,644
Effective search space: 3729478344
Effective search space used: 3729478344
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 35 (18.1 bits)

BLASTN 2.2.24 [Aug-08-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 20110601C-000068
         (1592 letters)

Database: Sscrofa_10.2.fasta 
           4582 sequences; 2,808,509,378 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Sscrofa_Chr13                                                         442   e-121
gb|GL895340.2| Sus scrofa unplaced genomic scaffold ChrUScaf3224      170   1e-39
Sscrofa_Chr09                                                          74   3e-10

>Sscrofa_Chr13 
||          Length = 218635234

 Score =  442 bits (223), Expect = e-121
 Identities = 223/223 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1312      gatgagctgctgcagaaagagcaaaactactcggatgatgtcttggccaacatgatcagc 1371
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199323023 gatgagctgctgcagaaagagcaaaactactcggatgatgtcttggccaacatgatcagc 199322964

                                                                             
Query: 1372      gaaccgaggatcagttatggaaacgatgctctcatgccgtctctgactgaaaccaaaacc 1431
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199322963 gaaccgaggatcagttatggaaacgatgctctcatgccgtctctgactgaaaccaaaacc 199322904

                                                                             
Query: 1432      accgtggagcttcttcctgtgaatggagagttcagcctggatgatctccagccctggcat 1491
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199322903 accgtggagcttcttcctgtgaatggagagttcagcctggatgatctccagccctggcat 199322844

                                                            
Query: 1492      ccttttggggtagactctgtgcctgccaacacagaaaatgaag 1534
                 |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199322843 ccttttggggtagactctgtgcctgccaacacagaaaatgaag 199322801



 Score =  389 bits (196), Expect = e-105
 Identities = 196/196 (100%)
 Strand = Plus / Minus

                                                                             
Query: 149       agacctgtagtgagaagagtacgaacttgcatgactatggcatgttgctgccctgtggaa 208
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199474141 agacctgtagtgagaagagtacgaacttgcatgactatggcatgttgctgccctgtggaa 199474082

                                                                             
Query: 209       ttgacaagttccgaggggtggagtttgtgtgttgcccactggccgaggaaagtgacaata 268
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199474081 ttgacaagttccgaggggtggagtttgtgtgttgcccactggccgaggaaagtgacaata 199474022

                                                                             
Query: 269       tcgactcagcagatgcagaagaggatgactcggacgtctggtggggtggagcagatacag 328
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199474021 tcgactcagcagatgcagaagaggatgactcggacgtctggtggggtggagcagatacag 199473962

                                 
Query: 329       actatgcagatggcag 344
                 ||||||||||||||||
Sbjct: 199473961 actatgcagatggcag 199473946



 Score =  337 bits (170), Expect = 1e-89
 Identities = 170/170 (100%)
 Strand = Plus / Minus

                                                                             
Query: 546       agaggtgtgctctgaacaagccgagacggggccgtgccgagcaatgatctcccgctggta 605
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199420005 agaggtgtgctctgaacaagccgagacggggccgtgccgagcaatgatctcccgctggta 199419946

                                                                             
Query: 606       ctttgatgtgactgaagggaagtgcgccccgttcttttacggcggatgtggcggcaaccg 665
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199419945 ctttgatgtgactgaagggaagtgcgccccgttcttttacggcggatgtggcggcaaccg 199419886

                                                                   
Query: 666       aaacaactttgacacagaggaatactgcatggccgtgtgtggcagcgtca 715
                 ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199419885 aaacaactttgacacagaggaatactgcatggccgtgtgtggcagcgtca 199419836



 Score =  325 bits (164), Expect = 4e-86
 Identities = 167/168 (99%)
 Strand = Plus / Minus

                                                                             
Query: 916       gtgatccagcatttccaggagaaagtggagtctctggagcaggaagcagccaacgagagg 975
                 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199380167 gtgatgcagcatttccaggagaaagtggagtctctggagcaggaagcagccaacgagagg 199380108

                                                                             
Query: 976       cagcagttggtggagacgcacatggccagagtggaggccatgcttaacgaccgccggcgc 1035
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199380107 cagcagttggtggagacgcacatggccagagtggaggccatgcttaacgaccgccggcgc 199380048

                                                                 
Query: 1036      ctggccctggagaattacatcacggctcttcaggctgttcctcctcgg 1083
                 ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199380047 ctggccctggagaattacatcacggctcttcaggctgttcctcctcgg 199380000



 Score =  270 bits (136), Expect = 2e-69
 Identities = 136/136 (100%)
 Strand = Plus / Minus

                                                                             
Query: 716       ttcctacaacagcagccagcaccccagatgccgttgacaagtatcttgagacacctggag 775
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199385121 ttcctacaacagcagccagcaccccagatgccgttgacaagtatcttgagacacctggag 199385062

                                                                             
Query: 776       atgagaacgaacatgcgcatttccagaaagccaaagagaggctggaggccaagcaccgcg 835
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199385061 atgagaacgaacatgcgcatttccagaaagccaaagagaggctggaggccaagcaccgcg 199385002

                                 
Query: 836       agagaatgtcccaggt 851
                 ||||||||||||||||
Sbjct: 199385001 agagaatgtcccaggt 199384986



 Score =  262 bits (132), Expect = 5e-67
 Identities = 132/132 (100%)
 Strand = Plus / Minus

                                                                             
Query: 1083      gcctcgtcatgtgttcaacatgctcaagaagtatgtccgtgccgaacagaaagacagaca 1142
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199362640 gcctcgtcatgtgttcaacatgctcaagaagtatgtccgtgccgaacagaaagacagaca 199362581

                                                                             
Query: 1143      gcacaccctaaagcattttgaacacgttcgcatggtagatccaaagaaagctgctcagat 1202
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199362580 gcacaccctaaagcattttgaacacgttcgcatggtagatccaaagaaagctgctcagat 199362521

                             
Query: 1203      ccgatcccaggt 1214
                 ||||||||||||
Sbjct: 199362520 ccgatcccaggt 199362509



 Score =  230 bits (116), Expect = 2e-57
 Identities = 116/116 (100%)
 Strand = Plus / Minus

                                                                             
Query: 35        tagttggcgagtttgtaagcgatgccctccttgttccggacaagtgcaagttcttacacc 94
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199476108 tagttggcgagtttgtaagcgatgccctccttgttccggacaagtgcaagttcttacacc 199476049

                                                                         
Query: 95        aggagaggatggatgtttgcgaaacccaccttcactggcacactgtggccaaagag 150
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199476048 aggagaggatggatgtttgcgaaacccaccttcactggcacactgtggccaaagag 199475993



 Score =  206 bits (104), Expect = 3e-50
 Identities = 107/108 (99%)
 Strand = Plus / Minus

                                                                             
Query: 1210      caggttatgacacacctccgtgtgatttacgagcgcatgaaccagtctctctccctgctc 1269
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199361680 caggttatgacacacctccgtgtgatttacgagcgcatgaaccagtctctctccctgctc 199361621

                                                                 
Query: 1270      tacaacgttcctgctgtggctgaggaaattcaggatgaagttgatgag 1317
                 ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 199361620 tacaacgttcctgctgtggctgaggaaattcaggatgaagttggtgag 199361573



 Score =  155 bits (78), Expect = 9e-35
 Identities = 78/78 (100%)
 Strand = Plus / Minus

                                                                             
Query: 847       caggtcatgagagagtgggaagaggcagaacgtcaagcaaagaacttgcctaaagctgat 906
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199380932 caggtcatgagagagtgggaagaggcagaacgtcaagcaaagaacttgcctaaagctgat 199380873

                                   
Query: 907       aagaaagcagtgatccag 924
                 ||||||||||||||||||
Sbjct: 199380872 aagaaagcagtgatccag 199380855



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                      
Query: 1         acccacactcacattgcgattccgtaccgctgcttag 37
                 |||||||||||||||| ||||||||||||||||||||
Sbjct: 199484694 acccacactcacattgtgattccgtaccgctgcttag 199484658


>gb|GL895340.2| Sus scrofa unplaced genomic scaffold ChrUScaf3224
          Length = 24765

 Score =  170 bits (86), Expect = 1e-39
 Identities = 86/86 (100%)
 Strand = Plus / Plus

                                                                         
Query: 766   acacctggagatgagaacgaacatgcgcatttccagaaagccaaagagaggctggaggcc 825
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10648 acacctggagatgagaacgaacatgcgcatttccagaaagccaaagagaggctggaggcc 10707

                                       
Query: 826   aagcaccgcgagagaatgtcccaggt 851
             ||||||||||||||||||||||||||
Sbjct: 10708 aagcaccgcgagagaatgtcccaggt 10733



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                               
Query: 716   ttcctacaacagcagccagcaccccagatgccgt 749
             ||||||||||||||||||||||||| ||||||||
Sbjct: 10514 ttcctacaacagcagccagcaccccggatgccgt 10547


>Sscrofa_Chr09 
||          Length = 153670197

 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 85/101 (84%)
 Strand = Plus / Plus

                                                                            
Query: 949      ctggagcaggaagcagccaacgagaggcagcagttggtggagacgcacatggccagagtg 1008
                |||||| |||||||||||| ||||| ||||||| ||||||| || ||| | ||  | |||
Sbjct: 63020480 ctggagaaggaagcagccagcgagaagcagcagctggtggaaacccacctcgcgcgggtg 63020539

                                                         
Query: 1009     gaggccatgcttaacgaccgccggcgcctggccctggagaa 1049
                ||||||||||| ||||||||||| ||  |||| ||||||||
Sbjct: 63020540 gaggccatgctcaacgaccgccgccgggtggcgctggagaa 63020580


  Database: Sscrofa_10.2.fasta
    Posted date:  Nov 16, 2011 10:34 AM
  Number of letters in database: 2,808,509,378
  Number of sequences in database:  4582
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4582
Number of Hits to DB: 37,693,895
Number of extensions: 278
Number of successful extensions: 278
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 277
Number of HSP's successfully gapped: 13
Length of query: 1592
Length of database: 2,808,509,378
Length adjustment: 22
Effective length of query: 1570
Effective length of database: 2,808,408,574
Effective search space: 4409201461180
Effective search space used: 4409201461180
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 18 (36.2 bits)
S2: 30 (60.0 bits)